Home

Download

Statistics

Examples

Help

Contact

Editing gene: SUPT6H (CAeditome ID:6830)

Gene summary for SUPT6H

Gene summary

Gene information	Gene symbol	SUPT6H
	Gene ID	6830
	Gene name	SPT6 homolog, histone chaperone and transcription elongation factor
	Synonyms	SPT6\|SPT6H\|emb-5
	Cytomap	17q11.2
	Type of gene	protein-coding
	Description	transcription elongation factor SPT6histone chaperone suppressor of Ty6suppressor of Ty 6 homologtat-CT2 proteintat-cotransactivator 2 protein
	Modification date	20210518
	UniProtAcc	Q7KZ85
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
SUPT6H	GO:0042393	Transcription elongation factor SPT6	10933715

Top

RNA A-to-I events for SUPT6H

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000109111.13

RNA A-to-I editing events in Cancer.

CAediting_1171853(28663854, +), CAediting_1171854(28664337, +), CAediting_1171855(28664343, +), CAediting_1171856(28664346, +), CAediting_1171857(28664349, +), CAediting_1171858(28664355, +), CAediting_1171859(28664385, +), CAediting_1171860(28664386, +), CAediting_1171861(28664395, +), CAediting_1171862(28664417, +), CAediting_1171863(28664418, +), CAediting_1171864(28664421, +), CAediting_1171865(28664426, +), CAediting_1171866(28664427, +), CAediting_1171867(28664440, +), CAediting_1171868(28664450, +), CAediting_1171869(28664453, +), CAediting_1171870(28664484, +), CAediting_1171871(28664487, +), CAediting_1171872(28664489, +), CAediting_1171873(28664490, +), CAediting_1171874(28664493, +), CAediting_1171875(28665484, +), CAediting_1171876(28665503, +), CAediting_1171877(28665508, +), CAediting_1171878(28665548, +), CAediting_1171879(28665572, +), CAediting_1171880(28665616, +), CAediting_1171881(28665648, +), CAediting_1171882(28665652, +), CAediting_1171883(28665683, +), CAediting_1171884(28665726, +), CAediting_1171885(28666591, +), CAediting_1171886(28666602, +), CAediting_1171887(28666613, +), CAediting_1171888(28666616, +), CAediting_1171889(28666626, +), CAediting_1171890(28666632, +), CAediting_1171891(28666651, +), CAediting_1171892(28666652, +), CAediting_1171893(28666681, +), CAediting_1171894(28666691, +), CAediting_1171895(28666693, +), CAediting_1171896(28666709, +), CAediting_1171897(28666726, +), CAediting_1171898(28666739, +), CAediting_1171899(28666741, +), CAediting_1171900(28666752, +), CAediting_1171901(28666799, +), CAediting_1171902(28666809, +), CAediting_1171903(28666818, +), CAediting_1171904(28666819, +), CAediting_1171905(28666831, +), CAediting_1171906(28666833, +), CAediting_1171907(28667111, +), CAediting_1171908(28667116, +), CAediting_1171909(28667119, +), CAediting_1171910(28667122, +), CAediting_1171911(28667125, +), CAediting_1171912(28667133, +), CAediting_1171913(28667157, +), CAediting_1171914(28667165, +), CAediting_1171915(28667178, +), CAediting_1171916(28667180, +), CAediting_1171917(28667186, +), CAediting_1171918(28667187, +), CAediting_1171919(28667188, +), CAediting_1171920(28667224, +), CAediting_1171921(28667244, +), CAediting_1171922(28667250, +), CAediting_1171923(28667256, +), CAediting_1171924(28667267, +), CAediting_1171925(28667277, +), CAediting_1171926(28667283, +), CAediting_1171927(28667296, +), CAediting_1171928(28667299, +), CAediting_1171929(28667312, +), CAediting_1171930(28667321, +), CAediting_1171931(28667323, +), CAediting_1171932(28667326, +), CAediting_1171933(28667336, +), CAediting_1171934(28667351, +), CAediting_1171935(28667359, +), CAediting_1171936(28669247, +), CAediting_1171937(28669250, +), CAediting_1171938(28669253, +), CAediting_1171939(28669256, +), CAediting_1171940(28669266, +), CAediting_1171941(28669271, +), CAediting_1171942(28669272, +), CAediting_1171943(28669285, +), CAediting_1171944(28669291, +), CAediting_1171945(28669295, +), CAediting_1171946(28669321, +), CAediting_1171947(28669331, +), CAediting_1171948(28669371, +), CAediting_1171949(28669388, +), CAediting_1171950(28669400, +), CAediting_1171951(28669411, +), CAediting_1171952(28669413, +), CAediting_1171953(28669425, +), CAediting_1171954(28669460, +), CAediting_1171955(28669575, +), CAediting_1171956(28669584, +), CAediting_1171957(28669589, +), CAediting_1171958(28669594, +), CAediting_1171959(28669597, +), CAediting_1171960(28669603, +), CAediting_1171961(28669605, +), CAediting_1171962(28669608, +), CAediting_1171963(28669645, +), CAediting_1171964(28669646, +), CAediting_1171965(28669653, +), CAediting_1171966(28669701, +), CAediting_1171967(28669715, +), CAediting_1171968(28669720, +), CAediting_1171969(28669725, +), CAediting_1171970(28669728, +), CAediting_1171971(28669736, +), CAediting_1171972(28669739, +), CAediting_1171973(28669757, +), CAediting_1171974(28669759, +), CAediting_1171975(28669785, +), CAediting_1171976(28669786, +), CAediting_1171977(28669789, +), CAediting_1171978(28669793, +), CAediting_1171979(28669815, +), CAediting_1171980(28669832, +), CAediting_1171981(28669838, +), CAediting_1171982(28669843, +), CAediting_1171983(28669856, +), CAediting_1171984(28669857, +), CAediting_1171985(28669877, +), CAediting_1171986(28669881, +), CAediting_1171987(28669885, +), CAediting_1171988(28669924, +), CAediting_1171989(28672805, +), CAediting_1171990(28672807, +), CAediting_1171991(28672820, +), CAediting_1171992(28672912, +), CAediting_1171993(28672917, +), CAediting_1171994(28672926, +), CAediting_1171995(28672931, +), CAediting_1171996(28672936, +), CAediting_1171997(28672941, +), CAediting_1171998(28672943, +), CAediting_1171999(28672949, +), CAediting_1172000(28672950, +), CAediting_1172001(28672952, +), CAediting_1172002(28672955, +), CAediting_1172003(28672965, +), CAediting_1172004(28672974, +), CAediting_1172005(28672975, +), CAediting_1172006(28672980, +), CAediting_1172007(28672989, +), CAediting_1172008(28672990, +), CAediting_1172009(28672995, +), CAediting_1172010(28672997, +), CAediting_1172011(28672999, +), CAediting_1172012(28673000, +), CAediting_1172013(28673001, +), CAediting_1172014(28673004, +), CAediting_1172015(28673008, +), CAediting_1172016(28673012, +), CAediting_1172017(28673028, +), CAediting_1172018(28673030, +), CAediting_1172019(28673031, +), CAediting_1172020(28673040, +), CAediting_1172021(28673047, +), CAediting_1172022(28673052, +), CAediting_1172023(28673057, +), CAediting_1172024(28673060, +), CAediting_1172025(28673062, +), CAediting_1172026(28673063, +), CAediting_1172027(28673066, +), CAediting_1172028(28673071, +), CAediting_1172029(28673072, +), CAediting_1172030(28673076, +), CAediting_1172031(28673092, +), CAediting_1172032(28673096, +), CAediting_1172033(28673097, +), CAediting_1172034(28673101, +), CAediting_1172035(28673103, +), CAediting_1172036(28673111, +), CAediting_1172037(28673151, +), CAediting_1172038(28673163, +), CAediting_1172039(28679216, +), CAediting_1172040(28679565, +), CAediting_1172041(28679870, +), CAediting_1172042(28680056, +), CAediting_1172043(28680186, +), CAediting_1172044(28680583, +), CAediting_1172045(28680854, +),

Top

RNA editing positional annotations for SUPT6H using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1171853	chr17_28663854_+	intronic
CAediting_1171854	chr17_28664337_+	intronic
CAediting_1171855	chr17_28664343_+	intronic
CAediting_1171856	chr17_28664346_+	intronic
CAediting_1171857	chr17_28664349_+	intronic
CAediting_1171858	chr17_28664355_+	intronic
CAediting_1171859	chr17_28664385_+	intronic
CAediting_1171860	chr17_28664386_+	intronic
CAediting_1171861	chr17_28664395_+	intronic
CAediting_1171862	chr17_28664417_+	intronic
CAediting_1171863	chr17_28664418_+	intronic
CAediting_1171864	chr17_28664421_+	intronic
CAediting_1171865	chr17_28664426_+	intronic
CAediting_1171866	chr17_28664427_+	intronic
CAediting_1171867	chr17_28664440_+	intronic
CAediting_1171868	chr17_28664450_+	intronic
CAediting_1171869	chr17_28664453_+	intronic
CAediting_1171870	chr17_28664484_+	intronic
CAediting_1171871	chr17_28664487_+	intronic
CAediting_1171872	chr17_28664489_+	intronic
CAediting_1171873	chr17_28664490_+	intronic
CAediting_1171874	chr17_28664493_+	intronic
CAediting_1171875	chr17_28665484_+	intronic
CAediting_1171876	chr17_28665503_+	intronic
CAediting_1171877	chr17_28665508_+	intronic
CAediting_1171878	chr17_28665548_+	intronic
CAediting_1171879	chr17_28665572_+	intronic
CAediting_1171880	chr17_28665616_+	intronic
CAediting_1171881	chr17_28665648_+	intronic
CAediting_1171882	chr17_28665652_+	intronic
CAediting_1171883	chr17_28665683_+	intronic
CAediting_1171884	chr17_28665726_+	intronic
CAediting_1171885	chr17_28666591_+	intronic
CAediting_1171886	chr17_28666602_+	intronic
CAediting_1171887	chr17_28666613_+	intronic
CAediting_1171888	chr17_28666616_+	intronic
CAediting_1171889	chr17_28666626_+	intronic
CAediting_1171890	chr17_28666632_+	intronic
CAediting_1171891	chr17_28666651_+	intronic
CAediting_1171892	chr17_28666652_+	intronic
CAediting_1171893	chr17_28666681_+	intronic
CAediting_1171894	chr17_28666691_+	intronic
CAediting_1171895	chr17_28666693_+	intronic
CAediting_1171896	chr17_28666709_+	intronic
CAediting_1171897	chr17_28666726_+	intronic
CAediting_1171898	chr17_28666739_+	intronic
CAediting_1171899	chr17_28666741_+	intronic
CAediting_1171900	chr17_28666752_+	intronic
CAediting_1171901	chr17_28666799_+	intronic
CAediting_1171902	chr17_28666809_+	intronic
CAediting_1171903	chr17_28666818_+	intronic
CAediting_1171904	chr17_28666819_+	intronic
CAediting_1171905	chr17_28666831_+	intronic
CAediting_1171906	chr17_28666833_+	intronic
CAediting_1171907	chr17_28667111_+	intronic
CAediting_1171908	chr17_28667116_+	intronic
CAediting_1171909	chr17_28667119_+	intronic
CAediting_1171910	chr17_28667122_+	intronic
CAediting_1171911	chr17_28667125_+	intronic
CAediting_1171912	chr17_28667133_+	intronic
CAediting_1171913	chr17_28667157_+	intronic
CAediting_1171914	chr17_28667165_+	intronic
CAediting_1171915	chr17_28667178_+	intronic
CAediting_1171916	chr17_28667180_+	intronic
CAediting_1171917	chr17_28667186_+	intronic
CAediting_1171918	chr17_28667187_+	intronic
CAediting_1171919	chr17_28667188_+	intronic
CAediting_1171920	chr17_28667224_+	intronic
CAediting_1171921	chr17_28667244_+	intronic
CAediting_1171922	chr17_28667250_+	intronic
CAediting_1171923	chr17_28667256_+	intronic
CAediting_1171924	chr17_28667267_+	intronic
CAediting_1171925	chr17_28667277_+	intronic
CAediting_1171926	chr17_28667283_+	intronic
CAediting_1171927	chr17_28667296_+	intronic
CAediting_1171928	chr17_28667299_+	intronic
CAediting_1171929	chr17_28667312_+	intronic
CAediting_1171930	chr17_28667321_+	intronic
CAediting_1171931	chr17_28667323_+	intronic
CAediting_1171932	chr17_28667326_+	intronic
CAediting_1171933	chr17_28667336_+	intronic
CAediting_1171934	chr17_28667351_+	intronic
CAediting_1171935	chr17_28667359_+	intronic
CAediting_1171936	chr17_28669247_+	intronic
CAediting_1171937	chr17_28669250_+	intronic
CAediting_1171938	chr17_28669253_+	intronic
CAediting_1171939	chr17_28669256_+	intronic
CAediting_1171940	chr17_28669266_+	intronic
CAediting_1171941	chr17_28669271_+	intronic
CAediting_1171942	chr17_28669272_+	intronic
CAediting_1171943	chr17_28669285_+	intronic
CAediting_1171944	chr17_28669291_+	intronic
CAediting_1171945	chr17_28669295_+	intronic
CAediting_1171946	chr17_28669321_+	intronic
CAediting_1171947	chr17_28669331_+	intronic
CAediting_1171948	chr17_28669371_+	intronic
CAediting_1171949	chr17_28669388_+	intronic
CAediting_1171950	chr17_28669400_+	intronic
CAediting_1171951	chr17_28669411_+	intronic
CAediting_1171952	chr17_28669413_+	intronic
CAediting_1171953	chr17_28669425_+	intronic
CAediting_1171954	chr17_28669460_+	intronic
CAediting_1171955	chr17_28669575_+	intronic
CAediting_1171956	chr17_28669584_+	intronic
CAediting_1171957	chr17_28669589_+	intronic
CAediting_1171958	chr17_28669594_+	intronic
CAediting_1171959	chr17_28669597_+	intronic
CAediting_1171960	chr17_28669603_+	intronic
CAediting_1171961	chr17_28669605_+	intronic
CAediting_1171962	chr17_28669608_+	intronic
CAediting_1171963	chr17_28669645_+	intronic
CAediting_1171964	chr17_28669646_+	intronic
CAediting_1171965	chr17_28669653_+	intronic
CAediting_1171966	chr17_28669701_+	intronic
CAediting_1171967	chr17_28669715_+	intronic
CAediting_1171968	chr17_28669720_+	intronic
CAediting_1171969	chr17_28669725_+	intronic
CAediting_1171970	chr17_28669728_+	intronic
CAediting_1171971	chr17_28669736_+	intronic
CAediting_1171972	chr17_28669739_+	intronic
CAediting_1171973	chr17_28669757_+	intronic
CAediting_1171974	chr17_28669759_+	intronic
CAediting_1171975	chr17_28669785_+	intronic
CAediting_1171976	chr17_28669786_+	intronic
CAediting_1171977	chr17_28669789_+	intronic
CAediting_1171978	chr17_28669793_+	intronic
CAediting_1171979	chr17_28669815_+	intronic
CAediting_1171980	chr17_28669832_+	intronic
CAediting_1171981	chr17_28669838_+	intronic
CAediting_1171982	chr17_28669843_+	intronic
CAediting_1171983	chr17_28669856_+	intronic
CAediting_1171984	chr17_28669857_+	intronic
CAediting_1171985	chr17_28669877_+	intronic
CAediting_1171986	chr17_28669881_+	intronic
CAediting_1171987	chr17_28669885_+	intronic
CAediting_1171988	chr17_28669924_+	intronic
CAediting_1171989	chr17_28672805_+	UTR5
CAediting_1171990	chr17_28672807_+	UTR5
CAediting_1171991	chr17_28672820_+	UTR5
CAediting_1171992	chr17_28672912_+	intronic
CAediting_1171993	chr17_28672917_+	intronic
CAediting_1171994	chr17_28672926_+	intronic
CAediting_1171995	chr17_28672931_+	intronic
CAediting_1171996	chr17_28672936_+	intronic
CAediting_1171997	chr17_28672941_+	intronic
CAediting_1171998	chr17_28672943_+	intronic
CAediting_1171999	chr17_28672949_+	intronic
CAediting_1172000	chr17_28672950_+	intronic
CAediting_1172001	chr17_28672952_+	intronic
CAediting_1172002	chr17_28672955_+	intronic
CAediting_1172003	chr17_28672965_+	intronic
CAediting_1172004	chr17_28672974_+	intronic
CAediting_1172005	chr17_28672975_+	intronic
CAediting_1172006	chr17_28672980_+	intronic
CAediting_1172007	chr17_28672989_+	intronic
CAediting_1172008	chr17_28672990_+	intronic
CAediting_1172009	chr17_28672995_+	intronic
CAediting_1172010	chr17_28672997_+	intronic
CAediting_1172011	chr17_28672999_+	intronic
CAediting_1172012	chr17_28673000_+	intronic
CAediting_1172013	chr17_28673001_+	intronic
CAediting_1172014	chr17_28673004_+	intronic
CAediting_1172015	chr17_28673008_+	intronic
CAediting_1172016	chr17_28673012_+	intronic
CAediting_1172017	chr17_28673028_+	intronic
CAediting_1172018	chr17_28673030_+	intronic
CAediting_1172019	chr17_28673031_+	intronic
CAediting_1172020	chr17_28673040_+	intronic
CAediting_1172021	chr17_28673047_+	intronic
CAediting_1172022	chr17_28673052_+	intronic
CAediting_1172023	chr17_28673057_+	intronic
CAediting_1172024	chr17_28673060_+	intronic
CAediting_1172025	chr17_28673062_+	intronic
CAediting_1172026	chr17_28673063_+	intronic
CAediting_1172027	chr17_28673066_+	intronic
CAediting_1172028	chr17_28673071_+	intronic
CAediting_1172029	chr17_28673072_+	intronic
CAediting_1172030	chr17_28673076_+	intronic
CAediting_1172031	chr17_28673092_+	intronic
CAediting_1172032	chr17_28673096_+	intronic
CAediting_1172033	chr17_28673097_+	intronic
CAediting_1172034	chr17_28673101_+	intronic
CAediting_1172035	chr17_28673103_+	intronic
CAediting_1172036	chr17_28673111_+	intronic
CAediting_1172037	chr17_28673151_+	intronic
CAediting_1172038	chr17_28673163_+	intronic
CAediting_1172039	chr17_28679216_+	intronic
CAediting_1172040	chr17_28679565_+	intronic
CAediting_1172041	chr17_28679870_+	intronic
CAediting_1172042	chr17_28680056_+	intronic
CAediting_1172043	chr17_28680186_+	intronic
CAediting_1172044	chr17_28680583_+	intronic
CAediting_1172045	chr17_28680854_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1171853	chr17_28663854_+	SINE	Alu	AluJo
CAediting_1171854	chr17_28664337_+	SINE	Alu	AluSz
CAediting_1171855	chr17_28664343_+	SINE	Alu	AluSz
CAediting_1171856	chr17_28664346_+	SINE	Alu	AluSz
CAediting_1171857	chr17_28664349_+	SINE	Alu	AluSz
CAediting_1171858	chr17_28664355_+	SINE	Alu	AluSz
CAediting_1171859	chr17_28664385_+	SINE	Alu	AluSz
CAediting_1171860	chr17_28664386_+	SINE	Alu	AluSz
CAediting_1171861	chr17_28664395_+	SINE	Alu	AluSz
CAediting_1171862	chr17_28664417_+	SINE	Alu	AluSz
CAediting_1171863	chr17_28664418_+	SINE	Alu	AluSz
CAediting_1171864	chr17_28664421_+	SINE	Alu	AluSz
CAediting_1171865	chr17_28664426_+	SINE	Alu	AluSz
CAediting_1171866	chr17_28664427_+	SINE	Alu	AluSz
CAediting_1171867	chr17_28664440_+	SINE	Alu	AluSz
CAediting_1171868	chr17_28664450_+	SINE	Alu	AluSz
CAediting_1171869	chr17_28664453_+	SINE	Alu	AluSz
CAediting_1171870	chr17_28664484_+	SINE	Alu	AluSz
CAediting_1171871	chr17_28664487_+	SINE	Alu	AluSz
CAediting_1171872	chr17_28664489_+	SINE	Alu	AluSz
CAediting_1171873	chr17_28664490_+	SINE	Alu	AluSz
CAediting_1171874	chr17_28664493_+	SINE	Alu	AluSz
CAediting_1171875	chr17_28665484_+	SINE	Alu	AluSx1
CAediting_1171876	chr17_28665503_+	SINE	Alu	AluSx1
CAediting_1171877	chr17_28665508_+	SINE	Alu	AluSx1
CAediting_1171878	chr17_28665548_+	SINE	Alu	AluSx1
CAediting_1171879	chr17_28665572_+	SINE	Alu	AluSx1
CAediting_1171880	chr17_28665616_+	SINE	Alu	AluSx1
CAediting_1171881	chr17_28665648_+	SINE	Alu	AluSx1
CAediting_1171882	chr17_28665652_+	SINE	Alu	AluSx1
CAediting_1171883	chr17_28665683_+	SINE	Alu	AluSx1
CAediting_1171884	chr17_28665726_+	SINE	Alu	AluSx1
CAediting_1171885	chr17_28666591_+	SINE	Alu	AluSz
CAediting_1171886	chr17_28666602_+	SINE	Alu	AluSz
CAediting_1171887	chr17_28666613_+	SINE	Alu	AluSz
CAediting_1171888	chr17_28666616_+	SINE	Alu	AluSz
CAediting_1171889	chr17_28666626_+	SINE	Alu	AluSz
CAediting_1171890	chr17_28666632_+	SINE	Alu	AluSz
CAediting_1171891	chr17_28666651_+	SINE	Alu	AluSz
CAediting_1171892	chr17_28666652_+	SINE	Alu	AluSz
CAediting_1171893	chr17_28666681_+	SINE	Alu	AluSz
CAediting_1171894	chr17_28666691_+	SINE	Alu	AluSz
CAediting_1171895	chr17_28666693_+	SINE	Alu	AluSz
CAediting_1171896	chr17_28666709_+	SINE	Alu	AluSz
CAediting_1171897	chr17_28666726_+	SINE	Alu	AluSz
CAediting_1171898	chr17_28666739_+	SINE	Alu	AluSz
CAediting_1171899	chr17_28666741_+	SINE	Alu	AluSz
CAediting_1171900	chr17_28666752_+	SINE	Alu	AluSz
CAediting_1171901	chr17_28666799_+	SINE	Alu	AluSz
CAediting_1171902	chr17_28666809_+	SINE	Alu	AluSz
CAediting_1171903	chr17_28666818_+	SINE	Alu	AluSz
CAediting_1171904	chr17_28666819_+	SINE	Alu	AluSz
CAediting_1171905	chr17_28666831_+	SINE	Alu	AluSz
CAediting_1171906	chr17_28666833_+	SINE	Alu	AluSz
CAediting_1171907	chr17_28667111_+	SINE	Alu	AluYj4
CAediting_1171908	chr17_28667116_+	SINE	Alu	AluYj4
CAediting_1171909	chr17_28667119_+	SINE	Alu	AluYj4
CAediting_1171910	chr17_28667122_+	SINE	Alu	AluYj4
CAediting_1171911	chr17_28667125_+	SINE	Alu	AluYj4
CAediting_1171912	chr17_28667133_+	SINE	Alu	AluYj4
CAediting_1171913	chr17_28667157_+	SINE	Alu	AluYj4
CAediting_1171914	chr17_28667165_+	SINE	Alu	AluYj4
CAediting_1171915	chr17_28667178_+	SINE	Alu	AluYj4
CAediting_1171916	chr17_28667180_+	SINE	Alu	AluYj4
CAediting_1171917	chr17_28667186_+	SINE	Alu	AluYj4
CAediting_1171918	chr17_28667187_+	SINE	Alu	AluYj4
CAediting_1171919	chr17_28667188_+	SINE	Alu	AluYj4
CAediting_1171920	chr17_28667224_+	SINE	Alu	AluYj4
CAediting_1171921	chr17_28667244_+	SINE	Alu	AluYj4
CAediting_1171922	chr17_28667250_+	SINE	Alu	AluYj4
CAediting_1171923	chr17_28667256_+	SINE	Alu	AluYj4
CAediting_1171924	chr17_28667267_+	SINE	Alu	AluYj4
CAediting_1171925	chr17_28667277_+	SINE	Alu	AluYj4
CAediting_1171926	chr17_28667283_+	SINE	Alu	AluYj4
CAediting_1171927	chr17_28667296_+	SINE	Alu	AluYj4
CAediting_1171928	chr17_28667299_+	SINE	Alu	AluYj4
CAediting_1171929	chr17_28667312_+	SINE	Alu	AluYj4
CAediting_1171930	chr17_28667321_+	SINE	Alu	AluYj4
CAediting_1171931	chr17_28667323_+	SINE	Alu	AluYj4
CAediting_1171932	chr17_28667326_+	SINE	Alu	AluYj4
CAediting_1171933	chr17_28667336_+	SINE	Alu	AluYj4
CAediting_1171934	chr17_28667351_+	SINE	Alu	AluYj4
CAediting_1171935	chr17_28667359_+	SINE	Alu	AluYj4
CAediting_1171936	chr17_28669247_+	SINE	Alu	AluSx1
CAediting_1171937	chr17_28669250_+	SINE	Alu	AluSx1
CAediting_1171938	chr17_28669253_+	SINE	Alu	AluSx1
CAediting_1171939	chr17_28669256_+	SINE	Alu	AluSx1
CAediting_1171940	chr17_28669266_+	SINE	Alu	AluSx1
CAediting_1171941	chr17_28669271_+	SINE	Alu	AluSx1
CAediting_1171942	chr17_28669272_+	SINE	Alu	AluSx1
CAediting_1171943	chr17_28669285_+	SINE	Alu	AluSx1
CAediting_1171944	chr17_28669291_+	SINE	Alu	AluSx1
CAediting_1171945	chr17_28669295_+	SINE	Alu	AluSx1
CAediting_1171946	chr17_28669321_+	SINE	Alu	AluSx1
CAediting_1171947	chr17_28669331_+	SINE	Alu	AluSx1
CAediting_1171948	chr17_28669371_+	SINE	Alu	AluSx1
CAediting_1171949	chr17_28669388_+	SINE	Alu	AluSx1
CAediting_1171950	chr17_28669400_+	SINE	Alu	AluSx1
CAediting_1171951	chr17_28669411_+	SINE	Alu	AluSx1
CAediting_1171952	chr17_28669413_+	SINE	Alu	AluSx1
CAediting_1171953	chr17_28669425_+	SINE	Alu	AluSx1
CAediting_1171954	chr17_28669460_+	SINE	Alu	AluSx1
CAediting_1171955	chr17_28669575_+	SINE	Alu	AluSz
CAediting_1171956	chr17_28669584_+	SINE	Alu	AluSz
CAediting_1171957	chr17_28669589_+	SINE	Alu	AluSz
CAediting_1171958	chr17_28669594_+	SINE	Alu	AluSz
CAediting_1171959	chr17_28669597_+	SINE	Alu	AluSz
CAediting_1171960	chr17_28669603_+	SINE	Alu	AluSz
CAediting_1171961	chr17_28669605_+	SINE	Alu	AluSz
CAediting_1171962	chr17_28669608_+	SINE	Alu	AluSz
CAediting_1171963	chr17_28669645_+	SINE	Alu	AluSz
CAediting_1171964	chr17_28669646_+	SINE	Alu	AluSz
CAediting_1171966	chr17_28669701_+	SINE	Alu	AluSz6
CAediting_1171967	chr17_28669715_+	SINE	Alu	AluSz6
CAediting_1171968	chr17_28669720_+	SINE	Alu	AluSz6
CAediting_1171969	chr17_28669725_+	SINE	Alu	AluSz6
CAediting_1171970	chr17_28669728_+	SINE	Alu	AluSz6
CAediting_1171971	chr17_28669736_+	SINE	Alu	AluSz6
CAediting_1171972	chr17_28669739_+	SINE	Alu	AluSz6
CAediting_1171973	chr17_28669757_+	SINE	Alu	AluSz6
CAediting_1171974	chr17_28669759_+	SINE	Alu	AluSz6
CAediting_1171975	chr17_28669785_+	SINE	Alu	AluSz6
CAediting_1171976	chr17_28669786_+	SINE	Alu	AluSz6
CAediting_1171977	chr17_28669789_+	SINE	Alu	AluSz6
CAediting_1171978	chr17_28669793_+	SINE	Alu	AluSz6
CAediting_1171979	chr17_28669815_+	SINE	Alu	AluSz6
CAediting_1171980	chr17_28669832_+	SINE	Alu	AluSz6
CAediting_1171981	chr17_28669838_+	SINE	Alu	AluSz6
CAediting_1171982	chr17_28669843_+	SINE	Alu	AluSz6
CAediting_1171983	chr17_28669856_+	SINE	Alu	AluSz6
CAediting_1171984	chr17_28669857_+	SINE	Alu	AluSz6
CAediting_1171985	chr17_28669877_+	SINE	Alu	AluSz6
CAediting_1171986	chr17_28669881_+	SINE	Alu	AluSz6
CAediting_1171987	chr17_28669885_+	SINE	Alu	AluSz6
CAediting_1171988	chr17_28669924_+	SINE	Alu	AluSz6
CAediting_1171989	chr17_28672805_+	SINE	Alu	AluSc
CAediting_1171990	chr17_28672807_+	SINE	Alu	AluSc
CAediting_1171991	chr17_28672820_+	SINE	Alu	AluSc
CAediting_1171992	chr17_28672912_+	SINE	Alu	AluSx
CAediting_1171993	chr17_28672917_+	SINE	Alu	AluSx
CAediting_1171994	chr17_28672926_+	SINE	Alu	AluSx
CAediting_1171995	chr17_28672931_+	SINE	Alu	AluSx
CAediting_1171996	chr17_28672936_+	SINE	Alu	AluSx
CAediting_1171997	chr17_28672941_+	SINE	Alu	AluSx
CAediting_1171998	chr17_28672943_+	SINE	Alu	AluSx
CAediting_1171999	chr17_28672949_+	SINE	Alu	AluSx
CAediting_1172000	chr17_28672950_+	SINE	Alu	AluSx
CAediting_1172001	chr17_28672952_+	SINE	Alu	AluSx
CAediting_1172002	chr17_28672955_+	SINE	Alu	AluSx
CAediting_1172003	chr17_28672965_+	SINE	Alu	AluSx
CAediting_1172004	chr17_28672974_+	SINE	Alu	AluSx
CAediting_1172005	chr17_28672975_+	SINE	Alu	AluSx
CAediting_1172006	chr17_28672980_+	SINE	Alu	AluSx
CAediting_1172007	chr17_28672989_+	SINE	Alu	AluSx
CAediting_1172008	chr17_28672990_+	SINE	Alu	AluSx
CAediting_1172009	chr17_28672995_+	SINE	Alu	AluSx
CAediting_1172010	chr17_28672997_+	SINE	Alu	AluSx
CAediting_1172011	chr17_28672999_+	SINE	Alu	AluSx
CAediting_1172012	chr17_28673000_+	SINE	Alu	AluSx
CAediting_1172013	chr17_28673001_+	SINE	Alu	AluSx
CAediting_1172014	chr17_28673004_+	SINE	Alu	AluSx
CAediting_1172015	chr17_28673008_+	SINE	Alu	AluSx
CAediting_1172016	chr17_28673012_+	SINE	Alu	AluSx
CAediting_1172017	chr17_28673028_+	SINE	Alu	AluSx
CAediting_1172018	chr17_28673030_+	SINE	Alu	AluSx
CAediting_1172019	chr17_28673031_+	SINE	Alu	AluSx
CAediting_1172020	chr17_28673040_+	SINE	Alu	AluSx
CAediting_1172021	chr17_28673047_+	SINE	Alu	AluSx
CAediting_1172022	chr17_28673052_+	SINE	Alu	AluSx
CAediting_1172023	chr17_28673057_+	SINE	Alu	AluSx
CAediting_1172024	chr17_28673060_+	SINE	Alu	AluSx
CAediting_1172025	chr17_28673062_+	SINE	Alu	AluSx
CAediting_1172026	chr17_28673063_+	SINE	Alu	AluSx
CAediting_1172027	chr17_28673066_+	SINE	Alu	AluSx
CAediting_1172028	chr17_28673071_+	SINE	Alu	AluSx
CAediting_1172029	chr17_28673072_+	SINE	Alu	AluSx
CAediting_1172030	chr17_28673076_+	SINE	Alu	AluSx
CAediting_1172031	chr17_28673092_+	SINE	Alu	AluSx
CAediting_1172032	chr17_28673096_+	SINE	Alu	AluSx
CAediting_1172033	chr17_28673097_+	SINE	Alu	AluSx
CAediting_1172034	chr17_28673101_+	SINE	Alu	AluSx
CAediting_1172035	chr17_28673103_+	SINE	Alu	AluSx
CAediting_1172036	chr17_28673111_+	SINE	Alu	AluSx
CAediting_1172037	chr17_28673151_+	SINE	Alu	AluSx
CAediting_1172038	chr17_28673163_+	SINE	Alu	AluSx
CAediting_1172039	chr17_28679216_+	SINE	Alu	AluSz
CAediting_1172040	chr17_28679565_+	SINE	Alu	AluY
CAediting_1172041	chr17_28679870_+	SINE	Alu	AluSx1
CAediting_1172042	chr17_28680056_+	SINE	Alu	AluSq2
CAediting_1172043	chr17_28680186_+	SINE	Alu	AluSq2
CAediting_1172044	chr17_28680583_+	SINE	Alu	AluSq2
CAediting_1172045	chr17_28680854_+	SINE	Alu	AluY

Top

RNA A-to-I editing events in the alternative splicing sites for SUPT6H

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000109111.13.SUPT6H.

Correlation between RNA A-to-I editing and PSI for ENSG00000109111.13.SUPT6H.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for SUPT6H

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for SUPT6H

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for SUPT6H

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for SUPT6H

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for SUPT6H

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_1171922	chr17_28667250_+	.	.	0.0240530754725018	0.166308466322573	.	.

Top

Relation with cancer stages for SUPT6H

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	clinical_stage	CAediting_1171922	chr17_28667250_+	0.044861959886425	-0.311182906923198
ESCA	pathologic_stage	CAediting_1171915	chr17_28667178_+	0.0378054840704933	0.212336408889147
ESCA	pathologic_stage	CAediting_1171923	chr17_28667256_+	0.0318719098111663	0.231642811403347
ESCA	pathologic_stage	CAediting_1172030	chr17_28673076_+	0.036163570967114	0.316780245937784
STAD	pathologic_stage	CAediting_1171915	chr17_28667178_+	0.0478487322510513	-0.15718522203654
STAD	pathologic_stage	CAediting_1171917	chr17_28667186_+	0.0228685056662564	-0.197240868101136

Top

Relation with survival for SUPT6H

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for SUPT6H

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for SUPT6H

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene