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Editing gene: TAF1 (CAeditome ID:6872)

Gene summary for TAF1

Gene summary

Gene information	Gene symbol	TAF1
	Gene ID	6872
	Gene name	TATA-box binding protein associated factor 1
	Synonyms	BA2R\|CCG1\|CCGS\|DYT3\|DYT3/TAF1\|KAT4\|MRXS33\|N-TAF1\|NSCL2\|OF\|P250\|TAF(II)250\|TAF2A\|TAFII-250\|TAFII250\|XDP
	Cytomap	Xq13.1
	Type of gene	protein-coding
	Description	transcription initiation factor TFIID subunit 1TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDaTBP-associated factor 250 kDacell cycle gene 1 proteincell cycle, G1 phase defectcomplementation of cell cycle block, G1-to
	Modification date	20210518
	UniProtAcc	P21675
	Context	- 18684994(A functional genome-wide RNAi screen identifies TAF1 as a regulator for apoptosis in response to genotoxic stress)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
TAF1	GO:1905502	Transcription initiation factor TFIID subunit 1	24927529
TAF1	GO:0005654	Transcription initiation factor TFIID subunit 1	12498690
TAF1	GO:0005730	Transcription initiation factor TFIID subunit 1	12498690
TAF1	GO:0001181	Transcription initiation factor TFIID subunit 1	12498690
TAF1	GO:0004402	Transcription initiation factor TFIID subunit 1	8980232
TAF1	GO:0004672	Transcription initiation factor TFIID subunit 1	24289924
TAF1	GO:0004674	Transcription initiation factor TFIID subunit 1	15053879
TAF1	GO:0004674	Transcription initiation factor TFIID subunit 1	8625415
TAF1	GO:0016251	Transcription initiation factor TFIID subunit 1	17996705
TAF1	GO:0016301	Transcription initiation factor TFIID subunit 1	18548200
TAF1	GO:0061631	Transcription initiation factor TFIID subunit 1	20181722
TAF1	GO:0070577	Transcription initiation factor TFIID subunit 1	17996705
TAF1	GO:0140416	Transcription initiation factor TFIID subunit 1	24289924
TAF1	GO:0000209	Transcription initiation factor TFIID subunit 1	20181722
TAF1	GO:0006367	Transcription initiation factor TFIID subunit 1	17996705
TAF1	GO:0006468	Transcription initiation factor TFIID subunit 1	18548200
TAF1	GO:0006511	Transcription initiation factor TFIID subunit 1	20181722
TAF1	GO:0006974	Transcription initiation factor TFIID subunit 1	24289924
TAF1	GO:0018105	Transcription initiation factor TFIID subunit 1	8625415
TAF1	GO:0018107	Transcription initiation factor TFIID subunit 1	15053879
TAF1	GO:0018107	Transcription initiation factor TFIID subunit 1	24289924
TAF1	GO:0032092	Transcription initiation factor TFIID subunit 1	17237821
TAF1	GO:0032436	Transcription initiation factor TFIID subunit 1	15053879
TAF1	GO:0034644	Transcription initiation factor TFIID subunit 1	24289924
TAF1	GO:0036369	Transcription initiation factor TFIID subunit 1	20181722
TAF1	GO:0043433	Transcription initiation factor TFIID subunit 1	24289924
TAF1	GO:0046777	Transcription initiation factor TFIID subunit 1	20181722
TAF1	GO:0046777	Transcription initiation factor TFIID subunit 1	24289924
TAF1	GO:0046777	Transcription initiation factor TFIID subunit 1	8625415
TAF1	GO:0050821	Transcription initiation factor TFIID subunit 1	17237821
TAF1	GO:0071318	Transcription initiation factor TFIID subunit 1	24289924
TAF1	GO:1903026	Transcription initiation factor TFIID subunit 1	24289924
TAF1	GO:1905524	Transcription initiation factor TFIID subunit 1	17237821
TAF1	GO:2000825	Transcription initiation factor TFIID subunit 1	20181722
TAF1	GO:0000785	Transcription initiation factor TFIID subunit 1	20181722
TAF1	GO:0000785	Transcription initiation factor TFIID subunit 1	24289924
TAF1	GO:0005634	Transcription initiation factor TFIID subunit 1	12498690
TAF1	GO:0005654	Transcription initiation factor TFIID subunit 1	0000052
TAF1	GO:0005669	Transcription initiation factor TFIID subunit 1	14580349
TAF1	GO:0005669	Transcription initiation factor TFIID subunit 1	24927529
TAF1	GO:0005669	Transcription initiation factor TFIID subunit 1	25412659
TAF1	GO:0005669	Transcription initiation factor TFIID subunit 1	27007846
TAF1	GO:0005669	Transcription initiation factor TFIID subunit 1	29111974
TAF1	GO:0005669	Transcription initiation factor TFIID subunit 1	8625415
TAF1	GO:0071339	Transcription initiation factor TFIID subunit 1	15960975

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RNA A-to-I events for TAF1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000147133.14

RNA A-to-I editing events in Cancer.

CAediting_1510981(71372311, +), CAediting_1510982(71375733, +), CAediting_1510983(71381528, +), CAediting_1510984(71390004, +), CAediting_1510985(71390620, +), CAediting_1510986(71390646, +), CAediting_1510987(71390875, +), CAediting_1510988(71391060, +), CAediting_1510989(71391068, +), CAediting_1510990(71396799, +), CAediting_1510991(71396830, +), CAediting_1510992(71396842, +), CAediting_1510993(71396896, +), CAediting_1510994(71396904, +), CAediting_1510995(71396910, +), CAediting_1510996(71396921, +), CAediting_1510997(71398179, +), CAediting_1510998(71405506, +), CAediting_1510999(71405531, +), CAediting_1511000(71405613, +), CAediting_1511001(71405751, +), CAediting_1511002(71406067, +), CAediting_1511003(71406095, +), CAediting_1511004(71406096, +), CAediting_1511005(71406109, +), CAediting_1511006(71406119, +), CAediting_1511007(71406143, +), CAediting_1511008(71406164, +), CAediting_1511009(71406167, +), CAediting_1511010(71406168, +), CAediting_1511011(71406171, +), CAediting_1511012(71406173, +), CAediting_1511013(71406178, +), CAediting_1511014(71406182, +), CAediting_1511015(71406208, +), CAediting_1511016(71406209, +), CAediting_1511017(71406214, +), CAediting_1511018(71408381, +), CAediting_1511019(71408416, +), CAediting_1511020(71408417, +), CAediting_1511021(71408421, +), CAediting_1511022(71408434, +), CAediting_1511023(71408446, +), CAediting_1511024(71408458, +), CAediting_1511025(71408482, +), CAediting_1511026(71408491, +), CAediting_1511027(71408497, +), CAediting_1511028(71408500, +), CAediting_1511029(71408514, +), CAediting_1511030(71408517, +), CAediting_1511031(71408539, +), CAediting_1511032(71408546, +), CAediting_1511033(71408567, +), CAediting_1511034(71408734, +), CAediting_1511035(71408771, +), CAediting_1511036(71408776, +), CAediting_1511037(71408792, +), CAediting_1511038(71408793, +), CAediting_1511039(71408797, +), CAediting_1511040(71408808, +), CAediting_1511041(71408836, +), CAediting_1511042(71408851, +), CAediting_1511043(71408852, +), CAediting_1511044(71408853, +), CAediting_1511045(71408857, +), CAediting_1511046(71408860, +), CAediting_1511047(71408867, +), CAediting_1511048(71408877, +), CAediting_1511049(71408920, +), CAediting_1511050(71409255, +), CAediting_1511051(71409265, +), CAediting_1511052(71409267, +), CAediting_1511053(71409311, +), CAediting_1511054(71409337, +), CAediting_1511055(71409376, +), CAediting_1511056(71409389, +), CAediting_1511057(71409390, +), CAediting_1511058(71409391, +), CAediting_1511059(71409397, +), CAediting_1511060(71409403, +), CAediting_1511061(71409409, +), CAediting_1511062(71409912, +), CAediting_1511063(71409919, +), CAediting_1511064(71409973, +), CAediting_1511065(71410010, +), CAediting_1511066(71410022, +), CAediting_1511067(71410034, +), CAediting_1511068(71410093, +), CAediting_1511069(71410152, +), CAediting_1511070(71410159, +), CAediting_1511071(71410165, +), CAediting_1511072(71410175, +), CAediting_1511073(71410834, +), CAediting_1511074(71410948, +), CAediting_1511075(71411045, +), CAediting_1511076(71411097, +), CAediting_1511077(71411098, +), CAediting_1511078(71411140, +), CAediting_1511079(71411153, +), CAediting_1511080(71411181, +), CAediting_1511081(71411182, +), CAediting_1511082(71411186, +), CAediting_1511083(71411394, +), CAediting_1511084(71411399, +), CAediting_1511085(71411407, +), CAediting_1511086(71411413, +), CAediting_1511087(71411420, +), CAediting_1511088(71411424, +), CAediting_1511089(71411425, +), CAediting_1511090(71411428, +), CAediting_1511091(71411429, +), CAediting_1511092(71411436, +), CAediting_1511093(71411459, +), CAediting_1511094(71411461, +), CAediting_1511095(71411467, +), CAediting_1511096(71412173, +), CAediting_1511097(71412186, +), CAediting_1511098(71412188, +), CAediting_1511099(71412194, +), CAediting_1511100(71412717, +), CAediting_1511101(71416255, +), CAediting_1511102(71416259, +), CAediting_1511103(71416265, +), CAediting_1511104(71416275, +), CAediting_1511105(71416282, +), CAediting_1511106(71416306, +), CAediting_1511107(71416331, +), CAediting_1511108(71416335, +), CAediting_1511109(71416341, +), CAediting_1511110(71416343, +), CAediting_1511111(71416356, +), CAediting_1511112(71416931, +), CAediting_1511113(71416944, +), CAediting_1511114(71416949, +), CAediting_1511115(71416955, +), CAediting_1511116(71416967, +), CAediting_1511117(71417376, +), CAediting_1511118(71417382, +), CAediting_1511119(71417420, +), CAediting_1511120(71417586, +), CAediting_1511121(71417599, +), CAediting_1511122(71417603, +), CAediting_1511123(71417616, +), CAediting_1511124(71417619, +), CAediting_1511125(71417625, +), CAediting_1511126(71417626, +), CAediting_1511127(71417638, +), CAediting_1511128(71418115, +), CAediting_1511129(71418211, +), CAediting_1511130(71418223, +), CAediting_1511131(71418294, +), CAediting_1511132(71418325, +), CAediting_1511133(71418332, +), CAediting_1511134(71418335, +), CAediting_1511135(71418371, +), CAediting_1511136(71418947, +), CAediting_1511137(71419028, +), CAediting_1511138(71419035, +), CAediting_1511139(71419041, +), CAediting_1511140(71424510, +), CAediting_1511141(71425358, +), CAediting_1511142(71425383, +), CAediting_1511143(71425385, +), CAediting_1511144(71425497, +), CAediting_1511145(71426172, +), CAediting_1511146(71426222, +), CAediting_1511147(71426223, +), CAediting_1511148(71426250, +), CAediting_1511149(71426256, +), CAediting_1511150(71427738, +), CAediting_1511151(71427779, +), CAediting_1511152(71427783, +), CAediting_1511153(71427792, +), CAediting_1511154(71427818, +), CAediting_1511155(71427819, +), CAediting_1511156(71427828, +), CAediting_1511157(71427832, +), CAediting_1511158(71430204, +), CAediting_1511159(71430215, +), CAediting_1511160(71430218, +), CAediting_1511161(71430220, +), CAediting_1511162(71430222, +), CAediting_1511163(71430260, +), CAediting_1511164(71430270, +), CAediting_1511165(71431243, +), CAediting_1511166(71431705, +), CAediting_1511167(71431729, +), CAediting_1511168(71431733, +), CAediting_1511169(71431753, +), CAediting_1511170(71431755, +), CAediting_1511171(71431757, +), CAediting_1511172(71431759, +), CAediting_1511173(71431769, +), CAediting_1511174(71431785, +), CAediting_1511175(71431789, +), CAediting_1511176(71431795, +), CAediting_1511177(71431805, +), CAediting_1511178(71431818, +), CAediting_1511179(71431822, +), CAediting_1511180(71431831, +), CAediting_1511181(71431861, +), CAediting_1511182(71431866, +), CAediting_1511183(71437507, +), CAediting_1511184(71437619, +), CAediting_1511185(71438019, +), CAediting_1511186(71438089, +), CAediting_1511187(71438886, +), CAediting_1511188(71441000, +), CAediting_1511189(71441001, +), CAediting_1511190(71441066, +), CAediting_1511191(71441082, +), CAediting_1511192(71441123, +), CAediting_1511193(71441136, +), CAediting_1511194(71443737, +), CAediting_1511195(71443963, +), CAediting_1511196(71443985, +), CAediting_1511197(71444441, +), CAediting_1511198(71444469, +), CAediting_1511199(71444485, +), CAediting_1511200(71444494, +), CAediting_1511201(71444863, +), CAediting_1511202(71444873, +), CAediting_1511203(71444875, +), CAediting_1511204(71445135, +), CAediting_1511205(71445143, +), CAediting_1511206(71445179, +), CAediting_1511207(71445180, +), CAediting_1511208(71445189, +), CAediting_1511209(71445193, +), CAediting_1511210(71445220, +), CAediting_1511211(71445221, +), CAediting_1511212(71445975, +), CAediting_1511213(71445991, +), CAediting_1511214(71450438, +), CAediting_1511215(71462375, +), CAediting_1511216(71464443, +), CAediting_1511217(71464449, +), CAediting_1511218(71464498, +), CAediting_1511219(71464509, +), CAediting_1511220(71464519, +), CAediting_1511221(71464540, +), CAediting_1511222(71464549, +), CAediting_1511223(71464553, +), CAediting_1511224(71464555, +), CAediting_1511225(71464558, +), CAediting_1511226(71464602, +), CAediting_1511227(71464612, +), CAediting_1511228(71464626, +), CAediting_1511229(71464638, +), CAediting_1511230(71464651, +), CAediting_1511231(71464661, +), CAediting_1511232(71464666, +), CAediting_1511233(71464687, +), CAediting_1511234(71465008, +), CAediting_1511235(71465009, +), CAediting_1511236(71465017, +), CAediting_1511237(71465022, +), CAediting_1511238(71465054, +), CAediting_1511239(71465073, +), CAediting_1511240(71465202, +), CAediting_1511241(71466311, +), CAediting_1511242(71466327, +), CAediting_1511243(71466346, +), CAediting_1511244(71466347, +), CAediting_1511245(71466364, +), CAediting_1511246(71466376, +), CAediting_1511247(71466377, +), CAediting_1511248(71466392, +), CAediting_1511249(71466404, +), CAediting_1511250(71466478, +), CAediting_1511251(71466495, +), CAediting_1511252(71466539, +), CAediting_1511253(71466543, +), CAediting_1511254(71466544, +), CAediting_1511255(71466558, +), CAediting_1511256(71466561, +), CAediting_1511257(71466578, +), CAediting_1511258(71466598, +), CAediting_1511259(71466607, +), CAediting_1511260(71466652, +), CAediting_1511261(71466654, +), CAediting_1511262(71466674, +), CAediting_1511263(71466703, +), CAediting_1511264(71466713, +), CAediting_1511265(71466728, +), CAediting_1511266(71466729, +), CAediting_1511267(71466741, +), CAediting_1511268(71466755, +), CAediting_1511269(71466768, +), CAediting_1511270(71469511, +), CAediting_1511271(71508562, +),

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RNA editing positional annotations for TAF1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1510981	chrX_71372311_+	intronic
CAediting_1510982	chrX_71375733_+	intronic
CAediting_1510983	chrX_71381528_+	intronic
CAediting_1510984	chrX_71390004_+	intronic
CAediting_1510985	chrX_71390620_+	intronic
CAediting_1510986	chrX_71390646_+	intronic
CAediting_1510987	chrX_71390875_+	intronic
CAediting_1510988	chrX_71391060_+	intronic
CAediting_1510989	chrX_71391068_+	intronic
CAediting_1510990	chrX_71396799_+	intronic
CAediting_1510991	chrX_71396830_+	intronic
CAediting_1510992	chrX_71396842_+	intronic
CAediting_1510993	chrX_71396896_+	intronic
CAediting_1510994	chrX_71396904_+	intronic
CAediting_1510995	chrX_71396910_+	intronic
CAediting_1510996	chrX_71396921_+	intronic
CAediting_1510997	chrX_71398179_+	intronic
CAediting_1510998	chrX_71405506_+	intronic
CAediting_1510999	chrX_71405531_+	intronic
CAediting_1511000	chrX_71405613_+	intronic
CAediting_1511001	chrX_71405751_+	intronic
CAediting_1511002	chrX_71406067_+	intronic
CAediting_1511003	chrX_71406095_+	intronic
CAediting_1511004	chrX_71406096_+	intronic
CAediting_1511005	chrX_71406109_+	intronic
CAediting_1511006	chrX_71406119_+	intronic
CAediting_1511007	chrX_71406143_+	intronic
CAediting_1511008	chrX_71406164_+	intronic
CAediting_1511009	chrX_71406167_+	intronic
CAediting_1511010	chrX_71406168_+	intronic
CAediting_1511011	chrX_71406171_+	intronic
CAediting_1511012	chrX_71406173_+	intronic
CAediting_1511013	chrX_71406178_+	intronic
CAediting_1511014	chrX_71406182_+	intronic
CAediting_1511015	chrX_71406208_+	intronic
CAediting_1511016	chrX_71406209_+	intronic
CAediting_1511017	chrX_71406214_+	intronic
CAediting_1511018	chrX_71408381_+	intronic
CAediting_1511019	chrX_71408416_+	intronic
CAediting_1511020	chrX_71408417_+	intronic
CAediting_1511021	chrX_71408421_+	intronic
CAediting_1511022	chrX_71408434_+	intronic
CAediting_1511023	chrX_71408446_+	intronic
CAediting_1511024	chrX_71408458_+	intronic
CAediting_1511025	chrX_71408482_+	intronic
CAediting_1511026	chrX_71408491_+	intronic
CAediting_1511027	chrX_71408497_+	intronic
CAediting_1511028	chrX_71408500_+	intronic
CAediting_1511029	chrX_71408514_+	intronic
CAediting_1511030	chrX_71408517_+	intronic
CAediting_1511031	chrX_71408539_+	intronic
CAediting_1511032	chrX_71408546_+	intronic
CAediting_1511033	chrX_71408567_+	intronic
CAediting_1511034	chrX_71408734_+	intronic
CAediting_1511035	chrX_71408771_+	intronic
CAediting_1511036	chrX_71408776_+	intronic
CAediting_1511037	chrX_71408792_+	intronic
CAediting_1511038	chrX_71408793_+	intronic
CAediting_1511039	chrX_71408797_+	intronic
CAediting_1511040	chrX_71408808_+	intronic
CAediting_1511041	chrX_71408836_+	intronic
CAediting_1511042	chrX_71408851_+	intronic
CAediting_1511043	chrX_71408852_+	intronic
CAediting_1511044	chrX_71408853_+	intronic
CAediting_1511045	chrX_71408857_+	intronic
CAediting_1511046	chrX_71408860_+	intronic
CAediting_1511047	chrX_71408867_+	intronic
CAediting_1511048	chrX_71408877_+	intronic
CAediting_1511049	chrX_71408920_+	intronic
CAediting_1511050	chrX_71409255_+	intronic
CAediting_1511051	chrX_71409265_+	intronic
CAediting_1511052	chrX_71409267_+	intronic
CAediting_1511053	chrX_71409311_+	intronic
CAediting_1511054	chrX_71409337_+	intronic
CAediting_1511055	chrX_71409376_+	intronic
CAediting_1511056	chrX_71409389_+	intronic
CAediting_1511057	chrX_71409390_+	intronic
CAediting_1511058	chrX_71409391_+	intronic
CAediting_1511059	chrX_71409397_+	intronic
CAediting_1511060	chrX_71409403_+	intronic
CAediting_1511061	chrX_71409409_+	intronic
CAediting_1511062	chrX_71409912_+	intronic
CAediting_1511063	chrX_71409919_+	intronic
CAediting_1511064	chrX_71409973_+	intronic
CAediting_1511065	chrX_71410010_+	intronic
CAediting_1511066	chrX_71410022_+	intronic
CAediting_1511067	chrX_71410034_+	intronic
CAediting_1511068	chrX_71410093_+	intronic
CAediting_1511069	chrX_71410152_+	intronic
CAediting_1511070	chrX_71410159_+	intronic
CAediting_1511071	chrX_71410165_+	intronic
CAediting_1511072	chrX_71410175_+	intronic
CAediting_1511073	chrX_71410834_+	intronic
CAediting_1511074	chrX_71410948_+	intronic
CAediting_1511075	chrX_71411045_+	intronic
CAediting_1511076	chrX_71411097_+	intronic
CAediting_1511077	chrX_71411098_+	intronic
CAediting_1511078	chrX_71411140_+	intronic
CAediting_1511079	chrX_71411153_+	intronic
CAediting_1511080	chrX_71411181_+	intronic
CAediting_1511081	chrX_71411182_+	intronic
CAediting_1511082	chrX_71411186_+	intronic
CAediting_1511083	chrX_71411394_+	intronic
CAediting_1511084	chrX_71411399_+	intronic
CAediting_1511085	chrX_71411407_+	intronic
CAediting_1511086	chrX_71411413_+	intronic
CAediting_1511087	chrX_71411420_+	intronic
CAediting_1511088	chrX_71411424_+	intronic
CAediting_1511089	chrX_71411425_+	intronic
CAediting_1511090	chrX_71411428_+	intronic
CAediting_1511091	chrX_71411429_+	intronic
CAediting_1511092	chrX_71411436_+	intronic
CAediting_1511093	chrX_71411459_+	intronic
CAediting_1511094	chrX_71411461_+	intronic
CAediting_1511095	chrX_71411467_+	intronic
CAediting_1511096	chrX_71412173_+	intronic
CAediting_1511097	chrX_71412186_+	intronic
CAediting_1511098	chrX_71412188_+	intronic
CAediting_1511099	chrX_71412194_+	intronic
CAediting_1511100	chrX_71412717_+	intronic
CAediting_1511101	chrX_71416255_+	intronic
CAediting_1511102	chrX_71416259_+	intronic
CAediting_1511103	chrX_71416265_+	intronic
CAediting_1511104	chrX_71416275_+	intronic
CAediting_1511105	chrX_71416282_+	intronic
CAediting_1511106	chrX_71416306_+	intronic
CAediting_1511107	chrX_71416331_+	intronic
CAediting_1511108	chrX_71416335_+	intronic
CAediting_1511109	chrX_71416341_+	intronic
CAediting_1511110	chrX_71416343_+	intronic
CAediting_1511111	chrX_71416356_+	intronic
CAediting_1511112	chrX_71416931_+	intronic
CAediting_1511113	chrX_71416944_+	intronic
CAediting_1511114	chrX_71416949_+	intronic
CAediting_1511115	chrX_71416955_+	intronic
CAediting_1511116	chrX_71416967_+	intronic
CAediting_1511117	chrX_71417376_+	intronic
CAediting_1511118	chrX_71417382_+	intronic
CAediting_1511119	chrX_71417420_+	intronic
CAediting_1511120	chrX_71417586_+	intronic
CAediting_1511121	chrX_71417599_+	intronic
CAediting_1511122	chrX_71417603_+	intronic
CAediting_1511123	chrX_71417616_+	intronic
CAediting_1511124	chrX_71417619_+	intronic
CAediting_1511125	chrX_71417625_+	intronic
CAediting_1511126	chrX_71417626_+	intronic
CAediting_1511127	chrX_71417638_+	intronic
CAediting_1511128	chrX_71418115_+	intronic
CAediting_1511129	chrX_71418211_+	intronic
CAediting_1511130	chrX_71418223_+	intronic
CAediting_1511131	chrX_71418294_+	intronic
CAediting_1511132	chrX_71418325_+	intronic
CAediting_1511133	chrX_71418332_+	intronic
CAediting_1511134	chrX_71418335_+	intronic
CAediting_1511135	chrX_71418371_+	intronic
CAediting_1511136	chrX_71418947_+	intronic
CAediting_1511137	chrX_71419028_+	intronic
CAediting_1511138	chrX_71419035_+	intronic
CAediting_1511139	chrX_71419041_+	intronic
CAediting_1511140	chrX_71424510_+	ncRNA_intronic
CAediting_1511141	chrX_71425358_+	ncRNA_intronic
CAediting_1511142	chrX_71425383_+	ncRNA_intronic
CAediting_1511143	chrX_71425385_+	ncRNA_intronic
CAediting_1511144	chrX_71425497_+	ncRNA_intronic
CAediting_1511145	chrX_71426172_+	ncRNA_intronic
CAediting_1511146	chrX_71426222_+	ncRNA_intronic
CAediting_1511147	chrX_71426223_+	ncRNA_intronic
CAediting_1511148	chrX_71426250_+	ncRNA_intronic
CAediting_1511149	chrX_71426256_+	ncRNA_intronic
CAediting_1511150	chrX_71427738_+	ncRNA_intronic
CAediting_1511151	chrX_71427779_+	ncRNA_intronic
CAediting_1511152	chrX_71427783_+	ncRNA_intronic
CAediting_1511153	chrX_71427792_+	ncRNA_intronic
CAediting_1511154	chrX_71427818_+	ncRNA_intronic
CAediting_1511155	chrX_71427819_+	ncRNA_intronic
CAediting_1511156	chrX_71427828_+	ncRNA_intronic
CAediting_1511157	chrX_71427832_+	ncRNA_intronic
CAediting_1511158	chrX_71430204_+	ncRNA_intronic
CAediting_1511159	chrX_71430215_+	ncRNA_intronic
CAediting_1511160	chrX_71430218_+	ncRNA_intronic
CAediting_1511161	chrX_71430220_+	ncRNA_intronic
CAediting_1511162	chrX_71430222_+	ncRNA_intronic
CAediting_1511163	chrX_71430260_+	ncRNA_intronic
CAediting_1511164	chrX_71430270_+	ncRNA_intronic
CAediting_1511165	chrX_71431243_+	ncRNA_intronic
CAediting_1511166	chrX_71431705_+	ncRNA_intronic
CAediting_1511167	chrX_71431729_+	ncRNA_intronic
CAediting_1511168	chrX_71431733_+	ncRNA_intronic
CAediting_1511169	chrX_71431753_+	ncRNA_intronic
CAediting_1511170	chrX_71431755_+	ncRNA_intronic
CAediting_1511171	chrX_71431757_+	ncRNA_intronic
CAediting_1511172	chrX_71431759_+	ncRNA_intronic
CAediting_1511173	chrX_71431769_+	ncRNA_intronic
CAediting_1511174	chrX_71431785_+	ncRNA_intronic
CAediting_1511175	chrX_71431789_+	ncRNA_intronic
CAediting_1511176	chrX_71431795_+	ncRNA_intronic
CAediting_1511177	chrX_71431805_+	ncRNA_intronic
CAediting_1511178	chrX_71431818_+	ncRNA_intronic
CAediting_1511179	chrX_71431822_+	ncRNA_intronic
CAediting_1511180	chrX_71431831_+	ncRNA_intronic
CAediting_1511181	chrX_71431861_+	ncRNA_intronic
CAediting_1511182	chrX_71431866_+	ncRNA_intronic
CAediting_1511183	chrX_71437507_+	ncRNA_intronic
CAediting_1511184	chrX_71437619_+	ncRNA_intronic
CAediting_1511185	chrX_71438019_+	ncRNA_intronic
CAediting_1511186	chrX_71438089_+	ncRNA_intronic
CAediting_1511187	chrX_71438886_+	ncRNA_intronic
CAediting_1511188	chrX_71441000_+	ncRNA_intronic
CAediting_1511189	chrX_71441001_+	ncRNA_intronic
CAediting_1511190	chrX_71441066_+	ncRNA_intronic
CAediting_1511191	chrX_71441082_+	ncRNA_intronic
CAediting_1511192	chrX_71441123_+	ncRNA_intronic
CAediting_1511193	chrX_71441136_+	ncRNA_intronic
CAediting_1511194	chrX_71443737_+	ncRNA_intronic
CAediting_1511195	chrX_71443963_+	ncRNA_intronic
CAediting_1511196	chrX_71443985_+	ncRNA_intronic
CAediting_1511197	chrX_71444441_+	ncRNA_intronic
CAediting_1511198	chrX_71444469_+	ncRNA_intronic
CAediting_1511199	chrX_71444485_+	ncRNA_intronic
CAediting_1511200	chrX_71444494_+	ncRNA_intronic
CAediting_1511201	chrX_71444863_+	ncRNA_intronic
CAediting_1511202	chrX_71444873_+	ncRNA_intronic
CAediting_1511203	chrX_71444875_+	ncRNA_intronic
CAediting_1511204	chrX_71445135_+	ncRNA_intronic
CAediting_1511205	chrX_71445143_+	ncRNA_intronic
CAediting_1511206	chrX_71445179_+	ncRNA_intronic
CAediting_1511207	chrX_71445180_+	ncRNA_intronic
CAediting_1511208	chrX_71445189_+	ncRNA_intronic
CAediting_1511209	chrX_71445193_+	ncRNA_intronic
CAediting_1511210	chrX_71445220_+	ncRNA_intronic
CAediting_1511211	chrX_71445221_+	ncRNA_intronic
CAediting_1511212	chrX_71445975_+	ncRNA_intronic
CAediting_1511213	chrX_71445991_+	ncRNA_intronic
CAediting_1511214	chrX_71450438_+	ncRNA_intronic
CAediting_1511215	chrX_71462375_+	ncRNA_intronic
CAediting_1511216	chrX_71464443_+	ncRNA_intronic
CAediting_1511217	chrX_71464449_+	ncRNA_intronic
CAediting_1511218	chrX_71464498_+	ncRNA_intronic
CAediting_1511219	chrX_71464509_+	ncRNA_intronic
CAediting_1511220	chrX_71464519_+	ncRNA_intronic
CAediting_1511221	chrX_71464540_+	ncRNA_intronic
CAediting_1511222	chrX_71464549_+	ncRNA_intronic
CAediting_1511223	chrX_71464553_+	ncRNA_intronic
CAediting_1511224	chrX_71464555_+	ncRNA_intronic
CAediting_1511225	chrX_71464558_+	ncRNA_intronic
CAediting_1511226	chrX_71464602_+	ncRNA_intronic
CAediting_1511227	chrX_71464612_+	ncRNA_intronic
CAediting_1511228	chrX_71464626_+	ncRNA_intronic
CAediting_1511229	chrX_71464638_+	ncRNA_intronic
CAediting_1511230	chrX_71464651_+	ncRNA_intronic
CAediting_1511231	chrX_71464661_+	ncRNA_intronic
CAediting_1511232	chrX_71464666_+	ncRNA_intronic
CAediting_1511233	chrX_71464687_+	ncRNA_intronic
CAediting_1511234	chrX_71465008_+	ncRNA_intronic
CAediting_1511235	chrX_71465009_+	ncRNA_intronic
CAediting_1511236	chrX_71465017_+	ncRNA_intronic
CAediting_1511237	chrX_71465022_+	ncRNA_intronic
CAediting_1511238	chrX_71465054_+	ncRNA_intronic
CAediting_1511239	chrX_71465073_+	ncRNA_intronic
CAediting_1511240	chrX_71465202_+	ncRNA_intronic
CAediting_1511241	chrX_71466311_+	ncRNA_exonic
CAediting_1511242	chrX_71466327_+	ncRNA_exonic
CAediting_1511243	chrX_71466346_+	ncRNA_exonic
CAediting_1511244	chrX_71466347_+	ncRNA_exonic
CAediting_1511245	chrX_71466364_+	ncRNA_exonic
CAediting_1511246	chrX_71466376_+	ncRNA_exonic
CAediting_1511247	chrX_71466377_+	ncRNA_exonic
CAediting_1511248	chrX_71466392_+	ncRNA_exonic
CAediting_1511249	chrX_71466404_+	ncRNA_exonic
CAediting_1511250	chrX_71466478_+	ncRNA_exonic
CAediting_1511251	chrX_71466495_+	ncRNA_exonic
CAediting_1511252	chrX_71466539_+	ncRNA_intronic
CAediting_1511253	chrX_71466543_+	ncRNA_intronic
CAediting_1511254	chrX_71466544_+	ncRNA_intronic
CAediting_1511255	chrX_71466558_+	ncRNA_intronic
CAediting_1511256	chrX_71466561_+	ncRNA_intronic
CAediting_1511257	chrX_71466578_+	ncRNA_intronic
CAediting_1511258	chrX_71466598_+	ncRNA_intronic
CAediting_1511259	chrX_71466607_+	ncRNA_intronic
CAediting_1511260	chrX_71466652_+	ncRNA_intronic
CAediting_1511261	chrX_71466654_+	ncRNA_intronic
CAediting_1511262	chrX_71466674_+	ncRNA_intronic
CAediting_1511263	chrX_71466703_+	ncRNA_intronic
CAediting_1511264	chrX_71466713_+	ncRNA_intronic
CAediting_1511265	chrX_71466728_+	ncRNA_intronic
CAediting_1511266	chrX_71466729_+	ncRNA_intronic
CAediting_1511267	chrX_71466741_+	ncRNA_intronic
CAediting_1511268	chrX_71466755_+	ncRNA_intronic
CAediting_1511269	chrX_71466768_+	ncRNA_intronic
CAediting_1511270	chrX_71469511_+	ncRNA_intronic
CAediting_1511271	chrX_71508562_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1510981	chrX_71372311_+	SINE	Alu	AluSz
CAediting_1510982	chrX_71375733_+	SINE	Alu	AluSx
CAediting_1510983	chrX_71381528_+	SINE	Alu	AluSp
CAediting_1510984	chrX_71390004_+	SINE	Alu	AluSz
CAediting_1510985	chrX_71390620_+	SINE	Alu	AluJo
CAediting_1510986	chrX_71390646_+	SINE	Alu	AluJo
CAediting_1510987	chrX_71390875_+	SINE	Alu	AluSq2
CAediting_1510988	chrX_71391060_+	SINE	Alu	AluJo
CAediting_1510989	chrX_71391068_+	SINE	Alu	AluJo
CAediting_1510990	chrX_71396799_+	SINE	Alu	AluJb
CAediting_1510991	chrX_71396830_+	SINE	Alu	AluJb
CAediting_1510992	chrX_71396842_+	SINE	Alu	AluJb
CAediting_1510993	chrX_71396896_+	SINE	Alu	AluJb
CAediting_1510994	chrX_71396904_+	SINE	Alu	AluJb
CAediting_1510995	chrX_71396910_+	SINE	Alu	AluJb
CAediting_1510996	chrX_71396921_+	SINE	Alu	AluJb
CAediting_1510997	chrX_71398179_+	SINE	Alu	AluSg
CAediting_1510998	chrX_71405506_+	SINE	Alu	AluSx
CAediting_1510999	chrX_71405531_+	SINE	Alu	AluSx
CAediting_1511000	chrX_71405613_+	SINE	Alu	AluSx
CAediting_1511001	chrX_71405751_+	SINE	Alu	AluJo
CAediting_1511002	chrX_71406067_+	SINE	Alu	AluSq2
CAediting_1511003	chrX_71406095_+	SINE	Alu	AluSq2
CAediting_1511004	chrX_71406096_+	SINE	Alu	AluSq2
CAediting_1511005	chrX_71406109_+	SINE	Alu	AluSq2
CAediting_1511006	chrX_71406119_+	SINE	Alu	AluSq2
CAediting_1511007	chrX_71406143_+	SINE	Alu	AluSq2
CAediting_1511008	chrX_71406164_+	SINE	Alu	AluSq2
CAediting_1511009	chrX_71406167_+	SINE	Alu	AluSq2
CAediting_1511010	chrX_71406168_+	SINE	Alu	AluSq2
CAediting_1511011	chrX_71406171_+	SINE	Alu	AluSq2
CAediting_1511012	chrX_71406173_+	SINE	Alu	AluSq2
CAediting_1511013	chrX_71406178_+	SINE	Alu	AluSq2
CAediting_1511014	chrX_71406182_+	SINE	Alu	AluSq2
CAediting_1511015	chrX_71406208_+	SINE	Alu	AluSq2
CAediting_1511016	chrX_71406209_+	SINE	Alu	AluSq2
CAediting_1511017	chrX_71406214_+	SINE	Alu	AluSq2
CAediting_1511018	chrX_71408381_+	SINE	Alu	AluSg
CAediting_1511019	chrX_71408416_+	SINE	Alu	AluSg
CAediting_1511020	chrX_71408417_+	SINE	Alu	AluSg
CAediting_1511021	chrX_71408421_+	SINE	Alu	AluSg
CAediting_1511022	chrX_71408434_+	SINE	Alu	AluSg
CAediting_1511023	chrX_71408446_+	SINE	Alu	AluSg
CAediting_1511024	chrX_71408458_+	SINE	Alu	AluSg
CAediting_1511025	chrX_71408482_+	SINE	Alu	AluSg
CAediting_1511026	chrX_71408491_+	SINE	Alu	AluSg
CAediting_1511027	chrX_71408497_+	SINE	Alu	AluSg
CAediting_1511028	chrX_71408500_+	SINE	Alu	AluSg
CAediting_1511029	chrX_71408514_+	SINE	Alu	AluSg
CAediting_1511030	chrX_71408517_+	SINE	Alu	AluSg
CAediting_1511031	chrX_71408539_+	SINE	Alu	AluSg
CAediting_1511032	chrX_71408546_+	SINE	Alu	AluSg
CAediting_1511033	chrX_71408567_+	SINE	Alu	AluSg
CAediting_1511035	chrX_71408771_+	SINE	Alu	AluYc
CAediting_1511036	chrX_71408776_+	SINE	Alu	AluYc
CAediting_1511037	chrX_71408792_+	SINE	Alu	AluYc
CAediting_1511038	chrX_71408793_+	SINE	Alu	AluYc
CAediting_1511039	chrX_71408797_+	SINE	Alu	AluYc
CAediting_1511040	chrX_71408808_+	SINE	Alu	AluYc
CAediting_1511041	chrX_71408836_+	SINE	Alu	AluYc
CAediting_1511042	chrX_71408851_+	SINE	Alu	AluYc
CAediting_1511043	chrX_71408852_+	SINE	Alu	AluYc
CAediting_1511044	chrX_71408853_+	SINE	Alu	AluYc
CAediting_1511045	chrX_71408857_+	SINE	Alu	AluYc
CAediting_1511046	chrX_71408860_+	SINE	Alu	AluYc
CAediting_1511047	chrX_71408867_+	SINE	Alu	AluYc
CAediting_1511048	chrX_71408877_+	SINE	Alu	AluYc
CAediting_1511049	chrX_71408920_+	SINE	Alu	AluYc
CAediting_1511050	chrX_71409255_+	SINE	Alu	AluJo
CAediting_1511051	chrX_71409265_+	SINE	Alu	AluJo
CAediting_1511052	chrX_71409267_+	SINE	Alu	AluJo
CAediting_1511053	chrX_71409311_+	SINE	Alu	AluJo
CAediting_1511054	chrX_71409337_+	SINE	Alu	AluJo
CAediting_1511055	chrX_71409376_+	SINE	Alu	AluJo
CAediting_1511056	chrX_71409389_+	SINE	Alu	AluJo
CAediting_1511057	chrX_71409390_+	SINE	Alu	AluJo
CAediting_1511058	chrX_71409391_+	SINE	Alu	AluJo
CAediting_1511059	chrX_71409397_+	SINE	Alu	AluJo
CAediting_1511060	chrX_71409403_+	SINE	Alu	AluJo
CAediting_1511061	chrX_71409409_+	SINE	Alu	AluJo
CAediting_1511062	chrX_71409912_+	SINE	Alu	AluSg
CAediting_1511063	chrX_71409919_+	SINE	Alu	AluSg
CAediting_1511064	chrX_71409973_+	SINE	Alu	AluSg
CAediting_1511065	chrX_71410010_+	SINE	Alu	AluSg
CAediting_1511066	chrX_71410022_+	SINE	Alu	AluSg
CAediting_1511067	chrX_71410034_+	SINE	Alu	AluSg
CAediting_1511068	chrX_71410093_+	SINE	Alu	AluSg
CAediting_1511069	chrX_71410152_+	SINE	Alu	AluSg
CAediting_1511070	chrX_71410159_+	SINE	Alu	AluSg
CAediting_1511071	chrX_71410165_+	SINE	Alu	AluSg
CAediting_1511072	chrX_71410175_+	SINE	Alu	AluSg
CAediting_1511073	chrX_71410834_+	SINE	Alu	AluSx
CAediting_1511074	chrX_71410948_+	SINE	Alu	AluSx
CAediting_1511075	chrX_71411045_+	SINE	Alu	AluSx
CAediting_1511076	chrX_71411097_+	SINE	Alu	AluSz
CAediting_1511077	chrX_71411098_+	SINE	Alu	AluSz
CAediting_1511078	chrX_71411140_+	SINE	Alu	AluSz
CAediting_1511079	chrX_71411153_+	SINE	Alu	AluSz
CAediting_1511080	chrX_71411181_+	SINE	Alu	AluSz
CAediting_1511081	chrX_71411182_+	SINE	Alu	AluSz
CAediting_1511082	chrX_71411186_+	SINE	Alu	AluSz
CAediting_1511083	chrX_71411394_+	SINE	Alu	AluSz6
CAediting_1511084	chrX_71411399_+	SINE	Alu	AluSz6
CAediting_1511085	chrX_71411407_+	SINE	Alu	AluSz6
CAediting_1511086	chrX_71411413_+	SINE	Alu	AluSz6
CAediting_1511087	chrX_71411420_+	SINE	Alu	AluSz6
CAediting_1511088	chrX_71411424_+	SINE	Alu	AluSz6
CAediting_1511089	chrX_71411425_+	SINE	Alu	AluSz6
CAediting_1511090	chrX_71411428_+	SINE	Alu	AluSz6
CAediting_1511091	chrX_71411429_+	SINE	Alu	AluSz6
CAediting_1511092	chrX_71411436_+	SINE	Alu	AluSz6
CAediting_1511093	chrX_71411459_+	SINE	Alu	AluSz6
CAediting_1511094	chrX_71411461_+	SINE	Alu	AluSz6
CAediting_1511095	chrX_71411467_+	SINE	Alu	AluSz6
CAediting_1511096	chrX_71412173_+	SINE	Alu	AluJr
CAediting_1511097	chrX_71412186_+	SINE	Alu	AluJr
CAediting_1511098	chrX_71412188_+	SINE	Alu	AluJr
CAediting_1511099	chrX_71412194_+	SINE	Alu	AluJr
CAediting_1511100	chrX_71412717_+	SINE	Alu	AluSc8
CAediting_1511101	chrX_71416255_+	SINE	Alu	AluJo
CAediting_1511102	chrX_71416259_+	SINE	Alu	AluJo
CAediting_1511103	chrX_71416265_+	SINE	Alu	AluJo
CAediting_1511104	chrX_71416275_+	SINE	Alu	AluJo
CAediting_1511105	chrX_71416282_+	SINE	Alu	AluJo
CAediting_1511106	chrX_71416306_+	SINE	Alu	AluJo
CAediting_1511107	chrX_71416331_+	SINE	Alu	AluJo
CAediting_1511108	chrX_71416335_+	SINE	Alu	AluJo
CAediting_1511109	chrX_71416341_+	SINE	Alu	AluJo
CAediting_1511110	chrX_71416343_+	SINE	Alu	AluJo
CAediting_1511111	chrX_71416356_+	SINE	Alu	AluJo
CAediting_1511112	chrX_71416931_+	SINE	Alu	FLAM_C
CAediting_1511113	chrX_71416944_+	SINE	Alu	FLAM_C
CAediting_1511114	chrX_71416949_+	SINE	Alu	FLAM_C
CAediting_1511115	chrX_71416955_+	SINE	Alu	FLAM_C
CAediting_1511116	chrX_71416967_+	SINE	Alu	FLAM_C
CAediting_1511117	chrX_71417376_+	SINE	Alu	AluJo
CAediting_1511118	chrX_71417382_+	SINE	Alu	AluJo
CAediting_1511119	chrX_71417420_+	SINE	Alu	AluJo
CAediting_1511120	chrX_71417586_+	SINE	Alu	AluJo
CAediting_1511121	chrX_71417599_+	SINE	Alu	AluJo
CAediting_1511122	chrX_71417603_+	SINE	Alu	AluJo
CAediting_1511123	chrX_71417616_+	SINE	Alu	AluJo
CAediting_1511124	chrX_71417619_+	SINE	Alu	AluJo
CAediting_1511125	chrX_71417625_+	SINE	Alu	AluJo
CAediting_1511126	chrX_71417626_+	SINE	Alu	AluJo
CAediting_1511127	chrX_71417638_+	SINE	Alu	AluJo
CAediting_1511128	chrX_71418115_+	SINE	Alu	AluJo
CAediting_1511129	chrX_71418211_+	SINE	Alu	AluJo
CAediting_1511130	chrX_71418223_+	SINE	Alu	AluJo
CAediting_1511131	chrX_71418294_+	SINE	Alu	AluJo
CAediting_1511132	chrX_71418325_+	SINE	Alu	AluJo
CAediting_1511133	chrX_71418332_+	SINE	Alu	AluJo
CAediting_1511134	chrX_71418335_+	SINE	Alu	AluJo
CAediting_1511135	chrX_71418371_+	SINE	Alu	AluJo
CAediting_1511136	chrX_71418947_+	SINE	Alu	AluSp
CAediting_1511137	chrX_71419028_+	SINE	Alu	AluSp
CAediting_1511138	chrX_71419035_+	SINE	Alu	AluSp
CAediting_1511139	chrX_71419041_+	SINE	Alu	AluSp
CAediting_1511140	chrX_71424510_+	SINE	Alu	AluJo
CAediting_1511141	chrX_71425358_+	SINE	Alu	AluJr
CAediting_1511142	chrX_71425383_+	SINE	Alu	AluJr
CAediting_1511143	chrX_71425385_+	SINE	Alu	AluJr
CAediting_1511144	chrX_71425497_+	SINE	Alu	AluJr
CAediting_1511145	chrX_71426172_+	SINE	Alu	FLAM_C
CAediting_1511146	chrX_71426222_+	SINE	Alu	FLAM_C
CAediting_1511147	chrX_71426223_+	SINE	Alu	FLAM_C
CAediting_1511148	chrX_71426250_+	SINE	Alu	FLAM_C
CAediting_1511149	chrX_71426256_+	SINE	Alu	FLAM_C
CAediting_1511150	chrX_71427738_+	SINE	Alu	AluSx1
CAediting_1511151	chrX_71427779_+	SINE	Alu	AluSx1
CAediting_1511152	chrX_71427783_+	SINE	Alu	AluSx1
CAediting_1511153	chrX_71427792_+	SINE	Alu	AluSx1
CAediting_1511154	chrX_71427818_+	SINE	Alu	AluSx1
CAediting_1511155	chrX_71427819_+	SINE	Alu	AluSx1
CAediting_1511156	chrX_71427828_+	SINE	Alu	AluSx1
CAediting_1511157	chrX_71427832_+	SINE	Alu	AluSx1
CAediting_1511158	chrX_71430204_+	SINE	Alu	AluY
CAediting_1511159	chrX_71430215_+	SINE	Alu	AluY
CAediting_1511160	chrX_71430218_+	SINE	Alu	AluY
CAediting_1511161	chrX_71430220_+	SINE	Alu	AluY
CAediting_1511162	chrX_71430222_+	SINE	Alu	AluY
CAediting_1511163	chrX_71430260_+	SINE	Alu	AluY
CAediting_1511164	chrX_71430270_+	SINE	Alu	AluY
CAediting_1511165	chrX_71431243_+	SINE	Alu	AluSz
CAediting_1511166	chrX_71431705_+	SINE	Alu	AluSc
CAediting_1511167	chrX_71431729_+	SINE	Alu	AluSc
CAediting_1511168	chrX_71431733_+	SINE	Alu	AluSc
CAediting_1511169	chrX_71431753_+	SINE	Alu	AluSc
CAediting_1511170	chrX_71431755_+	SINE	Alu	AluSc
CAediting_1511171	chrX_71431757_+	SINE	Alu	AluSc
CAediting_1511172	chrX_71431759_+	SINE	Alu	AluSc
CAediting_1511173	chrX_71431769_+	SINE	Alu	AluSc
CAediting_1511174	chrX_71431785_+	SINE	Alu	AluSc
CAediting_1511175	chrX_71431789_+	SINE	Alu	AluSc
CAediting_1511176	chrX_71431795_+	SINE	Alu	AluSc
CAediting_1511177	chrX_71431805_+	SINE	Alu	AluSc
CAediting_1511178	chrX_71431818_+	SINE	Alu	AluSc
CAediting_1511179	chrX_71431822_+	SINE	Alu	AluSc
CAediting_1511180	chrX_71431831_+	SINE	Alu	AluSc
CAediting_1511181	chrX_71431861_+	SINE	Alu	AluSc
CAediting_1511182	chrX_71431866_+	SINE	Alu	AluSc
CAediting_1511183	chrX_71437507_+	SINE	Alu	AluSz6
CAediting_1511184	chrX_71437619_+	SINE	Alu	AluSz6
CAediting_1511185	chrX_71438019_+	SINE	Alu	AluSx
CAediting_1511186	chrX_71438089_+	SINE	Alu	AluSx
CAediting_1511187	chrX_71438886_+	SINE	Alu	AluSx
CAediting_1511188	chrX_71441000_+	SINE	Alu	AluSz6
CAediting_1511189	chrX_71441001_+	SINE	Alu	AluSz6
CAediting_1511190	chrX_71441066_+	SINE	Alu	AluSz6
CAediting_1511191	chrX_71441082_+	SINE	Alu	AluSz6
CAediting_1511192	chrX_71441123_+	SINE	Alu	AluSz6
CAediting_1511193	chrX_71441136_+	SINE	Alu	AluSz6
CAediting_1511194	chrX_71443737_+	SINE	Alu	AluSx1
CAediting_1511195	chrX_71443963_+	SINE	Alu	AluSx1
CAediting_1511196	chrX_71443985_+	SINE	Alu	AluSx1
CAediting_1511197	chrX_71444441_+	SINE	Alu	AluJb
CAediting_1511198	chrX_71444469_+	SINE	Alu	AluJb
CAediting_1511199	chrX_71444485_+	SINE	Alu	AluJb
CAediting_1511200	chrX_71444494_+	SINE	Alu	AluJb
CAediting_1511201	chrX_71444863_+	SINE	Alu	AluY
CAediting_1511202	chrX_71444873_+	SINE	Alu	AluY
CAediting_1511203	chrX_71444875_+	SINE	Alu	AluY
CAediting_1511204	chrX_71445135_+	SINE	Alu	AluSz6
CAediting_1511205	chrX_71445143_+	SINE	Alu	AluSz6
CAediting_1511206	chrX_71445179_+	SINE	Alu	AluSz6
CAediting_1511207	chrX_71445180_+	SINE	Alu	AluSz6
CAediting_1511208	chrX_71445189_+	SINE	Alu	AluSz6
CAediting_1511209	chrX_71445193_+	SINE	Alu	AluSz6
CAediting_1511210	chrX_71445220_+	SINE	Alu	AluSz6
CAediting_1511211	chrX_71445221_+	SINE	Alu	AluSz6
CAediting_1511212	chrX_71445975_+	SINE	Alu	AluSx
CAediting_1511213	chrX_71445991_+	SINE	Alu	AluSx
CAediting_1511214	chrX_71450438_+	SINE	Alu	AluSz6
CAediting_1511215	chrX_71462375_+	SINE	Alu	AluSc
CAediting_1511216	chrX_71464443_+	SINE	Alu	AluSx
CAediting_1511217	chrX_71464449_+	SINE	Alu	AluSx
CAediting_1511218	chrX_71464498_+	SINE	Alu	AluSx
CAediting_1511219	chrX_71464509_+	SINE	Alu	AluSx
CAediting_1511220	chrX_71464519_+	SINE	Alu	AluSx
CAediting_1511221	chrX_71464540_+	SINE	Alu	AluSx
CAediting_1511222	chrX_71464549_+	SINE	Alu	AluSx
CAediting_1511223	chrX_71464553_+	SINE	Alu	AluSx
CAediting_1511224	chrX_71464555_+	SINE	Alu	AluSx
CAediting_1511225	chrX_71464558_+	SINE	Alu	AluSx
CAediting_1511226	chrX_71464602_+	SINE	Alu	AluSx
CAediting_1511227	chrX_71464612_+	SINE	Alu	AluSx
CAediting_1511228	chrX_71464626_+	SINE	Alu	AluSx
CAediting_1511229	chrX_71464638_+	SINE	Alu	AluSx
CAediting_1511230	chrX_71464651_+	SINE	Alu	AluSx
CAediting_1511231	chrX_71464661_+	SINE	Alu	AluSx
CAediting_1511232	chrX_71464666_+	SINE	Alu	AluSx
CAediting_1511233	chrX_71464687_+	SINE	Alu	AluSx
CAediting_1511234	chrX_71465008_+	LINE	L2	L2c
CAediting_1511235	chrX_71465009_+	LINE	L2	L2c
CAediting_1511236	chrX_71465017_+	LINE	L2	L2c
CAediting_1511237	chrX_71465022_+	LINE	L2	L2c
CAediting_1511238	chrX_71465054_+	LINE	L2	L2c
CAediting_1511239	chrX_71465073_+	LINE	L2	L2c
CAediting_1511240	chrX_71465202_+	LINE	L2	L2c
CAediting_1511241	chrX_71466311_+	SINE	Alu	AluSz
CAediting_1511242	chrX_71466327_+	SINE	Alu	AluSz
CAediting_1511243	chrX_71466346_+	SINE	Alu	AluSz
CAediting_1511244	chrX_71466347_+	SINE	Alu	AluSz
CAediting_1511245	chrX_71466364_+	SINE	Alu	AluSz
CAediting_1511246	chrX_71466376_+	SINE	Alu	AluSz
CAediting_1511247	chrX_71466377_+	SINE	Alu	AluSz
CAediting_1511248	chrX_71466392_+	SINE	Alu	AluSz
CAediting_1511249	chrX_71466404_+	SINE	Alu	AluSz
CAediting_1511250	chrX_71466478_+	SINE	Alu	AluSx1
CAediting_1511251	chrX_71466495_+	SINE	Alu	AluSx1
CAediting_1511252	chrX_71466539_+	SINE	Alu	AluSx1
CAediting_1511253	chrX_71466543_+	SINE	Alu	AluSx1
CAediting_1511254	chrX_71466544_+	SINE	Alu	AluSx1
CAediting_1511255	chrX_71466558_+	SINE	Alu	AluSx1
CAediting_1511256	chrX_71466561_+	SINE	Alu	AluSx1
CAediting_1511257	chrX_71466578_+	SINE	Alu	AluSx1
CAediting_1511258	chrX_71466598_+	SINE	Alu	AluSx1
CAediting_1511259	chrX_71466607_+	SINE	Alu	AluSx1
CAediting_1511260	chrX_71466652_+	SINE	Alu	AluSx1
CAediting_1511261	chrX_71466654_+	SINE	Alu	AluSx1
CAediting_1511262	chrX_71466674_+	SINE	Alu	AluSx1
CAediting_1511263	chrX_71466703_+	SINE	Alu	AluSz
CAediting_1511264	chrX_71466713_+	SINE	Alu	AluSz
CAediting_1511265	chrX_71466728_+	SINE	Alu	AluSz
CAediting_1511266	chrX_71466729_+	SINE	Alu	AluSz
CAediting_1511267	chrX_71466741_+	SINE	Alu	AluSz
CAediting_1511268	chrX_71466755_+	SINE	Alu	AluSz
CAediting_1511269	chrX_71466768_+	SINE	Alu	AluSz
CAediting_1511270	chrX_71469511_+	SINE	Alu	AluJr
CAediting_1511271	chrX_71508562_+	SINE	Alu	AluJo

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RNA A-to-I editing events in the alternative splicing sites for TAF1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000147133.14.TAF1.

Correlation between RNA A-to-I editing and PSI for ENSG00000147133.14.TAF1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TAF1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TAF1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TAF1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1511225	chrX_71464558_+	ENSG00000147133.14	ENST00000373790	hsa-miR-3190-5p	71464556	71464562	7mer-m8	71464544	71464563	143.00	-16.24
CAediting_1511225	chrX_71464558_+	ENSG00000147133.14	ENST00000373790	hsa-miR-548s	71464555	71464561	7mer-m8	71464540	71464562	145.00	-11.19
CAediting_1511234	chrX_71465008_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6511a-3p	71465003	71465009	7mer-m8	71464990	71465010	157.00	-21.21
CAediting_1511234	chrX_71465008_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6511a-3p	71465003	71465009	7mer-m8	71464990	71465010	157.00	-21.21
CAediting_1511234	chrX_71465008_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6511a-3p	71465003	71465009	7mer-m8	71464990	71465010	157.00	-21.21
CAediting_1511234	chrX_71465008_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6511a-3p	71465003	71465009	7mer-m8	71464990	71465010	157.00	-21.21
CAediting_1511234	chrX_71465008_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6511b-3p	71465003	71465009	7mer-m8	71464989	71465010	149.00	-19.37
CAediting_1511234	chrX_71465008_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6511b-3p	71465003	71465009	7mer-m8	71464989	71465010	149.00	-19.37
CAediting_1511234	chrX_71465008_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6750-3p	71465005	71465011	7mer-m8	71464991	71465012	154.00	-17.76
CAediting_1511236	chrX_71465017_+	ENSG00000147133.14	ENST00000373790	hsa-miR-5699-5p	71465014	71465021	8mer-1a	71465000	71465021	148.00	-17.54
CAediting_1511240	chrX_71465202_+	ENSG00000147133.14	ENST00000373790	hsa-miR-548aj-5p	71465196	71465202	7mer-m8	71465183	71465203	154.00	-10.28
CAediting_1511240	chrX_71465202_+	ENSG00000147133.14	ENST00000373790	hsa-miR-548f-5p	71465196	71465202	7mer-m8	71465182	71465203	144.00	-7.90
CAediting_1511240	chrX_71465202_+	ENSG00000147133.14	ENST00000373790	hsa-miR-548g-5p	71465196	71465202	7mer-m8	71465183	71465203	154.00	-10.28
CAediting_1511240	chrX_71465202_+	ENSG00000147133.14	ENST00000373790	hsa-miR-548x-5p	71465196	71465202	7mer-m8	71465183	71465203	154.00	-10.28
CAediting_1511217	chrX_71464449_+	ENSG00000147133.14	ENST00000373790	hsa-miR-513a-5p	71464443	71464449	7mer-m8	71464433	71464450	144.00	-17.77
CAediting_1511217	chrX_71464449_+	ENSG00000147133.14	ENST00000373790	hsa-miR-513a-5p	71464443	71464449	7mer-m8	71464433	71464450	144.00	-17.77
CAediting_1511218	chrX_71464498_+	ENSG00000147133.14	ENST00000373790	hsa-miR-301a-5p	71464491	71464497	7mer-m8	71464476	71464498	154.00	-18.59
CAediting_1511218	chrX_71464498_+	ENSG00000147133.14	ENST00000373790	hsa-miR-301b-5p	71464491	71464497	7mer-m8	71464475	71464498	144.00	-17.83
CAediting_1511220	chrX_71464519_+	ENSG00000147133.14	ENST00000373790	hsa-miR-3190-5p	71464512	71464518	7mer-m8	71464500	71464519	151.00	-19.64
CAediting_1511222	chrX_71464549_+	ENSG00000147133.14	ENST00000373790	hsa-miR-3680-3p	71464546	71464553	8mer-1a	71464531	71464553	140.00	-13.99
CAediting_1511222	chrX_71464549_+	ENSG00000147133.14	ENST00000373790	hsa-miR-3680-3p	71464546	71464553	8mer-1a	71464531	71464553	140.00	-13.99
CAediting_1511226	chrX_71464602_+	ENSG00000147133.14	ENST00000373790	hsa-miR-3943	71464599	71464605	7mer-m8	71464585	71464606	147.00	-22.14
CAediting_1511229	chrX_71464638_+	ENSG00000147133.14	ENST00000373790	hsa-miR-1281	71464631	71464637	7mer-m8	71464622	71464638	141.00	-16.88
CAediting_1511230	chrX_71464651_+	ENSG00000147133.14	ENST00000373790	hsa-miR-324-3p	71464644	71464650	7mer-m8	71464629	71464651	149.00	-24.32
CAediting_1511233	chrX_71464687_+	ENSG00000147133.14	ENST00000373790	hsa-miR-7110-3p	71464684	71464690	7mer-m8	71464671	71464691	145.00	-18.67
CAediting_1511237	chrX_71465022_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6726-3p	71465016	71465023	8mer-1a	71465004	71465023	141.00	-14.62
CAediting_1511238	chrX_71465054_+	ENSG00000147133.14	ENST00000373790	hsa-miR-4733-5p	71465051	71465058	8mer-1a	71465038	71465058	145.00	-10.93
CAediting_1511221	chrX_71464540_+	ENSG00000147133.14	ENST00000373790	hsa-miR-374b-3p	71464537	71464544	8mer-1a	71464522	71464544	150.00	-12.46
CAediting_1511221	chrX_71464540_+	ENSG00000147133.14	ENST00000373790	hsa-miR-4756-3p	71464533	71464539	7mer-m8	71464515	71464540	151.00	-17.83
CAediting_1511223	chrX_71464553_+	ENSG00000147133.14	ENST00000373790	hsa-miR-578	71464548	71464554	7mer-m8	71464535	71464555	148.00	-9.14
CAediting_1511223	chrX_71464553_+	ENSG00000147133.14	ENST00000373790	hsa-miR-643	71464546	71464553	8mer-1a	71464531	71464553	147.00	-12.34
CAediting_1511231	chrX_71464661_+	ENSG00000147133.14	ENST00000373790	hsa-miR-4634	71464658	71464665	8mer-1a	71464647	71464665	151.00	-24.68

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1511217	chrX_71464449_+	ENSG00000147133.14	ENST00000373790	hsa-miR-10399-5p	71464444	71464450	7mer-m8	71464430	71464451	148	-10
CAediting_1511233	chrX_71464687_+	ENSG00000147133.14	ENST00000373790	hsa-miR-130b-5p	71464684	71464690	7mer-m8	71464668	71464691	149	-17.06
CAediting_1511236	chrX_71465017_+	ENSG00000147133.14	ENST00000373790	hsa-miR-18b-3p	71465014	71465021	8mer-1a	71464996	71465021	141	-16.13
CAediting_1511227	chrX_71464612_+	ENSG00000147133.14	ENST00000373790	hsa-miR-1976	71464609	71464616	8mer-1a	71464596	71464616	149	-24.39
CAediting_1511228	chrX_71464626_+	ENSG00000147133.14	ENST00000373790	hsa-miR-26a-5p	71464619	71464626	8mer-1a	71464605	71464626	152	-13.83
CAediting_1511228	chrX_71464626_+	ENSG00000147133.14	ENST00000373790	hsa-miR-26a-5p	71464619	71464626	8mer-1a	71464605	71464626	152	-13.83
CAediting_1511225	chrX_71464558_+	ENSG00000147133.14	ENST00000373790	hsa-miR-3064-5p	71464557	71464562	6mer	71464542	71464563	140	-17.25
CAediting_1511236	chrX_71465017_+	ENSG00000147133.14	ENST00000373790	hsa-miR-3157-3p	71465015	71465022	8mer-1a	71465002	71465022	144	-15.89
CAediting_1511237	chrX_71465022_+	ENSG00000147133.14	ENST00000373790	hsa-miR-3157-3p	71465015	71465022	8mer-1a	71465002	71465022	144	-15.89
CAediting_1511219	chrX_71464509_+	ENSG00000147133.14	ENST00000373790	hsa-miR-320e	71464506	71464512	7mer-m8	71464497	71464513	146	-15.6
CAediting_1511219	chrX_71464509_+	ENSG00000147133.14	ENST00000373790	hsa-miR-3663-5p	71464503	71464509	7mer-m8	71464491	71464510	148	-19.94
CAediting_1511230	chrX_71464651_+	ENSG00000147133.14	ENST00000373790	hsa-miR-3680-5p	71464646	71464652	7mer-m8	71464631	71464653	141	-16.92
CAediting_1511230	chrX_71464651_+	ENSG00000147133.14	ENST00000373790	hsa-miR-3680-5p	71464646	71464652	7mer-m8	71464631	71464653	141	-16.92
CAediting_1511216	chrX_71464443_+	ENSG00000147133.14	ENST00000373790	hsa-miR-3934-5p	71464440	71464446	7mer-m8	71464425	71464447	151	-21.42
CAediting_1511230	chrX_71464651_+	ENSG00000147133.14	ENST00000373790	hsa-miR-4436b-5p	71464650	71464655	6mer	71464634	71464656	143	-28.28
CAediting_1511230	chrX_71464651_+	ENSG00000147133.14	ENST00000373790	hsa-miR-4436b-5p	71464650	71464655	6mer	71464634	71464656	143	-28.28
CAediting_1511228	chrX_71464626_+	ENSG00000147133.14	ENST00000373790	hsa-miR-4465	71464619	71464626	8mer-1a	71464600	71464626	148	-16.7
CAediting_1511220	chrX_71464519_+	ENSG00000147133.14	ENST00000373790	hsa-miR-4716-5p	71464517	71464523	7mer-m8	71464503	71464524	140	-10.69
CAediting_1511224	chrX_71464555_+	ENSG00000147133.14	ENST00000373790	hsa-miR-4735-5p	71464552	71464558	7mer-m8	71464538	71464559	140	-5.48
CAediting_1511225	chrX_71464558_+	ENSG00000147133.14	ENST00000373790	hsa-miR-4735-5p	71464552	71464558	7mer-m8	71464538	71464559	140	-5.48
CAediting_1511220	chrX_71464519_+	ENSG00000147133.14	ENST00000373790	hsa-miR-4781-3p	71464515	71464521	7mer-m8	71464504	71464522	144	-13.79
CAediting_1511225	chrX_71464558_+	ENSG00000147133.14	ENST00000373790	hsa-miR-4794	71464556	71464562	7mer-m8	71464542	71464563	140	-12.3
CAediting_1511216	chrX_71464443_+	ENSG00000147133.14	ENST00000373790	hsa-miR-552-3p	71464441	71464448	8mer-1a	71464428	71464448	140	-14.36
CAediting_1511232	chrX_71464666_+	ENSG00000147133.14	ENST00000373790	hsa-miR-5693	71464662	71464668	7mer-m8	71464649	71464669	146	-22.38
CAediting_1511219	chrX_71464509_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6131	71464504	71464510	7mer-m8	71464493	71464511	140	-15.4
CAediting_1511217	chrX_71464449_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6504-3p	71464444	71464450	7mer-m8	71464430	71464451	145	-14.48
CAediting_1511225	chrX_71464558_+	ENSG00000147133.14	ENST00000373790	hsa-miR-664a-5p	71464556	71464562	7mer-m8	71464540	71464563	141	-13.02
CAediting_1511227	chrX_71464612_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6747-3p	71464607	71464614	8mer-1a	71464592	71464614	149	-23.68
CAediting_1511226	chrX_71464602_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6778-3p	71464598	71464604	7mer-m8	71464586	71464605	141	-15.45
CAediting_1511221	chrX_71464540_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6832-5p	71464534	71464540	7mer-m8	71464519	71464541	142	-14.51
CAediting_1511229	chrX_71464638_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6836-3p	71464631	71464637	7mer-m8	71464618	71464638	145	-19.03
CAediting_1511219	chrX_71464509_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6843-3p	71464502	71464508	7mer-m8	71464490	71464509	152	-16.98
CAediting_1511219	chrX_71464509_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6848-3p	71464502	71464508	7mer-m8	71464491	71464509	140	-13.18

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000147133.14	ENST00000373790	hsa-miR-4477b	71465108	71465114	7mer-m8	71465095	71465115	169	-17.43
CAediting_573001	chr7_92204086_-	ENSG00000147133.14	ENST00000373790	hsa-miR-1285-5p	71464831	71464838	8mer-1a	71464811	71464838	141	-17.66
CAediting_1229414	chr17_67471546_+	ENSG00000147133.14	ENST00000373775	hsa-miR-548aa	71528684	71528690	7mer-m8	71528667	71528691	146	-13.09
CAediting_1229414	chr17_67471546_+	ENSG00000147133.14	ENST00000373775	hsa-miR-548aa	71529873	71529879	7mer-m8	71529850	71529880	148	-18.39
CAediting_1229414	chr17_67471546_+	ENSG00000147133.14	ENST00000437147	hsa-miR-548aa	71528684	71528690	7mer-m8	71528667	71528691	146	-13.09
CAediting_1229414	chr17_67471546_+	ENSG00000147133.14	ENST00000437147	hsa-miR-548aa	71529873	71529879	7mer-m8	71529850	71529880	148	-18.39

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_573001	chr7_92204086_-	ENSG00000147133.14	ENST00000373790	hsa-miR-1285-5p	71465275	71465282	8mer-1a	71465262	71465282	147	-12.47
CAediting_573000	chr7_92204081_-	ENSG00000147133.14	ENST00000373790	hsa-miR-1285-5p	71465275	71465282	8mer-1a	71465262	71465282	147	-12.47
CAediting_580943	chr7_100356700_+	ENSG00000147133.14	ENST00000373790	hsa-miR-6840-3p	71464220	71464226	7mer-m8	71464205	71464227	151	-24.4

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TAF1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for TAF1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_1511234	chrX_71465008_+	0.00134824671489431	0.23335866395936	.	.	.	.
LGG	CAediting_1511234	chrX_71465008_+	0.00169366156203522	0.257622775687213	.	.	.	.
BRCA	CAediting_1511234	chrX_71465008_+	1.57063037772311e-10	0.255078046191002	.	.	.	.
LIHC	CAediting_1511234	chrX_71465008_+	0.0156985835878027	0.259818906457899	.	.	.	.
CESC	CAediting_1511234	chrX_71465008_+	0.00191051171872279	0.324632335705142	.	.	0.000807337480191557	0.348834147455462
LUAD	CAediting_1511234	chrX_71465008_+	1.05999054118388e-08	0.345472199780567	.	.	.	.
COAD	CAediting_1511234	chrX_71465008_+	0.016957584087753	0.307209258797718	.	.	.	.
LUSC	CAediting_1511234	chrX_71465008_+	0.000179054281024833	0.2575772457574	0.0209525595825842	0.160406148967696	.	.
PRAD	CAediting_1511234	chrX_71465008_+	0.0344599295482915	0.15996791308915	.	.	.	.
HNSC	CAediting_1511234	chrX_71465008_+	0.00991068966959898	0.263389833465331	.	.	.	.
STAD	CAediting_1511234	chrX_71465008_+	0.032645918366353	0.189726326948826	.	.	.	.
THCA	CAediting_1511234	chrX_71465008_+	0.000126876947976189	0.225083717722289	.	.	.	.
UCEC	CAediting_1511234	chrX_71465008_+	2.84589904324207e-08	0.518231201602282	.	.	.	.
OV	CAediting_1511234	chrX_71465008_+	0.0046191991967496	0.206280386313867	.	.	.	.
PAAD	CAediting_1511234	chrX_71465008_+	4.50626163870392e-05	0.458552123154393	.	.	.	.
SARC	CAediting_1511234	chrX_71465008_+	1.7647032995943e-05	0.379488609054768	.	.	.	.
TGCT	CAediting_1511234	chrX_71465008_+	0.000243832186607726	0.475488187847296	.	.	.	.
BLCA	CAediting_1511240	chrX_71465202_+	5.44243627718403e-06	0.409715458345122	.	.	.	.
BRCA	CAediting_1511240	chrX_71465202_+	2.00493340440164e-22	0.452352952394503	.	.	.	.
LIHC	CAediting_1511240	chrX_71465202_+	0.013453277343568	0.250185568262738	.	.	.	.
CESC	CAediting_1511240	chrX_71465202_+	0.000524329367735262	0.456319029843055	.	.	0.0277764613102552	0.299536981781666
LUAD	CAediting_1511240	chrX_71465202_+	7.50673525899506e-17	0.537975772365006	.	.	.	.
LUSC	CAediting_1511240	chrX_71465202_+	3.00464577924037e-06	0.443673635479414	.	.	.	.
STAD	CAediting_1511240	chrX_71465202_+	6.61519212835823e-05	0.441245857238863	.	.	.	.
THCA	CAediting_1511240	chrX_71465202_+	0.00339123383469907	0.39179602285379	.	.	.	.
UCEC	CAediting_1511240	chrX_71465202_+	0.00535868974834552	0.268662370631707	.	.	.	.
OV	CAediting_1511240	chrX_71465202_+	8.0398456018267e-05	0.301190589320839	.	.	.	.
SARC	CAediting_1511240	chrX_71465202_+	9.32826260874388e-09	0.692328379917036	.	.	.	.

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Relation with cancer stages for TAF1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_1511240	chrX_71465202_+	0.0138592039552444	0.121307721345615
KIRC	pathologic_stage	CAediting_1511234	chrX_71465008_+	0.0215133108279048	0.159721347151286
STAD	pathologic_stage	CAediting_1511083	chrX_71411394_+	0.0122914642673756	0.335454336760816
THCA	pathologic_stage	CAediting_1511234	chrX_71465008_+	0.00026539470981199	0.215570023885086
UCEC	clinical_stage	CAediting_1511234	chrX_71465008_+	0.0431740518311128	0.201636996409941

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Relation with survival for TAF1

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
CESC	CAediting_1511240	chrX_71465202_+	0.0158877027027363	0.00578632	2092330000

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RelatedDrugs for TAF1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TAF1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
TAF1	C1839130	Dystonia 3, Torsion, X-Linked	3	CTD_human;GENOMICS_ENGLAND;ORPHANET
TAF1	C4225418	MENTAL RETARDATION, X-LINKED, SYNDROMIC 33	2	CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
TAF1	C0557874	Global developmental delay	1	GENOMICS_ENGLAND
TAF1	C3714756	Intellectual Disability	1	GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene