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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: STAT1 (CAeditome ID:6772) |
Gene summary for STAT1 |
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Gene information | Gene symbol | STAT1 | Gene ID | 6772 |
Gene name | signal transducer and activator of transcription 1 | |
Synonyms | CANDF7|IMD31A|IMD31B|IMD31C|ISGF-3|STAT91 | |
Cytomap | 2q32.2 | |
Type of gene | protein-coding | |
Description | signal transducer and activator of transcription 1-alpha/betasignal transducer and activator of transcription 1, 91kDsignal transducer and activator of transcription 1, 91kDatranscription factor ISGF-3 components p91/p84 | |
Modification date | 20210531 | |
UniProtAcc | P42224 | |
Context | - 32867271(ADAR1 Suppresses Interferon Signaling in Gastric Cancer Cells by MicroRNA-302a-Mediated IRF9/STAT1 Regulation.) |
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Gene | GO ID | GO term | PubMed ID |
STAT1 | GO:0005634 | Signal transducer and activator of transcription 1-alpha/beta | 26479788 |
STAT1 | GO:0000978 | Signal transducer and activator of transcription 1-alpha/beta | 18035482 |
STAT1 | GO:0000978 | Signal transducer and activator of transcription 1-alpha/beta | 21268089 |
STAT1 | GO:0000979 | Signal transducer and activator of transcription 1-alpha/beta | 23386060 |
STAT1 | GO:0000979 | Signal transducer and activator of transcription 1-alpha/beta | 28753426 |
STAT1 | GO:0000981 | Signal transducer and activator of transcription 1-alpha/beta | 21268089 |
STAT1 | GO:0003690 | Signal transducer and activator of transcription 1-alpha/beta | 9630226 |
STAT1 | GO:0003700 | Signal transducer and activator of transcription 1-alpha/beta | 10973496 |
STAT1 | GO:0003700 | Signal transducer and activator of transcription 1-alpha/beta | 23386060 |
STAT1 | GO:0042803 | Signal transducer and activator of transcription 1-alpha/beta | 28753426 |
STAT1 | GO:0042803 | Signal transducer and activator of transcription 1-alpha/beta | 9630226 |
STAT1 | GO:1990841 | Signal transducer and activator of transcription 1-alpha/beta | 26479788 |
STAT1 | GO:0007259 | Signal transducer and activator of transcription 1-alpha/beta | 22002246 |
STAT1 | GO:0010742 | Signal transducer and activator of transcription 1-alpha/beta | 26504087 |
STAT1 | GO:0032727 | Signal transducer and activator of transcription 1-alpha/beta | 28753426 |
STAT1 | GO:0033209 | Signal transducer and activator of transcription 1-alpha/beta | 10848577 |
STAT1 | GO:0045893 | Signal transducer and activator of transcription 1-alpha/beta | 10973496 |
STAT1 | GO:0051607 | Signal transducer and activator of transcription 1-alpha/beta | 28753426 |
STAT1 | GO:0060333 | Signal transducer and activator of transcription 1-alpha/beta | 21268089 |
STAT1 | GO:0060337 | Signal transducer and activator of transcription 1-alpha/beta | 23386060 |
STAT1 | GO:0070106 | Signal transducer and activator of transcription 1-alpha/beta | 32270034 |
STAT1 | GO:0071346 | Signal transducer and activator of transcription 1-alpha/beta | 23386060 |
STAT1 | GO:0000785 | Signal transducer and activator of transcription 1-alpha/beta | 18035482 |
STAT1 | GO:0005634 | Signal transducer and activator of transcription 1-alpha/beta | 10692450 |
STAT1 | GO:0005634 | Signal transducer and activator of transcription 1-alpha/beta | 10973496 |
STAT1 | GO:0005634 | Signal transducer and activator of transcription 1-alpha/beta | 15825084 |
STAT1 | GO:0005634 | Signal transducer and activator of transcription 1-alpha/beta | 16306601 |
STAT1 | GO:0005634 | Signal transducer and activator of transcription 1-alpha/beta | 21268089 |
STAT1 | GO:0005634 | Signal transducer and activator of transcription 1-alpha/beta | 23386060 |
STAT1 | GO:0005634 | Signal transducer and activator of transcription 1-alpha/beta | 28753426 |
STAT1 | GO:0005654 | Signal transducer and activator of transcription 1-alpha/beta | 0000052 |
STAT1 | GO:0005730 | Signal transducer and activator of transcription 1-alpha/beta | 0000052 |
STAT1 | GO:0005737 | Signal transducer and activator of transcription 1-alpha/beta | 10692450 |
STAT1 | GO:0005737 | Signal transducer and activator of transcription 1-alpha/beta | 10973496 |
STAT1 | GO:0005737 | Signal transducer and activator of transcription 1-alpha/beta | 15825084 |
STAT1 | GO:0005737 | Signal transducer and activator of transcription 1-alpha/beta | 17275127 |
STAT1 | GO:0005737 | Signal transducer and activator of transcription 1-alpha/beta | 23386060 |
STAT1 | GO:0005737 | Signal transducer and activator of transcription 1-alpha/beta | 26479788 |
STAT1 | GO:0005737 | Signal transducer and activator of transcription 1-alpha/beta | 27796300 |
STAT1 | GO:0005737 | Signal transducer and activator of transcription 1-alpha/beta | 28753426 |
STAT1 | GO:0005829 | Signal transducer and activator of transcription 1-alpha/beta | 0000052 |
STAT1 | GO:0048471 | Signal transducer and activator of transcription 1-alpha/beta | 17275127 |
STAT1 | GO:0032991 | Signal transducer and activator of transcription 1-alpha/beta | 26479788 |
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RNA A-to-I events for STAT1 |
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CAediting_229680(190971700, -), CAediting_229681(190971701, -), CAediting_229682(190971704, -), CAediting_229683(190971709, -), CAediting_229684(190971710, -), CAediting_229685(190971711, -), CAediting_229686(190971781, -), CAediting_229687(190971828, -), CAediting_229688(190992608, -), CAediting_229689(190992882, -), CAediting_229690(190992901, -), CAediting_229691(190992918, -), CAediting_229692(191011452, -), CAediting_229693(191011516, -), CAediting_229694(191011527, -), CAediting_229695(191011551, -), CAediting_229696(191011557, -), CAediting_229697(191011950, -), CAediting_229698(191011983, -), CAediting_229699(191012023, -), CAediting_229700(191012196, -), CAediting_229701(191012221, -), CAediting_229702(191012286, -), CAediting_229703(191012294, -), CAediting_229704(191012316, -), CAediting_229705(191012329, -), CAediting_229706(191012354, -), CAediting_229707(191012390, -), CAediting_229708(191012408, -), |
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RNA editing positional annotations for STAT1 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_229680 | chr2_190971700_- | intronic |
CAediting_229681 | chr2_190971701_- | intronic |
CAediting_229682 | chr2_190971704_- | intronic |
CAediting_229683 | chr2_190971709_- | intronic |
CAediting_229684 | chr2_190971710_- | intronic |
CAediting_229685 | chr2_190971711_- | intronic |
CAediting_229686 | chr2_190971781_- | intronic |
CAediting_229687 | chr2_190971828_- | intronic |
CAediting_229688 | chr2_190992608_- | intronic |
CAediting_229689 | chr2_190992882_- | ncRNA_intronic |
CAediting_229690 | chr2_190992901_- | ncRNA_intronic |
CAediting_229691 | chr2_190992918_- | ncRNA_intronic |
CAediting_229692 | chr2_191011452_- | intronic |
CAediting_229693 | chr2_191011516_- | intronic |
CAediting_229694 | chr2_191011527_- | intronic |
CAediting_229695 | chr2_191011551_- | intronic |
CAediting_229696 | chr2_191011557_- | intronic |
CAediting_229697 | chr2_191011950_- | intronic |
CAediting_229698 | chr2_191011983_- | intronic |
CAediting_229699 | chr2_191012023_- | intronic |
CAediting_229700 | chr2_191012196_- | intronic |
CAediting_229701 | chr2_191012221_- | intronic |
CAediting_229702 | chr2_191012286_- | intronic |
CAediting_229703 | chr2_191012294_- | intronic |
CAediting_229704 | chr2_191012316_- | intronic |
CAediting_229705 | chr2_191012329_- | intronic |
CAediting_229706 | chr2_191012354_- | intronic |
CAediting_229707 | chr2_191012390_- | intronic |
CAediting_229708 | chr2_191012408_- | intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_229680 | chr2_190971700_- | SINE | Alu | AluSx |
CAediting_229681 | chr2_190971701_- | SINE | Alu | AluSx |
CAediting_229682 | chr2_190971704_- | SINE | Alu | AluSx |
CAediting_229683 | chr2_190971709_- | SINE | Alu | AluSx |
CAediting_229684 | chr2_190971710_- | SINE | Alu | AluSx |
CAediting_229685 | chr2_190971711_- | SINE | Alu | AluSx |
CAediting_229686 | chr2_190971781_- | SINE | Alu | AluSx |
CAediting_229687 | chr2_190971828_- | SINE | Alu | AluSx |
CAediting_229689 | chr2_190992882_- | SINE | Alu | AluSx1 |
CAediting_229690 | chr2_190992901_- | SINE | Alu | AluSx1 |
CAediting_229691 | chr2_190992918_- | SINE | Alu | AluSx1 |
CAediting_229692 | chr2_191011452_- | SINE | Alu | AluJr |
CAediting_229693 | chr2_191011516_- | SINE | Alu | AluJr |
CAediting_229694 | chr2_191011527_- | SINE | Alu | AluJr |
CAediting_229695 | chr2_191011551_- | SINE | Alu | AluJr |
CAediting_229696 | chr2_191011557_- | SINE | Alu | AluJr |
CAediting_229697 | chr2_191011950_- | SINE | Alu | AluJr |
CAediting_229698 | chr2_191011983_- | SINE | Alu | AluJr |
CAediting_229699 | chr2_191012023_- | SINE | Alu | AluJr |
CAediting_229700 | chr2_191012196_- | SINE | Alu | AluSx |
CAediting_229701 | chr2_191012221_- | SINE | Alu | AluSx |
CAediting_229702 | chr2_191012286_- | SINE | Alu | AluSx |
CAediting_229703 | chr2_191012294_- | SINE | Alu | AluSx |
CAediting_229704 | chr2_191012316_- | SINE | Alu | AluSx |
CAediting_229705 | chr2_191012329_- | SINE | Alu | AluSx |
CAediting_229706 | chr2_191012354_- | SINE | Alu | AluSx |
CAediting_229707 | chr2_191012390_- | SINE | Alu | AluSx |
CAediting_229708 | chr2_191012408_- | SINE | Alu | AluSx |
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RNA A-to-I editing events in the alternative splicing sites for STAT1 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for STAT1 |
![]() * The grey color means N/A. |
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STAD.CAediting_229684.ENSG00000115415.STAT1.png ![]() |
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Protein coding region RNA A-to-I editings for STAT1 |
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The effects of the RNA editing to the miRNA binding sites for STAT1 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_393 | chr1_1167164_+ | ENSG00000115415.17 | ENST00000392322 | hsa-miR-200b-3p | 190975652 | 190975658 | 7mer-m8 | 190975651 | 190975672 | 156 | -14.95 |
CAediting_393 | chr1_1167164_+ | ENSG00000115415.17 | ENST00000392323 | hsa-miR-200b-3p | 190975652 | 190975658 | 7mer-m8 | 190975651 | 190975672 | 156 | -14.95 |
CAediting_77128 | chr1_85133844_+ | ENSG00000115415.17 | ENST00000409465 | hsa-miR-4423-3p | 190970348 | 190970355 | 8mer-1a | 190970348 | 190970368 | 140 | -12.55 |
CAediting_396018 | chr5_1062918_- | ENSG00000115415.17 | ENST00000392322 | hsa-miR-4635 | 190975771 | 190975777 | 7mer-m8 | 190975770 | 190975791 | 147 | -14.36 |
CAediting_396018 | chr5_1062918_- | ENSG00000115415.17 | ENST00000392323 | hsa-miR-4635 | 190975771 | 190975777 | 7mer-m8 | 190975770 | 190975791 | 147 | -14.36 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for STAT1 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for STAT1 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
ESCA | CAediting_229680 | chr2_190971700_- | . | . | 0.00183612535910782 | 0.390982837597335 | . | . |
ESCA | CAediting_229682 | chr2_190971704_- | . | . | 0.000210484487968307 | 0.412831831256761 | . | . |
STAD | CAediting_229684 | chr2_190971710_- | 0.00628609523689507 | 0.194552514442733 | . | . | . | . |
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Relation with cancer stages for STAT1 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for STAT1 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for STAT1 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for STAT1 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
STAT1 | C3151088 | IMMUNODEFICIENCY 31B | 8 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
STAT1 | C3279990 | CANDIDIASIS, FAMILIAL, 7 | 8 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
STAT1 | C4013950 | IMMUNODEFICIENCY 31A | 5 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
STAT1 | C0003865 | Arthritis, Adjuvant-Induced | 1 | CTD_human |
STAT1 | C0003873 | Rheumatoid Arthritis | 1 | CTD_human |
STAT1 | C0006845 | Candidiasis, Chronic Mucocutaneous | 1 | CTD_human |
STAT1 | C0010823 | Cytomegalovirus Infections | 1 | CTD_human |
STAT1 | C0021400 | Influenza | 1 | CTD_human |
STAT1 | C0023890 | Liver Cirrhosis | 1 | CTD_human |
STAT1 | C0026918 | Mycobacterium Infections | 1 | CTD_human |
STAT1 | C0027627 | Neoplasm Metastasis | 1 | CTD_human |
STAT1 | C0235874 | Disease Exacerbation | 1 | CTD_human |
STAT1 | C0239946 | Fibrosis, Liver | 1 | CTD_human |
STAT1 | C0494261 | Combined immunodeficiency | 1 | GENOMICS_ENGLAND |
STAT1 | C0971858 | Arthritis, Collagen-Induced | 1 | CTD_human |
STAT1 | C0993582 | Arthritis, Experimental | 1 | CTD_human |
STAT1 | C1384666 | hearing impairment | 1 | CTD_human |
STAT1 | C1961099 | Precursor T-Cell Lymphoblastic Leukemia-Lymphoma | 1 | CTD_human |
STAT1 | C2239176 | Liver carcinoma | 1 | CTD_human |