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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: TAPBP (CAeditome ID:6892)

Gene summary for TAPBP

check button Gene summary
Gene informationGene symbol

TAPBP

Gene ID

6892

Gene nameTAP binding protein
SynonymsNGS17|TAPA|TPN|TPSN
Cytomap

6p21.32

Type of geneprotein-coding
DescriptiontapasinNGS-17TAP binding protein (tapasin)TAP-associated protein
Modification date20210518
UniProtAcc

O15533

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
TAPBP

GO:0046978

Tapasin

22638925

TAPBP

GO:0046979

Tapasin

22638925

TAPBP

GO:0062061

Tapasin

17947644

TAPBP

GO:0061635

Tapasin

18802093

TAPBP

GO:0065003

Tapasin

17947644

TAPBP

GO:0000139

Tapasin

11884415

TAPBP

GO:0005789

Tapasin

11884415

TAPBP

GO:0042824

Tapasin

17947644

TAPBP

GO:0042824

Tapasin

21263072


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RNA A-to-I events for TAPBP

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000231925.10
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_469541(33300405, -), CAediting_469542(33300419, -), CAediting_469543(33300468, -), CAediting_469544(33300472, -), CAediting_469545(33300494, -), CAediting_469546(33300497, -), CAediting_469547(33300539, -), CAediting_469548(33300549, -), CAediting_469549(33300561, -), CAediting_469550(33300709, -), CAediting_469551(33300776, -), CAediting_469552(33300844, -), CAediting_469553(33300854, -), CAediting_469554(33300858, -), CAediting_469555(33301317, -), CAediting_469556(33301329, -), CAediting_469557(33301331, -), CAediting_469558(33301339, -), CAediting_469559(33301391, -), CAediting_469560(33301408, -), CAediting_469561(33301411, -), CAediting_469562(33301452, -), CAediting_469563(33301462, -), CAediting_469564(33301487, -), CAediting_469565(33301488, -), CAediting_469566(33301492, -), CAediting_469567(33301511, -), CAediting_469568(33301512, -), CAediting_469569(33301517, -), CAediting_469570(33301527, -), CAediting_469571(33301530, -), CAediting_469572(33301536, -), CAediting_469573(33301560, -), CAediting_469574(33301570, -), CAediting_469575(33301572, -), CAediting_469576(33302160, -), CAediting_469577(33302173, -), CAediting_469578(33302179, -), CAediting_469579(33302180, -), CAediting_469580(33302213, -), CAediting_469581(33302254, -), CAediting_469582(33302257, -), CAediting_469583(33302266, -), CAediting_469584(33302284, -), CAediting_469585(33302286, -), CAediting_469586(33302382, -), CAediting_469587(33302385, -), CAediting_469588(33302392, -), CAediting_469589(33302397, -), CAediting_469590(33302401, -), CAediting_469591(33302421, -), CAediting_469592(33302422, -), CAediting_469593(33302430, -), CAediting_469594(33302436, -), CAediting_469595(33302453, -), CAediting_469596(33302457, -), CAediting_469597(33302462, -), CAediting_469598(33302463, -), CAediting_469599(33302489, -), CAediting_469600(33302506, -), CAediting_469601(33302520, -), CAediting_469602(33302521, -), CAediting_469603(33302530, -), CAediting_469604(33302531, -), CAediting_469605(33302545, -), CAediting_469606(33302546, -), CAediting_469607(33302564, -), CAediting_469608(33302577, -), CAediting_469609(33302599, -), CAediting_469610(33302600, -), CAediting_469611(33302608, -), CAediting_469612(33302622, -), CAediting_469613(33302639, -), CAediting_469614(33302641, -), CAediting_469615(33302645, -), CAediting_469616(33302647, -), CAediting_469617(33302706, -), CAediting_469618(33302708, -), CAediting_469619(33302711, -), CAediting_469620(33302722, -), CAediting_469621(33302731, -), CAediting_469622(33302742, -), CAediting_469623(33302743, -), CAediting_469624(33302751, -), CAediting_469625(33302754, -), CAediting_469626(33302757, -), CAediting_469627(33302767, -), CAediting_469628(33302774, -), CAediting_469629(33302783, -), CAediting_469630(33302784, -), CAediting_469631(33302790, -), CAediting_469632(33302802, -), CAediting_469633(33302806, -), CAediting_469634(33302810, -), CAediting_469635(33302811, -), CAediting_469636(33302812, -), CAediting_469637(33302813, -), CAediting_469638(33302816, -), CAediting_469639(33302818, -), CAediting_469640(33302819, -), CAediting_469641(33302820, -), CAediting_469642(33302821, -), CAediting_469643(33302822, -), CAediting_469644(33302825, -), CAediting_469645(33302831, -), CAediting_469646(33302836, -), CAediting_469647(33302838, -), CAediting_469648(33302856, -), CAediting_469649(33302861, -), CAediting_469650(33302862, -), CAediting_469651(33302870, -), CAediting_469652(33302880, -), CAediting_469653(33302893, -), CAediting_469654(33302915, -), CAediting_469655(33302916, -), CAediting_469656(33302924, -), CAediting_469657(33302931, -), CAediting_469658(33303149, -), CAediting_469659(33303157, -), CAediting_469660(33303159, -), CAediting_469661(33303171, -), CAediting_469662(33303172, -), CAediting_469663(33303173, -), CAediting_469664(33303214, -), CAediting_469665(33303215, -), CAediting_469666(33303227, -), CAediting_469667(33303236, -), CAediting_469668(33303239, -), CAediting_469669(33303253, -), CAediting_469670(33303262, -), CAediting_469671(33303291, -), CAediting_469672(33303295, -), CAediting_469673(33303297, -), CAediting_469674(33303307, -), CAediting_469675(33303310, -), CAediting_469676(33303319, -), CAediting_469677(33303336, -), CAediting_469678(33303337, -), CAediting_469679(33303343, -), CAediting_469680(33303350, -), CAediting_469681(33303356, -), CAediting_469682(33303357, -), CAediting_469683(33303372, -), CAediting_469684(33303380, -), CAediting_469685(33303393, -), CAediting_469686(33303407, -), CAediting_469687(33303409, -), CAediting_469688(33303413, -), CAediting_469689(33306712, -), CAediting_469690(33306713, -), CAediting_469691(33306716, -), CAediting_469692(33306734, -), CAediting_469693(33306735, -), CAediting_469694(33306775, -), CAediting_469695(33306776, -), CAediting_469696(33306813, -), CAediting_469697(33306816, -), CAediting_469698(33306856, -), CAediting_469699(33306892, -), CAediting_469700(33306895, -), CAediting_469701(33307031, -), CAediting_469702(33307053, -), CAediting_469703(33307083, -), CAediting_469704(33307084, -), CAediting_469705(33307096, -), CAediting_469706(33307116, -), CAediting_469707(33307125, -), CAediting_469708(33307172, -), CAediting_469709(33307176, -), CAediting_469710(33307179, -), CAediting_469711(33307180, -), CAediting_469712(33307188, -), CAediting_469713(33307201, -), CAediting_469714(33307205, -), CAediting_469715(33307206, -), CAediting_469716(33307212, -), CAediting_469717(33307244, -), CAediting_469718(33307274, -), CAediting_469719(33307433, -), CAediting_469720(33307444, -), CAediting_469721(33307456, -), CAediting_469722(33307462, -), CAediting_469723(33307469, -), CAediting_469724(33307470, -), CAediting_469725(33307478, -), CAediting_469726(33307487, -), CAediting_469727(33307498, -), CAediting_469728(33307499, -), CAediting_469729(33307504, -), CAediting_469730(33307510, -), CAediting_469731(33307513, -), CAediting_469732(33307526, -), CAediting_469733(33307530, -), CAediting_469734(33307534, -), CAediting_469735(33307539, -), CAediting_469736(33307558, -), CAediting_469737(33307566, -), CAediting_469738(33307569, -), CAediting_469739(33307580, -), CAediting_469740(33307584, -), CAediting_469741(33307590, -), CAediting_469742(33307595, -), CAediting_469743(33307596, -), CAediting_469744(33307597, -), CAediting_469745(33307605, -), CAediting_469746(33307620, -), CAediting_469747(33307621, -), CAediting_469748(33307639, -), CAediting_469749(33307648, -), CAediting_469750(33307651, -), CAediting_469751(33307652, -), CAediting_469752(33307653, -), CAediting_469753(33307656, -), CAediting_469754(33307674, -), CAediting_469755(33307683, -), CAediting_469756(33308066, -), CAediting_469757(33308078, -), CAediting_469758(33308088, -), CAediting_469759(33308118, -), CAediting_469760(33308131, -), CAediting_469761(33308160, -), CAediting_469762(33308214, -), CAediting_469763(33308216, -), CAediting_469764(33308252, -), CAediting_469765(33308255, -), CAediting_469766(33308256, -), CAediting_469767(33308281, -), CAediting_469768(33308299, -), CAediting_469769(33309138, -), CAediting_469770(33309150, -), CAediting_469771(33309178, -), CAediting_469772(33309184, -), CAediting_469773(33309192, -), CAediting_469774(33309220, -), CAediting_469775(33309223, -), CAediting_469776(33309229, -), CAediting_469777(33309236, -), CAediting_469778(33309237, -), CAediting_469779(33309261, -), CAediting_469780(33309263, -), CAediting_469781(33309273, -), CAediting_469782(33309277, -), CAediting_469783(33309285, -), CAediting_469784(33309302, -), CAediting_469785(33309309, -), CAediting_469786(33309322, -), CAediting_469787(33309325, -), CAediting_469788(33309346, -), CAediting_469789(33309444, -), CAediting_469790(33309445, -), CAediting_469791(33309456, -), CAediting_469792(33309461, -), CAediting_469793(33309486, -), CAediting_469794(33309538, -), CAediting_469795(33309684, -), CAediting_469796(33309688, -), CAediting_469797(33309759, -), CAediting_469798(33309760, -), CAediting_469799(33309793, -), CAediting_469800(33309835, -), CAediting_469801(33309836, -), CAediting_469802(33309862, -), CAediting_469803(33309885, -), CAediting_469804(33309889, -), CAediting_469805(33309894, -), CAediting_469806(33309897, -), CAediting_469807(33309917, -), CAediting_469808(33309918, -), CAediting_469809(33309942, -), CAediting_469810(33309943, -), CAediting_469811(33309956, -), CAediting_469812(33309966, -), CAediting_469813(33309996, -), CAediting_469814(33309997, -), CAediting_469815(33310056, -), CAediting_469816(33310057, -), CAediting_469817(33310061, -), CAediting_469818(33310062, -), CAediting_469819(33310077, -), CAediting_469820(33310085, -), CAediting_469821(33310108, -), CAediting_469822(33310122, -), CAediting_469823(33310262, -), CAediting_469824(33310318, -), CAediting_469825(33310323, -), CAediting_469826(33310362, -), CAediting_469827(33310384, -), CAediting_469828(33310406, -), CAediting_469829(33310419, -), CAediting_469830(33310459, -), CAediting_469831(33310574, -), CAediting_469832(33310671, -), CAediting_469833(33310697, -), CAediting_469834(33310702, -), CAediting_469835(33310707, -), CAediting_469836(33310719, -), CAediting_469837(33310736, -), CAediting_469838(33310830, -), CAediting_469839(33311194, -), CAediting_469840(33311204, -), CAediting_469841(33311319, -), CAediting_469842(33311456, -), CAediting_469843(33311542, -), CAediting_469844(33311628, -),

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RNA editing positional annotations for TAPBP using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_469541chr6_33300405_-UTR3
CAediting_469542chr6_33300419_-UTR3
CAediting_469543chr6_33300468_-UTR3
CAediting_469544chr6_33300472_-UTR3
CAediting_469545chr6_33300494_-UTR3
CAediting_469546chr6_33300497_-UTR3
CAediting_469547chr6_33300539_-UTR3
CAediting_469548chr6_33300549_-UTR3
CAediting_469549chr6_33300561_-UTR3
CAediting_469550chr6_33300709_-UTR3
CAediting_469551chr6_33300776_-UTR3
CAediting_469552chr6_33300844_-UTR3
CAediting_469553chr6_33300854_-UTR3
CAediting_469554chr6_33300858_-UTR3
CAediting_469555chr6_33301317_-UTR3
CAediting_469556chr6_33301329_-UTR3
CAediting_469557chr6_33301331_-UTR3
CAediting_469558chr6_33301339_-UTR3
CAediting_469559chr6_33301391_-UTR3
CAediting_469560chr6_33301408_-UTR3
CAediting_469561chr6_33301411_-UTR3
CAediting_469562chr6_33301452_-UTR3
CAediting_469563chr6_33301462_-UTR3
CAediting_469564chr6_33301487_-UTR3
CAediting_469565chr6_33301488_-UTR3
CAediting_469566chr6_33301492_-UTR3
CAediting_469567chr6_33301511_-UTR3
CAediting_469568chr6_33301512_-UTR3
CAediting_469569chr6_33301517_-UTR3
CAediting_469570chr6_33301527_-UTR3
CAediting_469571chr6_33301530_-UTR3
CAediting_469572chr6_33301536_-UTR3
CAediting_469573chr6_33301560_-UTR3
CAediting_469574chr6_33301570_-UTR3
CAediting_469575chr6_33301572_-UTR3
CAediting_469576chr6_33302160_-intronic
CAediting_469577chr6_33302173_-intronic
CAediting_469578chr6_33302179_-intronic
CAediting_469579chr6_33302180_-intronic
CAediting_469580chr6_33302213_-intronic
CAediting_469581chr6_33302254_-intronic
CAediting_469582chr6_33302257_-intronic
CAediting_469583chr6_33302266_-intronic
CAediting_469584chr6_33302284_-intronic
CAediting_469585chr6_33302286_-intronic
CAediting_469586chr6_33302382_-intronic
CAediting_469587chr6_33302385_-intronic
CAediting_469588chr6_33302392_-intronic
CAediting_469589chr6_33302397_-intronic
CAediting_469590chr6_33302401_-intronic
CAediting_469591chr6_33302421_-intronic
CAediting_469592chr6_33302422_-intronic
CAediting_469593chr6_33302430_-intronic
CAediting_469594chr6_33302436_-intronic
CAediting_469595chr6_33302453_-intronic
CAediting_469596chr6_33302457_-intronic
CAediting_469597chr6_33302462_-intronic
CAediting_469598chr6_33302463_-intronic
CAediting_469599chr6_33302489_-intronic
CAediting_469600chr6_33302506_-intronic
CAediting_469601chr6_33302520_-intronic
CAediting_469602chr6_33302521_-intronic
CAediting_469603chr6_33302530_-intronic
CAediting_469604chr6_33302531_-intronic
CAediting_469605chr6_33302545_-intronic
CAediting_469606chr6_33302546_-intronic
CAediting_469607chr6_33302564_-intronic
CAediting_469608chr6_33302577_-intronic
CAediting_469609chr6_33302599_-intronic
CAediting_469610chr6_33302600_-intronic
CAediting_469611chr6_33302608_-intronic
CAediting_469612chr6_33302622_-intronic
CAediting_469613chr6_33302639_-intronic
CAediting_469614chr6_33302641_-intronic
CAediting_469615chr6_33302645_-intronic
CAediting_469616chr6_33302647_-intronic
CAediting_469617chr6_33302706_-intronic
CAediting_469618chr6_33302708_-intronic
CAediting_469619chr6_33302711_-intronic
CAediting_469620chr6_33302722_-intronic
CAediting_469621chr6_33302731_-intronic
CAediting_469622chr6_33302742_-intronic
CAediting_469623chr6_33302743_-intronic
CAediting_469624chr6_33302751_-intronic
CAediting_469625chr6_33302754_-intronic
CAediting_469626chr6_33302757_-intronic
CAediting_469627chr6_33302767_-intronic
CAediting_469628chr6_33302774_-intronic
CAediting_469629chr6_33302783_-intronic
CAediting_469630chr6_33302784_-intronic
CAediting_469631chr6_33302790_-intronic
CAediting_469632chr6_33302802_-intronic
CAediting_469633chr6_33302806_-intronic
CAediting_469634chr6_33302810_-intronic
CAediting_469635chr6_33302811_-intronic
CAediting_469636chr6_33302812_-intronic
CAediting_469637chr6_33302813_-intronic
CAediting_469638chr6_33302816_-intronic
CAediting_469639chr6_33302818_-intronic
CAediting_469640chr6_33302819_-intronic
CAediting_469641chr6_33302820_-intronic
CAediting_469642chr6_33302821_-intronic
CAediting_469643chr6_33302822_-intronic
CAediting_469644chr6_33302825_-intronic
CAediting_469645chr6_33302831_-intronic
CAediting_469646chr6_33302836_-intronic
CAediting_469647chr6_33302838_-intronic
CAediting_469648chr6_33302856_-intronic
CAediting_469649chr6_33302861_-intronic
CAediting_469650chr6_33302862_-intronic
CAediting_469651chr6_33302870_-intronic
CAediting_469652chr6_33302880_-intronic
CAediting_469653chr6_33302893_-intronic
CAediting_469654chr6_33302915_-intronic
CAediting_469655chr6_33302916_-intronic
CAediting_469656chr6_33302924_-intronic
CAediting_469657chr6_33302931_-intronic
CAediting_469658chr6_33303149_-intronic
CAediting_469659chr6_33303157_-intronic
CAediting_469660chr6_33303159_-intronic
CAediting_469661chr6_33303171_-intronic
CAediting_469662chr6_33303172_-intronic
CAediting_469663chr6_33303173_-intronic
CAediting_469664chr6_33303214_-intronic
CAediting_469665chr6_33303215_-intronic
CAediting_469666chr6_33303227_-intronic
CAediting_469667chr6_33303236_-intronic
CAediting_469668chr6_33303239_-intronic
CAediting_469669chr6_33303253_-intronic
CAediting_469670chr6_33303262_-intronic
CAediting_469671chr6_33303291_-intronic
CAediting_469672chr6_33303295_-intronic
CAediting_469673chr6_33303297_-intronic
CAediting_469674chr6_33303307_-intronic
CAediting_469675chr6_33303310_-intronic
CAediting_469676chr6_33303319_-intronic
CAediting_469677chr6_33303336_-intronic
CAediting_469678chr6_33303337_-intronic
CAediting_469679chr6_33303343_-intronic
CAediting_469680chr6_33303350_-intronic
CAediting_469681chr6_33303356_-intronic
CAediting_469682chr6_33303357_-intronic
CAediting_469683chr6_33303372_-intronic
CAediting_469684chr6_33303380_-intronic
CAediting_469685chr6_33303393_-intronic
CAediting_469686chr6_33303407_-intronic
CAediting_469687chr6_33303409_-intronic
CAediting_469688chr6_33303413_-intronic
CAediting_469689chr6_33306712_-ncRNA_intronic
CAediting_469690chr6_33306713_-ncRNA_intronic
CAediting_469691chr6_33306716_-ncRNA_intronic
CAediting_469692chr6_33306734_-ncRNA_intronic
CAediting_469693chr6_33306735_-ncRNA_intronic
CAediting_469694chr6_33306775_-ncRNA_intronic
CAediting_469695chr6_33306776_-ncRNA_intronic
CAediting_469696chr6_33306813_-ncRNA_intronic
CAediting_469697chr6_33306816_-ncRNA_intronic
CAediting_469698chr6_33306856_-ncRNA_intronic
CAediting_469699chr6_33306892_-ncRNA_intronic
CAediting_469700chr6_33306895_-ncRNA_intronic
CAediting_469701chr6_33307031_-ncRNA_intronic
CAediting_469702chr6_33307053_-ncRNA_intronic
CAediting_469703chr6_33307083_-ncRNA_intronic
CAediting_469704chr6_33307084_-ncRNA_intronic
CAediting_469705chr6_33307096_-ncRNA_intronic
CAediting_469706chr6_33307116_-ncRNA_intronic
CAediting_469707chr6_33307125_-ncRNA_intronic
CAediting_469708chr6_33307172_-ncRNA_intronic
CAediting_469709chr6_33307176_-ncRNA_intronic
CAediting_469710chr6_33307179_-ncRNA_intronic
CAediting_469711chr6_33307180_-ncRNA_intronic
CAediting_469712chr6_33307188_-ncRNA_intronic
CAediting_469713chr6_33307201_-ncRNA_intronic
CAediting_469714chr6_33307205_-ncRNA_intronic
CAediting_469715chr6_33307206_-ncRNA_intronic
CAediting_469716chr6_33307212_-ncRNA_intronic
CAediting_469717chr6_33307244_-ncRNA_intronic
CAediting_469718chr6_33307274_-ncRNA_intronic
CAediting_469719chr6_33307433_-ncRNA_intronic
CAediting_469720chr6_33307444_-ncRNA_intronic
CAediting_469721chr6_33307456_-ncRNA_intronic
CAediting_469722chr6_33307462_-ncRNA_intronic
CAediting_469723chr6_33307469_-ncRNA_intronic
CAediting_469724chr6_33307470_-ncRNA_intronic
CAediting_469725chr6_33307478_-ncRNA_intronic
CAediting_469726chr6_33307487_-ncRNA_intronic
CAediting_469727chr6_33307498_-ncRNA_intronic
CAediting_469728chr6_33307499_-ncRNA_intronic
CAediting_469729chr6_33307504_-ncRNA_intronic
CAediting_469730chr6_33307510_-ncRNA_intronic
CAediting_469731chr6_33307513_-ncRNA_intronic
CAediting_469732chr6_33307526_-ncRNA_intronic
CAediting_469733chr6_33307530_-ncRNA_intronic
CAediting_469734chr6_33307534_-ncRNA_intronic
CAediting_469735chr6_33307539_-ncRNA_intronic
CAediting_469736chr6_33307558_-ncRNA_intronic
CAediting_469737chr6_33307566_-ncRNA_intronic
CAediting_469738chr6_33307569_-ncRNA_intronic
CAediting_469739chr6_33307580_-ncRNA_intronic
CAediting_469740chr6_33307584_-ncRNA_intronic
CAediting_469741chr6_33307590_-ncRNA_intronic
CAediting_469742chr6_33307595_-ncRNA_intronic
CAediting_469743chr6_33307596_-ncRNA_intronic
CAediting_469744chr6_33307597_-ncRNA_intronic
CAediting_469745chr6_33307605_-ncRNA_intronic
CAediting_469746chr6_33307620_-ncRNA_intronic
CAediting_469747chr6_33307621_-ncRNA_intronic
CAediting_469748chr6_33307639_-ncRNA_intronic
CAediting_469749chr6_33307648_-ncRNA_intronic
CAediting_469750chr6_33307651_-ncRNA_intronic
CAediting_469751chr6_33307652_-ncRNA_intronic
CAediting_469752chr6_33307653_-ncRNA_intronic
CAediting_469753chr6_33307656_-ncRNA_intronic
CAediting_469754chr6_33307674_-ncRNA_intronic
CAediting_469755chr6_33307683_-ncRNA_intronic
CAediting_469756chr6_33308066_-ncRNA_intronic
CAediting_469757chr6_33308078_-ncRNA_intronic
CAediting_469758chr6_33308088_-ncRNA_intronic
CAediting_469759chr6_33308118_-exonic
CAediting_469760chr6_33308131_-exonic
CAediting_469761chr6_33308160_-splicing
CAediting_469762chr6_33308214_-ncRNA_intronic
CAediting_469763chr6_33308216_-ncRNA_intronic
CAediting_469764chr6_33308252_-ncRNA_intronic
CAediting_469765chr6_33308255_-ncRNA_intronic
CAediting_469766chr6_33308256_-ncRNA_intronic
CAediting_469767chr6_33308281_-ncRNA_intronic
CAediting_469768chr6_33308299_-ncRNA_intronic
CAediting_469769chr6_33309138_-ncRNA_intronic
CAediting_469770chr6_33309150_-ncRNA_intronic
CAediting_469771chr6_33309178_-ncRNA_intronic
CAediting_469772chr6_33309184_-ncRNA_intronic
CAediting_469773chr6_33309192_-ncRNA_intronic
CAediting_469774chr6_33309220_-ncRNA_intronic
CAediting_469775chr6_33309223_-ncRNA_intronic
CAediting_469776chr6_33309229_-ncRNA_intronic
CAediting_469777chr6_33309236_-ncRNA_intronic
CAediting_469778chr6_33309237_-ncRNA_intronic
CAediting_469779chr6_33309261_-ncRNA_intronic
CAediting_469780chr6_33309263_-ncRNA_intronic
CAediting_469781chr6_33309273_-ncRNA_intronic
CAediting_469782chr6_33309277_-ncRNA_intronic
CAediting_469783chr6_33309285_-ncRNA_intronic
CAediting_469784chr6_33309302_-ncRNA_intronic
CAediting_469785chr6_33309309_-ncRNA_intronic
CAediting_469786chr6_33309322_-ncRNA_intronic
CAediting_469787chr6_33309325_-ncRNA_intronic
CAediting_469788chr6_33309346_-ncRNA_intronic
CAediting_469789chr6_33309444_-ncRNA_intronic
CAediting_469790chr6_33309445_-ncRNA_intronic
CAediting_469791chr6_33309456_-ncRNA_intronic
CAediting_469792chr6_33309461_-ncRNA_intronic
CAediting_469793chr6_33309486_-ncRNA_intronic
CAediting_469794chr6_33309538_-ncRNA_intronic
CAediting_469795chr6_33309684_-ncRNA_intronic
CAediting_469796chr6_33309688_-ncRNA_intronic
CAediting_469797chr6_33309759_-ncRNA_intronic
CAediting_469798chr6_33309760_-ncRNA_intronic
CAediting_469799chr6_33309793_-ncRNA_intronic
CAediting_469800chr6_33309835_-ncRNA_intronic
CAediting_469801chr6_33309836_-ncRNA_intronic
CAediting_469802chr6_33309862_-ncRNA_intronic
CAediting_469803chr6_33309885_-ncRNA_intronic
CAediting_469804chr6_33309889_-ncRNA_intronic
CAediting_469805chr6_33309894_-ncRNA_intronic
CAediting_469806chr6_33309897_-ncRNA_intronic
CAediting_469807chr6_33309917_-ncRNA_intronic
CAediting_469808chr6_33309918_-ncRNA_intronic
CAediting_469809chr6_33309942_-ncRNA_intronic
CAediting_469810chr6_33309943_-ncRNA_intronic
CAediting_469811chr6_33309956_-ncRNA_intronic
CAediting_469812chr6_33309966_-ncRNA_intronic
CAediting_469813chr6_33309996_-ncRNA_intronic
CAediting_469814chr6_33309997_-ncRNA_intronic
CAediting_469815chr6_33310056_-ncRNA_intronic
CAediting_469816chr6_33310057_-ncRNA_intronic
CAediting_469817chr6_33310061_-ncRNA_intronic
CAediting_469818chr6_33310062_-ncRNA_intronic
CAediting_469819chr6_33310077_-ncRNA_intronic
CAediting_469820chr6_33310085_-ncRNA_intronic
CAediting_469821chr6_33310108_-ncRNA_intronic
CAediting_469822chr6_33310122_-ncRNA_intronic
CAediting_469823chr6_33310262_-ncRNA_intronic
CAediting_469824chr6_33310318_-ncRNA_intronic
CAediting_469825chr6_33310323_-ncRNA_intronic
CAediting_469826chr6_33310362_-ncRNA_intronic
CAediting_469827chr6_33310384_-ncRNA_intronic
CAediting_469828chr6_33310406_-ncRNA_intronic
CAediting_469829chr6_33310419_-ncRNA_intronic
CAediting_469830chr6_33310459_-ncRNA_intronic
CAediting_469831chr6_33310574_-ncRNA_intronic
CAediting_469832chr6_33310671_-ncRNA_intronic
CAediting_469833chr6_33310697_-ncRNA_intronic
CAediting_469834chr6_33310702_-ncRNA_intronic
CAediting_469835chr6_33310707_-ncRNA_intronic
CAediting_469836chr6_33310719_-ncRNA_intronic
CAediting_469837chr6_33310736_-ncRNA_intronic
CAediting_469838chr6_33310830_-ncRNA_intronic
CAediting_469839chr6_33311194_-ncRNA_intronic
CAediting_469840chr6_33311204_-ncRNA_intronic
CAediting_469841chr6_33311319_-ncRNA_intronic
CAediting_469842chr6_33311456_-ncRNA_intronic
CAediting_469843chr6_33311542_-ncRNA_intronic
CAediting_469844chr6_33311628_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_469541chr6_33300405_-SINEAluAluY
CAediting_469542chr6_33300419_-SINEAluAluY
CAediting_469543chr6_33300468_-SINEAluAluY
CAediting_469544chr6_33300472_-SINEAluAluY
CAediting_469545chr6_33300494_-SINEAluAluY
CAediting_469546chr6_33300497_-SINEAluAluY
CAediting_469547chr6_33300539_-SINEAluAluY
CAediting_469548chr6_33300549_-SINEAluAluY
CAediting_469549chr6_33300561_-SINEAluAluY
CAediting_469550chr6_33300709_-SINEAluAluY
CAediting_469551chr6_33300776_-SINEAluAluY
CAediting_469552chr6_33300844_-SINEAluAluY
CAediting_469553chr6_33300854_-SINEAluAluY
CAediting_469554chr6_33300858_-SINEAluAluY
CAediting_469555chr6_33301317_-SINEAluAluSx
CAediting_469556chr6_33301329_-SINEAluAluSx
CAediting_469557chr6_33301331_-SINEAluAluSx
CAediting_469558chr6_33301339_-SINEAluAluSx
CAediting_469559chr6_33301391_-SINEAluAluSx
CAediting_469560chr6_33301408_-SINEAluAluSx
CAediting_469561chr6_33301411_-SINEAluAluSx
CAediting_469562chr6_33301452_-SINEAluAluSx
CAediting_469563chr6_33301462_-SINEAluAluSx
CAediting_469564chr6_33301487_-SINEAluAluSx
CAediting_469565chr6_33301488_-SINEAluAluSx
CAediting_469566chr6_33301492_-SINEAluAluSx
CAediting_469567chr6_33301511_-SINEAluAluSx
CAediting_469568chr6_33301512_-SINEAluAluSx
CAediting_469569chr6_33301517_-SINEAluAluSx
CAediting_469570chr6_33301527_-SINEAluAluSx
CAediting_469571chr6_33301530_-SINEAluAluSx
CAediting_469572chr6_33301536_-SINEAluAluSx
CAediting_469573chr6_33301560_-SINEAluAluSx
CAediting_469574chr6_33301570_-SINEAluAluSx
CAediting_469575chr6_33301572_-SINEAluAluSx
CAediting_469576chr6_33302160_-SINEAluAluJb
CAediting_469577chr6_33302173_-SINEAluAluJb
CAediting_469578chr6_33302179_-SINEAluAluJb
CAediting_469579chr6_33302180_-SINEAluAluJb
CAediting_469580chr6_33302213_-SINEAluAluJb
CAediting_469581chr6_33302254_-SINEAluAluJb
CAediting_469582chr6_33302257_-SINEAluAluJb
CAediting_469583chr6_33302266_-SINEAluAluJb
CAediting_469584chr6_33302284_-SINEAluAluJb
CAediting_469585chr6_33302286_-SINEAluAluJb
CAediting_469586chr6_33302382_-SINEAluAluSx
CAediting_469587chr6_33302385_-SINEAluAluSx
CAediting_469588chr6_33302392_-SINEAluAluSx
CAediting_469589chr6_33302397_-SINEAluAluSx
CAediting_469590chr6_33302401_-SINEAluAluSx
CAediting_469591chr6_33302421_-SINEAluAluSx
CAediting_469592chr6_33302422_-SINEAluAluSx
CAediting_469593chr6_33302430_-SINEAluAluSx
CAediting_469594chr6_33302436_-SINEAluAluSx
CAediting_469595chr6_33302453_-SINEAluAluSx
CAediting_469596chr6_33302457_-SINEAluAluSx
CAediting_469597chr6_33302462_-SINEAluAluSx
CAediting_469598chr6_33302463_-SINEAluAluSx
CAediting_469599chr6_33302489_-SINEAluAluSx
CAediting_469600chr6_33302506_-SINEAluAluSx
CAediting_469601chr6_33302520_-SINEAluAluSx
CAediting_469602chr6_33302521_-SINEAluAluSx
CAediting_469603chr6_33302530_-SINEAluAluSx
CAediting_469604chr6_33302531_-SINEAluAluSx
CAediting_469605chr6_33302545_-SINEAluAluSx
CAediting_469606chr6_33302546_-SINEAluAluSx
CAediting_469607chr6_33302564_-SINEAluAluSx
CAediting_469608chr6_33302577_-SINEAluAluSx
CAediting_469609chr6_33302599_-SINEAluAluSx
CAediting_469610chr6_33302600_-SINEAluAluSx
CAediting_469611chr6_33302608_-SINEAluAluSx
CAediting_469612chr6_33302622_-SINEAluAluSx
CAediting_469613chr6_33302639_-SINEAluAluSq2
CAediting_469614chr6_33302641_-SINEAluAluSq2
CAediting_469615chr6_33302645_-SINEAluAluSq2
CAediting_469616chr6_33302647_-SINEAluAluSq2
CAediting_469617chr6_33302706_-SINEAluAluSq2
CAediting_469618chr6_33302708_-SINEAluAluSq2
CAediting_469619chr6_33302711_-SINEAluAluSq2
CAediting_469620chr6_33302722_-SINEAluAluSq2
CAediting_469621chr6_33302731_-SINEAluAluSq2
CAediting_469622chr6_33302742_-SINEAluAluSq2
CAediting_469623chr6_33302743_-SINEAluAluSq2
CAediting_469624chr6_33302751_-SINEAluAluSq2
CAediting_469625chr6_33302754_-SINEAluAluSq2
CAediting_469626chr6_33302757_-SINEAluAluSq2
CAediting_469627chr6_33302767_-SINEAluAluSq2
CAediting_469628chr6_33302774_-SINEAluAluSq2
CAediting_469629chr6_33302783_-SINEAluAluSq2
CAediting_469630chr6_33302784_-SINEAluAluSq2
CAediting_469631chr6_33302790_-SINEAluAluSq2
CAediting_469632chr6_33302802_-SINEAluAluSq2
CAediting_469633chr6_33302806_-SINEAluAluSq2
CAediting_469634chr6_33302810_-SINEAluAluSq2
CAediting_469635chr6_33302811_-SINEAluAluSq2
CAediting_469636chr6_33302812_-SINEAluAluSq2
CAediting_469637chr6_33302813_-SINEAluAluSq2
CAediting_469638chr6_33302816_-SINEAluAluSq2
CAediting_469639chr6_33302818_-SINEAluAluSq2
CAediting_469640chr6_33302819_-SINEAluAluSq2
CAediting_469641chr6_33302820_-SINEAluAluSq2
CAediting_469642chr6_33302821_-SINEAluAluSq2
CAediting_469643chr6_33302822_-SINEAluAluSq2
CAediting_469644chr6_33302825_-SINEAluAluSq2
CAediting_469645chr6_33302831_-SINEAluAluSq2
CAediting_469646chr6_33302836_-SINEAluAluSq2
CAediting_469647chr6_33302838_-SINEAluAluSq2
CAediting_469648chr6_33302856_-SINEAluAluSq2
CAediting_469649chr6_33302861_-SINEAluAluSq2
CAediting_469650chr6_33302862_-SINEAluAluSq2
CAediting_469651chr6_33302870_-SINEAluAluSq2
CAediting_469652chr6_33302880_-SINEAluAluSq2
CAediting_469653chr6_33302893_-SINEAluAluSq2
CAediting_469654chr6_33302915_-SINEAluAluSq2
CAediting_469655chr6_33302916_-SINEAluAluSq2
CAediting_469656chr6_33302924_-SINEAluAluSq2
CAediting_469657chr6_33302931_-SINEAluAluSq2
CAediting_469658chr6_33303149_-SINEAluAluSx1
CAediting_469659chr6_33303157_-SINEAluAluSx1
CAediting_469660chr6_33303159_-SINEAluAluSx1
CAediting_469661chr6_33303171_-SINEAluAluSx1
CAediting_469662chr6_33303172_-SINEAluAluSx1
CAediting_469663chr6_33303173_-SINEAluAluSx1
CAediting_469664chr6_33303214_-SINEAluAluSx1
CAediting_469665chr6_33303215_-SINEAluAluSx1
CAediting_469666chr6_33303227_-SINEAluAluSx1
CAediting_469667chr6_33303236_-SINEAluAluSx1
CAediting_469668chr6_33303239_-SINEAluAluSx1
CAediting_469669chr6_33303253_-SINEAluAluSx1
CAediting_469670chr6_33303262_-SINEAluAluSx1
CAediting_469671chr6_33303291_-SINEAluAluSx1
CAediting_469672chr6_33303295_-SINEAluAluSx1
CAediting_469673chr6_33303297_-SINEAluAluSx1
CAediting_469674chr6_33303307_-SINEAluAluSx1
CAediting_469675chr6_33303310_-SINEAluAluSx1
CAediting_469676chr6_33303319_-SINEAluAluSx1
CAediting_469677chr6_33303336_-SINEAluAluSx1
CAediting_469678chr6_33303337_-SINEAluAluSx1
CAediting_469679chr6_33303343_-SINEAluAluSx1
CAediting_469680chr6_33303350_-SINEAluAluSx1
CAediting_469681chr6_33303356_-SINEAluAluSx1
CAediting_469682chr6_33303357_-SINEAluAluSx1
CAediting_469683chr6_33303372_-SINEAluAluSx1
CAediting_469684chr6_33303380_-SINEAluAluSx1
CAediting_469685chr6_33303393_-SINEAluAluSx1
CAediting_469686chr6_33303407_-SINEAluAluSx1
CAediting_469687chr6_33303409_-SINEAluAluSx1
CAediting_469688chr6_33303413_-SINEAluAluSx1
CAediting_469689chr6_33306712_-SINEAluAluSp
CAediting_469690chr6_33306713_-SINEAluAluSp
CAediting_469691chr6_33306716_-SINEAluAluSp
CAediting_469692chr6_33306734_-SINEAluAluSp
CAediting_469693chr6_33306735_-SINEAluAluSp
CAediting_469694chr6_33306775_-SINEAluAluSp
CAediting_469695chr6_33306776_-SINEAluAluSp
CAediting_469696chr6_33306813_-SINEAluAluSp
CAediting_469697chr6_33306816_-SINEAluAluSp
CAediting_469698chr6_33306856_-SINEAluAluSp
CAediting_469699chr6_33306892_-SINEAluAluSp
CAediting_469700chr6_33306895_-SINEAluAluSp
CAediting_469701chr6_33307031_-SINEAluAluSx1
CAediting_469702chr6_33307053_-SINEAluAluSx1
CAediting_469703chr6_33307083_-SINEAluAluSx1
CAediting_469704chr6_33307084_-SINEAluAluSx1
CAediting_469705chr6_33307096_-SINEAluAluSx1
CAediting_469706chr6_33307116_-SINEAluAluSx1
CAediting_469707chr6_33307125_-SINEAluAluSx1
CAediting_469708chr6_33307172_-SINEAluAluSx1
CAediting_469709chr6_33307176_-SINEAluAluSx1
CAediting_469710chr6_33307179_-SINEAluAluSx1
CAediting_469711chr6_33307180_-SINEAluAluSx1
CAediting_469712chr6_33307188_-SINEAluAluSx1
CAediting_469713chr6_33307201_-SINEAluAluSx1
CAediting_469714chr6_33307205_-SINEAluAluSx1
CAediting_469715chr6_33307206_-SINEAluAluSx1
CAediting_469716chr6_33307212_-SINEAluAluSx1
CAediting_469717chr6_33307244_-SINEAluAluSx1
CAediting_469718chr6_33307274_-SINEAluAluSx1
CAediting_469719chr6_33307433_-SINEAluAluSx1
CAediting_469720chr6_33307444_-SINEAluAluSx1
CAediting_469721chr6_33307456_-SINEAluAluSx1
CAediting_469722chr6_33307462_-SINEAluAluSx1
CAediting_469723chr6_33307469_-SINEAluAluSx1
CAediting_469724chr6_33307470_-SINEAluAluSx1
CAediting_469725chr6_33307478_-SINEAluAluSx1
CAediting_469726chr6_33307487_-SINEAluAluSx1
CAediting_469727chr6_33307498_-SINEAluAluSx1
CAediting_469728chr6_33307499_-SINEAluAluSx1
CAediting_469729chr6_33307504_-SINEAluAluSx1
CAediting_469730chr6_33307510_-SINEAluAluSx1
CAediting_469731chr6_33307513_-SINEAluAluSx1
CAediting_469732chr6_33307526_-SINEAluAluSx1
CAediting_469733chr6_33307530_-SINEAluAluSx1
CAediting_469734chr6_33307534_-SINEAluAluSx1
CAediting_469735chr6_33307539_-SINEAluAluSx1
CAediting_469736chr6_33307558_-SINEAluAluSx1
CAediting_469737chr6_33307566_-SINEAluAluSx1
CAediting_469738chr6_33307569_-SINEAluAluSx1
CAediting_469739chr6_33307580_-SINEAluAluSx1
CAediting_469740chr6_33307584_-SINEAluAluSx1
CAediting_469741chr6_33307590_-SINEAluAluSx1
CAediting_469742chr6_33307595_-SINEAluAluSx1
CAediting_469743chr6_33307596_-SINEAluAluSx1
CAediting_469744chr6_33307597_-SINEAluAluSx1
CAediting_469745chr6_33307605_-SINEAluAluSx1
CAediting_469746chr6_33307620_-SINEAluAluSx1
CAediting_469747chr6_33307621_-SINEAluAluSx1
CAediting_469748chr6_33307639_-SINEAluAluSx1
CAediting_469749chr6_33307648_-SINEAluAluSx1
CAediting_469750chr6_33307651_-SINEAluAluSx1
CAediting_469751chr6_33307652_-SINEAluAluSx1
CAediting_469752chr6_33307653_-SINEAluAluSx1
CAediting_469753chr6_33307656_-SINEAluAluSx1
CAediting_469754chr6_33307674_-SINEAluAluSx1
CAediting_469755chr6_33307683_-SINEAluAluSx1
CAediting_469756chr6_33308066_-SINEAluAluSq2
CAediting_469757chr6_33308078_-SINEAluAluSq2
CAediting_469758chr6_33308088_-SINEAluAluSq2
CAediting_469759chr6_33308118_-SINEAluAluSq2
CAediting_469760chr6_33308131_-SINEAluAluSq2
CAediting_469761chr6_33308160_-SINEAluAluSq2
CAediting_469762chr6_33308214_-SINEAluAluSq2
CAediting_469763chr6_33308216_-SINEAluAluSq2
CAediting_469764chr6_33308252_-SINEAluAluSq2
CAediting_469765chr6_33308255_-SINEAluAluSq2
CAediting_469766chr6_33308256_-SINEAluAluSq2
CAediting_469767chr6_33308281_-SINEAluAluSq2
CAediting_469768chr6_33308299_-SINEAluAluSq2
CAediting_469769chr6_33309138_-SINEAluAluSp
CAediting_469770chr6_33309150_-SINEAluAluSp
CAediting_469771chr6_33309178_-SINEAluAluSp
CAediting_469772chr6_33309184_-SINEAluAluSp
CAediting_469773chr6_33309192_-SINEAluAluSp
CAediting_469774chr6_33309220_-SINEAluAluSp
CAediting_469775chr6_33309223_-SINEAluAluSp
CAediting_469776chr6_33309229_-SINEAluAluSp
CAediting_469777chr6_33309236_-SINEAluAluSp
CAediting_469778chr6_33309237_-SINEAluAluSp
CAediting_469779chr6_33309261_-SINEAluAluSp
CAediting_469780chr6_33309263_-SINEAluAluSp
CAediting_469781chr6_33309273_-SINEAluAluSp
CAediting_469782chr6_33309277_-SINEAluAluSp
CAediting_469783chr6_33309285_-SINEAluAluSp
CAediting_469784chr6_33309302_-SINEAluAluSp
CAediting_469785chr6_33309309_-SINEAluAluSp
CAediting_469786chr6_33309322_-SINEAluAluSp
CAediting_469787chr6_33309325_-SINEAluAluSp
CAediting_469788chr6_33309346_-SINEAluAluSp
CAediting_469789chr6_33309444_-SINEAluFLAM_C
CAediting_469790chr6_33309445_-SINEAluFLAM_C
CAediting_469791chr6_33309456_-SINEAluFLAM_C
CAediting_469792chr6_33309461_-SINEAluFLAM_C
CAediting_469793chr6_33309486_-SINEAluFLAM_C
CAediting_469794chr6_33309538_-SINEAluFLAM_C
CAediting_469795chr6_33309684_-SINEAluAluJo
CAediting_469796chr6_33309688_-SINEAluAluJo
CAediting_469797chr6_33309759_-SINEAluAluSp
CAediting_469798chr6_33309760_-SINEAluAluSp
CAediting_469799chr6_33309793_-SINEAluAluSp
CAediting_469800chr6_33309835_-SINEAluAluSp
CAediting_469801chr6_33309836_-SINEAluAluSp
CAediting_469802chr6_33309862_-SINEAluAluSp
CAediting_469803chr6_33309885_-SINEAluAluSp
CAediting_469804chr6_33309889_-SINEAluAluSp
CAediting_469805chr6_33309894_-SINEAluAluSp
CAediting_469806chr6_33309897_-SINEAluAluSp
CAediting_469807chr6_33309917_-SINEAluAluSp
CAediting_469808chr6_33309918_-SINEAluAluSp
CAediting_469809chr6_33309942_-SINEAluAluSp
CAediting_469810chr6_33309943_-SINEAluAluSp
CAediting_469811chr6_33309956_-SINEAluAluSp
CAediting_469812chr6_33309966_-SINEAluAluSp
CAediting_469813chr6_33309996_-SINEAluAluSp
CAediting_469814chr6_33309997_-SINEAluAluSp
CAediting_469815chr6_33310056_-SINEAluAluJo
CAediting_469816chr6_33310057_-SINEAluAluJo
CAediting_469817chr6_33310061_-SINEAluAluJo
CAediting_469818chr6_33310062_-SINEAluAluJo
CAediting_469819chr6_33310077_-SINEAluAluJo
CAediting_469820chr6_33310085_-SINEAluAluJo
CAediting_469821chr6_33310108_-SINEAluAluJo
CAediting_469822chr6_33310122_-SINEAluAluJo
CAediting_469823chr6_33310262_-SINEAluAluSx1
CAediting_469824chr6_33310318_-SINEAluAluSx1
CAediting_469825chr6_33310323_-SINEAluAluSx1
CAediting_469826chr6_33310362_-SINEAluAluSx1
CAediting_469827chr6_33310384_-SINEAluAluSx1
CAediting_469828chr6_33310406_-SINEAluAluSx1
CAediting_469829chr6_33310419_-SINEAluAluSx1
CAediting_469830chr6_33310459_-SINEAluAluSx1
CAediting_469831chr6_33310574_-SINEAluAluJb
CAediting_469832chr6_33310671_-SINEAluAluJb
CAediting_469833chr6_33310697_-SINEAluAluJb
CAediting_469834chr6_33310702_-SINEAluAluJb
CAediting_469835chr6_33310707_-SINEAluAluJb
CAediting_469836chr6_33310719_-SINEAluAluJb
CAediting_469837chr6_33310736_-SINEAluAluJb
CAediting_469838chr6_33310830_-SINEAluAluJb
CAediting_469839chr6_33311194_-SINEAluAluSq
CAediting_469840chr6_33311204_-SINEAluAluSq
CAediting_469841chr6_33311319_-SINEAluAluSq
CAediting_469842chr6_33311456_-SINEAluAluSp
CAediting_469843chr6_33311542_-SINEAluAluSp
CAediting_469844chr6_33311628_-SINEAluAluSp

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RNA A-to-I editing events in the alternative splicing sites for TAPBP

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
IRCAediting_469541chr6_33300405_-33300399:333004213SS0+4iCCAAAGTGCTGGGATTACAGGCG-1.62CCAAAGTGCTGGGATTGCAGGCG-0.61
IRCAediting_469542chr6_33300419_-33300399:333004213SS0+18iCCAAAGTGCTGGGATTACAGGCG-1.62CCGAAGTGCTGGGATTACAGGCG-1.44
IRCAediting_469547chr6_33300539_-33300533:333005553SS0+4iCCGAGTAGCTGGGACTACAGGGG-6.51CCGAGTAGCTGGGACTGCAGGGG-5.41
IRCAediting_469548chr6_33300549_-33300533:333005553SS0+14iCCGAGTAGCTGGGACTACAGGGG-6.51CCGAGTGGCTGGGACTACAGGGG-2.74
IRCAediting_469551chr6_33300776_-33300768:333007903SS0+6iGGTTTCACCGTGTTAGCCAGGAT-1.42GGTTTCACCGTGTTGGCCAGGAT2.85
IRCAediting_469555chr6_33301317_-33301311:333013333SS0+4iCCAAAGTGCTGGGATTACAGGCG-1.62CCAAAGTGCTGGGATTGCAGGCG-0.61
IRCAediting_469556chr6_33301329_-33301311:333013333SS0+16iCCAAAGTGCTGGGATTACAGGCG-1.62CCAAGGTGCTGGGATTACAGGCG-1.12
IRCAediting_469557chr6_33301331_-33301311:333013333SS0+18iCCAAAGTGCTGGGATTACAGGCG-1.62CCGAAGTGCTGGGATTACAGGCG-1.44
ESCAediting_469612chr6_33302622_-33302614:333026225SS3+0iAGGTGCGTT-21.18GGGTGCGTT-23.79
ESCAediting_469632chr6_33302802_-33302802:333028243SS3+0iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAATACAAAAAATTAGCCG-4.24
IRCAediting_469632chr6_33302802_-33302798:333028203SS0+2iAAATACAAAAAATTAGCCAGATG-5.63AAATACAAAAAATTAGCCGGATG-13.58
IRCAediting_469632chr6_33302802_-33302802:333028243SS3+0iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAATACAAAAAATTAGCCG-4.24
ESCAediting_469633chr6_33302806_-33302802:333028243SS0+2iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAATACAAAAAATTGGCCA-12.26
IRCAediting_469633chr6_33302806_-33302798:333028203SS0+6iAAATACAAAAAATTAGCCAGATG-5.63AAATACAAAAAATTGGCCAGATG-1.09
IRCAediting_469633chr6_33302806_-33302802:333028243SS0+2iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAATACAAAAAATTGGCCA-12.26
ESCAediting_469634chr6_33302810_-33302802:333028243SS0+6iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAATACAAAAGATTAGCCA-8.7
IRCAediting_469634chr6_33302810_-33302798:333028203SS0+10iAAATACAAAAAATTAGCCAGATG-5.63AAATACAAAAGATTAGCCAGATG-11.04
IRCAediting_469634chr6_33302810_-33302802:333028243SS0+6iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAATACAAAAGATTAGCCA-8.7
ESCAediting_469635chr6_33302811_-33302802:333028243SS0+7iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAATACAAAGAATTAGCCA-10.52
IRCAediting_469635chr6_33302811_-33302798:333028203SS0+11iAAATACAAAAAATTAGCCAGATG-5.63AAATACAAAGAATTAGCCAGATG-11.16
IRCAediting_469635chr6_33302811_-33302802:333028243SS0+7iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAATACAAAGAATTAGCCA-10.52
ESCAediting_469636chr6_33302812_-33302802:333028243SS0+8iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAATACAAGAAATTAGCCA-11.27
IRCAediting_469636chr6_33302812_-33302798:333028203SS0+12iAAATACAAAAAATTAGCCAGATG-5.63AAATACAAGAAATTAGCCAGATG-10.98
IRCAediting_469636chr6_33302812_-33302802:333028243SS0+8iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAATACAAGAAATTAGCCA-11.27
ESCAediting_469637chr6_33302813_-33302802:333028243SS0+9iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAATACAGAAAATTAGCCA-9.84
IRCAediting_469637chr6_33302813_-33302798:333028203SS0+13iAAATACAAAAAATTAGCCAGATG-5.63AAATACAGAAAATTAGCCAGATG-8.84
IRCAediting_469637chr6_33302813_-33302802:333028243SS0+9iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAATACAGAAAATTAGCCA-9.84
ESCAediting_469638chr6_33302816_-33302802:333028243SS0+12iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAATGCAAAAAATTAGCCA-4.61
IRCAediting_469638chr6_33302816_-33302798:333028203SS0+16iAAATACAAAAAATTAGCCAGATG-5.63AAATGCAAAAAATTAGCCAGATG-5.59
IRCAediting_469638chr6_33302816_-33302802:333028243SS0+12iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAATGCAAAAAATTAGCCA-4.61
ESCAediting_469639chr6_33302818_-33302802:333028243SS0+14iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAGTACAAAAAATTAGCCA-6.41
IRCAediting_469639chr6_33302818_-33302798:333028203SS0+18iAAATACAAAAAATTAGCCAGATG-5.63AAGTACAAAAAATTAGCCAGATG-6.58
IRCAediting_469639chr6_33302818_-33302802:333028243SS0+14iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAAGTACAAAAAATTAGCCA-6.41
ESCAediting_469640chr6_33302819_-33302802:333028243SS0+15iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAGATACAAAAAATTAGCCA-6.59
IRCAediting_469640chr6_33302819_-33302798:333028203SS0+19iAAATACAAAAAATTAGCCAGATG-5.63AGATACAAAAAATTAGCCAGATG-6.15
IRCAediting_469640chr6_33302819_-33302802:333028243SS0+15iCTAAAAATACAAAAAATTAGCCA-4.31CTAAAGATACAAAAAATTAGCCA-6.59
ESCAediting_469641chr6_33302820_-33302802:333028243SS0+16iCTAAAAATACAAAAAATTAGCCA-4.31CTAAGAATACAAAAAATTAGCCA-5.68
IRCAediting_469641chr6_33302820_-33302798:333028203SS0+20iAAATACAAAAAATTAGCCAGATG-5.63GAATACAAAAAATTAGCCAGATG-5.62
IRCAediting_469641chr6_33302820_-33302802:333028243SS0+16iCTAAAAATACAAAAAATTAGCCA-4.31CTAAGAATACAAAAAATTAGCCA-5.68
ESCAediting_469642chr6_33302821_-33302802:333028243SS0+17iCTAAAAATACAAAAAATTAGCCA-4.31CTAGAAATACAAAAAATTAGCCA-6.61
IRCAediting_469642chr6_33302821_-33302802:333028243SS0+17iCTAAAAATACAAAAAATTAGCCA-4.31CTAGAAATACAAAAAATTAGCCA-6.61
ESCAediting_469643chr6_33302822_-33302802:333028243SS0+18iCTAAAAATACAAAAAATTAGCCA-4.31CTGAAAATACAAAAAATTAGCCA-4.27
IRCAediting_469643chr6_33302822_-33302802:333028243SS0+18iCTAAAAATACAAAAAATTAGCCA-4.31CTGAAAATACAAAAAATTAGCCA-4.27
IRCAediting_469686chr6_33303407_-33303405:333034273SS1+0iTCTCTTTTTTTTTGAGACAGAGT2.75TCTCTTTTTTTTTGAGACAGGGT3.93
IRCAediting_469687chr6_33303409_-33303405:333034273SS0+2iTCTCTTTTTTTTTGAGACAGAGT2.75TCTCTTTTTTTTTGAGACGGAGT-5.2
IRCAediting_469688chr6_33303413_-33303405:333034273SS0+6iTCTCTTTTTTTTTGAGACAGAGT2.75TCTCTTTTTTTTTGGGACAGAGT6.87
ESCAediting_469761chr6_33308160_-33308153:333081753SS0+5iTTTTTTTGTATTTTTAGTAGAGA4.02TTTTTTTGTATTTTTGGTAGAGA5.44
ESCAediting_469761chr6_33308160_-33308156:333081783SS0+2iTTTTTTTTTTGTATTTTTAGTAG7.28TTTTTTTTTTGTATTTTTGGTAG-0.67

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000231925.10.TAPBP.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000231925.10.TAPBP.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TAPBP

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
BRCA.CAediting_469618.ENSG00000231925.TAPBP.png
Soverview
ESCA.CAediting_469611.ENSG00000231925.TAPBP.png
Soverview
ESCA.CAediting_469645.ENSG00000231925.TAPBP.png
Soverview
GBM.CAediting_469618.ENSG00000231925.TAPBP.png
Soverview
KIRC.CAediting_469656.ENSG00000231925.TAPBP.png
Soverview
LUSC.CAediting_469611.ENSG00000231925.TAPBP.png
Soverview
OV.CAediting_469618.ENSG00000231925.TAPBP.png
Soverview
STAD.CAediting_469611.ENSG00000231925.TAPBP.png
Soverview
STAD.CAediting_469651.ENSG00000231925.TAPBP.png
Soverview
STAD.CAediting_469664.ENSG00000231925.TAPBP.png
Soverview
STAD.CAediting_469680.ENSG00000231925.TAPBP.png
Soverview
STAD.CAediting_469681.ENSG00000231925.TAPBP.png
Soverview
STAD.CAediting_469683.ENSG00000231925.TAPBP.png
Soverview
STAD.CAediting_469684.ENSG00000231925.TAPBP.png
Soverview

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Protein coding region RNA A-to-I editings for TAPBP

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for TAPBP

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_469544chr6_33300472_-ENSG00000231925.10ENST00000434618hsa-miR-3190-5p33300467333004737mer-m83330046633300484152.00-22.63
CAediting_469544chr6_33300472_-ENSG00000231925.10ENST00000434618hsa-miR-548s33300468333004747mer-m83330046733300489149.00-13.99
CAediting_469551chr6_33300776_-ENSG00000231925.10ENST00000434618hsa-miR-3190-5p33300771333007777mer-m83330077033300788152.00-22.63
CAediting_469551chr6_33300776_-ENSG00000231925.10ENST00000434618hsa-miR-548s33300772333007787mer-m83330077133300793149.00-13.99
CAediting_469552chr6_33300844_-ENSG00000231925.10ENST00000434618hsa-miR-17-3p33300841333008477mer-m83330084033300862158.00-19.36
CAediting_469567chr6_33301511_-ENSG00000231925.10ENST00000434618hsa-miR-17-3p33301511333015177mer-m83330151033301530153.00-15.19
CAediting_469567chr6_33301511_-ENSG00000231925.10ENST00000434618hsa-miR-485-5p33301507333015137mer-m83330150633301526149.00-16.78
CAediting_469567chr6_33301511_-ENSG00000231925.10ENST00000434618hsa-miR-60433301509333015146mer3330150833301527144.00-23.97
CAediting_469567chr6_33301511_-ENSG00000231925.10ENST00000434618hsa-miR-6884-5p33301507333015137mer-m83330150633301528154.00-17.69
CAediting_469541chr6_33300405_-ENSG00000231925.10ENST00000434618hsa-miR-106a-3p33300403333004086mer3330040233300423141.00-21.13
CAediting_469542chr6_33300419_-ENSG00000231925.10ENST00000434618hsa-miR-6771-5p33300417333004248mer-1a3330041733300440158.00-29.82
CAediting_469547chr6_33300539_-ENSG00000231925.10ENST00000434618hsa-miR-17-3p33300536333005427mer-m83330053533300557154.00-20.36
CAediting_469548chr6_33300549_-ENSG00000231925.10ENST00000434618hsa-miR-4691-3p33300545333005517mer-m83330054433300571150.00-26.36
CAediting_469553chr6_33300854_-ENSG00000231925.10ENST00000434618hsa-miR-3614-5p33300854333008607mer-m83330085333300876152.00-25.27
CAediting_469554chr6_33300858_-ENSG00000231925.10ENST00000434618hsa-miR-6771-5p33300857333008637mer-m83330085633300875160.00-34.33
CAediting_469555chr6_33301317_-ENSG00000231925.10ENST00000434618hsa-miR-106a-3p33301315333013206mer3330131433301335141.00-21.13
CAediting_469557chr6_33301331_-ENSG00000231925.10ENST00000434618hsa-miR-6771-5p33301329333013368mer-1a3330132933301352150.00-27.56
CAediting_469563chr6_33301462_-ENSG00000231925.10ENST00000434618hsa-miR-4691-3p33301458333014647mer-m83330145733301484147.00-28.35
CAediting_469570chr6_33301527_-ENSG00000231925.10ENST00000434618hsa-miR-548ao-3p33301523333015286mer3330152233301542146.00-20.80
CAediting_469570chr6_33301527_-ENSG00000231925.10ENST00000434618hsa-miR-59133301525333015317mer-m83330152433301543143.00-20.50
CAediting_469570chr6_33301527_-ENSG00000231925.10ENST00000434618hsa-miR-6502-3p33301524333015307mer-m83330152333301543147.00-13.39
CAediting_469570chr6_33301527_-ENSG00000231925.10ENST00000434618hsa-miR-6872-3p33301527333015337mer-m83330152633301547151.00-27.76
CAediting_469556chr6_33301329_-ENSG00000231925.10ENST00000434618hsa-miR-3189-3p33301328333013347mer-m83330132733301346153.00-22.76
CAediting_469556chr6_33301329_-ENSG00000231925.10ENST00000434618hsa-miR-6813-3p33301327333013337mer-m83330132633301346140.00-10.68
CAediting_469559chr6_33301391_-ENSG00000231925.10ENST00000434618hsa-miR-433-5p33301390333013967mer-m83330138933301412163.00-28.05
CAediting_469572chr6_33301536_-ENSG00000231925.10ENST00000434618hsa-miR-106b-3p33301536333015427mer-m83330153533301556147.00-22.37

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_469554chr6_33300858_-ENSG00000231925.10ENST00000434618hsa-miR-1212633300854333008618mer-1a3330085433300877147-13.23
CAediting_469557chr6_33301331_-ENSG00000231925.10ENST00000434618hsa-miR-1273h-5p33301330333013378mer-1a3330133033301349151-20.3
CAediting_469547chr6_33300539_-ENSG00000231925.10ENST00000434618hsa-miR-146b-3p33300534333005396mer3330053333300555154-27.43
CAediting_469547chr6_33300539_-ENSG00000231925.10ENST00000434618hsa-miR-20b-3p33300536333005427mer-m83330053533300557153-18.18
CAediting_469564chr6_33301487_-ENSG00000231925.10ENST00000434618hsa-miR-219b-3p33301484333014907mer-m83330148333301503153-18.56
CAediting_469565chr6_33301488_-ENSG00000231925.10ENST00000434618hsa-miR-219b-3p33301484333014907mer-m83330148333301503153-18.56
CAediting_469564chr6_33301487_-ENSG00000231925.10ENST00000434618hsa-miR-302f33301485333014917mer-m83330148433301500145-8.67
CAediting_469565chr6_33301488_-ENSG00000231925.10ENST00000434618hsa-miR-302f33301485333014917mer-m83330148433301500145-8.67
CAediting_469543chr6_33300468_-ENSG00000231925.10ENST00000434618hsa-miR-3064-5p33300467333004726mer3330046633300486144-24.26
CAediting_469544chr6_33300472_-ENSG00000231925.10ENST00000434618hsa-miR-3064-5p33300467333004726mer3330046633300486144-24.26
CAediting_469551chr6_33300776_-ENSG00000231925.10ENST00000434618hsa-miR-3064-5p33300771333007766mer3330077033300790144-24.26
CAediting_469542chr6_33300419_-ENSG00000231925.10ENST00000434618hsa-miR-30b-3p33300418333004258mer-1a3330041833300439151-17.42
CAediting_469557chr6_33301331_-ENSG00000231925.10ENST00000434618hsa-miR-30b-3p33301330333013378mer-1a3330133033301351155-16.01
CAediting_469554chr6_33300858_-ENSG00000231925.10ENST00000434618hsa-miR-30b-3p33300857333008648mer-1a3330085733300878151-15.38
CAediting_469572chr6_33301536_-ENSG00000231925.10ENST00000434618hsa-miR-3130-3p33301535333015406mer3330153433301554143-25.17
CAediting_469572chr6_33301536_-ENSG00000231925.10ENST00000434618hsa-miR-3130-3p33301535333015406mer3330153433301554143-25.17
CAediting_469572chr6_33301536_-ENSG00000231925.10ENST00000434618hsa-miR-324-3p33301532333015387mer-m83330153133301555144-20.9
CAediting_469574chr6_33301570_-ENSG00000231925.10ENST00000434618hsa-miR-340-3p33301566333015738mer-1a3330156633301587146-18.22
CAediting_469575chr6_33301572_-ENSG00000231925.10ENST00000434618hsa-miR-340-3p33301566333015738mer-1a3330156633301587146-18.22
CAediting_469573chr6_33301560_-ENSG00000231925.10ENST00000434618hsa-miR-367233301560333015667mer-m83330155933301582154-14.58
CAediting_469542chr6_33300419_-ENSG00000231925.10ENST00000434618hsa-miR-3689a-3p33300418333004258mer-1a3330041833300438143-21.59
CAediting_469557chr6_33301331_-ENSG00000231925.10ENST00000434618hsa-miR-3689a-3p33301330333013378mer-1a3330133033301350148-21.21
CAediting_469554chr6_33300858_-ENSG00000231925.10ENST00000434618hsa-miR-3689a-3p33300857333008648mer-1a3330085733300877147-18.72
CAediting_469542chr6_33300419_-ENSG00000231925.10ENST00000434618hsa-miR-3689b-3p33300418333004258mer-1a3330041833300438143-20.35
CAediting_469557chr6_33301331_-ENSG00000231925.10ENST00000434618hsa-miR-3689b-3p33301330333013378mer-1a3330133033301350148-21.26
CAediting_469554chr6_33300858_-ENSG00000231925.10ENST00000434618hsa-miR-3689b-3p33300857333008648mer-1a3330085733300877147-17.55
CAediting_469542chr6_33300419_-ENSG00000231925.10ENST00000434618hsa-miR-3689c33300418333004258mer-1a3330041833300438143-20.35
CAediting_469557chr6_33301331_-ENSG00000231925.10ENST00000434618hsa-miR-3689c33301330333013378mer-1a3330133033301350148-21.26
CAediting_469554chr6_33300858_-ENSG00000231925.10ENST00000434618hsa-miR-3689c33300857333008648mer-1a3330085733300877147-17.55
CAediting_469575chr6_33301572_-ENSG00000231925.10ENST00000434618hsa-miR-371b-5p33301570333015778mer-1a3330157033301591146-7.79
CAediting_469575chr6_33301572_-ENSG00000231925.10ENST00000434618hsa-miR-373-5p33301570333015778mer-1a3330157033301591142-8.35
CAediting_469567chr6_33301511_-ENSG00000231925.10ENST00000434618hsa-miR-377-5p33301507333015137mer-m83330150633301527155-15.23
CAediting_469568chr6_33301512_-ENSG00000231925.10ENST00000434618hsa-miR-377-5p33301507333015137mer-m83330150633301527155-15.23
CAediting_469572chr6_33301536_-ENSG00000231925.10ENST00000434618hsa-miR-425233301530333015378mer-1a3330153033301550149-20.04
CAediting_469558chr6_33301339_-ENSG00000231925.10ENST00000434618hsa-miR-447833301335333013417mer-m83330133433301350154-23.4
CAediting_469549chr6_33300561_-ENSG00000231925.10ENST00000434618hsa-miR-4649-3p33300560333005667mer-m83330055933300579140-14.11
CAediting_469545chr6_33300494_-ENSG00000231925.10ENST00000434618hsa-miR-4684-5p33300490333004967mer-m83330048933300511155-15.04
CAediting_469571chr6_33301530_-ENSG00000231925.10ENST00000434618hsa-miR-4715-3p33301530333015356mer3330152933301550142-29.85
CAediting_469543chr6_33300468_-ENSG00000231925.10ENST00000434618hsa-miR-4793-5p33300463333004697mer-m83330046233300485154-20.69
CAediting_469543chr6_33300468_-ENSG00000231925.10ENST00000434618hsa-miR-479433300467333004737mer-m83330046633300488151-21.79
CAediting_469544chr6_33300472_-ENSG00000231925.10ENST00000434618hsa-miR-479433300467333004737mer-m83330046633300488151-21.79
CAediting_469551chr6_33300776_-ENSG00000231925.10ENST00000434618hsa-miR-479433300771333007777mer-m83330077033300792151-21.79
CAediting_469558chr6_33301339_-ENSG00000231925.10ENST00000434618hsa-miR-485-5p33301334333013407mer-m83330133333301353144-16.49
CAediting_469574chr6_33301570_-ENSG00000231925.10ENST00000434618hsa-miR-514b-5p33301570333015756mer3330156933301590146-12.74
CAediting_469575chr6_33301572_-ENSG00000231925.10ENST00000434618hsa-miR-514b-5p33301570333015756mer3330156933301590146-12.74
CAediting_469573chr6_33301560_-ENSG00000231925.10ENST00000434618hsa-miR-5586-3p33301556333015627mer-m83330155533301576152-14.48
CAediting_469548chr6_33300549_-ENSG00000231925.10ENST00000434618hsa-miR-569033300545333005517mer-m83330054433300564145-16.75
CAediting_469563chr6_33301462_-ENSG00000231925.10ENST00000434618hsa-miR-569033301458333014647mer-m83330145733301477147-18.86
CAediting_469560chr6_33301408_-ENSG00000231925.10ENST00000434618hsa-miR-593-3p33301403333014086mer3330140233301420140-18.96
CAediting_469567chr6_33301511_-ENSG00000231925.10ENST00000434618hsa-miR-608633301507333015137mer-m83330150633301526153-21.13
CAediting_469568chr6_33301512_-ENSG00000231925.10ENST00000434618hsa-miR-608633301507333015137mer-m83330150633301526153-21.13
CAediting_469575chr6_33301572_-ENSG00000231925.10ENST00000434618hsa-miR-616-5p33301570333015778mer-1a3330157033301591140-5.71
CAediting_469567chr6_33301511_-ENSG00000231925.10ENST00000434618hsa-miR-6516-5p33301511333015177mer-m83330151033301533153-15.69
CAediting_469568chr6_33301512_-ENSG00000231925.10ENST00000434618hsa-miR-6516-5p33301511333015177mer-m83330151033301533153-15.69
CAediting_469543chr6_33300468_-ENSG00000231925.10ENST00000434618hsa-miR-664a-5p33300467333004737mer-m83330046633300489141-16.08
CAediting_469544chr6_33300472_-ENSG00000231925.10ENST00000434618hsa-miR-664a-5p33300467333004737mer-m83330046633300489141-16.08
CAediting_469551chr6_33300776_-ENSG00000231925.10ENST00000434618hsa-miR-664a-5p33300771333007777mer-m83330077033300793141-16.08
CAediting_469549chr6_33300561_-ENSG00000231925.10ENST00000434618hsa-miR-6765-5p33300561333005666mer3330056033300581151-30.57
CAediting_469542chr6_33300419_-ENSG00000231925.10ENST00000434618hsa-miR-6779-5p33300418333004258mer-1a3330041833300436144-23.32
CAediting_469557chr6_33301331_-ENSG00000231925.10ENST00000434618hsa-miR-6779-5p33301330333013378mer-1a3330133033301348152-23.33
CAediting_469554chr6_33300858_-ENSG00000231925.10ENST00000434618hsa-miR-6779-5p33300857333008648mer-1a3330085733300875148-22.58
CAediting_469542chr6_33300419_-ENSG00000231925.10ENST00000434618hsa-miR-6780a-5p33300418333004258mer-1a3330041833300441148-22.35
CAediting_469557chr6_33301331_-ENSG00000231925.10ENST00000434618hsa-miR-6780a-5p33301330333013378mer-1a3330133033301354143-19.32
CAediting_469554chr6_33300858_-ENSG00000231925.10ENST00000434618hsa-miR-6780a-5p33300857333008648mer-1a3330085733300880152-25.37
CAediting_469574chr6_33301570_-ENSG00000231925.10ENST00000434618hsa-miR-6827-3p33301566333015738mer-1a3330156633301586140-14.67
CAediting_469575chr6_33301572_-ENSG00000231925.10ENST00000434618hsa-miR-6827-3p33301566333015738mer-1a3330156633301586140-14.67
CAediting_469549chr6_33300561_-ENSG00000231925.10ENST00000434618hsa-miR-7160-5p33300559333005657mer-m83330055833300577149-19.19
CAediting_469558chr6_33301339_-ENSG00000231925.10ENST00000434618hsa-miR-7162-3p33301338333013447mer-m83330133733301354153-22.62
CAediting_469559chr6_33301391_-ENSG00000231925.10ENST00000434618hsa-miR-7855-5p33301391333013966mer3330139033301410140-24.29
CAediting_469542chr6_33300419_-ENSG00000231925.10ENST00000434618hsa-miR-887-5p33300417333004248mer-1a3330041733300437147-13.82
CAediting_469557chr6_33301331_-ENSG00000231925.10ENST00000434618hsa-miR-887-5p33301329333013368mer-1a3330132933301348143-13.53
CAediting_469554chr6_33300858_-ENSG00000231925.10ENST00000434618hsa-miR-887-5p33300857333008637mer-m83330085633300875143-19.73

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000231925.10ENST00000434618hsa-miR-605-3p33300048333000547mer-m83330004733300068140-16.59
CAediting_688081chr9_63819627_+ENSG00000231925.10ENST00000434618hsa-miR-4477b33301691333016988mer-1a3330169133301712140-10.07
CAediting_688081chr9_63819627_+ENSG00000231925.10ENST00000475304hsa-miR-4477b33301691333016988mer-1a3330169133301712140-10.07
CAediting_1229414chr17_67471546_+ENSG00000231925.10ENST00000434618hsa-miR-548aa33301372333013787mer-m83330137133301395140-12.74
CAediting_580943chr7_100356700_+ENSG00000231925.10ENST00000434618hsa-miR-6840-3p33300583333005897mer-m83330058233300603151-31.77
CAediting_468389chr6_31355314_-ENSG00000231925.10ENST00000434618hsa-miR-6891-5p33300159333001657mer-m83330015833300177143-22.96

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_580943chr7_100356700_+ENSG00000231925.10ENST00000434618hsa-miR-6840-3p33301496333015027mer-m83330149533301511141-25.22

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TAPBP

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000434618.5protein_codingSoverviewSoverview
ENST00000475304.4protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_469541ENST00000434618.5chr6_33300405_--1460.00-1458.50-1514.70
CAediting_469542ENST00000434618.5chr6_33300419_--1464.00-1458.50-1514.70
CAediting_469543ENST00000434618.5chr6_33300468_--1464.60-1458.50-1514.70
CAediting_469544ENST00000434618.5chr6_33300472_--1460.80-1458.50-1514.70
CAediting_469545ENST00000434618.5chr6_33300494_--1462.10-1458.50-1514.70
CAediting_469546ENST00000434618.5chr6_33300497_--1462.10-1458.50-1514.70
CAediting_469547ENST00000434618.5chr6_33300539_--1459.50-1458.50-1514.70
CAediting_469548ENST00000434618.5chr6_33300549_--1457.80-1458.50-1514.70
CAediting_469549ENST00000434618.5chr6_33300561_--1464.70-1458.50-1514.70
CAediting_469550ENST00000434618.5chr6_33300709_--1462.20-1458.50-1514.70
CAediting_469551ENST00000434618.5chr6_33300776_--1461.60-1458.50-1514.70
CAediting_469552ENST00000434618.5chr6_33300844_--1460.60-1458.50-1514.70
CAediting_469553ENST00000434618.5chr6_33300854_--1461.20-1458.50-1514.70
CAediting_469554ENST00000434618.5chr6_33300858_--1460.90-1458.50-1514.70
CAediting_469555ENST00000434618.5chr6_33301317_--1459.90-1458.50-1514.70
CAediting_469556ENST00000434618.5chr6_33301329_--1461.10-1458.50-1514.70
CAediting_469557ENST00000434618.5chr6_33301331_--1460.70-1458.50-1514.70
CAediting_469558ENST00000434618.5chr6_33301339_--1462.50-1458.50-1514.70
CAediting_469559ENST00000434618.5chr6_33301391_--1458.40-1458.50-1514.70
CAediting_469560ENST00000434618.5chr6_33301408_--1459.60-1458.50-1514.70
CAediting_469561ENST00000434618.5chr6_33301411_--1460.60-1458.50-1514.70
CAediting_469562ENST00000434618.5chr6_33301452_--1458.50-1458.50-1514.70
CAediting_469563ENST00000434618.5chr6_33301462_--1458.50-1458.50-1514.70
CAediting_469564ENST00000434618.5chr6_33301487_--1456.40-1458.50-1514.70
CAediting_469565ENST00000434618.5chr6_33301488_--1458.50-1458.50-1514.70
CAediting_469566ENST00000434618.5chr6_33301492_--1458.60-1458.50-1514.70
CAediting_469567ENST00000434618.5chr6_33301511_--1460.50-1458.50-1514.70
CAediting_469568ENST00000434618.5chr6_33301512_--1458.00-1458.50-1514.70
CAediting_469569ENST00000434618.5chr6_33301517_--1458.00-1458.50-1514.70
CAediting_469570ENST00000434618.5chr6_33301527_--1458.50-1458.50-1514.70
CAediting_469571ENST00000434618.5chr6_33301530_--1459.50-1458.50-1514.70
CAediting_469572ENST00000434618.5chr6_33301536_--1457.80-1458.50-1514.70
CAediting_469573ENST00000434618.5chr6_33301560_--1460.30-1458.50-1514.70
CAediting_469574ENST00000434618.5chr6_33301570_--1458.90-1458.50-1514.70
CAediting_469575ENST00000434618.5chr6_33301572_--1459.50-1458.50-1514.70
CAediting_469759ENST00000475304.4chr6_33308118_--731.90-728.00-731.20
CAediting_469760ENST00000475304.4chr6_33308131_--727.90-728.00-731.20

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Relation with ADAR for TAPBP

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
UCECCAediting_469551chr6_33300776_-..0.01786126624055720.257898938750478..
STADCAediting_469567chr6_33301511_-..0.0002996952609163950.41957310838045..
SARCCAediting_469567chr6_33301511_-0.03116751015800530.257833610429994....
STADCAediting_469580chr6_33302213_-0.03366686489460840.143606321729067....
KIRPCAediting_469580chr6_33302213_-..0.04187450657450040.214973471920398..
ESCACAediting_469580chr6_33302213_-..0.03984636617582330.204889048636339..
OVCAediting_469606chr6_33302546_-....0.0240388525466780.182989254794773
BRCACAediting_469611chr6_33302608_-0.04693300538590230.109628456501691..0.006851541299663130.148810450091966
LUADCAediting_469611chr6_33302608_-0.03348316066292230.191114007448679....
PRADCAediting_469611chr6_33302608_-0.006413844206492990.208300789403027....
THCACAediting_469611chr6_33302608_-....0.01398429045238180.199643390649596
KIRPCAediting_469611chr6_33302608_-0.04722684384050410.24901819925065....
STADCAediting_469618chr6_33302708_-0.009875272774680170.259484921222522....
BRCACAediting_469645chr6_33302831_-..0.04629387881906820.141439111582233..
BRCACAediting_469654chr6_33302915_-0.002688533471901670.201870411672598....
OVCAediting_469654chr6_33302915_-..0.01048119474766090.330859759447692..
BRCACAediting_469655chr6_33302916_-1.26240022830573e-050.25373805024315....
BRCACAediting_469656chr6_33302924_-....0.02995271127306040.222852082578346
KIRCCAediting_469656chr6_33302924_-0.002938719709354370.345674612583717....
STADCAediting_469660chr6_33303159_-0.04758857002917140.19962687618365....
OVCAediting_469724chr6_33307470_-....0.01098205760588830.30663316069472
STADCAediting_469726chr6_33307487_-0.03315650141673560.295944870189133....
ESCACAediting_469729chr6_33307504_-0.04245381338851940.285261441135914....
STADCAediting_469760chr6_33308131_-..0.02172539418331930.250172056265134..

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Relation with cancer stages for TAPBP

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_469585chr6_33302286_-0.04807137425375530.25418008104995
BRCApathologic_stageCAediting_469626chr6_33302757_-0.0438861299200370.202997073363253
ESCAclinical_stageCAediting_469718chr6_33307274_-0.00571159354473416-0.608375952449913
ESCAclinical_stageCAediting_469733chr6_33307530_-0.0228485621012836-0.462562074000797
ESCApathologic_stageCAediting_469711chr6_33307180_-0.0002542224476818880.519623165550939
ESCApathologic_stageCAediting_469718chr6_33307274_-0.0276862009853080.273171232846055
ESCApathologic_stageCAediting_469732chr6_33307526_-0.005705016402210880.32945265377349
ESCApathologic_stageCAediting_469735chr6_33307539_-0.005072774525554380.348885092808053
KIRCpathologic_stageCAediting_469567chr6_33301511_-0.0207074169108530.272216247074007
KIRPclinical_stageCAediting_469580chr6_33302213_-0.03852598692623060.255342490390717
KIRPclinical_stageCAediting_469611chr6_33302608_-0.0476530664828370.293610438321337
KIRPpathologic_stageCAediting_469611chr6_33302608_-0.01384647993708840.316195372288107
LUSCpathologic_stageCAediting_469611chr6_33302608_-0.03563098287218140.255291922568433
OVclinical_stageCAediting_469587chr6_33302385_-0.02545708715951020.24375501989519
OVclinical_stageCAediting_469611chr6_33302608_-0.02529533773054520.154722009490357
STADpathologic_stageCAediting_469603chr6_33302530_-0.005616112771436050.279193895615609
STADpathologic_stageCAediting_469611chr6_33302608_-0.01225790615772080.203379171155256

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Relation with survival for TAPBP

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
BRCACAediting_469659chr6_33303157_-0.03599049745577850.04650862.34829e-07
COADCAediting_469645chr6_33302831_-0.02075307919838050.008029491.25968e-06
STADCAediting_469605chr6_33302545_-0.02600684624205920.002007940.00128978
STADCAediting_469684chr6_33303380_-0.000488622956993590.0009063880.000807509
ESCACAediting_469711chr6_33307180_-0.008365329786108930.026843446.3722
OVCAediting_469612chr6_33302622_-0.009895193636697660.027898131.8358

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RelatedDrugs for TAPBP

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TAPBP

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
TAPBPC0036341Schizophrenia1PSYGENET
TAPBPC1858266Bare Lymphocyte Syndrome, Type I1CTD_human;GENOMICS_ENGLAND;ORPHANET