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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: SULT1C2 (CAeditome ID:6819)

Gene summary for SULT1C2

check button Gene summary
Gene informationGene symbol

SULT1C2

Gene ID

6819

Gene namesulfotransferase family 1C member 2
SynonymsST1C1|ST1C2|SULT1C1|humSULTC2
Cytomap

2q12.3

Type of geneprotein-coding
Descriptionsulfotransferase 1C2SULT1C#1sulfotransferase 1C1sulfotransferase family, cytosolic, 1C, member 1sulfotransferase family, cytosolic, 1C, member 2
Modification date20210518
UniProtAcc

O00338

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
SULT1C2

GO:0051923

Sulfotransferase 1C2

19548878

SULT1C2

GO:0008146

Sulfotransferase 1C2

19548878

SULT1C2

GO:0008146

Sulfotransferase 1C2

20056724

SULT1C2

GO:0051923

Sulfotransferase 1C2

20056724


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RNA A-to-I events for SULT1C2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000198203.8
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_205378(108295824, +), CAediting_205379(108295837, +), CAediting_205380(108295863, +), CAediting_205381(108295893, +), CAediting_205382(108295897, +), CAediting_205383(108295906, +), CAediting_205384(108295911, +), CAediting_205385(108295923, +), CAediting_205386(108295933, +), CAediting_205387(108295935, +), CAediting_205388(108295973, +), CAediting_205389(108295975, +), CAediting_205390(108296028, +), CAediting_205391(108296029, +), CAediting_205392(108296050, +), CAediting_205393(108296051, +), CAediting_205394(108296055, +), CAediting_205395(108296064, +), CAediting_205396(108296067, +), CAediting_205397(108296475, +), CAediting_205398(108296476, +), CAediting_205399(108296477, +), CAediting_205400(108296499, +), CAediting_205401(108296507, +), CAediting_205402(108296508, +), CAediting_205403(108296513, +), CAediting_205404(108296532, +), CAediting_205405(108296551, +), CAediting_205406(108296552, +), CAediting_205407(108296555, +), CAediting_205408(108296569, +), CAediting_205409(108296577, +), CAediting_205410(108296578, +), CAediting_205411(108296581, +), CAediting_205412(108296587, +), CAediting_205413(108296588, +), CAediting_205414(108296597, +), CAediting_205415(108296618, +), CAediting_205416(108296627, +), CAediting_205417(108296633, +), CAediting_205418(108296636, +), CAediting_205419(108296642, +), CAediting_205420(108296653, +), CAediting_205421(108296662, +), CAediting_205422(108296675, +), CAediting_205423(108296682, +), CAediting_205424(108296687, +), CAediting_205425(108296690, +), CAediting_205426(108296712, +), CAediting_205427(108296713, +), CAediting_205428(108296720, +), CAediting_205429(108296727, +), CAediting_205430(108298393, +), CAediting_205431(108298397, +), CAediting_205432(108298405, +), CAediting_205433(108298422, +), CAediting_205434(108298432, +), CAediting_205435(108298437, +), CAediting_205436(108298438, +), CAediting_205437(108298443, +), CAediting_205438(108298448, +), CAediting_205439(108298468, +), CAediting_205440(108298473, +), CAediting_205441(108298474, +), CAediting_205442(108298478, +), CAediting_205443(108298486, +), CAediting_205444(108298491, +), CAediting_205445(108298500, +), CAediting_205446(108298519, +), CAediting_205447(108298565, +), CAediting_205448(108298567, +), CAediting_205449(108298569, +), CAediting_205450(108298571, +), CAediting_205451(108298574, +), CAediting_205452(108298591, +), CAediting_205453(108298620, +), CAediting_205454(108298621, +), CAediting_205455(108298634, +), CAediting_205456(108298635, +), CAediting_205457(108298644, +), CAediting_205458(108298650, +), CAediting_205459(108298651, +), CAediting_205460(108298656, +), CAediting_205461(108298660, +), CAediting_205462(108300123, +), CAediting_205463(108300124, +), CAediting_205464(108300129, +), CAediting_205465(108300132, +), CAediting_205466(108300145, +), CAediting_205467(108300146, +), CAediting_205468(108300150, +), CAediting_205469(108300159, +), CAediting_205470(108300162, +), CAediting_205471(108300170, +), CAediting_205472(108300176, +), CAediting_205473(108300178, +), CAediting_205474(108300181, +), CAediting_205475(108300187, +), CAediting_205476(108300190, +), CAediting_205477(108300191, +), CAediting_205478(108300193, +), CAediting_205479(108300201, +), CAediting_205480(108300212, +), CAediting_205481(108300215, +), CAediting_205482(108300216, +), CAediting_205483(108300217, +), CAediting_205484(108300218, +), CAediting_205485(108300219, +), CAediting_205486(108300221, +), CAediting_205487(108300226, +), CAediting_205488(108300227, +), CAediting_205489(108300230, +), CAediting_205490(108300248, +), CAediting_205491(108300257, +), CAediting_205492(108300258, +), CAediting_205493(108300263, +), CAediting_205494(108300267, +), CAediting_205495(108300274, +), CAediting_205496(108300280, +), CAediting_205497(108300289, +), CAediting_205498(108300290, +), CAediting_205499(108300298, +), CAediting_205500(108300299, +), CAediting_205501(108300306, +), CAediting_205502(108300307, +), CAediting_205503(108300323, +), CAediting_205504(108300328, +), CAediting_205505(108300364, +), CAediting_205506(108300365, +), CAediting_205507(108301336, +), CAediting_205508(108301460, +),

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RNA editing positional annotations for SULT1C2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_205456chr2_108298635_+nonsynonymous SNVENST00000326853.8c.A346Gp.T116ADBN
CAediting_205461chr2_108298660_+nonsynonymous SNVENST00000326853.8c.A371Gp.D124GDBN

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_205378chr2_108295824_+intronic
CAediting_205379chr2_108295837_+intronic
CAediting_205380chr2_108295863_+intronic
CAediting_205381chr2_108295893_+intronic
CAediting_205382chr2_108295897_+intronic
CAediting_205383chr2_108295906_+intronic
CAediting_205384chr2_108295911_+intronic
CAediting_205385chr2_108295923_+intronic
CAediting_205386chr2_108295933_+intronic
CAediting_205387chr2_108295935_+intronic
CAediting_205388chr2_108295973_+intronic
CAediting_205389chr2_108295975_+intronic
CAediting_205390chr2_108296028_+intronic
CAediting_205391chr2_108296029_+intronic
CAediting_205392chr2_108296050_+intronic
CAediting_205393chr2_108296051_+intronic
CAediting_205394chr2_108296055_+intronic
CAediting_205395chr2_108296064_+intronic
CAediting_205396chr2_108296067_+intronic
CAediting_205397chr2_108296475_+intronic
CAediting_205398chr2_108296476_+intronic
CAediting_205399chr2_108296477_+intronic
CAediting_205400chr2_108296499_+intronic
CAediting_205401chr2_108296507_+intronic
CAediting_205402chr2_108296508_+intronic
CAediting_205403chr2_108296513_+intronic
CAediting_205404chr2_108296532_+intronic
CAediting_205405chr2_108296551_+intronic
CAediting_205406chr2_108296552_+intronic
CAediting_205407chr2_108296555_+intronic
CAediting_205408chr2_108296569_+intronic
CAediting_205409chr2_108296577_+intronic
CAediting_205410chr2_108296578_+intronic
CAediting_205411chr2_108296581_+intronic
CAediting_205412chr2_108296587_+intronic
CAediting_205413chr2_108296588_+intronic
CAediting_205414chr2_108296597_+intronic
CAediting_205415chr2_108296618_+intronic
CAediting_205416chr2_108296627_+intronic
CAediting_205417chr2_108296633_+intronic
CAediting_205418chr2_108296636_+intronic
CAediting_205419chr2_108296642_+intronic
CAediting_205420chr2_108296653_+intronic
CAediting_205421chr2_108296662_+intronic
CAediting_205422chr2_108296675_+intronic
CAediting_205423chr2_108296682_+intronic
CAediting_205424chr2_108296687_+intronic
CAediting_205425chr2_108296690_+intronic
CAediting_205426chr2_108296712_+intronic
CAediting_205427chr2_108296713_+intronic
CAediting_205428chr2_108296720_+intronic
CAediting_205429chr2_108296727_+intronic
CAediting_205430chr2_108298393_+intronic
CAediting_205431chr2_108298397_+intronic
CAediting_205432chr2_108298405_+intronic
CAediting_205433chr2_108298422_+intronic
CAediting_205434chr2_108298432_+intronic
CAediting_205435chr2_108298437_+intronic
CAediting_205436chr2_108298438_+intronic
CAediting_205437chr2_108298443_+intronic
CAediting_205438chr2_108298448_+intronic
CAediting_205439chr2_108298468_+intronic
CAediting_205440chr2_108298473_+intronic
CAediting_205441chr2_108298474_+intronic
CAediting_205442chr2_108298478_+intronic
CAediting_205443chr2_108298486_+intronic
CAediting_205444chr2_108298491_+intronic
CAediting_205445chr2_108298500_+intronic
CAediting_205446chr2_108298519_+intronic
CAediting_205447chr2_108298565_+splicing
CAediting_205448chr2_108298567_+exonic
CAediting_205449chr2_108298569_+exonic
CAediting_205450chr2_108298571_+exonic
CAediting_205451chr2_108298574_+exonic
CAediting_205452chr2_108298591_+exonic
CAediting_205453chr2_108298620_+exonic
CAediting_205454chr2_108298621_+exonic
CAediting_205455chr2_108298634_+exonic
CAediting_205456chr2_108298635_+exonic
CAediting_205457chr2_108298644_+exonic
CAediting_205458chr2_108298650_+exonic
CAediting_205459chr2_108298651_+exonic
CAediting_205460chr2_108298656_+exonic
CAediting_205461chr2_108298660_+exonic
CAediting_205462chr2_108300123_+ncRNA_exonic
CAediting_205463chr2_108300124_+ncRNA_exonic
CAediting_205464chr2_108300129_+ncRNA_exonic
CAediting_205465chr2_108300132_+ncRNA_exonic
CAediting_205466chr2_108300145_+ncRNA_exonic
CAediting_205467chr2_108300146_+ncRNA_exonic
CAediting_205468chr2_108300150_+ncRNA_exonic
CAediting_205469chr2_108300159_+ncRNA_exonic
CAediting_205470chr2_108300162_+ncRNA_exonic
CAediting_205471chr2_108300170_+ncRNA_exonic
CAediting_205472chr2_108300176_+ncRNA_exonic
CAediting_205473chr2_108300178_+ncRNA_exonic
CAediting_205474chr2_108300181_+ncRNA_exonic
CAediting_205475chr2_108300187_+ncRNA_exonic
CAediting_205476chr2_108300190_+ncRNA_exonic
CAediting_205477chr2_108300191_+ncRNA_exonic
CAediting_205478chr2_108300193_+ncRNA_exonic
CAediting_205479chr2_108300201_+ncRNA_exonic
CAediting_205480chr2_108300212_+ncRNA_exonic
CAediting_205481chr2_108300215_+ncRNA_exonic
CAediting_205482chr2_108300216_+ncRNA_exonic
CAediting_205483chr2_108300217_+ncRNA_exonic
CAediting_205484chr2_108300218_+ncRNA_exonic
CAediting_205485chr2_108300219_+ncRNA_exonic
CAediting_205486chr2_108300221_+ncRNA_exonic
CAediting_205487chr2_108300226_+ncRNA_exonic
CAediting_205488chr2_108300227_+ncRNA_exonic
CAediting_205489chr2_108300230_+ncRNA_exonic
CAediting_205490chr2_108300248_+ncRNA_exonic
CAediting_205491chr2_108300257_+ncRNA_exonic
CAediting_205492chr2_108300258_+ncRNA_exonic
CAediting_205493chr2_108300263_+ncRNA_exonic
CAediting_205494chr2_108300267_+ncRNA_exonic
CAediting_205495chr2_108300274_+ncRNA_exonic
CAediting_205496chr2_108300280_+ncRNA_exonic
CAediting_205497chr2_108300289_+ncRNA_exonic
CAediting_205498chr2_108300290_+ncRNA_exonic
CAediting_205499chr2_108300298_+ncRNA_exonic
CAediting_205500chr2_108300299_+ncRNA_exonic
CAediting_205501chr2_108300306_+ncRNA_exonic
CAediting_205502chr2_108300307_+ncRNA_exonic
CAediting_205503chr2_108300323_+ncRNA_exonic
CAediting_205504chr2_108300328_+ncRNA_exonic
CAediting_205505chr2_108300364_+ncRNA_exonic
CAediting_205506chr2_108300365_+ncRNA_exonic
CAediting_205507chr2_108301336_+ncRNA_exonic
CAediting_205508chr2_108301460_+ncRNA_exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_205378chr2_108295824_+SINEAluAluJr
CAediting_205379chr2_108295837_+SINEAluAluJr
CAediting_205380chr2_108295863_+SINEAluAluJr
CAediting_205381chr2_108295893_+SINEAluAluJr
CAediting_205382chr2_108295897_+SINEAluAluJr
CAediting_205383chr2_108295906_+SINEAluAluJr
CAediting_205384chr2_108295911_+SINEAluAluJr
CAediting_205385chr2_108295923_+SINEAluAluJr
CAediting_205386chr2_108295933_+SINEAluAluJr
CAediting_205387chr2_108295935_+SINEAluAluJr
CAediting_205388chr2_108295973_+SINEAluAluJr
CAediting_205389chr2_108295975_+SINEAluAluJr
CAediting_205390chr2_108296028_+SINEAluAluJr
CAediting_205391chr2_108296029_+SINEAluAluJr
CAediting_205392chr2_108296050_+SINEAluAluJr
CAediting_205393chr2_108296051_+SINEAluAluJr
CAediting_205394chr2_108296055_+SINEAluAluJr
CAediting_205395chr2_108296064_+SINEAluAluJr
CAediting_205396chr2_108296067_+SINEAluAluJr
CAediting_205397chr2_108296475_+SINEAluAluSx1
CAediting_205398chr2_108296476_+SINEAluAluSx1
CAediting_205399chr2_108296477_+SINEAluAluSx1
CAediting_205400chr2_108296499_+SINEAluAluSx1
CAediting_205401chr2_108296507_+SINEAluAluSx1
CAediting_205402chr2_108296508_+SINEAluAluSx1
CAediting_205403chr2_108296513_+SINEAluAluSx1
CAediting_205404chr2_108296532_+SINEAluAluSx1
CAediting_205405chr2_108296551_+SINEAluAluSx1
CAediting_205406chr2_108296552_+SINEAluAluSx1
CAediting_205407chr2_108296555_+SINEAluAluSx1
CAediting_205408chr2_108296569_+SINEAluAluSx1
CAediting_205409chr2_108296577_+SINEAluAluSx1
CAediting_205410chr2_108296578_+SINEAluAluSx1
CAediting_205411chr2_108296581_+SINEAluAluSx1
CAediting_205412chr2_108296587_+SINEAluAluSx1
CAediting_205413chr2_108296588_+SINEAluAluSx1
CAediting_205414chr2_108296597_+SINEAluAluSx1
CAediting_205415chr2_108296618_+SINEAluAluSx1
CAediting_205416chr2_108296627_+SINEAluAluSx1
CAediting_205417chr2_108296633_+SINEAluAluSx1
CAediting_205418chr2_108296636_+SINEAluAluSx1
CAediting_205419chr2_108296642_+SINEAluAluSx1
CAediting_205420chr2_108296653_+SINEAluAluSx1
CAediting_205421chr2_108296662_+SINEAluAluSx1
CAediting_205422chr2_108296675_+SINEAluAluSx1
CAediting_205423chr2_108296682_+SINEAluAluSx1
CAediting_205424chr2_108296687_+SINEAluAluSx1
CAediting_205425chr2_108296690_+SINEAluAluSx1
CAediting_205426chr2_108296712_+SINEAluAluSx1
CAediting_205427chr2_108296713_+SINEAluAluSx1
CAediting_205428chr2_108296720_+SINEAluAluSx1
CAediting_205429chr2_108296727_+SINEAluAluSx1
CAediting_205430chr2_108298393_+SINEAluAluJb
CAediting_205431chr2_108298397_+SINEAluAluJb
CAediting_205432chr2_108298405_+SINEAluAluJb
CAediting_205433chr2_108298422_+SINEAluAluJb
CAediting_205434chr2_108298432_+SINEAluAluJb
CAediting_205435chr2_108298437_+SINEAluAluJb
CAediting_205436chr2_108298438_+SINEAluAluJb
CAediting_205437chr2_108298443_+SINEAluAluJb
CAediting_205438chr2_108298448_+SINEAluAluJb
CAediting_205439chr2_108298468_+SINEAluAluJb
CAediting_205440chr2_108298473_+SINEAluAluJb
CAediting_205441chr2_108298474_+SINEAluAluJb
CAediting_205442chr2_108298478_+SINEAluAluJb
CAediting_205443chr2_108298486_+SINEAluAluJb
CAediting_205444chr2_108298491_+SINEAluAluJb
CAediting_205445chr2_108298500_+SINEAluAluJb
CAediting_205446chr2_108298519_+SINEAluAluJb
CAediting_205447chr2_108298565_+SINEAluAluJb
CAediting_205448chr2_108298567_+SINEAluAluJb
CAediting_205449chr2_108298569_+SINEAluAluJb
CAediting_205450chr2_108298571_+SINEAluAluJb
CAediting_205451chr2_108298574_+SINEAluAluJb
CAediting_205452chr2_108298591_+SINEAluAluJb
CAediting_205453chr2_108298620_+SINEAluAluJb
CAediting_205454chr2_108298621_+SINEAluAluJb
CAediting_205455chr2_108298634_+SINEAluAluJb
CAediting_205456chr2_108298635_+SINEAluAluJb
CAediting_205457chr2_108298644_+SINEAluAluJb
CAediting_205458chr2_108298650_+SINEAluAluJb
CAediting_205459chr2_108298651_+SINEAluAluJb
CAediting_205460chr2_108298656_+SINEAluAluJb
CAediting_205461chr2_108298660_+SINEAluAluJb
CAediting_205462chr2_108300123_+SINEAluAluSc
CAediting_205463chr2_108300124_+SINEAluAluSc
CAediting_205464chr2_108300129_+SINEAluAluSc
CAediting_205465chr2_108300132_+SINEAluAluSc
CAediting_205466chr2_108300145_+SINEAluAluSc
CAediting_205467chr2_108300146_+SINEAluAluSc
CAediting_205468chr2_108300150_+SINEAluAluSc
CAediting_205469chr2_108300159_+SINEAluAluSc
CAediting_205470chr2_108300162_+SINEAluAluSc
CAediting_205471chr2_108300170_+SINEAluAluSc
CAediting_205472chr2_108300176_+SINEAluAluSc
CAediting_205473chr2_108300178_+SINEAluAluSc
CAediting_205474chr2_108300181_+SINEAluAluSc
CAediting_205475chr2_108300187_+SINEAluAluSc
CAediting_205476chr2_108300190_+SINEAluAluSc
CAediting_205477chr2_108300191_+SINEAluAluSc
CAediting_205478chr2_108300193_+SINEAluAluSc
CAediting_205479chr2_108300201_+SINEAluAluSc
CAediting_205480chr2_108300212_+SINEAluAluSc
CAediting_205481chr2_108300215_+SINEAluAluSc
CAediting_205482chr2_108300216_+SINEAluAluSc
CAediting_205483chr2_108300217_+SINEAluAluSc
CAediting_205484chr2_108300218_+SINEAluAluSc
CAediting_205485chr2_108300219_+SINEAluAluSc
CAediting_205486chr2_108300221_+SINEAluAluSc
CAediting_205487chr2_108300226_+SINEAluAluSc
CAediting_205488chr2_108300227_+SINEAluAluSc
CAediting_205489chr2_108300230_+SINEAluAluSc
CAediting_205490chr2_108300248_+SINEAluAluSc
CAediting_205491chr2_108300257_+SINEAluAluSc
CAediting_205492chr2_108300258_+SINEAluAluSc
CAediting_205493chr2_108300263_+SINEAluAluSc
CAediting_205494chr2_108300267_+SINEAluAluSc
CAediting_205495chr2_108300274_+SINEAluAluSc
CAediting_205496chr2_108300280_+SINEAluAluSc
CAediting_205497chr2_108300289_+SINEAluAluSc
CAediting_205498chr2_108300290_+SINEAluAluSc
CAediting_205499chr2_108300298_+SINEAluAluSc
CAediting_205500chr2_108300299_+SINEAluAluSc
CAediting_205501chr2_108300306_+SINEAluAluSc
CAediting_205502chr2_108300307_+SINEAluAluSc
CAediting_205503chr2_108300323_+SINEAluAluSc
CAediting_205504chr2_108300328_+SINEAluAluSc
CAediting_205505chr2_108300364_+SINEAluAluSc
CAediting_205506chr2_108300365_+SINEAluAluSc
CAediting_205507chr2_108301336_+SINEAluAluYc
CAediting_205508chr2_108301460_+SINEAluAluYc

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RNA A-to-I editing events in the alternative splicing sites for SULT1C2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_205447chr2_108298565_+108298546:1082985683SS0+1iTTTGGTATTTTTTTTTTTTAGAG-7.82TTTGGTATTTTTTTTTTTTGGAG0.93
IRCAediting_205447chr2_108298565_+108298546:1082985683SS0+1iTTTGGTATTTTTTTTTTTTAGAG-7.82TTTGGTATTTTTTTTTTTTGGAG0.93
ESCAediting_205448chr2_108298567_+108298546:1082985683SS2+0iTTTGGTATTTTTTTTTTTTAGAG-7.82TTTGGTATTTTTTTTTTTTAGGG-7.69
IRCAediting_205448chr2_108298567_+108298546:1082985683SS2+0iTTTGGTATTTTTTTTTTTTAGAG-7.82TTTGGTATTTTTTTTTTTTAGGG-7.69
ESCAediting_205461chr2_108298660_+108298659:1082986675SS2+0iGACGTGAGC5.28GGCGTGAGC2.44
IRCAediting_205461chr2_108298660_+108298659:1082986675SS2+0iGACGTGAGC5.28GGCGTGAGC2.44

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000198203.8.SULT1C2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000198203.8.SULT1C2.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SULT1C2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
KIRP.CAediting_205439.ENSG00000198203.SULT1C2.png
Soverview

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Protein coding region RNA A-to-I editings for SULT1C2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for SULT1C2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000198203.8ENST00000326853hsa-miR-605-3p1083089771083089848mer-1a108308962108308984154-18.15
CAediting_748296chr10_51299626_+ENSG00000198203.8ENST00000251481hsa-miR-605-3p1083089771083089848mer-1a108308962108308984154-18.15
CAediting_1229414chr17_67471546_+ENSG00000198203.8ENST00000326853hsa-miR-548aa1083096651083096728mer-1a108309648108309672140-12.78
CAediting_228905chr2_188297554_+ENSG00000198203.8ENST00000326853hsa-miR-561-3p1083097911083097977mer-m8108309777108309798140-7.61
CAediting_1229414chr17_67471546_+ENSG00000198203.8ENST00000251481hsa-miR-548aa1083096651083096728mer-1a108309648108309672140-12.78
CAediting_228905chr2_188297554_+ENSG00000198203.8ENST00000251481hsa-miR-561-3p1083097911083097977mer-m8108309777108309798140-7.61

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_228905chr2_188297554_+ENSG00000198203.8ENST00000326853hsa-miR-561-3p1083094841083094896mer108309469108309490151-15.38
CAediting_228905chr2_188297554_+ENSG00000198203.8ENST00000251481hsa-miR-561-3p1083094841083094896mer108309469108309490151-15.38

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SULT1C2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000326853.8protein_codingSoverviewSoverview
ENST00000495441.1retained_intronSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_205448ENST00000326853.8chr2_108298567_+-818.60-813.70-839.10
CAediting_205449ENST00000326853.8chr2_108298569_+-820.20-813.70-839.10
CAediting_205450ENST00000326853.8chr2_108298571_+-814.80-813.70-839.10
CAediting_205451ENST00000326853.8chr2_108298574_+-817.50-813.70-839.10
CAediting_205452ENST00000326853.8chr2_108298591_+-814.10-813.70-839.10
CAediting_205453ENST00000326853.8chr2_108298620_+-813.80-813.70-839.10
CAediting_205454ENST00000326853.8chr2_108298621_+-815.40-813.70-839.10
CAediting_205455ENST00000326853.8chr2_108298634_+-813.40-813.70-839.10
CAediting_205456ENST00000326853.8chr2_108298635_+-815.10-813.70-839.10
CAediting_205457ENST00000326853.8chr2_108298644_+-818.30-813.70-839.10
CAediting_205458ENST00000326853.8chr2_108298650_+-816.30-813.70-839.10
CAediting_205459ENST00000326853.8chr2_108298651_+-820.10-813.70-839.10
CAediting_205460ENST00000326853.8chr2_108298656_+-816.80-813.70-839.10
CAediting_205461ENST00000326853.8chr2_108298660_+-816.80-813.70-839.10
CAediting_205462ENST00000495441.1chr2_108300123_+-2001.78-1998.28-2048.28
CAediting_205463ENST00000495441.1chr2_108300124_+-1998.28-1998.28-2048.28
CAediting_205464ENST00000495441.1chr2_108300129_+-1997.48-1998.28-2048.28
CAediting_205465ENST00000495441.1chr2_108300132_+-1999.48-1998.28-2048.28
CAediting_205466ENST00000495441.1chr2_108300145_+-1998.28-1998.28-2048.28
CAediting_205467ENST00000495441.1chr2_108300146_+-1998.28-1998.28-2048.28
CAediting_205468ENST00000495441.1chr2_108300150_+-1997.28-1998.28-2048.28
CAediting_205469ENST00000495441.1chr2_108300159_+-1999.08-1998.28-2048.28
CAediting_205470ENST00000495441.1chr2_108300162_+-1998.18-1998.28-2048.28
CAediting_205471ENST00000495441.1chr2_108300170_+-1998.18-1998.28-2048.28
CAediting_205472ENST00000495441.1chr2_108300176_+-1998.98-1998.28-2048.28
CAediting_205473ENST00000495441.1chr2_108300178_+-2001.38-1998.28-2048.28
CAediting_205474ENST00000495441.1chr2_108300181_+-1998.28-1998.28-2048.28
CAediting_205475ENST00000495441.1chr2_108300187_+-1999.48-1998.28-2048.28
CAediting_205476ENST00000495441.1chr2_108300190_+-1998.28-1998.28-2048.28
CAediting_205477ENST00000495441.1chr2_108300191_+-1998.28-1998.28-2048.28
CAediting_205478ENST00000495441.1chr2_108300193_+-1998.28-1998.28-2048.28
CAediting_205479ENST00000495441.1chr2_108300201_+-1997.88-1998.28-2048.28
CAediting_205480ENST00000495441.1chr2_108300212_+-2002.28-1998.28-2048.28
CAediting_205481ENST00000495441.1chr2_108300215_+-1998.28-1998.28-2048.28
CAediting_205482ENST00000495441.1chr2_108300216_+-1999.18-1998.28-2048.28
CAediting_205483ENST00000495441.1chr2_108300217_+-1999.08-1998.28-2048.28
CAediting_205484ENST00000495441.1chr2_108300218_+-1998.28-1998.28-2048.28
CAediting_205485ENST00000495441.1chr2_108300219_+-1999.28-1998.28-2048.28
CAediting_205486ENST00000495441.1chr2_108300221_+-1998.18-1998.28-2048.28
CAediting_205487ENST00000495441.1chr2_108300226_+-1998.28-1998.28-2048.28
CAediting_205488ENST00000495441.1chr2_108300227_+-1998.28-1998.28-2048.28
CAediting_205489ENST00000495441.1chr2_108300230_+-1998.28-1998.28-2048.28
CAediting_205490ENST00000495441.1chr2_108300248_+-1998.28-1998.28-2048.28
CAediting_205491ENST00000495441.1chr2_108300257_+-1998.28-1998.28-2048.28
CAediting_205492ENST00000495441.1chr2_108300258_+-1998.28-1998.28-2048.28
CAediting_205493ENST00000495441.1chr2_108300263_+-2000.78-1998.28-2048.28
CAediting_205494ENST00000495441.1chr2_108300267_+-1998.28-1998.28-2048.28
CAediting_205495ENST00000495441.1chr2_108300274_+-1997.98-1998.28-2048.28
CAediting_205496ENST00000495441.1chr2_108300280_+-1997.88-1998.28-2048.28
CAediting_205497ENST00000495441.1chr2_108300289_+-1999.28-1998.28-2048.28
CAediting_205498ENST00000495441.1chr2_108300290_+-1998.28-1998.28-2048.28
CAediting_205499ENST00000495441.1chr2_108300298_+-2005.18-1998.28-2048.28
CAediting_205500ENST00000495441.1chr2_108300299_+-2001.98-1998.28-2048.28
CAediting_205501ENST00000495441.1chr2_108300306_+-1998.88-1998.28-2048.28
CAediting_205502ENST00000495441.1chr2_108300307_+-2000.08-1998.28-2048.28
CAediting_205503ENST00000495441.1chr2_108300323_+-2003.78-1998.28-2048.28
CAediting_205504ENST00000495441.1chr2_108300328_+-2001.88-1998.28-2048.28
CAediting_205505ENST00000495441.1chr2_108300364_+-1998.28-1998.28-2048.28
CAediting_205506ENST00000495441.1chr2_108300365_+-2003.28-1998.28-2048.28
CAediting_205507ENST00000495441.1chr2_108301336_+-1998.38-1998.28-2048.28
CAediting_205508ENST00000495441.1chr2_108301460_+-2002.68-1998.28-2048.28

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Relation with ADAR for SULT1C2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
KICHCAediting_205383chr2_108295906_+0.002093098325215380.40614864376573....
STADCAediting_205424chr2_108296687_+0.03246317636508990.2379034817893370.01063631722350420.282411676317377..
KIRPCAediting_205440chr2_108298473_+....0.007525426003470190.319119941219106
KIRCCAediting_205450chr2_108298571_+....0.0211175920890750.172265593530264
KICHCAediting_205462chr2_108300123_+8.19170108582095e-060.575176725386362..0.01348806659190480.340580806734232
THCACAediting_205462chr2_108300123_+0.01621832321762070.314448733066846....
KIRPCAediting_205462chr2_108300123_+0.01471968791715490.208016282369092....
KICHCAediting_205463chr2_108300124_+0.01483105289318290.324058121211369....
THCACAediting_205463chr2_108300124_+0.01294098908868630.295709263279343..0.04983273377780470.235364941569154
KIRPCAediting_205468chr2_108300150_+..0.0001455542539830810.341298043243152..
STADCAediting_205500chr2_108300299_+0.003139811405102620.268606783998935....

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Relation with cancer stages for SULT1C2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
KICHpathologic_stageCAediting_205462chr2_108300123_+0.008982470599271060.358885341608226
KICHpathologic_stageCAediting_205500chr2_108300299_+0.0174170339348737-0.334963675516887
KIRCpathologic_stageCAediting_205431chr2_108298397_+0.04922814995742030.156731311048177
KIRCpathologic_stageCAediting_205462chr2_108300123_+7.3481019488531e-050.260603066668989
KIRPclinical_stageCAediting_205490chr2_108300248_+0.0008737915196165760.53050558603114
KIRPpathologic_stageCAediting_205462chr2_108300123_+0.01608355759704440.219342338492134
KIRPpathologic_stageCAediting_205477chr2_108300191_+0.004798036778581040.359406406783377
KIRPpathologic_stageCAediting_205490chr2_108300248_+0.02185611286354680.33378076124653
STADpathologic_stageCAediting_205384chr2_108295911_+0.021480237661490.228609075149776

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Relation with survival for SULT1C2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for SULT1C2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SULT1C2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource