Home

Download

Statistics

Examples

Help

Contact

Editing gene: TAF6 (CAeditome ID:6878)

Gene summary for TAF6

Gene summary

Gene information	Gene symbol	TAF6
	Gene ID	6878
	Gene name	TATA-box binding protein associated factor 6
	Synonyms	ALYUS\|MGC:8964\|TAF(II)70\|TAF(II)80\|TAF2E\|TAFII-70\|TAFII-80\|TAFII70\|TAFII80\|TAFII85
	Cytomap	7q22.1
	Type of gene	protein-coding
	Description	transcription initiation factor TFIID subunit 6RNA polymerase II TBP-associated factor subunit ETAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDaTATA box binding protein (TBP)-associated factor, RNA polymerase II, E, 70/85
	Modification date	20210518
	UniProtAcc	P49848
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
TAF6	GO:0016251	Transcription initiation factor TFIID subunit 6	9603525
TAF6	GO:0003677	Transcription initiation factor TFIID subunit 6	15601843
TAF6	GO:0016251	Transcription initiation factor TFIID subunit 6	15328371
TAF6	GO:0006352	Transcription initiation factor TFIID subunit 6	9603525
TAF6	GO:0006367	Transcription initiation factor TFIID subunit 6	15328371
TAF6	GO:0006367	Transcription initiation factor TFIID subunit 6	9603525
TAF6	GO:0045786	Transcription initiation factor TFIID subunit 6	15328371
TAF6	GO:0005654	Transcription initiation factor TFIID subunit 6	0000052
TAF6	GO:0005829	Transcription initiation factor TFIID subunit 6	0000052
TAF6	GO:0005669	Transcription initiation factor TFIID subunit 6	14580349
TAF6	GO:0005669	Transcription initiation factor TFIID subunit 6	27007846
TAF6	GO:0005669	Transcription initiation factor TFIID subunit 6	29111974
TAF6	GO:0033276	Transcription initiation factor TFIID subunit 6	9603525
TAF6	GO:0071339	Transcription initiation factor TFIID subunit 6	15960975

Top

RNA A-to-I events for TAF6

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000106290.13

RNA A-to-I editing events in Cancer.

CAediting_579748(100111466, -), CAediting_579749(100111481, -), CAediting_579750(100111497, -), CAediting_579751(100111513, -), CAediting_579752(100113002, -), CAediting_579753(100113021, -), CAediting_579754(100114427, -), CAediting_579755(100114460, -), CAediting_579756(100114475, -), CAediting_579757(100114476, -), CAediting_579758(100114477, -), CAediting_579759(100114503, -), CAediting_579760(100114528, -), CAediting_579761(100114552, -), CAediting_579762(100114598, -), CAediting_579763(100114608, -), CAediting_579764(100114611, -), CAediting_579765(100114702, -), CAediting_579766(100114758, -), CAediting_579767(100114761, -), CAediting_579768(100114772, -), CAediting_579769(100114785, -), CAediting_579770(100114797, -), CAediting_579771(100114811, -), CAediting_579772(100114823, -), CAediting_579773(100114891, -), CAediting_579774(100114894, -), CAediting_579775(100114896, -), CAediting_579776(100114897, -), CAediting_579777(100114899, -), CAediting_579778(100114985, -), CAediting_579779(100114989, -), CAediting_579780(100114995, -), CAediting_579781(100114997, -), CAediting_579782(100115003, -), CAediting_579783(100115005, -), CAediting_579784(100115011, -), CAediting_579785(100115024, -), CAediting_579786(100115025, -), CAediting_579787(100115060, -), CAediting_579788(100115064, -), CAediting_579789(100115074, -), CAediting_579790(100115079, -), CAediting_579791(100115085, -), CAediting_579792(100115088, -), CAediting_579793(100115107, -), CAediting_579794(100115110, -), CAediting_579795(100115125, -), CAediting_579796(100115127, -), CAediting_579797(100115133, -), CAediting_579798(100115134, -), CAediting_579799(100115142, -), CAediting_579800(100115168, -), CAediting_579801(100115169, -), CAediting_579802(100115173, -), CAediting_579803(100115174, -), CAediting_579804(100115175, -), CAediting_579805(100115176, -), CAediting_579806(100115179, -), CAediting_579807(100115181, -), CAediting_579808(100115182, -), CAediting_579809(100115209, -), CAediting_579810(100115259, -), CAediting_579811(100115265, -), CAediting_579812(100115273, -), CAediting_579813(100115287, -), CAediting_579814(100115418, -), CAediting_579815(100115419, -), CAediting_579816(100115432, -), CAediting_579817(100115444, -), CAediting_579818(100115445, -), CAediting_579819(100115470, -), CAediting_579820(100115490, -), CAediting_579821(100115491, -), CAediting_579822(100115496, -), CAediting_579823(100115513, -), CAediting_579824(100115518, -), CAediting_579825(100115540, -), CAediting_579826(100115554, -), CAediting_579827(100115562, -), CAediting_579828(100115579, -), CAediting_579829(100115580, -), CAediting_579830(100115610, -), CAediting_579831(100115616, -), CAediting_579832(100115728, -), CAediting_579833(100115791, -), CAediting_579834(100115801, -), CAediting_579835(100115803, -), CAediting_579836(100115805, -), CAediting_579837(100115808, -), CAediting_579838(100115823, -), CAediting_579839(100115827, -), CAediting_579840(100115849, -), CAediting_579841(100115859, -), CAediting_579842(100115862, -), CAediting_579843(100115871, -), CAediting_579844(100115888, -), CAediting_579845(100115895, -), CAediting_579846(100115902, -), CAediting_579847(100115927, -), CAediting_579848(100116265, -), CAediting_579849(100116292, -), CAediting_579850(100116304, -), CAediting_579851(100116305, -), CAediting_579852(100116310, -), CAediting_579853(100116311, -), CAediting_579854(100116321, -), CAediting_579855(100116394, -), CAediting_579856(100116417, -), CAediting_579857(100116447, -), CAediting_579858(100116467, -), CAediting_579859(100116517, -), CAediting_579860(100116552, -), CAediting_579861(100116982, -), CAediting_579862(100116991, -), CAediting_579863(100117003, -), CAediting_579864(100117018, -), CAediting_579865(100117083, -), CAediting_579866(100117089, -), CAediting_579867(100117102, -), CAediting_579868(100117114, -), CAediting_579869(100117124, -), CAediting_579870(100117137, -), CAediting_579871(100117146, -), CAediting_579872(100117160, -), CAediting_579873(100117163, -), CAediting_579874(100117164, -), CAediting_579875(100117177, -), CAediting_579876(100117183, -), CAediting_579877(100117189, -), CAediting_579878(100117193, -), CAediting_579879(100117200, -), CAediting_579880(100117202, -), CAediting_579881(100117231, -), CAediting_579882(100117299, -), CAediting_579883(100117337, -), CAediting_579884(100117339, -), CAediting_579885(100117340, -), CAediting_579886(100117344, -), CAediting_579887(100117361, -), CAediting_579888(100117369, -), CAediting_579889(100117377, -), CAediting_579890(100117387, -), CAediting_579891(100117396, -), CAediting_579892(100117400, -), CAediting_579893(100117409, -), CAediting_579894(100117432, -), CAediting_579895(100117436, -), CAediting_579896(100117439, -), CAediting_579897(100117440, -), CAediting_579898(100117450, -), CAediting_579899(100117454, -), CAediting_579900(100117467, -), CAediting_579901(100117479, -), CAediting_579902(100117491, -), CAediting_579903(100117499, -), CAediting_579904(100117504, -), CAediting_579905(100117511, -), CAediting_579906(100117523, -), CAediting_579907(100117777, -), CAediting_579908(100117786, -), CAediting_579909(100117798, -), CAediting_579910(100117799, -), CAediting_579911(100117800, -), CAediting_579912(100117853, -), CAediting_579913(100117861, -), CAediting_579914(100117868, -), CAediting_579915(100117875, -), CAediting_579916(100117878, -), CAediting_579917(100117894, -), CAediting_579918(100117895, -), CAediting_579919(100118135, -), CAediting_579920(100118140, -), CAediting_579921(100118141, -), CAediting_579922(100118231, -), CAediting_579923(100118308, -), CAediting_579924(100118439, -), CAediting_579925(100118489, -), CAediting_579926(100118492, -), CAediting_579927(100118525, -), CAediting_579928(100118533, -), CAediting_579929(100118535, -), CAediting_579930(100118545, -), CAediting_579931(100118548, -), CAediting_579932(100118575, -), CAediting_579933(100118580, -), CAediting_579934(100118587, -), CAediting_579935(100118588, -), CAediting_579936(100118595, -), CAediting_579937(100118610, -), CAediting_579938(100118613, -), CAediting_579939(100118619, -), CAediting_579940(100118631, -), CAediting_579941(100118635, -),

Top

RNA editing positional annotations for TAF6 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_579748	chr7_100111466_-	intronic
CAediting_579749	chr7_100111481_-	intronic
CAediting_579750	chr7_100111497_-	intronic
CAediting_579751	chr7_100111513_-	intronic
CAediting_579752	chr7_100113002_-	ncRNA_intronic
CAediting_579753	chr7_100113021_-	ncRNA_intronic
CAediting_579754	chr7_100114427_-	ncRNA_intronic
CAediting_579755	chr7_100114460_-	ncRNA_intronic
CAediting_579756	chr7_100114475_-	ncRNA_intronic
CAediting_579757	chr7_100114476_-	ncRNA_intronic
CAediting_579758	chr7_100114477_-	ncRNA_intronic
CAediting_579759	chr7_100114503_-	ncRNA_intronic
CAediting_579760	chr7_100114528_-	ncRNA_intronic
CAediting_579761	chr7_100114552_-	ncRNA_intronic
CAediting_579762	chr7_100114598_-	ncRNA_intronic
CAediting_579763	chr7_100114608_-	ncRNA_intronic
CAediting_579764	chr7_100114611_-	ncRNA_intronic
CAediting_579765	chr7_100114702_-	ncRNA_intronic
CAediting_579766	chr7_100114758_-	ncRNA_intronic
CAediting_579767	chr7_100114761_-	ncRNA_intronic
CAediting_579768	chr7_100114772_-	ncRNA_intronic
CAediting_579769	chr7_100114785_-	ncRNA_intronic
CAediting_579770	chr7_100114797_-	ncRNA_intronic
CAediting_579771	chr7_100114811_-	ncRNA_intronic
CAediting_579772	chr7_100114823_-	ncRNA_intronic
CAediting_579773	chr7_100114891_-	ncRNA_intronic
CAediting_579774	chr7_100114894_-	ncRNA_intronic
CAediting_579775	chr7_100114896_-	ncRNA_intronic
CAediting_579776	chr7_100114897_-	ncRNA_intronic
CAediting_579777	chr7_100114899_-	ncRNA_intronic
CAediting_579778	chr7_100114985_-	ncRNA_intronic
CAediting_579779	chr7_100114989_-	ncRNA_intronic
CAediting_579780	chr7_100114995_-	ncRNA_intronic
CAediting_579781	chr7_100114997_-	ncRNA_intronic
CAediting_579782	chr7_100115003_-	ncRNA_intronic
CAediting_579783	chr7_100115005_-	ncRNA_intronic
CAediting_579784	chr7_100115011_-	ncRNA_intronic
CAediting_579785	chr7_100115024_-	ncRNA_intronic
CAediting_579786	chr7_100115025_-	ncRNA_intronic
CAediting_579787	chr7_100115060_-	ncRNA_intronic
CAediting_579788	chr7_100115064_-	ncRNA_intronic
CAediting_579789	chr7_100115074_-	ncRNA_intronic
CAediting_579790	chr7_100115079_-	ncRNA_intronic
CAediting_579791	chr7_100115085_-	ncRNA_intronic
CAediting_579792	chr7_100115088_-	ncRNA_intronic
CAediting_579793	chr7_100115107_-	ncRNA_intronic
CAediting_579794	chr7_100115110_-	ncRNA_intronic
CAediting_579795	chr7_100115125_-	ncRNA_intronic
CAediting_579796	chr7_100115127_-	ncRNA_intronic
CAediting_579797	chr7_100115133_-	ncRNA_intronic
CAediting_579798	chr7_100115134_-	ncRNA_intronic
CAediting_579799	chr7_100115142_-	ncRNA_intronic
CAediting_579800	chr7_100115168_-	ncRNA_intronic
CAediting_579801	chr7_100115169_-	ncRNA_intronic
CAediting_579802	chr7_100115173_-	ncRNA_intronic
CAediting_579803	chr7_100115174_-	ncRNA_intronic
CAediting_579804	chr7_100115175_-	ncRNA_intronic
CAediting_579805	chr7_100115176_-	ncRNA_intronic
CAediting_579806	chr7_100115179_-	ncRNA_intronic
CAediting_579807	chr7_100115181_-	ncRNA_intronic
CAediting_579808	chr7_100115182_-	ncRNA_intronic
CAediting_579809	chr7_100115209_-	ncRNA_intronic
CAediting_579810	chr7_100115259_-	ncRNA_exonic
CAediting_579811	chr7_100115265_-	ncRNA_exonic
CAediting_579812	chr7_100115273_-	ncRNA_exonic
CAediting_579813	chr7_100115287_-	ncRNA_exonic
CAediting_579814	chr7_100115418_-	ncRNA_exonic
CAediting_579815	chr7_100115419_-	ncRNA_exonic
CAediting_579816	chr7_100115432_-	ncRNA_exonic
CAediting_579817	chr7_100115444_-	ncRNA_exonic
CAediting_579818	chr7_100115445_-	ncRNA_exonic
CAediting_579819	chr7_100115470_-	ncRNA_exonic
CAediting_579820	chr7_100115490_-	ncRNA_exonic
CAediting_579821	chr7_100115491_-	ncRNA_exonic
CAediting_579822	chr7_100115496_-	ncRNA_exonic
CAediting_579823	chr7_100115513_-	ncRNA_exonic
CAediting_579824	chr7_100115518_-	ncRNA_exonic
CAediting_579825	chr7_100115540_-	ncRNA_exonic
CAediting_579826	chr7_100115554_-	ncRNA_exonic
CAediting_579827	chr7_100115562_-	ncRNA_exonic
CAediting_579828	chr7_100115579_-	ncRNA_exonic
CAediting_579829	chr7_100115580_-	ncRNA_exonic
CAediting_579830	chr7_100115610_-	ncRNA_exonic
CAediting_579831	chr7_100115616_-	ncRNA_exonic
CAediting_579832	chr7_100115728_-	ncRNA_intronic
CAediting_579833	chr7_100115791_-	ncRNA_intronic
CAediting_579834	chr7_100115801_-	ncRNA_intronic
CAediting_579835	chr7_100115803_-	ncRNA_intronic
CAediting_579836	chr7_100115805_-	ncRNA_intronic
CAediting_579837	chr7_100115808_-	ncRNA_intronic
CAediting_579838	chr7_100115823_-	ncRNA_intronic
CAediting_579839	chr7_100115827_-	ncRNA_intronic
CAediting_579840	chr7_100115849_-	ncRNA_intronic
CAediting_579841	chr7_100115859_-	ncRNA_intronic
CAediting_579842	chr7_100115862_-	ncRNA_intronic
CAediting_579843	chr7_100115871_-	ncRNA_intronic
CAediting_579844	chr7_100115888_-	ncRNA_intronic
CAediting_579845	chr7_100115895_-	ncRNA_intronic
CAediting_579846	chr7_100115902_-	ncRNA_intronic
CAediting_579847	chr7_100115927_-	ncRNA_intronic
CAediting_579848	chr7_100116265_-	ncRNA_intronic
CAediting_579849	chr7_100116292_-	ncRNA_intronic
CAediting_579850	chr7_100116304_-	ncRNA_intronic
CAediting_579851	chr7_100116305_-	ncRNA_intronic
CAediting_579852	chr7_100116310_-	ncRNA_intronic
CAediting_579853	chr7_100116311_-	ncRNA_intronic
CAediting_579854	chr7_100116321_-	ncRNA_intronic
CAediting_579855	chr7_100116394_-	ncRNA_intronic
CAediting_579856	chr7_100116417_-	ncRNA_intronic
CAediting_579857	chr7_100116447_-	ncRNA_intronic
CAediting_579858	chr7_100116467_-	ncRNA_intronic
CAediting_579859	chr7_100116517_-	ncRNA_intronic
CAediting_579860	chr7_100116552_-	ncRNA_intronic
CAediting_579861	chr7_100116982_-	ncRNA_intronic
CAediting_579862	chr7_100116991_-	ncRNA_intronic
CAediting_579863	chr7_100117003_-	ncRNA_intronic
CAediting_579864	chr7_100117018_-	ncRNA_intronic
CAediting_579865	chr7_100117083_-	ncRNA_intronic
CAediting_579866	chr7_100117089_-	ncRNA_intronic
CAediting_579867	chr7_100117102_-	ncRNA_intronic
CAediting_579868	chr7_100117114_-	ncRNA_intronic
CAediting_579869	chr7_100117124_-	ncRNA_intronic
CAediting_579870	chr7_100117137_-	ncRNA_intronic
CAediting_579871	chr7_100117146_-	ncRNA_intronic
CAediting_579872	chr7_100117160_-	ncRNA_intronic
CAediting_579873	chr7_100117163_-	ncRNA_intronic
CAediting_579874	chr7_100117164_-	ncRNA_intronic
CAediting_579875	chr7_100117177_-	ncRNA_intronic
CAediting_579876	chr7_100117183_-	ncRNA_intronic
CAediting_579877	chr7_100117189_-	ncRNA_intronic
CAediting_579878	chr7_100117193_-	ncRNA_intronic
CAediting_579879	chr7_100117200_-	ncRNA_intronic
CAediting_579880	chr7_100117202_-	ncRNA_intronic
CAediting_579881	chr7_100117231_-	ncRNA_intronic
CAediting_579882	chr7_100117299_-	ncRNA_intronic
CAediting_579883	chr7_100117337_-	ncRNA_intronic
CAediting_579884	chr7_100117339_-	ncRNA_intronic
CAediting_579885	chr7_100117340_-	ncRNA_intronic
CAediting_579886	chr7_100117344_-	ncRNA_intronic
CAediting_579887	chr7_100117361_-	ncRNA_intronic
CAediting_579888	chr7_100117369_-	ncRNA_intronic
CAediting_579889	chr7_100117377_-	ncRNA_intronic
CAediting_579890	chr7_100117387_-	ncRNA_intronic
CAediting_579891	chr7_100117396_-	ncRNA_intronic
CAediting_579892	chr7_100117400_-	ncRNA_intronic
CAediting_579893	chr7_100117409_-	ncRNA_intronic
CAediting_579894	chr7_100117432_-	ncRNA_intronic
CAediting_579895	chr7_100117436_-	ncRNA_intronic
CAediting_579896	chr7_100117439_-	ncRNA_intronic
CAediting_579897	chr7_100117440_-	ncRNA_intronic
CAediting_579898	chr7_100117450_-	ncRNA_intronic
CAediting_579899	chr7_100117454_-	ncRNA_intronic
CAediting_579900	chr7_100117467_-	ncRNA_intronic
CAediting_579901	chr7_100117479_-	ncRNA_intronic
CAediting_579902	chr7_100117491_-	ncRNA_intronic
CAediting_579903	chr7_100117499_-	ncRNA_intronic
CAediting_579904	chr7_100117504_-	ncRNA_intronic
CAediting_579905	chr7_100117511_-	ncRNA_intronic
CAediting_579906	chr7_100117523_-	ncRNA_intronic
CAediting_579907	chr7_100117777_-	ncRNA_intronic
CAediting_579908	chr7_100117786_-	ncRNA_intronic
CAediting_579909	chr7_100117798_-	ncRNA_intronic
CAediting_579910	chr7_100117799_-	ncRNA_intronic
CAediting_579911	chr7_100117800_-	ncRNA_intronic
CAediting_579912	chr7_100117853_-	ncRNA_intronic
CAediting_579913	chr7_100117861_-	ncRNA_intronic
CAediting_579914	chr7_100117868_-	ncRNA_intronic
CAediting_579915	chr7_100117875_-	ncRNA_intronic
CAediting_579916	chr7_100117878_-	ncRNA_intronic
CAediting_579917	chr7_100117894_-	ncRNA_intronic
CAediting_579918	chr7_100117895_-	ncRNA_intronic
CAediting_579919	chr7_100118135_-	ncRNA_intronic
CAediting_579920	chr7_100118140_-	ncRNA_intronic
CAediting_579921	chr7_100118141_-	ncRNA_intronic
CAediting_579922	chr7_100118231_-	ncRNA_intronic
CAediting_579923	chr7_100118308_-	ncRNA_intronic
CAediting_579924	chr7_100118439_-	ncRNA_exonic
CAediting_579925	chr7_100118489_-	ncRNA_exonic
CAediting_579926	chr7_100118492_-	ncRNA_exonic
CAediting_579927	chr7_100118525_-	ncRNA_exonic
CAediting_579928	chr7_100118533_-	ncRNA_exonic
CAediting_579929	chr7_100118535_-	ncRNA_exonic
CAediting_579930	chr7_100118545_-	ncRNA_exonic
CAediting_579931	chr7_100118548_-	ncRNA_exonic
CAediting_579932	chr7_100118575_-	ncRNA_exonic
CAediting_579933	chr7_100118580_-	ncRNA_exonic
CAediting_579934	chr7_100118587_-	ncRNA_exonic
CAediting_579935	chr7_100118588_-	ncRNA_exonic
CAediting_579936	chr7_100118595_-	ncRNA_exonic
CAediting_579937	chr7_100118610_-	ncRNA_exonic
CAediting_579938	chr7_100118613_-	ncRNA_exonic
CAediting_579939	chr7_100118619_-	ncRNA_exonic
CAediting_579940	chr7_100118631_-	ncRNA_exonic
CAediting_579941	chr7_100118635_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_579748	chr7_100111466_-	SINE	Alu	AluJo
CAediting_579749	chr7_100111481_-	SINE	Alu	AluJo
CAediting_579750	chr7_100111497_-	SINE	Alu	AluJo
CAediting_579751	chr7_100111513_-	SINE	Alu	AluJo
CAediting_579752	chr7_100113002_-	SINE	Alu	AluSx3
CAediting_579753	chr7_100113021_-	SINE	Alu	AluSx3
CAediting_579755	chr7_100114460_-	SINE	Alu	AluSz
CAediting_579756	chr7_100114475_-	SINE	Alu	AluSz
CAediting_579757	chr7_100114476_-	SINE	Alu	AluSz
CAediting_579758	chr7_100114477_-	SINE	Alu	AluSz
CAediting_579759	chr7_100114503_-	SINE	Alu	AluSz
CAediting_579760	chr7_100114528_-	SINE	Alu	AluSz
CAediting_579761	chr7_100114552_-	SINE	Alu	AluSz
CAediting_579762	chr7_100114598_-	SINE	Alu	AluSz
CAediting_579763	chr7_100114608_-	SINE	Alu	AluSz
CAediting_579764	chr7_100114611_-	SINE	Alu	AluSz
CAediting_579765	chr7_100114702_-	SINE	Alu	AluSz
CAediting_579766	chr7_100114758_-	SINE	Alu	AluJo
CAediting_579767	chr7_100114761_-	SINE	Alu	AluJo
CAediting_579768	chr7_100114772_-	SINE	Alu	AluJo
CAediting_579769	chr7_100114785_-	SINE	Alu	AluJo
CAediting_579770	chr7_100114797_-	SINE	Alu	AluJo
CAediting_579771	chr7_100114811_-	SINE	Alu	AluJo
CAediting_579772	chr7_100114823_-	SINE	Alu	AluJo
CAediting_579773	chr7_100114891_-	SINE	Alu	AluJo
CAediting_579774	chr7_100114894_-	SINE	Alu	AluJo
CAediting_579775	chr7_100114896_-	SINE	Alu	AluJo
CAediting_579776	chr7_100114897_-	SINE	Alu	AluJo
CAediting_579777	chr7_100114899_-	SINE	Alu	AluJo
CAediting_579778	chr7_100114985_-	SINE	Alu	AluJo
CAediting_579779	chr7_100114989_-	SINE	Alu	AluJo
CAediting_579780	chr7_100114995_-	SINE	Alu	AluJo
CAediting_579781	chr7_100114997_-	SINE	Alu	AluJo
CAediting_579782	chr7_100115003_-	SINE	Alu	AluJo
CAediting_579783	chr7_100115005_-	SINE	Alu	AluJo
CAediting_579784	chr7_100115011_-	SINE	Alu	AluJo
CAediting_579785	chr7_100115024_-	SINE	Alu	AluJo
CAediting_579786	chr7_100115025_-	SINE	Alu	AluJo
CAediting_579787	chr7_100115060_-	SINE	Alu	AluJo
CAediting_579788	chr7_100115064_-	SINE	Alu	AluJo
CAediting_579789	chr7_100115074_-	SINE	Alu	AluJo
CAediting_579790	chr7_100115079_-	SINE	Alu	AluJo
CAediting_579791	chr7_100115085_-	SINE	Alu	AluJo
CAediting_579792	chr7_100115088_-	SINE	Alu	AluJo
CAediting_579793	chr7_100115107_-	SINE	Alu	AluJo
CAediting_579794	chr7_100115110_-	SINE	Alu	AluJo
CAediting_579795	chr7_100115125_-	SINE	Alu	AluJo
CAediting_579796	chr7_100115127_-	SINE	Alu	AluJo
CAediting_579797	chr7_100115133_-	SINE	Alu	AluJo
CAediting_579798	chr7_100115134_-	SINE	Alu	AluJo
CAediting_579799	chr7_100115142_-	SINE	Alu	AluJo
CAediting_579800	chr7_100115168_-	SINE	Alu	AluJo
CAediting_579801	chr7_100115169_-	SINE	Alu	AluJo
CAediting_579802	chr7_100115173_-	SINE	Alu	AluJo
CAediting_579803	chr7_100115174_-	SINE	Alu	AluJo
CAediting_579804	chr7_100115175_-	SINE	Alu	AluJo
CAediting_579805	chr7_100115176_-	SINE	Alu	AluJo
CAediting_579806	chr7_100115179_-	SINE	Alu	AluJo
CAediting_579807	chr7_100115181_-	SINE	Alu	AluJo
CAediting_579808	chr7_100115182_-	SINE	Alu	AluJo
CAediting_579809	chr7_100115209_-	SINE	Alu	AluJo
CAediting_579810	chr7_100115259_-	SINE	Alu	AluJo
CAediting_579811	chr7_100115265_-	SINE	Alu	AluJo
CAediting_579812	chr7_100115273_-	SINE	Alu	AluJo
CAediting_579813	chr7_100115287_-	SINE	Alu	AluJo
CAediting_579814	chr7_100115418_-	SINE	Alu	AluSz
CAediting_579815	chr7_100115419_-	SINE	Alu	AluSz
CAediting_579816	chr7_100115432_-	SINE	Alu	AluSz
CAediting_579817	chr7_100115444_-	SINE	Alu	AluSz
CAediting_579818	chr7_100115445_-	SINE	Alu	AluSz
CAediting_579819	chr7_100115470_-	SINE	Alu	AluSz
CAediting_579820	chr7_100115490_-	SINE	Alu	AluSz
CAediting_579821	chr7_100115491_-	SINE	Alu	AluSz
CAediting_579822	chr7_100115496_-	SINE	Alu	AluSz
CAediting_579823	chr7_100115513_-	SINE	Alu	AluSz
CAediting_579824	chr7_100115518_-	SINE	Alu	AluSz
CAediting_579825	chr7_100115540_-	SINE	Alu	AluSz
CAediting_579826	chr7_100115554_-	SINE	Alu	AluSz
CAediting_579827	chr7_100115562_-	SINE	Alu	AluSz
CAediting_579828	chr7_100115579_-	SINE	Alu	AluSz
CAediting_579829	chr7_100115580_-	SINE	Alu	AluSz
CAediting_579830	chr7_100115610_-	SINE	Alu	AluSz
CAediting_579831	chr7_100115616_-	SINE	Alu	AluSz
CAediting_579832	chr7_100115728_-	SINE	Alu	AluSc
CAediting_579833	chr7_100115791_-	SINE	Alu	AluSc
CAediting_579834	chr7_100115801_-	SINE	Alu	AluSc
CAediting_579835	chr7_100115803_-	SINE	Alu	AluSc
CAediting_579836	chr7_100115805_-	SINE	Alu	AluSc
CAediting_579837	chr7_100115808_-	SINE	Alu	AluSc
CAediting_579838	chr7_100115823_-	SINE	Alu	AluSc
CAediting_579839	chr7_100115827_-	SINE	Alu	AluSc
CAediting_579840	chr7_100115849_-	SINE	Alu	AluSc
CAediting_579841	chr7_100115859_-	SINE	Alu	AluSc
CAediting_579842	chr7_100115862_-	SINE	Alu	AluSc
CAediting_579843	chr7_100115871_-	SINE	Alu	AluSc
CAediting_579844	chr7_100115888_-	SINE	Alu	AluSc
CAediting_579845	chr7_100115895_-	SINE	Alu	AluSc
CAediting_579846	chr7_100115902_-	SINE	Alu	AluSc
CAediting_579847	chr7_100115927_-	SINE	Alu	AluSc
CAediting_579848	chr7_100116265_-	SINE	Alu	AluJo
CAediting_579849	chr7_100116292_-	SINE	Alu	AluJo
CAediting_579850	chr7_100116304_-	SINE	Alu	AluJo
CAediting_579851	chr7_100116305_-	SINE	Alu	AluJo
CAediting_579852	chr7_100116310_-	SINE	Alu	AluJo
CAediting_579853	chr7_100116311_-	SINE	Alu	AluJo
CAediting_579854	chr7_100116321_-	SINE	Alu	AluJo
CAediting_579855	chr7_100116394_-	SINE	Alu	AluSx1
CAediting_579856	chr7_100116417_-	SINE	Alu	AluSx1
CAediting_579857	chr7_100116447_-	SINE	Alu	AluSx1
CAediting_579858	chr7_100116467_-	SINE	Alu	AluSx1
CAediting_579859	chr7_100116517_-	SINE	Alu	AluSx1
CAediting_579860	chr7_100116552_-	SINE	Alu	AluSx1
CAediting_579861	chr7_100116982_-	SINE	Alu	AluSc
CAediting_579862	chr7_100116991_-	SINE	Alu	AluSc
CAediting_579863	chr7_100117003_-	SINE	Alu	AluSc
CAediting_579864	chr7_100117018_-	SINE	Alu	AluSc
CAediting_579865	chr7_100117083_-	SINE	Alu	AluSc
CAediting_579866	chr7_100117089_-	SINE	Alu	AluSc
CAediting_579867	chr7_100117102_-	SINE	Alu	AluSc
CAediting_579868	chr7_100117114_-	SINE	Alu	AluSc
CAediting_579869	chr7_100117124_-	SINE	Alu	AluSc
CAediting_579870	chr7_100117137_-	SINE	Alu	AluSc
CAediting_579871	chr7_100117146_-	SINE	Alu	AluSc
CAediting_579872	chr7_100117160_-	SINE	Alu	AluSc
CAediting_579873	chr7_100117163_-	SINE	Alu	AluSc
CAediting_579874	chr7_100117164_-	SINE	Alu	AluSc
CAediting_579875	chr7_100117177_-	SINE	Alu	AluSc
CAediting_579876	chr7_100117183_-	SINE	Alu	AluSc
CAediting_579877	chr7_100117189_-	SINE	Alu	AluSc
CAediting_579878	chr7_100117193_-	SINE	Alu	AluSc
CAediting_579879	chr7_100117200_-	SINE	Alu	AluSc
CAediting_579880	chr7_100117202_-	SINE	Alu	AluSc
CAediting_579881	chr7_100117231_-	SINE	Alu	AluSc
CAediting_579882	chr7_100117299_-	SINE	Alu	AluSq2
CAediting_579883	chr7_100117337_-	SINE	Alu	AluSq2
CAediting_579884	chr7_100117339_-	SINE	Alu	AluSq2
CAediting_579885	chr7_100117340_-	SINE	Alu	AluSq2
CAediting_579886	chr7_100117344_-	SINE	Alu	AluSq2
CAediting_579887	chr7_100117361_-	SINE	Alu	AluSq2
CAediting_579888	chr7_100117369_-	SINE	Alu	AluSq2
CAediting_579889	chr7_100117377_-	SINE	Alu	AluSq2
CAediting_579890	chr7_100117387_-	SINE	Alu	AluSq2
CAediting_579891	chr7_100117396_-	SINE	Alu	AluSq2
CAediting_579892	chr7_100117400_-	SINE	Alu	AluSq2
CAediting_579893	chr7_100117409_-	SINE	Alu	AluSq2
CAediting_579894	chr7_100117432_-	SINE	Alu	AluSq2
CAediting_579895	chr7_100117436_-	SINE	Alu	AluSq2
CAediting_579896	chr7_100117439_-	SINE	Alu	AluSq2
CAediting_579897	chr7_100117440_-	SINE	Alu	AluSq2
CAediting_579898	chr7_100117450_-	SINE	Alu	AluSq2
CAediting_579899	chr7_100117454_-	SINE	Alu	AluSq2
CAediting_579900	chr7_100117467_-	SINE	Alu	AluSq2
CAediting_579901	chr7_100117479_-	SINE	Alu	AluSq2
CAediting_579902	chr7_100117491_-	SINE	Alu	AluSq2
CAediting_579903	chr7_100117499_-	SINE	Alu	AluSq2
CAediting_579904	chr7_100117504_-	SINE	Alu	AluSq2
CAediting_579905	chr7_100117511_-	SINE	Alu	AluSq2
CAediting_579906	chr7_100117523_-	SINE	Alu	AluSq2
CAediting_579907	chr7_100117777_-	SINE	Alu	AluY
CAediting_579908	chr7_100117786_-	SINE	Alu	AluY
CAediting_579909	chr7_100117798_-	SINE	Alu	AluY
CAediting_579910	chr7_100117799_-	SINE	Alu	AluY
CAediting_579911	chr7_100117800_-	SINE	Alu	AluY
CAediting_579912	chr7_100117853_-	SINE	Alu	AluY
CAediting_579913	chr7_100117861_-	SINE	Alu	AluY
CAediting_579914	chr7_100117868_-	SINE	Alu	AluY
CAediting_579915	chr7_100117875_-	SINE	Alu	AluY
CAediting_579916	chr7_100117878_-	SINE	Alu	AluY
CAediting_579917	chr7_100117894_-	SINE	Alu	AluY
CAediting_579918	chr7_100117895_-	SINE	Alu	AluY
CAediting_579919	chr7_100118135_-	SINE	Alu	AluSx1
CAediting_579920	chr7_100118140_-	SINE	Alu	AluSx1
CAediting_579921	chr7_100118141_-	SINE	Alu	AluSx1
CAediting_579922	chr7_100118231_-	SINE	Alu	AluSx1
CAediting_579923	chr7_100118308_-	SINE	Alu	AluSx1
CAediting_579924	chr7_100118439_-	SINE	Alu	AluJr
CAediting_579925	chr7_100118489_-	SINE	Alu	AluJr
CAediting_579926	chr7_100118492_-	SINE	Alu	AluJr
CAediting_579927	chr7_100118525_-	SINE	Alu	AluJr
CAediting_579928	chr7_100118533_-	SINE	Alu	AluJr
CAediting_579929	chr7_100118535_-	SINE	Alu	AluJr
CAediting_579930	chr7_100118545_-	SINE	Alu	AluJr
CAediting_579931	chr7_100118548_-	SINE	Alu	AluJr
CAediting_579932	chr7_100118575_-	SINE	Alu	AluJr
CAediting_579933	chr7_100118580_-	SINE	Alu	AluJr
CAediting_579934	chr7_100118587_-	SINE	Alu	AluJr
CAediting_579935	chr7_100118588_-	SINE	Alu	AluJr
CAediting_579936	chr7_100118595_-	SINE	Alu	AluJr
CAediting_579937	chr7_100118610_-	SINE	Alu	AluJr
CAediting_579938	chr7_100118613_-	SINE	Alu	AluJr
CAediting_579939	chr7_100118619_-	SINE	Alu	AluJr
CAediting_579940	chr7_100118631_-	SINE	Alu	AluJr
CAediting_579941	chr7_100118635_-	SINE	Alu	AluJr

Top

RNA A-to-I editing events in the alternative splicing sites for TAF6

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000106290.13.TAF6.

Correlation between RNA A-to-I editing and PSI for ENSG00000106290.13.TAF6.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for TAF6

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for TAF6

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for TAF6

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1160181	chr17_7017644_-	ENSG00000106290.13	ENST00000421980	hsa-miR-195-3p	100109985	100109992	8mer-1a	100109985	100110005	150	-12.09
CAediting_524911	chr7_5495852_-	ENSG00000106290.13	ENST00000421980	hsa-miR-589-3p	100108409	100108415	7mer-m8	100108408	100108428	149	-23.16
CAediting_1054808	chr15_66496985_-	ENSG00000106290.13	ENST00000421980	hsa-miR-4512	100108091	100108098	8mer-1a	100108091	100108112	140	-14.63
CAediting_86358	chr1_109598906_+	ENSG00000106290.13	ENST00000421980	hsa-miR-197-5p	100107930	100107937	8mer-1a	100107930	100107952	164	-35.38
CAediting_1054808	chr15_66496985_-	ENSG00000106290.13	ENST00000421980	hsa-miR-4512	100107416	100107423	8mer-1a	100107416	100107436	151	-27.46
CAediting_1368054	chr19_46709310_-	ENSG00000106290.13	ENST00000421980	hsa-miR-320e	100107308	100107314	7mer-m8	100107307	100107324	147	-16.5
CAediting_1524209	chrX_134546392_-	ENSG00000106290.13	ENST00000421980	hsa-miR-503-5p	100111949	100111955	7mer-1a	100111949	100111974	143	-27.12
CAediting_468389	chr6_31355314_-	ENSG00000106290.13	ENST00000421980	hsa-miR-6891-5p	100107979	100107985	7mer-m8	100107978	100107996	158	-25.01

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_524911	chr7_5495852_-	ENSG00000106290.13	ENST00000421980	hsa-miR-589-3p	100108520	100108526	7mer-m8	100108519	100108540	148	-17.59

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for TAF6

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000472509.4	protein_coding
ENST00000417349.4	protein_coding
ENST00000431404.2	protein_coding
ENST00000451699.4	protein_coding
ENST00000460673.2	protein_coding
ENST00000497233.1	processed_transcript
ENST00000523306.4	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_579754	ENST00000472509.4	chr7_100114427_-	-974.50	-974.10	-987.20
CAediting_579755	ENST00000472509.4	chr7_100114460_-	-975.50	-974.10	-987.20
CAediting_579756	ENST00000472509.4	chr7_100114475_-	-976.90	-974.10	-987.20
CAediting_579757	ENST00000472509.4	chr7_100114476_-	-978.80	-974.10	-987.20
CAediting_579758	ENST00000472509.4	chr7_100114477_-	-977.10	-974.10	-987.20
CAediting_579759	ENST00000472509.4	chr7_100114503_-	-974.10	-974.10	-987.20
CAediting_579760	ENST00000472509.4	chr7_100114528_-	-973.40	-974.10	-987.20
CAediting_579761	ENST00000472509.4	chr7_100114552_-	-975.20	-974.10	-987.20
CAediting_579927	ENST00000417349.4	chr7_100118525_-	-225.10	-225.50	-241.80
CAediting_579928	ENST00000417349.4	chr7_100118533_-	-225.90	-225.50	-241.80
CAediting_579929	ENST00000417349.4	chr7_100118535_-	-226.80	-225.50	-241.80
CAediting_579930	ENST00000417349.4	chr7_100118545_-	-227.30	-225.50	-241.80
CAediting_579931	ENST00000417349.4	chr7_100118548_-	-225.50	-225.50	-241.80
CAediting_579932	ENST00000417349.4	chr7_100118575_-	-225.20	-225.50	-241.80
CAediting_579933	ENST00000417349.4	chr7_100118580_-	-226.00	-225.50	-241.80
CAediting_579934	ENST00000417349.4	chr7_100118587_-	-228.10	-225.50	-241.80
CAediting_579935	ENST00000417349.4	chr7_100118588_-	-228.10	-225.50	-241.80
CAediting_579936	ENST00000417349.4	chr7_100118595_-	-225.00	-225.50	-241.80
CAediting_579937	ENST00000417349.4	chr7_100118610_-	-225.40	-225.50	-241.80
CAediting_579938	ENST00000417349.4	chr7_100118613_-	-230.20	-225.50	-241.80
CAediting_579939	ENST00000417349.4	chr7_100118619_-	-224.80	-225.50	-241.80
CAediting_579940	ENST00000417349.4	chr7_100118631_-	-224.80	-225.50	-241.80
CAediting_579941	ENST00000417349.4	chr7_100118635_-	-225.50	-225.50	-241.80
CAediting_579859	ENST00000431404.2	chr7_100116517_-	-134.30	-134.00	-135.00
CAediting_579860	ENST00000431404.2	chr7_100116552_-	-134.70	-134.00	-135.00
CAediting_579927	ENST00000451699.4	chr7_100118525_-	-307.50	-307.90	-317.50
CAediting_579928	ENST00000451699.4	chr7_100118533_-	-307.50	-307.90	-317.50
CAediting_579929	ENST00000451699.4	chr7_100118535_-	-308.70	-307.90	-317.50
CAediting_579930	ENST00000451699.4	chr7_100118545_-	-307.20	-307.90	-317.50
CAediting_579931	ENST00000451699.4	chr7_100118548_-	-307.90	-307.90	-317.50
CAediting_579932	ENST00000451699.4	chr7_100118575_-	-307.60	-307.90	-317.50
CAediting_579933	ENST00000451699.4	chr7_100118580_-	-307.00	-307.90	-317.50
CAediting_579934	ENST00000451699.4	chr7_100118587_-	-308.80	-307.90	-317.50
CAediting_579935	ENST00000451699.4	chr7_100118588_-	-309.40	-307.90	-317.50
CAediting_579936	ENST00000451699.4	chr7_100118595_-	-307.10	-307.90	-317.50
CAediting_579937	ENST00000451699.4	chr7_100118610_-	-307.50	-307.90	-317.50
CAediting_579938	ENST00000451699.4	chr7_100118613_-	-313.30	-307.90	-317.50
CAediting_579939	ENST00000451699.4	chr7_100118619_-	-307.20	-307.90	-317.50
CAediting_579940	ENST00000451699.4	chr7_100118631_-	-307.20	-307.90	-317.50
CAediting_579941	ENST00000451699.4	chr7_100118635_-	-308.00	-307.90	-317.50
CAediting_579859	ENST00000460673.2	chr7_100116517_-	-205.00	-204.70	-223.70
CAediting_579860	ENST00000460673.2	chr7_100116552_-	-204.70	-204.70	-223.70
CAediting_579927	ENST00000460673.2	chr7_100118525_-	-206.50	-204.70	-223.70
CAediting_579928	ENST00000460673.2	chr7_100118533_-	-206.20	-204.70	-223.70
CAediting_579929	ENST00000460673.2	chr7_100118535_-	-208.20	-204.70	-223.70
CAediting_579930	ENST00000460673.2	chr7_100118545_-	-209.00	-204.70	-223.70
CAediting_579931	ENST00000460673.2	chr7_100118548_-	-206.50	-204.70	-223.70
CAediting_579932	ENST00000460673.2	chr7_100118575_-	-207.60	-204.70	-223.70
CAediting_579933	ENST00000460673.2	chr7_100118580_-	-208.70	-204.70	-223.70
CAediting_579934	ENST00000460673.2	chr7_100118587_-	-208.40	-204.70	-223.70
CAediting_579935	ENST00000460673.2	chr7_100118588_-	-204.80	-204.70	-223.70
CAediting_579936	ENST00000460673.2	chr7_100118595_-	-204.00	-204.70	-223.70
CAediting_579937	ENST00000460673.2	chr7_100118610_-	-204.70	-204.70	-223.70
CAediting_579938	ENST00000460673.2	chr7_100118613_-	-209.10	-204.70	-223.70
CAediting_579939	ENST00000460673.2	chr7_100118619_-	-203.80	-204.70	-223.70
CAediting_579940	ENST00000460673.2	chr7_100118631_-	-206.00	-204.70	-223.70
CAediting_579941	ENST00000460673.2	chr7_100118635_-	-205.80	-204.70	-223.70
CAediting_579924	ENST00000497233.1	chr7_100118439_-	-186.90	-186.00	-208.60
CAediting_579925	ENST00000497233.1	chr7_100118489_-	-189.30	-186.00	-208.60
CAediting_579926	ENST00000497233.1	chr7_100118492_-	-185.30	-186.00	-208.60
CAediting_579927	ENST00000497233.1	chr7_100118525_-	-186.00	-186.00	-208.60
CAediting_579928	ENST00000497233.1	chr7_100118533_-	-188.80	-186.00	-208.60
CAediting_579929	ENST00000497233.1	chr7_100118535_-	-190.10	-186.00	-208.60
CAediting_579930	ENST00000497233.1	chr7_100118545_-	-190.30	-186.00	-208.60
CAediting_579931	ENST00000497233.1	chr7_100118548_-	-187.90	-186.00	-208.60
CAediting_579932	ENST00000497233.1	chr7_100118575_-	-186.00	-186.00	-208.60
CAediting_579933	ENST00000497233.1	chr7_100118580_-	-185.50	-186.00	-208.60
CAediting_579934	ENST00000497233.1	chr7_100118587_-	-187.90	-186.00	-208.60
CAediting_579935	ENST00000497233.1	chr7_100118588_-	-187.10	-186.00	-208.60
CAediting_579936	ENST00000497233.1	chr7_100118595_-	-187.10	-186.00	-208.60
CAediting_579937	ENST00000497233.1	chr7_100118610_-	-185.60	-186.00	-208.60
CAediting_579938	ENST00000497233.1	chr7_100118613_-	-191.40	-186.00	-208.60
CAediting_579939	ENST00000497233.1	chr7_100118619_-	-185.30	-186.00	-208.60
CAediting_579940	ENST00000497233.1	chr7_100118631_-	-185.30	-186.00	-208.60
CAediting_579941	ENST00000497233.1	chr7_100118635_-	-186.10	-186.00	-208.60
CAediting_579927	ENST00000523306.4	chr7_100118525_-	-320.30	-320.70	-328.50
CAediting_579928	ENST00000523306.4	chr7_100118533_-	-320.00	-320.70	-328.50
CAediting_579929	ENST00000523306.4	chr7_100118535_-	-322.00	-320.70	-328.50
CAediting_579930	ENST00000523306.4	chr7_100118545_-	-320.30	-320.70	-328.50
CAediting_579931	ENST00000523306.4	chr7_100118548_-	-320.70	-320.70	-328.50
CAediting_579932	ENST00000523306.4	chr7_100118575_-	-321.10	-320.70	-328.50
CAediting_579933	ENST00000523306.4	chr7_100118580_-	-320.00	-320.70	-328.50
CAediting_579934	ENST00000523306.4	chr7_100118587_-	-321.60	-320.70	-328.50
CAediting_579935	ENST00000523306.4	chr7_100118588_-	-322.20	-320.70	-328.50
CAediting_579936	ENST00000523306.4	chr7_100118595_-	-319.90	-320.70	-328.50
CAediting_579937	ENST00000523306.4	chr7_100118610_-	-321.40	-320.70	-328.50
CAediting_579938	ENST00000523306.4	chr7_100118613_-	-321.30	-320.70	-328.50
CAediting_579939	ENST00000523306.4	chr7_100118619_-	-320.30	-320.70	-328.50
CAediting_579940	ENST00000523306.4	chr7_100118631_-	-320.70	-320.70	-328.50
CAediting_579941	ENST00000523306.4	chr7_100118635_-	-320.80	-320.70	-328.50

Top

Relation with ADAR for TAF6

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_579938	chr7_100118613_-	.	.	0.0204825768380848	0.1594606749181	.	.
ESCA	CAediting_579938	chr7_100118613_-	0.0355547323957328	0.196244566946789	.	.	.	.
TGCT	CAediting_579938	chr7_100118613_-	0.00105579452246498	0.341500691695867	.	.	.	.
ESCA	CAediting_579941	chr7_100118635_-	.	.	.	.	0.00119755330952915	0.39604321930613

Top

Relation with cancer stages for TAF6

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
CESC	clinical_stage	CAediting_579938	chr7_100118613_-	0.0367627883416408	-0.290393386579335
LUAD	pathologic_stage	CAediting_579932	chr7_100118575_-	0.0139856218657023	-0.222005030424955

Top

Relation with survival for TAF6

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
KIRP	CAediting_579932	chr7_100118575_-	0.00118446968938068	0.0016595	28742.9

Top

RelatedDrugs for TAF6

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for TAF6

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
TAF6	C4310702	ALAZAMI-YUAN SYNDROME	2	CTD_human;GENOMICS_ENGLAND;UNIPROT
TAF6	C3714756	Intellectual Disability	1	GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene