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Editing gene: SRP9 (CAeditome ID:6726)

Gene summary for SRP9

Gene summary

Gene information	Gene symbol	SRP9
	Gene ID	6726
	Gene name	signal recognition particle 9
	Synonyms	ALURBP
	Cytomap	1q42.12
	Type of gene	protein-coding
	Description	signal recognition particle 9 kDa proteinsignal recognition particle 9kDsignal recognition particle 9kDa
	Modification date	20210518
	UniProtAcc	P49458
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for SRP9

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000143742.11

RNA A-to-I editing events in Cancer.

CAediting_142881(225780126, +), CAediting_142882(225784386, +), CAediting_142883(225784388, +), CAediting_142884(225784434, +), CAediting_142885(225784448, +), CAediting_142886(225784451, +), CAediting_142887(225784466, +), CAediting_142888(225784509, +), CAediting_142889(225784510, +), CAediting_142890(225784511, +), CAediting_142891(225784512, +), CAediting_142892(225784523, +), CAediting_142893(225784529, +), CAediting_142894(225784604, +), CAediting_142895(225784609, +), CAediting_142896(225784617, +), CAediting_142897(225784624, +), CAediting_142898(225784625, +), CAediting_142899(225784639, +), CAediting_142900(225784654, +), CAediting_142901(225784748, +), CAediting_142902(225784761, +), CAediting_142903(225784762, +), CAediting_142904(225784770, +), CAediting_142905(225784787, +), CAediting_142906(225784790, +), CAediting_142907(225784802, +), CAediting_142908(225784829, +), CAediting_142909(225784830, +), CAediting_142910(225784837, +), CAediting_142911(225784959, +), CAediting_142912(225785027, +), CAediting_142913(225785035, +), CAediting_142914(225785071, +), CAediting_142915(225785115, +), CAediting_142916(225785157, +), CAediting_142917(225785170, +), CAediting_142918(225785188, +), CAediting_142919(225785197, +), CAediting_142920(225785200, +), CAediting_142921(225785261, +), CAediting_142922(225785313, +), CAediting_142923(225785320, +), CAediting_142924(225785339, +), CAediting_142925(225785351, +), CAediting_142926(225785498, +), CAediting_142927(225785507, +), CAediting_142928(225785510, +), CAediting_142929(225785522, +), CAediting_142930(225785587, +), CAediting_142931(225785604, +), CAediting_142932(225785642, +), CAediting_142933(225785782, +), CAediting_142934(225785783, +), CAediting_142935(225785786, +), CAediting_142936(225785808, +), CAediting_142937(225785809, +), CAediting_142938(225785812, +), CAediting_142939(225785822, +), CAediting_142940(225785840, +), CAediting_142941(225785844, +), CAediting_142942(225785848, +), CAediting_142943(225785849, +), CAediting_142944(225785857, +), CAediting_142945(225785863, +), CAediting_142946(225785866, +), CAediting_142947(225785873, +), CAediting_142948(225785880, +), CAediting_142949(225785883, +), CAediting_142950(225785908, +), CAediting_142951(225785929, +), CAediting_142952(225785933, +), CAediting_142953(225785946, +), CAediting_142954(225785947, +), CAediting_142955(225785960, +), CAediting_142956(225785982, +), CAediting_142957(225786904, +), CAediting_142958(225786910, +), CAediting_142959(225786917, +), CAediting_142960(225786942, +), CAediting_142961(225786969, +), CAediting_142962(225786972, +), CAediting_142963(225786975, +), CAediting_142964(225786982, +), CAediting_142965(225786984, +), CAediting_142966(225787008, +), CAediting_142967(225787009, +), CAediting_142968(225787015, +), CAediting_142969(225787016, +), CAediting_142970(225787028, +), CAediting_142971(225787033, +), CAediting_142972(225787044, +), CAediting_142973(225787046, +), CAediting_142974(225787053, +), CAediting_142975(225787066, +), CAediting_142976(225787078, +), CAediting_142977(225787079, +), CAediting_142978(225787104, +), CAediting_142979(225787105, +), CAediting_142980(225787106, +), CAediting_142981(225787109, +), CAediting_142982(225787118, +), CAediting_142983(225787127, +), CAediting_142984(225787128, +), CAediting_142985(225787160, +), CAediting_142986(225787279, +), CAediting_142987(225787280, +), CAediting_142988(225787285, +), CAediting_142989(225787288, +), CAediting_142990(225787302, +), CAediting_142991(225787318, +), CAediting_142992(225787323, +), CAediting_142993(225787326, +), CAediting_142994(225787332, +), CAediting_142995(225787337, +), CAediting_142996(225787343, +), CAediting_142997(225787347, +), CAediting_142998(225787349, +), CAediting_142999(225787351, +), CAediting_143000(225787355, +), CAediting_143001(225787356, +), CAediting_143002(225787368, +), CAediting_143003(225787371, +), CAediting_143004(225787373, +), CAediting_143005(225787374, +), CAediting_143006(225787377, +), CAediting_143007(225787379, +), CAediting_143008(225787380, +), CAediting_143009(225787383, +), CAediting_143010(225787386, +), CAediting_143011(225787408, +), CAediting_143012(225787413, +), CAediting_143013(225787417, +), CAediting_143014(225787424, +), CAediting_143015(225787430, +), CAediting_143016(225787434, +), CAediting_143017(225787439, +), CAediting_143018(225787449, +), CAediting_143019(225787466, +), CAediting_143020(225787475, +), CAediting_143021(225787479, +), CAediting_143022(225787483, +), CAediting_143023(225787484, +), CAediting_143024(225787494, +), CAediting_143025(225787499, +), CAediting_143026(225787514, +), CAediting_143027(225787516, +), CAediting_143028(225787518, +), CAediting_143029(225787519, +), CAediting_143030(225787522, +), CAediting_143031(225787536, +), CAediting_143032(225787880, +), CAediting_143033(225788179, +), CAediting_143034(225788208, +), CAediting_143035(225788209, +), CAediting_143036(225788211, +), CAediting_143037(225788215, +), CAediting_143038(225788217, +), CAediting_143039(225788218, +), CAediting_143040(225788230, +), CAediting_143041(225788233, +), CAediting_143042(225788234, +), CAediting_143043(225788235, +), CAediting_143044(225788236, +), CAediting_143045(225788237, +), CAediting_143046(225788239, +), CAediting_143047(225788241, +), CAediting_143048(225788242, +), CAediting_143049(225788243, +), CAediting_143050(225788244, +), CAediting_143051(225788245, +), CAediting_143052(225788248, +), CAediting_143053(225788252, +), CAediting_143054(225788274, +), CAediting_143055(225788280, +), CAediting_143056(225788284, +), CAediting_143057(225788288, +), CAediting_143058(225788292, +), CAediting_143059(225788297, +), CAediting_143060(225788308, +), CAediting_143061(225788320, +), CAediting_143062(225788327, +), CAediting_143063(225788331, +), CAediting_143064(225788336, +), CAediting_143065(225788343, +), CAediting_143066(225788346, +), CAediting_143067(225788357, +), CAediting_143068(225788367, +), CAediting_143069(225788369, +), CAediting_143070(225788375, +), CAediting_143071(225788436, +), CAediting_143072(225788443, +), CAediting_143073(225788460, +), CAediting_143074(225788467, +), CAediting_143075(225788472, +), CAediting_143076(225788478, +), CAediting_143077(225788481, +), CAediting_143078(225788491, +), CAediting_143079(225788515, +), CAediting_143080(225788516, +), CAediting_143081(225788541, +), CAediting_143082(225788542, +), CAediting_143083(225788545, +), CAediting_143084(225788555, +), CAediting_143085(225788557, +), CAediting_143086(225788561, +), CAediting_143087(225788563, +), CAediting_143088(225788568, +), CAediting_143089(225788571, +), CAediting_143090(225788577, +), CAediting_143091(225788581, +), CAediting_143092(225788590, +), CAediting_143093(225788596, +), CAediting_143094(225788601, +), CAediting_143095(225788603, +), CAediting_143096(225788613, +), CAediting_143097(225788616, +), CAediting_143098(225788618, +), CAediting_143099(225788625, +), CAediting_143100(225788638, +), CAediting_143101(225788645, +), CAediting_143102(225788674, +), CAediting_143103(225788676, +), CAediting_143104(225788696, +), CAediting_143105(225788697, +), CAediting_143106(225788704, +),

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RNA editing positional annotations for SRP9 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_142881	chr1_225780126_+	intronic
CAediting_142882	chr1_225784386_+	intronic
CAediting_142883	chr1_225784388_+	intronic
CAediting_142884	chr1_225784434_+	intronic
CAediting_142885	chr1_225784448_+	intronic
CAediting_142886	chr1_225784451_+	intronic
CAediting_142887	chr1_225784466_+	intronic
CAediting_142888	chr1_225784509_+	intronic
CAediting_142889	chr1_225784510_+	intronic
CAediting_142890	chr1_225784511_+	intronic
CAediting_142891	chr1_225784512_+	intronic
CAediting_142892	chr1_225784523_+	intronic
CAediting_142893	chr1_225784529_+	intronic
CAediting_142894	chr1_225784604_+	intronic
CAediting_142895	chr1_225784609_+	intronic
CAediting_142896	chr1_225784617_+	intronic
CAediting_142897	chr1_225784624_+	intronic
CAediting_142898	chr1_225784625_+	intronic
CAediting_142899	chr1_225784639_+	intronic
CAediting_142900	chr1_225784654_+	intronic
CAediting_142901	chr1_225784748_+	intronic
CAediting_142902	chr1_225784761_+	intronic
CAediting_142903	chr1_225784762_+	intronic
CAediting_142904	chr1_225784770_+	intronic
CAediting_142905	chr1_225784787_+	intronic
CAediting_142906	chr1_225784790_+	intronic
CAediting_142907	chr1_225784802_+	intronic
CAediting_142908	chr1_225784829_+	intronic
CAediting_142909	chr1_225784830_+	intronic
CAediting_142910	chr1_225784837_+	intronic
CAediting_142911	chr1_225784959_+	intronic
CAediting_142912	chr1_225785027_+	intronic
CAediting_142913	chr1_225785035_+	intronic
CAediting_142914	chr1_225785071_+	intronic
CAediting_142915	chr1_225785115_+	intronic
CAediting_142916	chr1_225785157_+	intronic
CAediting_142917	chr1_225785170_+	intronic
CAediting_142918	chr1_225785188_+	intronic
CAediting_142919	chr1_225785197_+	intronic
CAediting_142920	chr1_225785200_+	intronic
CAediting_142921	chr1_225785261_+	intronic
CAediting_142922	chr1_225785313_+	intronic
CAediting_142923	chr1_225785320_+	intronic
CAediting_142924	chr1_225785339_+	intronic
CAediting_142925	chr1_225785351_+	intronic
CAediting_142926	chr1_225785498_+	intronic
CAediting_142927	chr1_225785507_+	intronic
CAediting_142928	chr1_225785510_+	intronic
CAediting_142929	chr1_225785522_+	intronic
CAediting_142930	chr1_225785587_+	intronic
CAediting_142931	chr1_225785604_+	intronic
CAediting_142932	chr1_225785642_+	intronic
CAediting_142933	chr1_225785782_+	intronic
CAediting_142934	chr1_225785783_+	intronic
CAediting_142935	chr1_225785786_+	intronic
CAediting_142936	chr1_225785808_+	intronic
CAediting_142937	chr1_225785809_+	intronic
CAediting_142938	chr1_225785812_+	intronic
CAediting_142939	chr1_225785822_+	intronic
CAediting_142940	chr1_225785840_+	intronic
CAediting_142941	chr1_225785844_+	intronic
CAediting_142942	chr1_225785848_+	intronic
CAediting_142943	chr1_225785849_+	intronic
CAediting_142944	chr1_225785857_+	intronic
CAediting_142945	chr1_225785863_+	intronic
CAediting_142946	chr1_225785866_+	intronic
CAediting_142947	chr1_225785873_+	intronic
CAediting_142948	chr1_225785880_+	intronic
CAediting_142949	chr1_225785883_+	intronic
CAediting_142950	chr1_225785908_+	intronic
CAediting_142951	chr1_225785929_+	intronic
CAediting_142952	chr1_225785933_+	intronic
CAediting_142953	chr1_225785946_+	intronic
CAediting_142954	chr1_225785947_+	intronic
CAediting_142955	chr1_225785960_+	intronic
CAediting_142956	chr1_225785982_+	intronic
CAediting_142957	chr1_225786904_+	exonic
CAediting_142958	chr1_225786910_+	exonic
CAediting_142959	chr1_225786917_+	exonic
CAediting_142960	chr1_225786942_+	exonic
CAediting_142961	chr1_225786969_+	exonic
CAediting_142962	chr1_225786972_+	UTR3
CAediting_142963	chr1_225786975_+	UTR3
CAediting_142964	chr1_225786982_+	UTR3
CAediting_142965	chr1_225786984_+	UTR3
CAediting_142966	chr1_225787008_+	intronic
CAediting_142967	chr1_225787009_+	intronic
CAediting_142968	chr1_225787015_+	intronic
CAediting_142969	chr1_225787016_+	intronic
CAediting_142970	chr1_225787028_+	intronic
CAediting_142971	chr1_225787033_+	intronic
CAediting_142972	chr1_225787044_+	intronic
CAediting_142973	chr1_225787046_+	intronic
CAediting_142974	chr1_225787053_+	intronic
CAediting_142975	chr1_225787066_+	intronic
CAediting_142976	chr1_225787078_+	intronic
CAediting_142977	chr1_225787079_+	intronic
CAediting_142978	chr1_225787104_+	intronic
CAediting_142979	chr1_225787105_+	intronic
CAediting_142980	chr1_225787106_+	intronic
CAediting_142981	chr1_225787109_+	intronic
CAediting_142982	chr1_225787118_+	intronic
CAediting_142983	chr1_225787127_+	intronic
CAediting_142984	chr1_225787128_+	intronic
CAediting_142985	chr1_225787160_+	intronic
CAediting_142986	chr1_225787279_+	intronic
CAediting_142987	chr1_225787280_+	intronic
CAediting_142988	chr1_225787285_+	intronic
CAediting_142989	chr1_225787288_+	intronic
CAediting_142990	chr1_225787302_+	intronic
CAediting_142991	chr1_225787318_+	intronic
CAediting_142992	chr1_225787323_+	intronic
CAediting_142993	chr1_225787326_+	intronic
CAediting_142994	chr1_225787332_+	intronic
CAediting_142995	chr1_225787337_+	intronic
CAediting_142996	chr1_225787343_+	intronic
CAediting_142997	chr1_225787347_+	intronic
CAediting_142998	chr1_225787349_+	intronic
CAediting_142999	chr1_225787351_+	intronic
CAediting_143000	chr1_225787355_+	intronic
CAediting_143001	chr1_225787356_+	intronic
CAediting_143002	chr1_225787368_+	intronic
CAediting_143003	chr1_225787371_+	intronic
CAediting_143004	chr1_225787373_+	intronic
CAediting_143005	chr1_225787374_+	intronic
CAediting_143006	chr1_225787377_+	intronic
CAediting_143007	chr1_225787379_+	intronic
CAediting_143008	chr1_225787380_+	intronic
CAediting_143009	chr1_225787383_+	intronic
CAediting_143010	chr1_225787386_+	intronic
CAediting_143011	chr1_225787408_+	intronic
CAediting_143012	chr1_225787413_+	intronic
CAediting_143013	chr1_225787417_+	intronic
CAediting_143014	chr1_225787424_+	intronic
CAediting_143015	chr1_225787430_+	intronic
CAediting_143016	chr1_225787434_+	intronic
CAediting_143017	chr1_225787439_+	intronic
CAediting_143018	chr1_225787449_+	intronic
CAediting_143019	chr1_225787466_+	intronic
CAediting_143020	chr1_225787475_+	intronic
CAediting_143021	chr1_225787479_+	intronic
CAediting_143022	chr1_225787483_+	intronic
CAediting_143023	chr1_225787484_+	intronic
CAediting_143024	chr1_225787494_+	intronic
CAediting_143025	chr1_225787499_+	intronic
CAediting_143026	chr1_225787514_+	intronic
CAediting_143027	chr1_225787516_+	intronic
CAediting_143028	chr1_225787518_+	intronic
CAediting_143029	chr1_225787519_+	intronic
CAediting_143030	chr1_225787522_+	intronic
CAediting_143031	chr1_225787536_+	intronic
CAediting_143032	chr1_225787880_+	intronic
CAediting_143033	chr1_225788179_+	intronic
CAediting_143034	chr1_225788208_+	intronic
CAediting_143035	chr1_225788209_+	intronic
CAediting_143036	chr1_225788211_+	intronic
CAediting_143037	chr1_225788215_+	intronic
CAediting_143038	chr1_225788217_+	intronic
CAediting_143039	chr1_225788218_+	intronic
CAediting_143040	chr1_225788230_+	intronic
CAediting_143041	chr1_225788233_+	intronic
CAediting_143042	chr1_225788234_+	intronic
CAediting_143043	chr1_225788235_+	intronic
CAediting_143044	chr1_225788236_+	intronic
CAediting_143045	chr1_225788237_+	intronic
CAediting_143046	chr1_225788239_+	intronic
CAediting_143047	chr1_225788241_+	intronic
CAediting_143048	chr1_225788242_+	intronic
CAediting_143049	chr1_225788243_+	intronic
CAediting_143050	chr1_225788244_+	intronic
CAediting_143051	chr1_225788245_+	intronic
CAediting_143052	chr1_225788248_+	intronic
CAediting_143053	chr1_225788252_+	intronic
CAediting_143054	chr1_225788274_+	intronic
CAediting_143055	chr1_225788280_+	intronic
CAediting_143056	chr1_225788284_+	intronic
CAediting_143057	chr1_225788288_+	intronic
CAediting_143058	chr1_225788292_+	intronic
CAediting_143059	chr1_225788297_+	intronic
CAediting_143060	chr1_225788308_+	intronic
CAediting_143061	chr1_225788320_+	intronic
CAediting_143062	chr1_225788327_+	intronic
CAediting_143063	chr1_225788331_+	intronic
CAediting_143064	chr1_225788336_+	intronic
CAediting_143065	chr1_225788343_+	intronic
CAediting_143066	chr1_225788346_+	intronic
CAediting_143067	chr1_225788357_+	intronic
CAediting_143068	chr1_225788367_+	intronic
CAediting_143069	chr1_225788369_+	intronic
CAediting_143070	chr1_225788375_+	intronic
CAediting_143071	chr1_225788436_+	intronic
CAediting_143072	chr1_225788443_+	intronic
CAediting_143073	chr1_225788460_+	intronic
CAediting_143074	chr1_225788467_+	intronic
CAediting_143075	chr1_225788472_+	intronic
CAediting_143076	chr1_225788478_+	intronic
CAediting_143077	chr1_225788481_+	intronic
CAediting_143078	chr1_225788491_+	intronic
CAediting_143079	chr1_225788515_+	intronic
CAediting_143080	chr1_225788516_+	intronic
CAediting_143081	chr1_225788541_+	intronic
CAediting_143082	chr1_225788542_+	intronic
CAediting_143083	chr1_225788545_+	intronic
CAediting_143084	chr1_225788555_+	intronic
CAediting_143085	chr1_225788557_+	intronic
CAediting_143086	chr1_225788561_+	intronic
CAediting_143087	chr1_225788563_+	intronic
CAediting_143088	chr1_225788568_+	intronic
CAediting_143089	chr1_225788571_+	intronic
CAediting_143090	chr1_225788577_+	intronic
CAediting_143091	chr1_225788581_+	intronic
CAediting_143092	chr1_225788590_+	intronic
CAediting_143093	chr1_225788596_+	intronic
CAediting_143094	chr1_225788601_+	intronic
CAediting_143095	chr1_225788603_+	intronic
CAediting_143096	chr1_225788613_+	intronic
CAediting_143097	chr1_225788616_+	intronic
CAediting_143098	chr1_225788618_+	intronic
CAediting_143099	chr1_225788625_+	intronic
CAediting_143100	chr1_225788638_+	intronic
CAediting_143101	chr1_225788645_+	intronic
CAediting_143102	chr1_225788674_+	intronic
CAediting_143103	chr1_225788676_+	intronic
CAediting_143104	chr1_225788696_+	intronic
CAediting_143105	chr1_225788697_+	intronic
CAediting_143106	chr1_225788704_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_142881	chr1_225780126_+	SINE	Alu	AluJr
CAediting_142882	chr1_225784386_+	SINE	Alu	AluY
CAediting_142883	chr1_225784388_+	SINE	Alu	AluY
CAediting_142884	chr1_225784434_+	SINE	Alu	AluY
CAediting_142885	chr1_225784448_+	SINE	Alu	AluY
CAediting_142886	chr1_225784451_+	SINE	Alu	AluY
CAediting_142887	chr1_225784466_+	SINE	Alu	AluY
CAediting_142888	chr1_225784509_+	SINE	Alu	AluY
CAediting_142889	chr1_225784510_+	SINE	Alu	AluY
CAediting_142890	chr1_225784511_+	SINE	Alu	AluY
CAediting_142891	chr1_225784512_+	SINE	Alu	AluY
CAediting_142892	chr1_225784523_+	SINE	Alu	AluY
CAediting_142893	chr1_225784529_+	SINE	Alu	AluY
CAediting_142894	chr1_225784604_+	SINE	Alu	AluY
CAediting_142895	chr1_225784609_+	SINE	Alu	AluY
CAediting_142896	chr1_225784617_+	SINE	Alu	AluY
CAediting_142897	chr1_225784624_+	SINE	Alu	AluY
CAediting_142898	chr1_225784625_+	SINE	Alu	AluY
CAediting_142899	chr1_225784639_+	SINE	Alu	AluY
CAediting_142900	chr1_225784654_+	SINE	Alu	AluY
CAediting_142901	chr1_225784748_+	SINE	Alu	AluY
CAediting_142902	chr1_225784761_+	SINE	Alu	AluY
CAediting_142903	chr1_225784762_+	SINE	Alu	AluY
CAediting_142904	chr1_225784770_+	SINE	Alu	AluY
CAediting_142905	chr1_225784787_+	SINE	Alu	AluY
CAediting_142906	chr1_225784790_+	SINE	Alu	AluY
CAediting_142907	chr1_225784802_+	SINE	Alu	AluY
CAediting_142908	chr1_225784829_+	SINE	Alu	AluY
CAediting_142909	chr1_225784830_+	SINE	Alu	AluY
CAediting_142910	chr1_225784837_+	SINE	Alu	AluY
CAediting_142911	chr1_225784959_+	SINE	Alu	AluJr
CAediting_142912	chr1_225785027_+	SINE	Alu	AluJr
CAediting_142913	chr1_225785035_+	SINE	Alu	AluJr
CAediting_142914	chr1_225785071_+	SINE	Alu	AluJr
CAediting_142915	chr1_225785115_+	SINE	Alu	AluSc
CAediting_142916	chr1_225785157_+	SINE	Alu	AluSc
CAediting_142917	chr1_225785170_+	SINE	Alu	AluSc
CAediting_142918	chr1_225785188_+	SINE	Alu	AluSc
CAediting_142919	chr1_225785197_+	SINE	Alu	AluSc
CAediting_142920	chr1_225785200_+	SINE	Alu	AluSc
CAediting_142921	chr1_225785261_+	SINE	Alu	AluSc
CAediting_142922	chr1_225785313_+	SINE	Alu	AluSc
CAediting_142923	chr1_225785320_+	SINE	Alu	AluSc
CAediting_142924	chr1_225785339_+	SINE	Alu	AluSc
CAediting_142925	chr1_225785351_+	SINE	Alu	AluSc
CAediting_142926	chr1_225785498_+	SINE	Alu	AluY
CAediting_142927	chr1_225785507_+	SINE	Alu	AluY
CAediting_142928	chr1_225785510_+	SINE	Alu	AluY
CAediting_142929	chr1_225785522_+	SINE	Alu	AluY
CAediting_142930	chr1_225785587_+	SINE	Alu	AluY
CAediting_142931	chr1_225785604_+	SINE	Alu	AluY
CAediting_142932	chr1_225785642_+	SINE	Alu	AluY
CAediting_142933	chr1_225785782_+	SINE	Alu	AluSz
CAediting_142934	chr1_225785783_+	SINE	Alu	AluSz
CAediting_142935	chr1_225785786_+	SINE	Alu	AluSz
CAediting_142936	chr1_225785808_+	SINE	Alu	AluSz
CAediting_142937	chr1_225785809_+	SINE	Alu	AluSz
CAediting_142938	chr1_225785812_+	SINE	Alu	AluSz
CAediting_142939	chr1_225785822_+	SINE	Alu	AluSz
CAediting_142940	chr1_225785840_+	SINE	Alu	AluSz
CAediting_142941	chr1_225785844_+	SINE	Alu	AluSz
CAediting_142942	chr1_225785848_+	SINE	Alu	AluSz
CAediting_142943	chr1_225785849_+	SINE	Alu	AluSz
CAediting_142944	chr1_225785857_+	SINE	Alu	AluSz
CAediting_142945	chr1_225785863_+	SINE	Alu	AluSz
CAediting_142946	chr1_225785866_+	SINE	Alu	AluSz
CAediting_142947	chr1_225785873_+	SINE	Alu	AluSz
CAediting_142948	chr1_225785880_+	SINE	Alu	AluSz
CAediting_142949	chr1_225785883_+	SINE	Alu	AluSz
CAediting_142950	chr1_225785908_+	SINE	Alu	AluSz
CAediting_142951	chr1_225785929_+	SINE	Alu	AluSz
CAediting_142952	chr1_225785933_+	SINE	Alu	AluSz
CAediting_142953	chr1_225785946_+	SINE	Alu	AluSz
CAediting_142954	chr1_225785947_+	SINE	Alu	AluSz
CAediting_142955	chr1_225785960_+	SINE	Alu	AluSz
CAediting_142956	chr1_225785982_+	SINE	Alu	AluSz
CAediting_142957	chr1_225786904_+	SINE	Alu	AluJo
CAediting_142958	chr1_225786910_+	SINE	Alu	AluJo
CAediting_142959	chr1_225786917_+	SINE	Alu	AluJo
CAediting_142960	chr1_225786942_+	SINE	Alu	AluJo
CAediting_142961	chr1_225786969_+	SINE	Alu	AluJo
CAediting_142962	chr1_225786972_+	SINE	Alu	AluJo
CAediting_142963	chr1_225786975_+	SINE	Alu	AluJo
CAediting_142964	chr1_225786982_+	SINE	Alu	AluJo
CAediting_142965	chr1_225786984_+	SINE	Alu	AluJo
CAediting_142966	chr1_225787008_+	SINE	Alu	AluJo
CAediting_142967	chr1_225787009_+	SINE	Alu	AluJo
CAediting_142968	chr1_225787015_+	SINE	Alu	AluJo
CAediting_142969	chr1_225787016_+	SINE	Alu	AluJo
CAediting_142970	chr1_225787028_+	SINE	Alu	AluJo
CAediting_142971	chr1_225787033_+	SINE	Alu	AluJo
CAediting_142972	chr1_225787044_+	SINE	Alu	AluJo
CAediting_142973	chr1_225787046_+	SINE	Alu	AluJo
CAediting_142974	chr1_225787053_+	SINE	Alu	AluJo
CAediting_142975	chr1_225787066_+	SINE	Alu	AluJo
CAediting_142976	chr1_225787078_+	SINE	Alu	AluJo
CAediting_142977	chr1_225787079_+	SINE	Alu	AluJo
CAediting_142978	chr1_225787104_+	SINE	Alu	AluJo
CAediting_142979	chr1_225787105_+	SINE	Alu	AluJo
CAediting_142980	chr1_225787106_+	SINE	Alu	AluJo
CAediting_142981	chr1_225787109_+	SINE	Alu	AluJo
CAediting_142982	chr1_225787118_+	SINE	Alu	AluJo
CAediting_142983	chr1_225787127_+	SINE	Alu	AluJo
CAediting_142984	chr1_225787128_+	SINE	Alu	AluJo
CAediting_142986	chr1_225787279_+	SINE	Alu	AluSx1
CAediting_142987	chr1_225787280_+	SINE	Alu	AluSx1
CAediting_142988	chr1_225787285_+	SINE	Alu	AluSx1
CAediting_142989	chr1_225787288_+	SINE	Alu	AluSx1
CAediting_142990	chr1_225787302_+	SINE	Alu	AluSx1
CAediting_142991	chr1_225787318_+	SINE	Alu	AluSx1
CAediting_142992	chr1_225787323_+	SINE	Alu	AluSx1
CAediting_142993	chr1_225787326_+	SINE	Alu	AluSx1
CAediting_142994	chr1_225787332_+	SINE	Alu	AluSx1
CAediting_142995	chr1_225787337_+	SINE	Alu	AluSx1
CAediting_142996	chr1_225787343_+	SINE	Alu	AluSx1
CAediting_142997	chr1_225787347_+	SINE	Alu	AluSx1
CAediting_142998	chr1_225787349_+	SINE	Alu	AluSx1
CAediting_142999	chr1_225787351_+	SINE	Alu	AluSx1
CAediting_143000	chr1_225787355_+	SINE	Alu	AluSx1
CAediting_143001	chr1_225787356_+	SINE	Alu	AluSx1
CAediting_143002	chr1_225787368_+	SINE	Alu	AluSx1
CAediting_143003	chr1_225787371_+	SINE	Alu	AluSx1
CAediting_143004	chr1_225787373_+	SINE	Alu	AluSx1
CAediting_143005	chr1_225787374_+	SINE	Alu	AluSx1
CAediting_143006	chr1_225787377_+	SINE	Alu	AluSx1
CAediting_143007	chr1_225787379_+	SINE	Alu	AluSx1
CAediting_143008	chr1_225787380_+	SINE	Alu	AluSx1
CAediting_143009	chr1_225787383_+	SINE	Alu	AluSx1
CAediting_143010	chr1_225787386_+	SINE	Alu	AluSx1
CAediting_143011	chr1_225787408_+	SINE	Alu	AluSx1
CAediting_143012	chr1_225787413_+	SINE	Alu	AluSx1
CAediting_143013	chr1_225787417_+	SINE	Alu	AluSx1
CAediting_143014	chr1_225787424_+	SINE	Alu	AluSx1
CAediting_143015	chr1_225787430_+	SINE	Alu	AluSx1
CAediting_143016	chr1_225787434_+	SINE	Alu	AluSx1
CAediting_143017	chr1_225787439_+	SINE	Alu	AluSx1
CAediting_143018	chr1_225787449_+	SINE	Alu	AluSx1
CAediting_143019	chr1_225787466_+	SINE	Alu	AluSx1
CAediting_143020	chr1_225787475_+	SINE	Alu	AluSx1
CAediting_143021	chr1_225787479_+	SINE	Alu	AluSx1
CAediting_143022	chr1_225787483_+	SINE	Alu	AluSx1
CAediting_143023	chr1_225787484_+	SINE	Alu	AluSx1
CAediting_143024	chr1_225787494_+	SINE	Alu	AluSx1
CAediting_143025	chr1_225787499_+	SINE	Alu	AluSx1
CAediting_143026	chr1_225787514_+	SINE	Alu	AluSx1
CAediting_143027	chr1_225787516_+	SINE	Alu	AluSx1
CAediting_143028	chr1_225787518_+	SINE	Alu	AluSx1
CAediting_143029	chr1_225787519_+	SINE	Alu	AluSx1
CAediting_143030	chr1_225787522_+	SINE	Alu	AluSx1
CAediting_143031	chr1_225787536_+	SINE	Alu	AluSx1
CAediting_143034	chr1_225788208_+	SINE	Alu	AluSx
CAediting_143035	chr1_225788209_+	SINE	Alu	AluSx
CAediting_143036	chr1_225788211_+	SINE	Alu	AluSx
CAediting_143037	chr1_225788215_+	SINE	Alu	AluSx
CAediting_143038	chr1_225788217_+	SINE	Alu	AluSx
CAediting_143039	chr1_225788218_+	SINE	Alu	AluSx
CAediting_143040	chr1_225788230_+	SINE	Alu	AluSx
CAediting_143041	chr1_225788233_+	SINE	Alu	AluSx
CAediting_143042	chr1_225788234_+	SINE	Alu	AluSx
CAediting_143043	chr1_225788235_+	SINE	Alu	AluSx
CAediting_143044	chr1_225788236_+	SINE	Alu	AluSx
CAediting_143045	chr1_225788237_+	SINE	Alu	AluSx
CAediting_143046	chr1_225788239_+	SINE	Alu	AluSx
CAediting_143047	chr1_225788241_+	SINE	Alu	AluSx
CAediting_143048	chr1_225788242_+	SINE	Alu	AluSx
CAediting_143049	chr1_225788243_+	SINE	Alu	AluSx
CAediting_143050	chr1_225788244_+	SINE	Alu	AluSx
CAediting_143051	chr1_225788245_+	SINE	Alu	AluSx
CAediting_143052	chr1_225788248_+	SINE	Alu	AluSx
CAediting_143053	chr1_225788252_+	SINE	Alu	AluSx
CAediting_143054	chr1_225788274_+	SINE	Alu	AluSx
CAediting_143055	chr1_225788280_+	SINE	Alu	AluSx
CAediting_143056	chr1_225788284_+	SINE	Alu	AluSx
CAediting_143057	chr1_225788288_+	SINE	Alu	AluSx
CAediting_143058	chr1_225788292_+	SINE	Alu	AluSx
CAediting_143059	chr1_225788297_+	SINE	Alu	AluSx
CAediting_143060	chr1_225788308_+	SINE	Alu	AluSx
CAediting_143061	chr1_225788320_+	SINE	Alu	AluSx
CAediting_143062	chr1_225788327_+	SINE	Alu	AluSx
CAediting_143063	chr1_225788331_+	SINE	Alu	AluSx
CAediting_143064	chr1_225788336_+	SINE	Alu	AluSx
CAediting_143065	chr1_225788343_+	SINE	Alu	AluSx
CAediting_143066	chr1_225788346_+	SINE	Alu	AluSx
CAediting_143067	chr1_225788357_+	SINE	Alu	AluSx
CAediting_143068	chr1_225788367_+	SINE	Alu	AluSx
CAediting_143069	chr1_225788369_+	SINE	Alu	AluSx
CAediting_143070	chr1_225788375_+	SINE	Alu	AluSx
CAediting_143071	chr1_225788436_+	SINE	Alu	AluSg
CAediting_143072	chr1_225788443_+	SINE	Alu	AluSg
CAediting_143073	chr1_225788460_+	SINE	Alu	AluSg
CAediting_143074	chr1_225788467_+	SINE	Alu	AluSg
CAediting_143075	chr1_225788472_+	SINE	Alu	AluSg
CAediting_143076	chr1_225788478_+	SINE	Alu	AluSg
CAediting_143077	chr1_225788481_+	SINE	Alu	AluSg
CAediting_143078	chr1_225788491_+	SINE	Alu	AluSg
CAediting_143079	chr1_225788515_+	SINE	Alu	AluSg
CAediting_143080	chr1_225788516_+	SINE	Alu	AluSg
CAediting_143081	chr1_225788541_+	SINE	Alu	AluSg
CAediting_143082	chr1_225788542_+	SINE	Alu	AluSg
CAediting_143083	chr1_225788545_+	SINE	Alu	AluSg
CAediting_143084	chr1_225788555_+	SINE	Alu	AluSg
CAediting_143085	chr1_225788557_+	SINE	Alu	AluSg
CAediting_143086	chr1_225788561_+	SINE	Alu	AluSg
CAediting_143087	chr1_225788563_+	SINE	Alu	AluSg
CAediting_143088	chr1_225788568_+	SINE	Alu	AluSg
CAediting_143089	chr1_225788571_+	SINE	Alu	AluSg
CAediting_143090	chr1_225788577_+	SINE	Alu	AluSg
CAediting_143091	chr1_225788581_+	SINE	Alu	AluSg
CAediting_143092	chr1_225788590_+	SINE	Alu	AluSg
CAediting_143093	chr1_225788596_+	SINE	Alu	AluSg
CAediting_143094	chr1_225788601_+	SINE	Alu	AluSg
CAediting_143095	chr1_225788603_+	SINE	Alu	AluSg
CAediting_143096	chr1_225788613_+	SINE	Alu	AluSg
CAediting_143097	chr1_225788616_+	SINE	Alu	AluSg
CAediting_143098	chr1_225788618_+	SINE	Alu	AluSg
CAediting_143099	chr1_225788625_+	SINE	Alu	AluSg
CAediting_143100	chr1_225788638_+	SINE	Alu	AluSg
CAediting_143101	chr1_225788645_+	SINE	Alu	AluSg
CAediting_143102	chr1_225788674_+	SINE	Alu	AluSg
CAediting_143103	chr1_225788676_+	SINE	Alu	AluSg
CAediting_143104	chr1_225788696_+	SINE	Alu	AluSg
CAediting_143105	chr1_225788697_+	SINE	Alu	AluSg
CAediting_143106	chr1_225788704_+	SINE	Alu	AluSg

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RNA A-to-I editing events in the alternative splicing sites for SRP9

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_142921	chr1_225785261_+	225785239:225785261	3SS	3+0i	TTTTTTTTTTTTTTTTTTTAGTA	-3.67	TTTTTTTTTTTTTTTTTTTAGTG	-3.61
ES	CAediting_142921	chr1_225785261_+	225785242:225785264	3SS	0+1i	TTTTTTTTTTTTTTTTAGTAGAG	-12.97	TTTTTTTTTTTTTTTTAGTGGAG	-4.22
MEX_1	CAediting_142921	chr1_225785261_+	225785239:225785261	3SS	3+0i	TTTTTTTTTTTTTTTTTTTAGTA	-3.67	TTTTTTTTTTTTTTTTTTTAGTG	-3.61
MEX_1	CAediting_142921	chr1_225785261_+	225785242:225785264	3SS	0+1i	TTTTTTTTTTTTTTTTAGTAGAG	-12.97	TTTTTTTTTTTTTTTTAGTGGAG	-4.22
ES	CAediting_142965	chr1_225786984_+	225786983:225786991	5SS	2+0i	CAGGTGTGC	6.46	CGGGTGTGC	4.15
IR	CAediting_142965	chr1_225786984_+	225786983:225786991	5SS	2+0i	CAGGTGTGC	6.46	CGGGTGTGC	4.15
MEX_2	CAediting_142965	chr1_225786984_+	225786983:225786991	5SS	2+0i	CAGGTGTGC	6.46	CGGGTGTGC	4.15
MEX_1	CAediting_142965	chr1_225786984_+	225786983:225786991	5SS	2+0i	CAGGTGTGC	6.46	CGGGTGTGC	4.15

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000143742.11.SRP9.

Correlation between RNA A-to-I editing and PSI for ENSG00000143742.11.SRP9.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SRP9

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

BRCA.CAediting_142972.ENSG00000143742.SRP9.png
Soverview

BRCA.CAediting_142973.ENSG00000143742.SRP9.png
Soverview

BRCA.CAediting_143057.ENSG00000143742.SRP9.png
Soverview

BRCA.CAediting_143078.ENSG00000143742.SRP9.png
Soverview

ESCA.CAediting_143011.ENSG00000143742.SRP9.png
Soverview

KIRP.CAediting_142973.ENSG00000143742.SRP9.png
Soverview

KIRP.CAediting_143023.ENSG00000143742.SRP9.png
Soverview

KIRP.CAediting_143036.ENSG00000143742.SRP9.png
Soverview

LUAD.CAediting_143001.ENSG00000143742.SRP9.png
Soverview

LUAD.CAediting_143078.ENSG00000143742.SRP9.png
Soverview

LUSC.CAediting_143057.ENSG00000143742.SRP9.png
Soverview

LUSC.CAediting_143078.ENSG00000143742.SRP9.png
Soverview

PCPG.CAediting_143057.ENSG00000143742.SRP9.png
Soverview

READ.CAediting_142972.ENSG00000143742.SRP9.png
Soverview

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Protein coding region RNA A-to-I editings for SRP9

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SRP9

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000143742.11	ENST00000366839	hsa-miR-200b-3p	225790378	225790384	7mer-m8	225790365	225790385	150	-12.67
CAediting_688080	chr9_63819626_+	ENSG00000143742.11	ENST00000366839	hsa-miR-4477b	225790315	225790321	7mer-m8	225790303	225790322	148	-9.61
CAediting_396018	chr5_1062918_-	ENSG00000143742.11	ENST00000366839	hsa-miR-4635	225790316	225790323	8mer-1a	225790301	225790323	145	-16.41

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for SRP9

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000366839.7	protein_coding
ENST00000619790.3	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_142957	ENST00000366839.7	chr1_225786904_+	-404.10	-404.50	-413.20
CAediting_142958	ENST00000366839.7	chr1_225786910_+	-407.30	-404.50	-413.20
CAediting_142959	ENST00000366839.7	chr1_225786917_+	-405.00	-404.50	-413.20
CAediting_142960	ENST00000366839.7	chr1_225786942_+	-408.50	-404.50	-413.20
CAediting_142961	ENST00000366839.7	chr1_225786969_+	-403.70	-404.50	-413.20
CAediting_142962	ENST00000366839.7	chr1_225786972_+	-403.20	-404.50	-413.20
CAediting_142963	ENST00000366839.7	chr1_225786975_+	-403.70	-404.50	-413.20
CAediting_142964	ENST00000366839.7	chr1_225786982_+	-406.20	-404.50	-413.20
CAediting_142965	ENST00000366839.7	chr1_225786984_+	-406.30	-404.50	-413.20
CAediting_142957	ENST00000619790.3	chr1_225786904_+	-130.40	-129.60	-134.90
CAediting_142958	ENST00000619790.3	chr1_225786910_+	-133.30	-129.60	-134.90
CAediting_142959	ENST00000619790.3	chr1_225786917_+	-129.50	-129.60	-134.90
CAediting_142960	ENST00000619790.3	chr1_225786942_+	-131.50	-129.60	-134.90
CAediting_142961	ENST00000619790.3	chr1_225786969_+	-130.50	-129.60	-134.90

Top

Relation with ADAR for SRP9

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_142962	chr1_225786972_+	7.1385623750832e-07	0.177753437013438	.	.	.	.
LIHC	CAediting_142962	chr1_225786972_+	0.00784804161078049	0.168123076446546	.	.	.	.
LUSC	CAediting_142962	chr1_225786972_+	9.92494360191146e-05	0.254911380845515	.	.	.	.
GBM	CAediting_142962	chr1_225786972_+	0.0179858031966211	0.22423309559646	.	.	.	.
HNSC	CAediting_142962	chr1_225786972_+	0.0037587091248825	0.232197609767027	.	.	.	.
ESCA	CAediting_142962	chr1_225786972_+	.	.	.	.	0.0290607765614338	0.257383074984658
PCPG	CAediting_142962	chr1_225786972_+	.	.	1.15788740686388e-06	0.384856759288746	.	.
SKCM	CAediting_142962	chr1_225786972_+	0.0235902919123266	0.138779884482187	.	.	.	.
LGG	CAediting_142968	chr1_225787015_+	0.00228593556039554	0.201930024125318	.	.	.	.
BRCA	CAediting_142968	chr1_225787015_+	0.000435729803294485	0.158463572859558	.	.	.	.
GBM	CAediting_142968	chr1_225787015_+	0.000223391376059185	0.314841758583918	.	.	.	.
BRCA	CAediting_142971	chr1_225787033_+	3.50060805165672e-09	0.219489433228928	.	.	.	.
GBM	CAediting_142971	chr1_225787033_+	0.000811059025536772	0.277939303193756	.	.	.	.
STAD	CAediting_142971	chr1_225787033_+	0.0220382136135581	0.161449524085596	.	.	.	.
KIRC	CAediting_142971	chr1_225787033_+	0.0425803934189066	0.118554169139381	.	.	.	.
ESCA	CAediting_142971	chr1_225787033_+	.	.	0.0143048996293708	0.226914110496707	.	.
OV	CAediting_142971	chr1_225787033_+	0.00179232898374785	0.210809309405189	.	.	.	.
SKCM	CAediting_142971	chr1_225787033_+	0.0153214052265515	0.286776077759619	.	.	.	.
BRCA	CAediting_142972	chr1_225787044_+	4.45993450901711e-10	0.214546571629855	.	.	.	.
GBM	CAediting_142972	chr1_225787044_+	0.0434432847323987	0.166814337831026	.	.	.	.
PRAD	CAediting_142972	chr1_225787044_+	0.0393464475662093	0.195017419263378	.	.	.	.
KIRC	CAediting_142972	chr1_225787044_+	0.0467356195196054	0.107147832712514	.	.	.	.
PCPG	CAediting_142972	chr1_225787044_+	0.0163225551239036	0.331621979658293	.	.	.	.
SKCM	CAediting_142972	chr1_225787044_+	8.43779706491407e-05	0.33914361614514	.	.	.	.
LGG	CAediting_142973	chr1_225787046_+	0.00174036023299666	0.160122015972972	.	.	.	.
BRCA	CAediting_142973	chr1_225787046_+	2.4211486509668e-12	0.240747606238332	.	.	.	.
COAD	CAediting_142973	chr1_225787046_+	0.0382411738717902	0.215268584359346	.	.	0.0247627658397988	0.232745153707085
GBM	CAediting_142973	chr1_225787046_+	0.0339234883926589	0.174483230616311	.	.	.	.
KIRC	CAediting_142973	chr1_225787046_+	0.0413964936637711	0.110514373424522	.	.	.	.
UCEC	CAediting_142973	chr1_225787046_+	0.0114117869583957	0.351574067022324	.	.	.	.
OV	CAediting_142973	chr1_225787046_+	0.0355253606317509	0.138406823668708	.	.	.	.
PCPG	CAediting_142973	chr1_225787046_+	0.00197133937391804	0.427247584396002	.	.	.	.
SKCM	CAediting_142973	chr1_225787046_+	0.000191265902488064	0.319180328581379	.	.	.	.
LGG	CAediting_142987	chr1_225787280_+	0.0259257211006362	0.142592538278925	.	.	.	.
BRCA	CAediting_142987	chr1_225787280_+	3.51141882218935e-18	0.374374113978741	.	.	.	.
LUAD	CAediting_142987	chr1_225787280_+	3.54812471815673e-05	0.301430403609262	.	.	.	.
LUSC	CAediting_142987	chr1_225787280_+	0.0260661630010708	0.217160744829392	.	.	.	.
GBM	CAediting_142987	chr1_225787280_+	0.015815270081562	0.238419495899434	.	.	.	.
OV	CAediting_142987	chr1_225787280_+	0.0027302566094281	0.33484942041917	.	.	.	.
SKCM	CAediting_142987	chr1_225787280_+	0.0194018374080445	0.296221958363622	.	.	.	.
STAD	CAediting_142999	chr1_225787351_+	.	.	0.0327269456868519	0.288414564878606	.	.
BRCA	CAediting_143011	chr1_225787408_+	0.00263914460126496	0.253161103286894	.	.	0.0293637087227218	0.184857495759008
GBM	CAediting_143011	chr1_225787408_+	0.0297193378869193	0.2677864724264	.	.	.	.
BRCA	CAediting_143012	chr1_225787413_+	0.00134791654397069	0.216770469829056	0.0173315992145358	0.161781725530009	.	.
GBM	CAediting_143012	chr1_225787413_+	0.0420455869025905	0.254942190203601	.	.	.	.
BRCA	CAediting_143013	chr1_225787417_+	.	.	.	.	0.0499670567359727	0.184867171713382
LGG	CAediting_143023	chr1_225787484_+	0.000303862628848667	0.203812874014511	.	.	.	.
BRCA	CAediting_143023	chr1_225787484_+	7.75451256243753e-05	0.160355765417331	.	.	.	.
LUAD	CAediting_143023	chr1_225787484_+	0.000199038101951929	0.276893209582832	.	.	.	.
LUSC	CAediting_143023	chr1_225787484_+	0.000376394693739084	0.298499345517933	.	.	.	.
GBM	CAediting_143023	chr1_225787484_+	0.00382347962636517	0.251053343056712	.	.	.	.
OV	CAediting_143023	chr1_225787484_+	0.0393556841948355	0.160098527847332	.	.	.	.
LGG	CAediting_143032	chr1_225787880_+	0.000342816879856879	0.232108786023311	.	.	.	.
BRCA	CAediting_143032	chr1_225787880_+	5.65177852282701e-09	0.269142728273461	.	.	.	.
LUAD	CAediting_143032	chr1_225787880_+	0.0455369815982226	0.176394105573164	.	.	.	.
LGG	CAediting_143035	chr1_225788209_+	2.69988747366605e-05	0.385500255123607	.	.	.	.
BRCA	CAediting_143035	chr1_225788209_+	3.13413887739614e-14	0.383929515534814	.	.	.	.
LUAD	CAediting_143035	chr1_225788209_+	0.00112545645578808	0.302554450519844	.	.	.	.
KIRC	CAediting_143035	chr1_225788209_+	0.0481940563830206	0.221617729315673	.	.	.	.
BLCA	CAediting_143036	chr1_225788211_+	0.00307754630702151	0.308657819200298	.	.	.	.
LGG	CAediting_143036	chr1_225788211_+	1.1656538985611e-12	0.400241575442844	.	.	.	.
BRCA	CAediting_143036	chr1_225788211_+	2.98904114110648e-58	0.561512153196493	.	.	.	.
LIHC	CAediting_143036	chr1_225788211_+	0.0384756449616105	0.157064299168455	.	.	.	.
CESC	CAediting_143036	chr1_225788211_+	0.0310155741337934	0.269903304780722	.	.	.	.
LUAD	CAediting_143036	chr1_225788211_+	2.63680177621061e-13	0.434506893544952	.	.	.	.
LUSC	CAediting_143036	chr1_225788211_+	0.00265685460347862	0.225824306671022	.	.	.	.
GBM	CAediting_143036	chr1_225788211_+	2.24811469216097e-05	0.402761700711448	.	.	.	.
HNSC	CAediting_143036	chr1_225788211_+	0.0314689480004387	0.218595339794361	.	.	.	.
STAD	CAediting_143036	chr1_225788211_+	0.0343593818522717	0.190968280974628	.	.	.	.
KIRC	CAediting_143036	chr1_225788211_+	0.00046485370212165	0.206370508231879	.	.	.	.
PAAD	CAediting_143036	chr1_225788211_+	0.00856142961976277	0.36797092456639	.	.	.	.
PCPG	CAediting_143036	chr1_225788211_+	0.0453948220627	0.247189550092264	.	.	.	.
SKCM	CAediting_143036	chr1_225788211_+	0.000246732026974957	0.336935639808628	.	.	.	.
BRCA	CAediting_143042	chr1_225788234_+	0.0241272112822209	0.256865177949672	.	.	.	.
BRCA	CAediting_143043	chr1_225788235_+	0.00517979303495635	0.273526457255525	.	.	.	.
BRCA	CAediting_143045	chr1_225788237_+	0.0028393639817252	0.246163595129749	.	.	.	.
LGG	CAediting_143046	chr1_225788239_+	.	.	0.0166114735435485	0.198643063101251	.	.
BRCA	CAediting_143046	chr1_225788239_+	5.15737690501669e-15	0.352408832248835	.	.	.	.
LUSC	CAediting_143046	chr1_225788239_+	0.019728093586913	0.18593255726483	0.0103826864115109	0.204009535035739	0.0389078897907495	0.165004759208891
GBM	CAediting_143046	chr1_225788239_+	0.016896357272931	0.200212056675874	.	.	.	.
STAD	CAediting_143046	chr1_225788239_+	.	.	0.0235335141461354	0.176797160786019	.	.
KIRC	CAediting_143046	chr1_225788239_+	0.00952153118122901	0.190168074184461	.	.	.	.
ESCA	CAediting_143046	chr1_225788239_+	0.040903345335818	0.206940427428619	.	.	.	.
OV	CAediting_143046	chr1_225788239_+	0.00238769880530717	0.25562792296351	.	.	.	.
SKCM	CAediting_143046	chr1_225788239_+	0.0192671877588641	0.279162444157334	.	.	.	.
LGG	CAediting_143050	chr1_225788244_+	0.00012739045892832	0.436326166729107	.	.	.	.
BRCA	CAediting_143050	chr1_225788244_+	6.39553117106591e-10	0.353291160625326	.	.	.	.
LUAD	CAediting_143050	chr1_225788244_+	0.0371236957475502	0.222584807116947	.	.	.	.
KIRC	CAediting_143050	chr1_225788244_+	0.0075323848594908	0.279946736728402	.	.	.	.
ESCA	CAediting_143050	chr1_225788244_+	.	.	0.045367169171395	0.192108898954116	.	.
OV	CAediting_143050	chr1_225788244_+	0.000185877518785908	0.329546986072293	.	.	.	.
BRCA	CAediting_143052	chr1_225788248_+	0.00984786996085582	0.140013468280388	.	.	0.00449412518591342	0.153961474937858
STAD	CAediting_143052	chr1_225788248_+	0.002388998390543	0.227537622201342	.	.	.	.
SKCM	CAediting_143052	chr1_225788248_+	0.00569983752135905	0.374732898109346	.	.	.	.
BRCA	CAediting_143053	chr1_225788252_+	0.00441238279555977	0.162339510545916	.	.	.	.
LUSC	CAediting_143053	chr1_225788252_+	0.012139787660111	0.203651300904178	.	.	.	.
STAD	CAediting_143053	chr1_225788252_+	0.00082145610096761	0.224965200567925	.	.	.	.
BLCA	CAediting_143054	chr1_225788274_+	0.0119436495958758	0.265417248506243	.	.	.	.
LGG	CAediting_143054	chr1_225788274_+	0.0361346778391256	0.12529125127369	.	.	.	.
BRCA	CAediting_143054	chr1_225788274_+	1.37413260845194e-11	0.256515531037621	.	.	.	.
COAD	CAediting_143054	chr1_225788274_+	0.0157438904917964	0.215605549529499	.	.	.	.
LUSC	CAediting_143054	chr1_225788274_+	0.00149094684910762	0.185387408198626	.	.	.	.
PRAD	CAediting_143054	chr1_225788274_+	.	.	0.0182055441271592	0.28157603588915	.	.
STAD	CAediting_143054	chr1_225788274_+	0.0183208494942434	0.152821024017489	.	.	.	.
OV	CAediting_143054	chr1_225788274_+	0.000374265535001711	0.238291417430206	.	.	.	.
PAAD	CAediting_143054	chr1_225788274_+	0.0024168261639853	0.394135748843383	.	.	.	.
SKCM	CAediting_143054	chr1_225788274_+	0.0460344351719818	0.153241071527381	.	.	.	.
ESCA	CAediting_143056	chr1_225788284_+	.	.	.	.	0.0145427648015666	0.308986717175686
BLCA	CAediting_143057	chr1_225788288_+	2.56610042925936e-05	0.321371401504771	.	.	.	.
LGG	CAediting_143057	chr1_225788288_+	0.000363387278217326	0.169034509782374	.	.	.	.
BRCA	CAediting_143057	chr1_225788288_+	2.69665547210062e-32	0.381384437389526	.	.	.	.
LIHC	CAediting_143057	chr1_225788288_+	0.000275019334544417	0.297793377049327	.	.	.	.
CESC	CAediting_143057	chr1_225788288_+	0.00284909461685376	0.224899804846819	.	.	.	.
LUAD	CAediting_143057	chr1_225788288_+	8.25380077967966e-05	0.203761702331514	.	.	.	.
COAD	CAediting_143057	chr1_225788288_+	6.06683060480984e-09	0.417534598481013	.	.	.	.
LUSC	CAediting_143057	chr1_225788288_+	1.00299781399319e-12	0.348131897606209	.	.	.	.
GBM	CAediting_143057	chr1_225788288_+	0.000248889772192136	0.293951935549825	.	.	.	.
PRAD	CAediting_143057	chr1_225788288_+	0.0207496400362277	0.161046964006414	.	.	.	.
HNSC	CAediting_143057	chr1_225788288_+	1.12449334122687e-06	0.331576819542388	0.00337780324093204	0.203318150132851	.	.
STAD	CAediting_143057	chr1_225788288_+	0.00106500646878897	0.207445977539266	.	.	.	.
THCA	CAediting_143057	chr1_225788288_+	5.81299066502337e-07	0.346287402118004	.	.	.	.
KIRC	CAediting_143057	chr1_225788288_+	3.15835341353198e-10	0.305287239910197	.	.	.	.
UCEC	CAediting_143057	chr1_225788288_+	0.00502241347748027	0.262208938817017	.	.	.	.
PAAD	CAediting_143057	chr1_225788288_+	0.000184565602666295	0.358718269866601	.	.	.	.
PCPG	CAediting_143057	chr1_225788288_+	0.00162686716666525	0.329297411281019	.	.	.	.
SKCM	CAediting_143057	chr1_225788288_+	1.25499596083803e-13	0.444491543035501	.	.	.	.
SARC	CAediting_143057	chr1_225788288_+	0.000380330617022641	0.342001506030805	.	.	.	.
THYM	CAediting_143057	chr1_225788288_+	0.0387712585896287	0.276980450073903	.	.	.	.
BRCA	CAediting_143058	chr1_225788292_+	0.00732090363781848	0.165651077261826	.	.	.	.
LUAD	CAediting_143058	chr1_225788292_+	0.0299753218297466	0.232852307902517	.	.	.	.
GBM	CAediting_143058	chr1_225788292_+	0.00836014485797226	0.365467213324057	.	.	.	.
LGG	CAediting_143063	chr1_225788331_+	0.027610149328326	0.1670214913867	.	.	.	.
BRCA	CAediting_143063	chr1_225788331_+	2.8949800112606e-08	0.272623608186176	.	.	.	.
LUAD	CAediting_143063	chr1_225788331_+	0.000613883765312313	0.303399225910983	.	.	.	.
LUSC	CAediting_143063	chr1_225788331_+	0.0244589053539504	0.228369819346048	.	.	.	.
GBM	CAediting_143063	chr1_225788331_+	0.00361886168311321	0.281550862919984	.	.	.	.
SKCM	CAediting_143063	chr1_225788331_+	.	.	.	.	0.00722712758434997	0.355182261094756
BRCA	CAediting_143075	chr1_225788472_+	3.53987312860808e-08	0.258461482230586	.	.	.	.
OV	CAediting_143075	chr1_225788472_+	0.0169823663906961	0.204411785632324	.	.	.	.
BLCA	CAediting_143078	chr1_225788491_+	0.000215480111621401	0.293023575489246	.	.	.	.
BRCA	CAediting_143078	chr1_225788491_+	9.91074991136033e-10	0.214274441617159	.	.	.	.
LUAD	CAediting_143078	chr1_225788491_+	0.0326590004371283	0.114059121201299	.	.	.	.
COAD	CAediting_143078	chr1_225788491_+	0.033753647964589	0.167437637335783	.	.	.	.
LUSC	CAediting_143078	chr1_225788491_+	0.00622440865537001	0.138660979333601	.	.	.	.
HNSC	CAediting_143078	chr1_225788491_+	5.78422323726328e-10	0.435555381655869	.	.	.	.
STAD	CAediting_143078	chr1_225788491_+	0.0432700352487647	0.162572521452304	.	.	.	.
THCA	CAediting_143078	chr1_225788491_+	0.00304541160236694	0.248711496854239	.	.	.	.
KIRC	CAediting_143078	chr1_225788491_+	0.0121756050217407	0.135831431298132	.	.	.	.
KIRP	CAediting_143078	chr1_225788491_+	0.000659686782247507	0.336529394735113	.	.	.	.
SKCM	CAediting_143078	chr1_225788491_+	2.15157503653975e-05	0.282201434281843	.	.	.	.
STAD	CAediting_143083	chr1_225788545_+	.	.	.	.	4.52456314381582e-05	0.486806110752175
LGG	CAediting_143098	chr1_225788618_+	0.000647341409963132	0.214714719828128	.	.	.	.
BRCA	CAediting_143098	chr1_225788618_+	3.37316219557821e-21	0.394653542294756	.	.	.	.
LUAD	CAediting_143098	chr1_225788618_+	0.000644397648996376	0.257650143160109	.	.	.	.
LUSC	CAediting_143098	chr1_225788618_+	0.000462563972740546	0.31477537984422	.	.	.	.
GBM	CAediting_143098	chr1_225788618_+	0.000546557223473293	0.355382305484405	.	.	.	.
KIRC	CAediting_143098	chr1_225788618_+	5.57043287929723e-08	0.433836437779018	.	.	.	.
OV	CAediting_143098	chr1_225788618_+	0.0463031560570193	0.183826005610599	.	.	.	.
SKCM	CAediting_143098	chr1_225788618_+	0.0336749104216476	0.245606936284829	.	.	.	.

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Relation with cancer stages for SRP9

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_142972	chr1_225787044_+	0.0291328236494125	0.253768675039688
BLCA	pathologic_stage	CAediting_143057	chr1_225788288_+	0.0150657392201113	0.189539083322486
BLCA	pathologic_stage	CAediting_143078	chr1_225788491_+	0.0081861765119036	0.213065229650806
BRCA	pathologic_stage	CAediting_142987	chr1_225787280_+	2.30739003339573e-06	0.211337225336652
BRCA	pathologic_stage	CAediting_142988	chr1_225787285_+	0.0127749984436102	0.309659096812231
BRCA	pathologic_stage	CAediting_143013	chr1_225787417_+	0.0235919968496795	0.215752195680683
BRCA	pathologic_stage	CAediting_143054	chr1_225788274_+	0.00364167554129714	0.11311658710561
CESC	clinical_stage	CAediting_143078	chr1_225788491_+	0.0032986308629836	-0.231682652231808
ESCA	clinical_stage	CAediting_142972	chr1_225787044_+	0.0280642596964735	-0.343139938756968
ESCA	clinical_stage	CAediting_142973	chr1_225787046_+	0.0305744062664034	-0.338173959356286
ESCA	clinical_stage	CAediting_143063	chr1_225788331_+	0.0230992308882657	0.482035609735675
ESCA	clinical_stage	CAediting_143081	chr1_225788541_+	0.0112769929422091	-0.412037707639517
ESCA	pathologic_stage	CAediting_143081	chr1_225788541_+	0.0379332834195817	0.208948297510138
ESCA	pathologic_stage	CAediting_143091	chr1_225788581_+	0.00587637033738081	0.408728495744743
HNSC	clinical_stage	CAediting_143057	chr1_225788288_+	0.0399970173993148	0.144640284658541
KIRC	pathologic_stage	CAediting_142972	chr1_225787044_+	0.02874034232105	0.117934220503148
KIRC	pathologic_stage	CAediting_142973	chr1_225787046_+	0.0490944800877103	0.106805222191687
KIRC	pathologic_stage	CAediting_142987	chr1_225787280_+	0.00269407728122889	0.241759319382022
KIRC	pathologic_stage	CAediting_143023	chr1_225787484_+	0.0125304376823964	0.16622240610779
KIRP	clinical_stage	CAediting_143057	chr1_225788288_+	0.025364763392735	0.23966455491466
LIHC	pathologic_stage	CAediting_143078	chr1_225788491_+	0.000609007569956166	-0.347112025754805
LUAD	pathologic_stage	CAediting_143078	chr1_225788491_+	0.0126747958285006	0.134086730477768
LUSC	pathologic_stage	CAediting_143057	chr1_225788288_+	0.00832904406000973	0.132923614538695
LUSC	pathologic_stage	CAediting_143078	chr1_225788491_+	0.019276239067043	0.119226825591071
OV	clinical_stage	CAediting_142971	chr1_225787033_+	0.0229728868548214	0.155042585150235
OV	clinical_stage	CAediting_143051	chr1_225788245_+	0.0465682278023301	0.251729567163823
OV	clinical_stage	CAediting_143054	chr1_225788274_+	0.0109939359186233	0.172324696292847
STAD	pathologic_stage	CAediting_143046	chr1_225788239_+	0.0404883567533889	-0.163710002200274
STAD	pathologic_stage	CAediting_143087	chr1_225788563_+	0.0353888155949925	-0.276854884299884
TGCT	clinical_stage	CAediting_142973	chr1_225787046_+	0.0244259681025961	0.513819944498252
TGCT	pathologic_stage	CAediting_142973	chr1_225787046_+	0.0279888873747017	0.479101914549779
UCEC	clinical_stage	CAediting_142962	chr1_225786972_+	0.014480357907567	-0.185093686909615

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Relation with survival for SRP9

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_142968	chr1_225787015_+	0.0419014052168314	0.0369662	13.6303
LIHC	CAediting_143058	chr1_225788292_+	0.0103172006115011	0.0478155	0.000125272
COAD	CAediting_143036	chr1_225788211_+	0.00424321399530236	0.00577928	56249100
LUSC	CAediting_143098	chr1_225788618_+	0.00247303571620017	0.000932123	0.00327082
KIRC	CAediting_143054	chr1_225788274_+	0.00272373652466995	0.0216893	5.85182

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RelatedDrugs for SRP9

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SRP9

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene