CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: TAF11 (CAeditome ID:6882)

Gene summary for TAF11

check button Gene summary
Gene informationGene symbol

TAF11

Gene ID

6882

Gene nameTATA-box binding protein associated factor 11
SynonymsMGC:15243|PRO2134|TAF2I|TAFII28
Cytomap

6p21.31

Type of geneprotein-coding
Descriptiontranscription initiation factor TFIID subunit 11TAF(II)28TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDaTAFII-28TATA box binding protein (TBP)-associated factor, RNA polymerase II, I, 28kDTFIID subunit p30-betatransc
Modification date20210518
UniProtAcc

Q15544

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
TAF11

GO:0003713

Transcription initiation factor TFIID subunit 11

8670810

TAF11

GO:0043923

Transcription initiation factor TFIID subunit 11

9108034

TAF11

GO:0005654

Transcription initiation factor TFIID subunit 11

0000052

TAF11

GO:0005794

Transcription initiation factor TFIID subunit 11

0000052

TAF11

GO:0005669

Transcription initiation factor TFIID subunit 11

14580349

TAF11

GO:0005669

Transcription initiation factor TFIID subunit 11

29111974

TAF11

GO:0005669

Transcription initiation factor TFIID subunit 11

7729427

TAF11

GO:0005669

Transcription initiation factor TFIID subunit 11

8670810


Top

RNA A-to-I events for TAF11

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000064995.15
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_471260(34884203, -), CAediting_471261(34885150, -), CAediting_471262(34885170, -), CAediting_471263(34885189, -), CAediting_471264(34885196, -), CAediting_471265(34885206, -), CAediting_471266(34885274, -), CAediting_471267(34885717, -), CAediting_471268(34885722, -), CAediting_471269(34885723, -), CAediting_471270(34885729, -), CAediting_471271(34885739, -), CAediting_471272(34885753, -), CAediting_471273(34885756, -), CAediting_471274(34885802, -), CAediting_471275(34885809, -), CAediting_471276(34885823, -), CAediting_471277(34885859, -), CAediting_471278(34885877, -), CAediting_471279(34885878, -), CAediting_471280(34885903, -), CAediting_471281(34885915, -), CAediting_471282(34885928, -), CAediting_471283(34885936, -), CAediting_471284(34885939, -), CAediting_471285(34885962, -), CAediting_471286(34885965, -), CAediting_471287(34885979, -), CAediting_471288(34886000, -), CAediting_471289(34886006, -), CAediting_471290(34886016, -), CAediting_471291(34886019, -), CAediting_471292(34886028, -), CAediting_471293(34886041, -), CAediting_471294(34886045, -), CAediting_471295(34886046, -), CAediting_471296(34886052, -), CAediting_471297(34886065, -), CAediting_471298(34886066, -), CAediting_471299(34886071, -), CAediting_471300(34886081, -), CAediting_471301(34886082, -), CAediting_471302(34886090, -), CAediting_471303(34886120, -), CAediting_471304(34886122, -), CAediting_471305(34886192, -), CAediting_471306(34886193, -), CAediting_471307(34886210, -), CAediting_471308(34886219, -), CAediting_471309(34886245, -), CAediting_471310(34886275, -), CAediting_471311(34886282, -), CAediting_471312(34886283, -), CAediting_471313(34886373, -), CAediting_471314(34886463, -), CAediting_471315(34886465, -), CAediting_471316(34886473, -), CAediting_471317(34886499, -), CAediting_471318(34886526, -), CAediting_471319(34886531, -), CAediting_471320(34886533, -), CAediting_471321(34886538, -), CAediting_471322(34886542, -), CAediting_471323(34886549, -), CAediting_471324(34886555, -), CAediting_471325(34886562, -), CAediting_471326(34886563, -), CAediting_471327(34886571, -), CAediting_471328(34886574, -), CAediting_471329(34886575, -), CAediting_471330(34886577, -), CAediting_471331(34886587, -), CAediting_471332(34886590, -), CAediting_471333(34886594, -), CAediting_471334(34886604, -), CAediting_471335(34886630, -), CAediting_471336(34886633, -), CAediting_471337(34886634, -), CAediting_471338(34886635, -), CAediting_471339(34886636, -), CAediting_471340(34886639, -), CAediting_471341(34886641, -), CAediting_471342(34886645, -), CAediting_471343(34886648, -), CAediting_471344(34886659, -), CAediting_471345(34886670, -), CAediting_471346(34886690, -), CAediting_471347(34886693, -), CAediting_471348(34886733, -), CAediting_471349(34886738, -), CAediting_471350(34886739, -), CAediting_471351(34886747, -), CAediting_471352(34887047, -), CAediting_471353(34887059, -), CAediting_471354(34887060, -), CAediting_471355(34887061, -), CAediting_471356(34887110, -), CAediting_471357(34887119, -), CAediting_471358(34887134, -), CAediting_471359(34887136, -), CAediting_471360(34887139, -), CAediting_471361(34887145, -), CAediting_471362(34887153, -), CAediting_471363(34887154, -), CAediting_471364(34887172, -), CAediting_471365(34887178, -), CAediting_471366(34887180, -), CAediting_471367(34887186, -), CAediting_471368(34887190, -), CAediting_471369(34887202, -), CAediting_471370(34887239, -), CAediting_471371(34887240, -), CAediting_471372(34887245, -), CAediting_471373(34887256, -), CAediting_471374(34887264, -), CAediting_471375(34887267, -), CAediting_471376(34887268, -), CAediting_471377(34887270, -),

Top

RNA editing positional annotations for TAF11 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_471260chr6_34884203_-intronic
CAediting_471261chr6_34885150_-intronic
CAediting_471262chr6_34885170_-intronic
CAediting_471263chr6_34885189_-intronic
CAediting_471264chr6_34885196_-intronic
CAediting_471265chr6_34885206_-intronic
CAediting_471266chr6_34885274_-intronic
CAediting_471267chr6_34885717_-intronic
CAediting_471268chr6_34885722_-intronic
CAediting_471269chr6_34885723_-intronic
CAediting_471270chr6_34885729_-intronic
CAediting_471271chr6_34885739_-intronic
CAediting_471272chr6_34885753_-intronic
CAediting_471273chr6_34885756_-intronic
CAediting_471274chr6_34885802_-intronic
CAediting_471275chr6_34885809_-intronic
CAediting_471276chr6_34885823_-intronic
CAediting_471277chr6_34885859_-intronic
CAediting_471278chr6_34885877_-intronic
CAediting_471279chr6_34885878_-intronic
CAediting_471280chr6_34885903_-intronic
CAediting_471281chr6_34885915_-intronic
CAediting_471282chr6_34885928_-intronic
CAediting_471283chr6_34885936_-intronic
CAediting_471284chr6_34885939_-intronic
CAediting_471285chr6_34885962_-intronic
CAediting_471286chr6_34885965_-intronic
CAediting_471287chr6_34885979_-intronic
CAediting_471288chr6_34886000_-intronic
CAediting_471289chr6_34886006_-intronic
CAediting_471290chr6_34886016_-intronic
CAediting_471291chr6_34886019_-intronic
CAediting_471292chr6_34886028_-intronic
CAediting_471293chr6_34886041_-intronic
CAediting_471294chr6_34886045_-intronic
CAediting_471295chr6_34886046_-intronic
CAediting_471296chr6_34886052_-intronic
CAediting_471297chr6_34886065_-intronic
CAediting_471298chr6_34886066_-intronic
CAediting_471299chr6_34886071_-intronic
CAediting_471300chr6_34886081_-intronic
CAediting_471301chr6_34886082_-intronic
CAediting_471302chr6_34886090_-intronic
CAediting_471303chr6_34886120_-intronic
CAediting_471304chr6_34886122_-intronic
CAediting_471305chr6_34886192_-intronic
CAediting_471306chr6_34886193_-intronic
CAediting_471307chr6_34886210_-intronic
CAediting_471308chr6_34886219_-intronic
CAediting_471309chr6_34886245_-intronic
CAediting_471310chr6_34886275_-intronic
CAediting_471311chr6_34886282_-intronic
CAediting_471312chr6_34886283_-intronic
CAediting_471313chr6_34886373_-intronic
CAediting_471314chr6_34886463_-intronic
CAediting_471315chr6_34886465_-intronic
CAediting_471316chr6_34886473_-intronic
CAediting_471317chr6_34886499_-intronic
CAediting_471318chr6_34886526_-intronic
CAediting_471319chr6_34886531_-intronic
CAediting_471320chr6_34886533_-intronic
CAediting_471321chr6_34886538_-intronic
CAediting_471322chr6_34886542_-intronic
CAediting_471323chr6_34886549_-intronic
CAediting_471324chr6_34886555_-intronic
CAediting_471325chr6_34886562_-intronic
CAediting_471326chr6_34886563_-intronic
CAediting_471327chr6_34886571_-intronic
CAediting_471328chr6_34886574_-intronic
CAediting_471329chr6_34886575_-intronic
CAediting_471330chr6_34886577_-intronic
CAediting_471331chr6_34886587_-intronic
CAediting_471332chr6_34886590_-intronic
CAediting_471333chr6_34886594_-intronic
CAediting_471334chr6_34886604_-intronic
CAediting_471335chr6_34886630_-intronic
CAediting_471336chr6_34886633_-intronic
CAediting_471337chr6_34886634_-intronic
CAediting_471338chr6_34886635_-intronic
CAediting_471339chr6_34886636_-intronic
CAediting_471340chr6_34886639_-intronic
CAediting_471341chr6_34886641_-intronic
CAediting_471342chr6_34886645_-intronic
CAediting_471343chr6_34886648_-intronic
CAediting_471344chr6_34886659_-intronic
CAediting_471345chr6_34886670_-intronic
CAediting_471346chr6_34886690_-intronic
CAediting_471347chr6_34886693_-intronic
CAediting_471348chr6_34886733_-intronic
CAediting_471349chr6_34886738_-intronic
CAediting_471350chr6_34886739_-intronic
CAediting_471351chr6_34886747_-intronic
CAediting_471352chr6_34887047_-intronic
CAediting_471353chr6_34887059_-intronic
CAediting_471354chr6_34887060_-intronic
CAediting_471355chr6_34887061_-intronic
CAediting_471356chr6_34887110_-intronic
CAediting_471357chr6_34887119_-intronic
CAediting_471358chr6_34887134_-intronic
CAediting_471359chr6_34887136_-intronic
CAediting_471360chr6_34887139_-intronic
CAediting_471361chr6_34887145_-intronic
CAediting_471362chr6_34887153_-intronic
CAediting_471363chr6_34887154_-intronic
CAediting_471364chr6_34887172_-intronic
CAediting_471365chr6_34887178_-intronic
CAediting_471366chr6_34887180_-intronic
CAediting_471367chr6_34887186_-intronic
CAediting_471368chr6_34887190_-intronic
CAediting_471369chr6_34887202_-intronic
CAediting_471370chr6_34887239_-intronic
CAediting_471371chr6_34887240_-intronic
CAediting_471372chr6_34887245_-intronic
CAediting_471373chr6_34887256_-intronic
CAediting_471374chr6_34887264_-intronic
CAediting_471375chr6_34887267_-intronic
CAediting_471376chr6_34887268_-intronic
CAediting_471377chr6_34887270_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_471260chr6_34884203_-LINEL1L1PA12
CAediting_471261chr6_34885150_-SINEAluAluJo
CAediting_471262chr6_34885170_-SINEAluAluJo
CAediting_471263chr6_34885189_-SINEAluAluJo
CAediting_471264chr6_34885196_-SINEAluAluJo
CAediting_471265chr6_34885206_-SINEAluAluJo
CAediting_471266chr6_34885274_-LINEL1L1M5
CAediting_471267chr6_34885717_-SINEAluAluJo
CAediting_471268chr6_34885722_-SINEAluAluJo
CAediting_471269chr6_34885723_-SINEAluAluJo
CAediting_471270chr6_34885729_-SINEAluAluJo
CAediting_471271chr6_34885739_-SINEAluAluJo
CAediting_471272chr6_34885753_-SINEAluAluJo
CAediting_471273chr6_34885756_-SINEAluAluJo
CAediting_471274chr6_34885802_-SINEAluAluJo
CAediting_471275chr6_34885809_-SINEAluAluJo
CAediting_471276chr6_34885823_-SINEAluAluJo
CAediting_471277chr6_34885859_-SINEAluAluSg
CAediting_471278chr6_34885877_-SINEAluAluSg
CAediting_471279chr6_34885878_-SINEAluAluSg
CAediting_471280chr6_34885903_-SINEAluAluSg
CAediting_471281chr6_34885915_-SINEAluAluSg
CAediting_471282chr6_34885928_-SINEAluAluSg
CAediting_471283chr6_34885936_-SINEAluAluSg
CAediting_471284chr6_34885939_-SINEAluAluSg
CAediting_471285chr6_34885962_-SINEAluAluSg
CAediting_471286chr6_34885965_-SINEAluAluSg
CAediting_471287chr6_34885979_-SINEAluAluSg
CAediting_471288chr6_34886000_-SINEAluAluSg
CAediting_471289chr6_34886006_-SINEAluAluSg
CAediting_471290chr6_34886016_-SINEAluAluSg
CAediting_471291chr6_34886019_-SINEAluAluSg
CAediting_471292chr6_34886028_-SINEAluAluSg
CAediting_471293chr6_34886041_-SINEAluAluSg
CAediting_471294chr6_34886045_-SINEAluAluSg
CAediting_471295chr6_34886046_-SINEAluAluSg
CAediting_471296chr6_34886052_-SINEAluAluSg
CAediting_471297chr6_34886065_-SINEAluAluSg
CAediting_471298chr6_34886066_-SINEAluAluSg
CAediting_471299chr6_34886071_-SINEAluAluSg
CAediting_471300chr6_34886081_-SINEAluAluSg
CAediting_471301chr6_34886082_-SINEAluAluSg
CAediting_471302chr6_34886090_-SINEAluAluSg
CAediting_471303chr6_34886120_-SINEAluAluSg
CAediting_471304chr6_34886122_-SINEAluAluSg
CAediting_471305chr6_34886192_-SINEAluAluJo
CAediting_471306chr6_34886193_-SINEAluAluJo
CAediting_471307chr6_34886210_-SINEAluAluJo
CAediting_471308chr6_34886219_-SINEAluAluJo
CAediting_471309chr6_34886245_-SINEAluAluJo
CAediting_471310chr6_34886275_-SINEAluAluJo
CAediting_471311chr6_34886282_-SINEAluAluJo
CAediting_471312chr6_34886283_-SINEAluAluJo
CAediting_471313chr6_34886373_-SINEAluAluYc
CAediting_471314chr6_34886463_-SINEAluAluSx1
CAediting_471315chr6_34886465_-SINEAluAluSx1
CAediting_471316chr6_34886473_-SINEAluAluSx1
CAediting_471317chr6_34886499_-SINEAluAluSx1
CAediting_471318chr6_34886526_-SINEAluAluSx1
CAediting_471319chr6_34886531_-SINEAluAluSx1
CAediting_471320chr6_34886533_-SINEAluAluSx1
CAediting_471321chr6_34886538_-SINEAluAluSx1
CAediting_471322chr6_34886542_-SINEAluAluSx1
CAediting_471323chr6_34886549_-SINEAluAluSx1
CAediting_471324chr6_34886555_-SINEAluAluSx1
CAediting_471325chr6_34886562_-SINEAluAluSx1
CAediting_471326chr6_34886563_-SINEAluAluSx1
CAediting_471327chr6_34886571_-SINEAluAluSx1
CAediting_471328chr6_34886574_-SINEAluAluSx1
CAediting_471329chr6_34886575_-SINEAluAluSx1
CAediting_471330chr6_34886577_-SINEAluAluSx1
CAediting_471331chr6_34886587_-SINEAluAluSx1
CAediting_471332chr6_34886590_-SINEAluAluSx1
CAediting_471333chr6_34886594_-SINEAluAluSx1
CAediting_471334chr6_34886604_-SINEAluAluSx1
CAediting_471335chr6_34886630_-SINEAluAluSx1
CAediting_471336chr6_34886633_-SINEAluAluSx1
CAediting_471337chr6_34886634_-SINEAluAluSx1
CAediting_471338chr6_34886635_-SINEAluAluSx1
CAediting_471339chr6_34886636_-SINEAluAluSx1
CAediting_471340chr6_34886639_-SINEAluAluSx1
CAediting_471341chr6_34886641_-SINEAluAluSx1
CAediting_471342chr6_34886645_-SINEAluAluSx1
CAediting_471343chr6_34886648_-SINEAluAluSx1
CAediting_471344chr6_34886659_-SINEAluAluSx1
CAediting_471345chr6_34886670_-SINEAluAluSx1
CAediting_471346chr6_34886690_-SINEAluAluSx1
CAediting_471347chr6_34886693_-SINEAluAluSx1
CAediting_471348chr6_34886733_-SINEAluAluSx1
CAediting_471349chr6_34886738_-SINEAluAluSx1
CAediting_471350chr6_34886739_-SINEAluAluSx1
CAediting_471351chr6_34886747_-SINEAluAluSx1
CAediting_471352chr6_34887047_-SINEAluAluSg
CAediting_471353chr6_34887059_-SINEAluAluSg
CAediting_471354chr6_34887060_-SINEAluAluSg
CAediting_471355chr6_34887061_-SINEAluAluSg
CAediting_471356chr6_34887110_-SINEAluAluSg
CAediting_471357chr6_34887119_-SINEAluAluSg
CAediting_471358chr6_34887134_-SINEAluAluSg
CAediting_471359chr6_34887136_-SINEAluAluSg
CAediting_471360chr6_34887139_-SINEAluAluSg
CAediting_471361chr6_34887145_-SINEAluAluSg
CAediting_471362chr6_34887153_-SINEAluAluSg
CAediting_471363chr6_34887154_-SINEAluAluSg
CAediting_471364chr6_34887172_-SINEAluAluSg
CAediting_471365chr6_34887178_-SINEAluAluSg
CAediting_471366chr6_34887180_-SINEAluAluSg
CAediting_471367chr6_34887186_-SINEAluAluSg
CAediting_471368chr6_34887190_-SINEAluAluSg
CAediting_471369chr6_34887202_-SINEAluAluSg
CAediting_471370chr6_34887239_-SINEAluAluSg
CAediting_471371chr6_34887240_-SINEAluAluSg
CAediting_471372chr6_34887245_-SINEAluAluSg
CAediting_471373chr6_34887256_-SINEAluAluSg
CAediting_471374chr6_34887264_-SINEAluAluSg
CAediting_471375chr6_34887267_-SINEAluAluSg
CAediting_471376chr6_34887268_-SINEAluAluSg
CAediting_471377chr6_34887270_-SINEAluAluSg

Top

RNA A-to-I editing events in the alternative splicing sites for TAF11

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000064995.15.TAF11.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000064995.15.TAF11.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for TAF11

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for TAF11

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for TAF11

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_688081chr9_63819627_+ENSG00000064995.15ENST00000420584hsa-miR-4477b34878621348786277mer-m83487862034878639152-12.58
CAediting_1229413chr17_67471544_+ENSG00000064995.15ENST00000420584hsa-miR-548aa34878251348782577mer-m83487825034878274150-10.29
CAediting_1229413chr17_67471544_+ENSG00000064995.15ENST00000420584hsa-miR-548aa34877981348779888mer-1a3487798134878006158-16.88
CAediting_77128chr1_85133844_+ENSG00000064995.15ENST00000420584hsa-miR-4423-3p34878108348781147mer-m83487810734878127140-12.31
CAediting_228905chr2_188297554_+ENSG00000064995.15ENST00000420584hsa-miR-561-3p34878451348784577mer-m83487845034878475149-15.38

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229413chr17_67471544_+ENSG00000064995.15ENST00000420584hsa-miR-548aa34877929348779368mer-1a3487792934877953146-9
CAediting_1229414chr17_67471546_+ENSG00000064995.15ENST00000420584hsa-miR-548aa34877929348779368mer-1a3487792934877953146-9
CAediting_1229415chr17_67471547_+ENSG00000064995.15ENST00000420584hsa-miR-548aa34877929348779368mer-1a3487792934877953146-9
CAediting_228905chr2_188297554_+ENSG00000064995.15ENST00000420584hsa-miR-561-3p34877904348779107mer-m83487790334877924145-4.45

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for TAF11

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

Top

Relation with ADAR for TAF11

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
STADCAediting_471287chr6_34885979_-....0.015240785536730.328678467337869
STADCAediting_471304chr6_34886122_-..0.02733341823585820.280313949373347..

Top

Relation with cancer stages for TAF11

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
STADpathologic_stageCAediting_471368chr6_34887190_-0.01069112779699170.327297615830762

Top

Relation with survival for TAF11

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

Top

RelatedDrugs for TAF11

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for TAF11

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource