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Editing gene: SPTAN1 (CAeditome ID:6709)

Gene summary for SPTAN1

Gene summary

Gene information	Gene symbol	SPTAN1
	Gene ID	6709
	Gene name	spectrin alpha, non-erythrocytic 1
	Synonyms	DEE5\|EIEE5\|NEAS\|SPTA2
	Cytomap	9q34.11
	Type of gene	protein-coding
	Description	spectrin alpha chain, non-erythrocytic 1alpha-II spectrinalpha-fodrinepididymis secretory sperm binding proteinfodrin alpha chainspectrin, non-erythroid alpha chainspectrin, non-erythroid alpha subunit
	Modification date	20210518
	UniProtAcc	Q13813
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
SPTAN1	GO:0015630	Spectrin alpha chain, non-erythrocytic 1	0000052
SPTAN1	GO:0043231	Spectrin alpha chain, non-erythrocytic 1	0000052

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RNA A-to-I events for SPTAN1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000197694.12

RNA A-to-I editing events in Cancer.

CAediting_714482(128556101, +), CAediting_714483(128556110, +), CAediting_714484(128559852, +), CAediting_714485(128559860, +), CAediting_714486(128560765, +), CAediting_714487(128560781, +), CAediting_714488(128560800, +), CAediting_714489(128560805, +), CAediting_714490(128560852, +), CAediting_714491(128560855, +), CAediting_714492(128560857, +), CAediting_714493(128560863, +), CAediting_714494(128560869, +), CAediting_714495(128560895, +), CAediting_714496(128560896, +), CAediting_714497(128560912, +), CAediting_714498(128560918, +), CAediting_714499(128560922, +), CAediting_714500(128560931, +), CAediting_714501(128560936, +), CAediting_714502(128560937, +), CAediting_714503(128560962, +), CAediting_714504(128560996, +), CAediting_714505(128560998, +), CAediting_714506(128561004, +), CAediting_714507(128561114, +), CAediting_714508(128561120, +), CAediting_714509(128561215, +), CAediting_714510(128561252, +), CAediting_714511(128561262, +), CAediting_714512(128561380, +), CAediting_714513(128561381, +), CAediting_714514(128561386, +), CAediting_714515(128561409, +), CAediting_714516(128561435, +), CAediting_714517(128561485, +), CAediting_714518(128561491, +), CAediting_714519(128561500, +), CAediting_714520(128561501, +), CAediting_714521(128561503, +), CAediting_714522(128561548, +), CAediting_714523(128561552, +), CAediting_714524(128564562, +), CAediting_714525(128571169, +), CAediting_714526(128571474, +), CAediting_714527(128571488, +), CAediting_714528(128571497, +), CAediting_714529(128571513, +), CAediting_714530(128571926, +), CAediting_714531(128589645, +), CAediting_714532(128589855, +), CAediting_714533(128590596, +), CAediting_714534(128590599, +), CAediting_714535(128590632, +), CAediting_714536(128590640, +), CAediting_714537(128590649, +), CAediting_714538(128590654, +), CAediting_714539(128590663, +), CAediting_714540(128590664, +), CAediting_714541(128590674, +), CAediting_714542(128590688, +), CAediting_714543(128590697, +), CAediting_714544(128590698, +), CAediting_714545(128590699, +), CAediting_714546(128590700, +), CAediting_714547(128590701, +), CAediting_714548(128590704, +), CAediting_714549(128590730, +), CAediting_714550(128590736, +), CAediting_714551(128590770, +), CAediting_714552(128590776, +), CAediting_714553(128590851, +), CAediting_714554(128590859, +), CAediting_714555(128591078, +), CAediting_714556(128591125, +), CAediting_714557(128591131, +), CAediting_714558(128591142, +), CAediting_714559(128591161, +), CAediting_714560(128591191, +), CAediting_714561(128591201, +), CAediting_714562(128591211, +), CAediting_714563(128591248, +), CAediting_714564(128591251, +), CAediting_714565(128591277, +), CAediting_714566(128592314, +), CAediting_714567(128592320, +), CAediting_714568(128595203, +), CAediting_714569(128595944, +), CAediting_714570(128596709, +), CAediting_714571(128596760, +), CAediting_714572(128596973, +), CAediting_714573(128596981, +), CAediting_714574(128597026, +), CAediting_714575(128597070, +), CAediting_714576(128597080, +), CAediting_714577(128597403, +), CAediting_714578(128597417, +), CAediting_714579(128597430, +), CAediting_714580(128597672, +), CAediting_714581(128598137, +), CAediting_714582(128599228, +), CAediting_714583(128599270, +), CAediting_714584(128599280, +), CAediting_714585(128599363, +), CAediting_714586(128599387, +), CAediting_714587(128599418, +), CAediting_714588(128601168, +), CAediting_714589(128601170, +), CAediting_714590(128601172, +), CAediting_714591(128601188, +), CAediting_714592(128601477, +), CAediting_714593(128601536, +), CAediting_714594(128602729, +), CAediting_714595(128602856, +), CAediting_714596(128605582, +), CAediting_714597(128605589, +), CAediting_714598(128605610, +), CAediting_714599(128605611, +), CAediting_714600(128605616, +), CAediting_714601(128605736, +), CAediting_714602(128606098, +), CAediting_714603(128606108, +), CAediting_714604(128606134, +), CAediting_714605(128606143, +), CAediting_714606(128606164, +), CAediting_714607(128606168, +), CAediting_714608(128606174, +), CAediting_714609(128606199, +), CAediting_714610(128606205, +), CAediting_714611(128606208, +), CAediting_714612(128606209, +), CAediting_714613(128606210, +), CAediting_714614(128606211, +), CAediting_714615(128606212, +), CAediting_714616(128606214, +), CAediting_714617(128606255, +), CAediting_714618(128606256, +), CAediting_714619(128606261, +), CAediting_714620(128606296, +), CAediting_714621(128606297, +), CAediting_714622(128606316, +), CAediting_714623(128606325, +), CAediting_714624(128606332, +), CAediting_714625(128606553, +), CAediting_714626(128606601, +), CAediting_714627(128606609, +), CAediting_714628(128606613, +), CAediting_714629(128606748, +), CAediting_714630(128606760, +), CAediting_714631(128607214, +), CAediting_714632(128607278, +), CAediting_714633(128611343, +), CAediting_714634(128611347, +), CAediting_714635(128614522, +), CAediting_714636(128614531, +), CAediting_714637(128616332, +), CAediting_714638(128617073, +), CAediting_714639(128617076, +), CAediting_714640(128617077, +), CAediting_714641(128617102, +), CAediting_714642(128622083, +), CAediting_714643(128622393, +), CAediting_714644(128623080, +), CAediting_714645(128623120, +), CAediting_714646(128623360, +), CAediting_714647(128623479, +), CAediting_714648(128623481, +), CAediting_714649(128623511, +), CAediting_714650(128623517, +), CAediting_714651(128623520, +), CAediting_714652(128623535, +), CAediting_714653(128623542, +), CAediting_714654(128623549, +), CAediting_714655(128623573, +), CAediting_714656(128623597, +), CAediting_714657(128623676, +), CAediting_714658(128623679, +), CAediting_714659(128623709, +), CAediting_714660(128623742, +), CAediting_714661(128623815, +), CAediting_714662(128623824, +), CAediting_714663(128623830, +), CAediting_714664(128623831, +), CAediting_714665(128623836, +), CAediting_714666(128623848, +), CAediting_714667(128623862, +), CAediting_714668(128623871, +), CAediting_714669(128623887, +), CAediting_714670(128623902, +), CAediting_714671(128623925, +), CAediting_714672(128623932, +), CAediting_714673(128623935, +), CAediting_714674(128623968, +), CAediting_714675(128624028, +), CAediting_714676(128624033, +), CAediting_714677(128624038, +), CAediting_714678(128626858, +), CAediting_714679(128626954, +), CAediting_714680(128626957, +), CAediting_714681(128628512, +), CAediting_714682(128629649, +), CAediting_714683(128629988, +), CAediting_714684(128630003, +), CAediting_714685(128631699, +), CAediting_714686(128631706, +), CAediting_714687(128631712, +), CAediting_714688(128631720, +), CAediting_714689(128631733, +), CAediting_714690(128631736, +), CAediting_714691(128631755, +), CAediting_714692(128631795, +), CAediting_714693(128631800, +), CAediting_714694(128633660, +),

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RNA editing positional annotations for SPTAN1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_714482	chr9_128556101_+	ncRNA_intronic
CAediting_714483	chr9_128556110_+	ncRNA_intronic
CAediting_714484	chr9_128559852_+	ncRNA_intronic
CAediting_714485	chr9_128559860_+	ncRNA_intronic
CAediting_714486	chr9_128560765_+	ncRNA_intronic
CAediting_714487	chr9_128560781_+	ncRNA_intronic
CAediting_714488	chr9_128560800_+	ncRNA_intronic
CAediting_714489	chr9_128560805_+	ncRNA_intronic
CAediting_714490	chr9_128560852_+	ncRNA_intronic
CAediting_714491	chr9_128560855_+	ncRNA_intronic
CAediting_714492	chr9_128560857_+	ncRNA_intronic
CAediting_714493	chr9_128560863_+	ncRNA_intronic
CAediting_714494	chr9_128560869_+	ncRNA_intronic
CAediting_714495	chr9_128560895_+	ncRNA_intronic
CAediting_714496	chr9_128560896_+	ncRNA_intronic
CAediting_714497	chr9_128560912_+	ncRNA_intronic
CAediting_714498	chr9_128560918_+	ncRNA_intronic
CAediting_714499	chr9_128560922_+	ncRNA_intronic
CAediting_714500	chr9_128560931_+	ncRNA_intronic
CAediting_714501	chr9_128560936_+	ncRNA_intronic
CAediting_714502	chr9_128560937_+	ncRNA_intronic
CAediting_714503	chr9_128560962_+	ncRNA_intronic
CAediting_714504	chr9_128560996_+	ncRNA_intronic
CAediting_714505	chr9_128560998_+	ncRNA_intronic
CAediting_714506	chr9_128561004_+	ncRNA_intronic
CAediting_714507	chr9_128561114_+	ncRNA_intronic
CAediting_714508	chr9_128561120_+	ncRNA_intronic
CAediting_714509	chr9_128561215_+	ncRNA_intronic
CAediting_714510	chr9_128561252_+	ncRNA_intronic
CAediting_714511	chr9_128561262_+	ncRNA_intronic
CAediting_714512	chr9_128561380_+	ncRNA_intronic
CAediting_714513	chr9_128561381_+	ncRNA_intronic
CAediting_714514	chr9_128561386_+	ncRNA_intronic
CAediting_714515	chr9_128561409_+	ncRNA_intronic
CAediting_714516	chr9_128561435_+	ncRNA_intronic
CAediting_714517	chr9_128561485_+	ncRNA_intronic
CAediting_714518	chr9_128561491_+	ncRNA_intronic
CAediting_714519	chr9_128561500_+	ncRNA_intronic
CAediting_714520	chr9_128561501_+	ncRNA_intronic
CAediting_714521	chr9_128561503_+	ncRNA_intronic
CAediting_714522	chr9_128561548_+	ncRNA_intronic
CAediting_714523	chr9_128561552_+	ncRNA_intronic
CAediting_714524	chr9_128564562_+	ncRNA_intronic
CAediting_714525	chr9_128571169_+	ncRNA_intronic
CAediting_714526	chr9_128571474_+	ncRNA_intronic
CAediting_714527	chr9_128571488_+	ncRNA_intronic
CAediting_714528	chr9_128571497_+	ncRNA_intronic
CAediting_714529	chr9_128571513_+	ncRNA_intronic
CAediting_714530	chr9_128571926_+	ncRNA_intronic
CAediting_714531	chr9_128589645_+	ncRNA_intronic
CAediting_714532	chr9_128589855_+	ncRNA_intronic
CAediting_714533	chr9_128590596_+	ncRNA_intronic
CAediting_714534	chr9_128590599_+	ncRNA_intronic
CAediting_714535	chr9_128590632_+	ncRNA_intronic
CAediting_714536	chr9_128590640_+	ncRNA_intronic
CAediting_714537	chr9_128590649_+	ncRNA_intronic
CAediting_714538	chr9_128590654_+	ncRNA_intronic
CAediting_714539	chr9_128590663_+	ncRNA_intronic
CAediting_714540	chr9_128590664_+	ncRNA_intronic
CAediting_714541	chr9_128590674_+	ncRNA_intronic
CAediting_714542	chr9_128590688_+	ncRNA_intronic
CAediting_714543	chr9_128590697_+	ncRNA_intronic
CAediting_714544	chr9_128590698_+	ncRNA_intronic
CAediting_714545	chr9_128590699_+	ncRNA_intronic
CAediting_714546	chr9_128590700_+	ncRNA_intronic
CAediting_714547	chr9_128590701_+	ncRNA_intronic
CAediting_714548	chr9_128590704_+	ncRNA_intronic
CAediting_714549	chr9_128590730_+	ncRNA_intronic
CAediting_714550	chr9_128590736_+	ncRNA_intronic
CAediting_714551	chr9_128590770_+	ncRNA_intronic
CAediting_714552	chr9_128590776_+	ncRNA_intronic
CAediting_714553	chr9_128590851_+	ncRNA_intronic
CAediting_714554	chr9_128590859_+	ncRNA_intronic
CAediting_714555	chr9_128591078_+	ncRNA_intronic
CAediting_714556	chr9_128591125_+	ncRNA_intronic
CAediting_714557	chr9_128591131_+	ncRNA_intronic
CAediting_714558	chr9_128591142_+	ncRNA_intronic
CAediting_714559	chr9_128591161_+	ncRNA_intronic
CAediting_714560	chr9_128591191_+	ncRNA_intronic
CAediting_714561	chr9_128591201_+	ncRNA_intronic
CAediting_714562	chr9_128591211_+	ncRNA_intronic
CAediting_714563	chr9_128591248_+	ncRNA_intronic
CAediting_714564	chr9_128591251_+	ncRNA_intronic
CAediting_714565	chr9_128591277_+	ncRNA_intronic
CAediting_714566	chr9_128592314_+	ncRNA_intronic
CAediting_714567	chr9_128592320_+	ncRNA_intronic
CAediting_714568	chr9_128595203_+	ncRNA_intronic
CAediting_714569	chr9_128595944_+	ncRNA_exonic
CAediting_714570	chr9_128596709_+	ncRNA_intronic
CAediting_714571	chr9_128596760_+	ncRNA_intronic
CAediting_714572	chr9_128596973_+	ncRNA_intronic
CAediting_714573	chr9_128596981_+	ncRNA_intronic
CAediting_714574	chr9_128597026_+	ncRNA_intronic
CAediting_714575	chr9_128597070_+	ncRNA_intronic
CAediting_714576	chr9_128597080_+	ncRNA_intronic
CAediting_714577	chr9_128597403_+	ncRNA_intronic
CAediting_714578	chr9_128597417_+	ncRNA_intronic
CAediting_714579	chr9_128597430_+	ncRNA_intronic
CAediting_714580	chr9_128597672_+	ncRNA_intronic
CAediting_714581	chr9_128598137_+	ncRNA_intronic
CAediting_714582	chr9_128599228_+	ncRNA_exonic
CAediting_714583	chr9_128599270_+	ncRNA_exonic
CAediting_714584	chr9_128599280_+	ncRNA_exonic
CAediting_714585	chr9_128599363_+	ncRNA_exonic
CAediting_714586	chr9_128599387_+	ncRNA_exonic
CAediting_714587	chr9_128599418_+	ncRNA_exonic
CAediting_714588	chr9_128601168_+	ncRNA_intronic
CAediting_714589	chr9_128601170_+	ncRNA_intronic
CAediting_714590	chr9_128601172_+	ncRNA_intronic
CAediting_714591	chr9_128601188_+	ncRNA_intronic
CAediting_714592	chr9_128601477_+	ncRNA_intronic
CAediting_714593	chr9_128601536_+	ncRNA_intronic
CAediting_714594	chr9_128602729_+	ncRNA_intronic
CAediting_714595	chr9_128602856_+	ncRNA_intronic
CAediting_714596	chr9_128605582_+	ncRNA_intronic
CAediting_714597	chr9_128605589_+	ncRNA_intronic
CAediting_714598	chr9_128605610_+	ncRNA_intronic
CAediting_714599	chr9_128605611_+	ncRNA_intronic
CAediting_714600	chr9_128605616_+	ncRNA_intronic
CAediting_714601	chr9_128605736_+	ncRNA_intronic
CAediting_714602	chr9_128606098_+	ncRNA_intronic
CAediting_714603	chr9_128606108_+	ncRNA_intronic
CAediting_714604	chr9_128606134_+	ncRNA_intronic
CAediting_714605	chr9_128606143_+	ncRNA_intronic
CAediting_714606	chr9_128606164_+	ncRNA_intronic
CAediting_714607	chr9_128606168_+	ncRNA_intronic
CAediting_714608	chr9_128606174_+	ncRNA_intronic
CAediting_714609	chr9_128606199_+	ncRNA_intronic
CAediting_714610	chr9_128606205_+	ncRNA_intronic
CAediting_714611	chr9_128606208_+	ncRNA_intronic
CAediting_714612	chr9_128606209_+	ncRNA_intronic
CAediting_714613	chr9_128606210_+	ncRNA_intronic
CAediting_714614	chr9_128606211_+	ncRNA_intronic
CAediting_714615	chr9_128606212_+	ncRNA_intronic
CAediting_714616	chr9_128606214_+	ncRNA_intronic
CAediting_714617	chr9_128606255_+	ncRNA_intronic
CAediting_714618	chr9_128606256_+	ncRNA_intronic
CAediting_714619	chr9_128606261_+	ncRNA_intronic
CAediting_714620	chr9_128606296_+	ncRNA_intronic
CAediting_714621	chr9_128606297_+	ncRNA_intronic
CAediting_714622	chr9_128606316_+	ncRNA_intronic
CAediting_714623	chr9_128606325_+	ncRNA_intronic
CAediting_714624	chr9_128606332_+	ncRNA_intronic
CAediting_714625	chr9_128606553_+	ncRNA_intronic
CAediting_714626	chr9_128606601_+	ncRNA_intronic
CAediting_714627	chr9_128606609_+	ncRNA_intronic
CAediting_714628	chr9_128606613_+	ncRNA_intronic
CAediting_714629	chr9_128606748_+	ncRNA_intronic
CAediting_714630	chr9_128606760_+	ncRNA_intronic
CAediting_714631	chr9_128607214_+	ncRNA_intronic
CAediting_714632	chr9_128607278_+	ncRNA_intronic
CAediting_714633	chr9_128611343_+	intronic
CAediting_714634	chr9_128611347_+	intronic
CAediting_714635	chr9_128614522_+	ncRNA_intronic
CAediting_714636	chr9_128614531_+	ncRNA_intronic
CAediting_714637	chr9_128616332_+	intronic
CAediting_714638	chr9_128617073_+	intronic
CAediting_714639	chr9_128617076_+	intronic
CAediting_714640	chr9_128617077_+	intronic
CAediting_714641	chr9_128617102_+	intronic
CAediting_714642	chr9_128622083_+	ncRNA_intronic
CAediting_714643	chr9_128622393_+	ncRNA_intronic
CAediting_714644	chr9_128623080_+	ncRNA_intronic
CAediting_714645	chr9_128623120_+	ncRNA_intronic
CAediting_714646	chr9_128623360_+	ncRNA_intronic
CAediting_714647	chr9_128623479_+	ncRNA_intronic
CAediting_714648	chr9_128623481_+	ncRNA_intronic
CAediting_714649	chr9_128623511_+	ncRNA_intronic
CAediting_714650	chr9_128623517_+	ncRNA_intronic
CAediting_714651	chr9_128623520_+	ncRNA_intronic
CAediting_714652	chr9_128623535_+	ncRNA_intronic
CAediting_714653	chr9_128623542_+	ncRNA_intronic
CAediting_714654	chr9_128623549_+	ncRNA_intronic
CAediting_714655	chr9_128623573_+	ncRNA_intronic
CAediting_714656	chr9_128623597_+	ncRNA_intronic
CAediting_714657	chr9_128623676_+	ncRNA_intronic
CAediting_714658	chr9_128623679_+	ncRNA_intronic
CAediting_714659	chr9_128623709_+	ncRNA_intronic
CAediting_714660	chr9_128623742_+	ncRNA_intronic
CAediting_714661	chr9_128623815_+	ncRNA_intronic
CAediting_714662	chr9_128623824_+	ncRNA_intronic
CAediting_714663	chr9_128623830_+	ncRNA_intronic
CAediting_714664	chr9_128623831_+	ncRNA_intronic
CAediting_714665	chr9_128623836_+	ncRNA_intronic
CAediting_714666	chr9_128623848_+	ncRNA_intronic
CAediting_714667	chr9_128623862_+	ncRNA_intronic
CAediting_714668	chr9_128623871_+	ncRNA_intronic
CAediting_714669	chr9_128623887_+	ncRNA_intronic
CAediting_714670	chr9_128623902_+	ncRNA_intronic
CAediting_714671	chr9_128623925_+	ncRNA_intronic
CAediting_714672	chr9_128623932_+	ncRNA_intronic
CAediting_714673	chr9_128623935_+	ncRNA_intronic
CAediting_714674	chr9_128623968_+	ncRNA_intronic
CAediting_714675	chr9_128624028_+	ncRNA_intronic
CAediting_714676	chr9_128624033_+	ncRNA_intronic
CAediting_714677	chr9_128624038_+	ncRNA_intronic
CAediting_714678	chr9_128626858_+	ncRNA_intronic
CAediting_714679	chr9_128626954_+	ncRNA_intronic
CAediting_714680	chr9_128626957_+	ncRNA_intronic
CAediting_714681	chr9_128628512_+	ncRNA_exonic
CAediting_714682	chr9_128629649_+	intronic
CAediting_714683	chr9_128629988_+	ncRNA_exonic
CAediting_714684	chr9_128630003_+	ncRNA_exonic
CAediting_714685	chr9_128631699_+	ncRNA_exonic
CAediting_714686	chr9_128631706_+	ncRNA_exonic
CAediting_714687	chr9_128631712_+	ncRNA_exonic
CAediting_714688	chr9_128631720_+	ncRNA_exonic
CAediting_714689	chr9_128631733_+	ncRNA_exonic
CAediting_714690	chr9_128631736_+	ncRNA_exonic
CAediting_714691	chr9_128631755_+	ncRNA_exonic
CAediting_714692	chr9_128631795_+	ncRNA_exonic
CAediting_714693	chr9_128631800_+	ncRNA_exonic
CAediting_714694	chr9_128633660_+	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_714482	chr9_128556101_+	SINE	Alu	AluSx3
CAediting_714483	chr9_128556110_+	SINE	Alu	AluSx3
CAediting_714484	chr9_128559852_+	SINE	Alu	AluSx
CAediting_714485	chr9_128559860_+	SINE	Alu	AluSx
CAediting_714486	chr9_128560765_+	SINE	Alu	AluSx1
CAediting_714487	chr9_128560781_+	SINE	Alu	AluSx1
CAediting_714488	chr9_128560800_+	SINE	Alu	AluSx1
CAediting_714489	chr9_128560805_+	SINE	Alu	AluSx1
CAediting_714490	chr9_128560852_+	SINE	Alu	AluSx1
CAediting_714491	chr9_128560855_+	SINE	Alu	AluSx1
CAediting_714492	chr9_128560857_+	SINE	Alu	AluSx1
CAediting_714493	chr9_128560863_+	SINE	Alu	AluSx1
CAediting_714494	chr9_128560869_+	SINE	Alu	AluSx1
CAediting_714495	chr9_128560895_+	SINE	Alu	AluSx1
CAediting_714496	chr9_128560896_+	SINE	Alu	AluSx1
CAediting_714497	chr9_128560912_+	SINE	Alu	AluSx1
CAediting_714498	chr9_128560918_+	SINE	Alu	AluSx1
CAediting_714499	chr9_128560922_+	SINE	Alu	AluSx1
CAediting_714500	chr9_128560931_+	SINE	Alu	AluSx1
CAediting_714501	chr9_128560936_+	SINE	Alu	AluSx1
CAediting_714502	chr9_128560937_+	SINE	Alu	AluSx1
CAediting_714503	chr9_128560962_+	SINE	Alu	AluSx1
CAediting_714504	chr9_128560996_+	SINE	Alu	AluSx1
CAediting_714505	chr9_128560998_+	SINE	Alu	AluSx1
CAediting_714506	chr9_128561004_+	SINE	Alu	AluSx1
CAediting_714507	chr9_128561114_+	SINE	Alu	AluSc
CAediting_714508	chr9_128561120_+	SINE	Alu	AluSc
CAediting_714509	chr9_128561215_+	SINE	Alu	AluSc
CAediting_714510	chr9_128561252_+	SINE	Alu	AluSc
CAediting_714511	chr9_128561262_+	SINE	Alu	AluSc
CAediting_714512	chr9_128561380_+	SINE	Alu	AluSc
CAediting_714513	chr9_128561381_+	SINE	Alu	AluSc
CAediting_714514	chr9_128561386_+	SINE	Alu	AluYf1
CAediting_714515	chr9_128561409_+	SINE	Alu	AluYf1
CAediting_714516	chr9_128561435_+	SINE	Alu	AluYf1
CAediting_714517	chr9_128561485_+	SINE	Alu	AluYf1
CAediting_714518	chr9_128561491_+	SINE	Alu	AluYf1
CAediting_714519	chr9_128561500_+	SINE	Alu	AluYf1
CAediting_714520	chr9_128561501_+	SINE	Alu	AluYf1
CAediting_714521	chr9_128561503_+	SINE	Alu	AluYf1
CAediting_714522	chr9_128561548_+	SINE	Alu	AluYf1
CAediting_714523	chr9_128561552_+	SINE	Alu	AluYf1
CAediting_714524	chr9_128564562_+	SINE	Alu	AluJb
CAediting_714525	chr9_128571169_+	SINE	Alu	AluJb
CAediting_714526	chr9_128571474_+	SINE	Alu	AluSq2
CAediting_714527	chr9_128571488_+	SINE	Alu	AluSq2
CAediting_714528	chr9_128571497_+	SINE	Alu	AluSq2
CAediting_714529	chr9_128571513_+	SINE	Alu	AluSq2
CAediting_714530	chr9_128571926_+	SINE	Alu	AluSz6
CAediting_714531	chr9_128589645_+	SINE	Alu	AluYj4
CAediting_714532	chr9_128589855_+	SINE	Alu	AluYj4
CAediting_714533	chr9_128590596_+	SINE	Alu	AluSc
CAediting_714534	chr9_128590599_+	SINE	Alu	AluSc
CAediting_714535	chr9_128590632_+	SINE	Alu	AluSc
CAediting_714536	chr9_128590640_+	SINE	Alu	AluSc
CAediting_714537	chr9_128590649_+	SINE	Alu	AluSc
CAediting_714538	chr9_128590654_+	SINE	Alu	AluSc
CAediting_714539	chr9_128590663_+	SINE	Alu	AluSc
CAediting_714540	chr9_128590664_+	SINE	Alu	AluSc
CAediting_714541	chr9_128590674_+	SINE	Alu	AluSc
CAediting_714542	chr9_128590688_+	SINE	Alu	AluSc
CAediting_714543	chr9_128590697_+	SINE	Alu	AluSc
CAediting_714544	chr9_128590698_+	SINE	Alu	AluSc
CAediting_714545	chr9_128590699_+	SINE	Alu	AluSc
CAediting_714546	chr9_128590700_+	SINE	Alu	AluSc
CAediting_714547	chr9_128590701_+	SINE	Alu	AluSc
CAediting_714548	chr9_128590704_+	SINE	Alu	AluSc
CAediting_714549	chr9_128590730_+	SINE	Alu	AluSc
CAediting_714550	chr9_128590736_+	SINE	Alu	AluSc
CAediting_714551	chr9_128590770_+	SINE	Alu	AluSc
CAediting_714552	chr9_128590776_+	SINE	Alu	AluSc
CAediting_714553	chr9_128590851_+	SINE	Alu	AluSc
CAediting_714554	chr9_128590859_+	SINE	Alu	AluSc
CAediting_714555	chr9_128591078_+	SINE	Alu	AluY
CAediting_714556	chr9_128591125_+	SINE	Alu	AluY
CAediting_714557	chr9_128591131_+	SINE	Alu	AluY
CAediting_714558	chr9_128591142_+	SINE	Alu	AluY
CAediting_714559	chr9_128591161_+	SINE	Alu	AluY
CAediting_714560	chr9_128591191_+	SINE	Alu	AluY
CAediting_714561	chr9_128591201_+	SINE	Alu	AluY
CAediting_714562	chr9_128591211_+	SINE	Alu	AluY
CAediting_714563	chr9_128591248_+	SINE	Alu	AluY
CAediting_714564	chr9_128591251_+	SINE	Alu	AluY
CAediting_714565	chr9_128591277_+	SINE	Alu	AluY
CAediting_714566	chr9_128592314_+	SINE	Alu	AluSg
CAediting_714567	chr9_128592320_+	SINE	Alu	AluSg
CAediting_714568	chr9_128595203_+	SINE	Alu	AluSz6
CAediting_714569	chr9_128595944_+	SINE	Alu	AluJb
CAediting_714570	chr9_128596709_+	SINE	Alu	AluJr
CAediting_714571	chr9_128596760_+	SINE	Alu	AluJr
CAediting_714572	chr9_128596973_+	SINE	Alu	AluSz6
CAediting_714573	chr9_128596981_+	SINE	Alu	AluSz6
CAediting_714574	chr9_128597026_+	SINE	Alu	AluSz6
CAediting_714575	chr9_128597070_+	SINE	Alu	AluSz6
CAediting_714576	chr9_128597080_+	SINE	Alu	AluSz6
CAediting_714577	chr9_128597403_+	SINE	Alu	AluJb
CAediting_714578	chr9_128597417_+	SINE	Alu	AluJb
CAediting_714579	chr9_128597430_+	SINE	Alu	AluJb
CAediting_714580	chr9_128597672_+	SINE	Alu	AluSg4
CAediting_714581	chr9_128598137_+	SINE	Alu	AluSp
CAediting_714582	chr9_128599228_+	SINE	Alu	AluSx
CAediting_714583	chr9_128599270_+	SINE	Alu	AluSx
CAediting_714584	chr9_128599280_+	SINE	Alu	AluSx
CAediting_714585	chr9_128599363_+	SINE	Alu	AluSx
CAediting_714586	chr9_128599387_+	SINE	Alu	AluSx
CAediting_714587	chr9_128599418_+	SINE	Alu	AluSx
CAediting_714588	chr9_128601168_+	SINE	Alu	AluSx
CAediting_714589	chr9_128601170_+	SINE	Alu	AluSx
CAediting_714590	chr9_128601172_+	SINE	Alu	AluSx
CAediting_714591	chr9_128601188_+	SINE	Alu	AluSx
CAediting_714592	chr9_128601477_+	SINE	Alu	AluJb
CAediting_714593	chr9_128601536_+	SINE	Alu	AluJb
CAediting_714594	chr9_128602729_+	SINE	Alu	AluSx
CAediting_714595	chr9_128602856_+	SINE	Alu	AluSx
CAediting_714596	chr9_128605582_+	SINE	Alu	AluSz
CAediting_714597	chr9_128605589_+	SINE	Alu	AluSz
CAediting_714598	chr9_128605610_+	SINE	Alu	AluSz
CAediting_714599	chr9_128605611_+	SINE	Alu	AluSz
CAediting_714600	chr9_128605616_+	SINE	Alu	AluSz
CAediting_714601	chr9_128605736_+	SINE	Alu	AluSq
CAediting_714602	chr9_128606098_+	SINE	Alu	AluSg
CAediting_714603	chr9_128606108_+	SINE	Alu	AluSg
CAediting_714604	chr9_128606134_+	SINE	Alu	AluSg
CAediting_714605	chr9_128606143_+	SINE	Alu	AluSg
CAediting_714606	chr9_128606164_+	SINE	Alu	AluSg
CAediting_714607	chr9_128606168_+	SINE	Alu	AluSg
CAediting_714608	chr9_128606174_+	SINE	Alu	AluSg
CAediting_714609	chr9_128606199_+	SINE	Alu	AluSg
CAediting_714610	chr9_128606205_+	SINE	Alu	AluSg
CAediting_714611	chr9_128606208_+	SINE	Alu	AluSg
CAediting_714612	chr9_128606209_+	SINE	Alu	AluSg
CAediting_714613	chr9_128606210_+	SINE	Alu	AluSg
CAediting_714614	chr9_128606211_+	SINE	Alu	AluSg
CAediting_714615	chr9_128606212_+	SINE	Alu	AluSg
CAediting_714616	chr9_128606214_+	SINE	Alu	AluSg
CAediting_714617	chr9_128606255_+	SINE	Alu	AluSg
CAediting_714618	chr9_128606256_+	SINE	Alu	AluSg
CAediting_714619	chr9_128606261_+	SINE	Alu	AluSg
CAediting_714620	chr9_128606296_+	SINE	Alu	AluSg
CAediting_714621	chr9_128606297_+	SINE	Alu	AluSg
CAediting_714622	chr9_128606316_+	SINE	Alu	AluSg
CAediting_714623	chr9_128606325_+	SINE	Alu	AluSg
CAediting_714624	chr9_128606332_+	SINE	Alu	AluSg
CAediting_714625	chr9_128606553_+	SINE	Alu	AluSp
CAediting_714626	chr9_128606601_+	SINE	Alu	AluSp
CAediting_714627	chr9_128606609_+	SINE	Alu	AluSp
CAediting_714628	chr9_128606613_+	SINE	Alu	AluSp
CAediting_714629	chr9_128606748_+	SINE	Alu	AluSp
CAediting_714630	chr9_128606760_+	SINE	Alu	AluSp
CAediting_714631	chr9_128607214_+	SINE	Alu	FLAM_C
CAediting_714632	chr9_128607278_+	SINE	Alu	FLAM_C
CAediting_714633	chr9_128611343_+	SINE	Alu	AluJb
CAediting_714634	chr9_128611347_+	SINE	Alu	AluJb
CAediting_714635	chr9_128614522_+	SINE	Alu	AluSx
CAediting_714636	chr9_128614531_+	SINE	Alu	AluSx
CAediting_714637	chr9_128616332_+	SINE	Alu	AluSz
CAediting_714638	chr9_128617073_+	SINE	Alu	AluSz
CAediting_714639	chr9_128617076_+	SINE	Alu	AluSz
CAediting_714640	chr9_128617077_+	SINE	Alu	AluSz
CAediting_714641	chr9_128617102_+	SINE	Alu	AluSz
CAediting_714643	chr9_128622393_+	SINE	Alu	AluSp
CAediting_714644	chr9_128623080_+	SINE	Alu	AluJb
CAediting_714645	chr9_128623120_+	SINE	Alu	AluJb
CAediting_714646	chr9_128623360_+	SINE	Alu	AluJb
CAediting_714647	chr9_128623479_+	SINE	Alu	AluSz6
CAediting_714648	chr9_128623481_+	SINE	Alu	AluSz6
CAediting_714649	chr9_128623511_+	SINE	Alu	AluSz6
CAediting_714650	chr9_128623517_+	SINE	Alu	AluSz6
CAediting_714651	chr9_128623520_+	SINE	Alu	AluSz6
CAediting_714652	chr9_128623535_+	SINE	Alu	AluSz6
CAediting_714653	chr9_128623542_+	SINE	Alu	AluSz6
CAediting_714654	chr9_128623549_+	SINE	Alu	AluSz6
CAediting_714655	chr9_128623573_+	SINE	Alu	AluSz6
CAediting_714656	chr9_128623597_+	SINE	Alu	AluSz6
CAediting_714657	chr9_128623676_+	SINE	Alu	AluSz6
CAediting_714658	chr9_128623679_+	SINE	Alu	AluSz6
CAediting_714659	chr9_128623709_+	SINE	Alu	AluSz6
CAediting_714660	chr9_128623742_+	SINE	Alu	AluSz6
CAediting_714661	chr9_128623815_+	SINE	Alu	AluSx
CAediting_714662	chr9_128623824_+	SINE	Alu	AluSx
CAediting_714663	chr9_128623830_+	SINE	Alu	AluSx
CAediting_714664	chr9_128623831_+	SINE	Alu	AluSx
CAediting_714665	chr9_128623836_+	SINE	Alu	AluSx
CAediting_714666	chr9_128623848_+	SINE	Alu	AluSx
CAediting_714667	chr9_128623862_+	SINE	Alu	AluSx
CAediting_714668	chr9_128623871_+	SINE	Alu	AluSx
CAediting_714669	chr9_128623887_+	SINE	Alu	AluSx
CAediting_714670	chr9_128623902_+	SINE	Alu	AluSx
CAediting_714671	chr9_128623925_+	SINE	Alu	AluSx
CAediting_714672	chr9_128623932_+	SINE	Alu	AluSx
CAediting_714673	chr9_128623935_+	SINE	Alu	AluSx
CAediting_714674	chr9_128623968_+	SINE	Alu	AluSx
CAediting_714675	chr9_128624028_+	SINE	Alu	AluSx
CAediting_714676	chr9_128624033_+	SINE	Alu	AluSx
CAediting_714677	chr9_128624038_+	SINE	Alu	AluSx
CAediting_714678	chr9_128626858_+	SINE	Alu	AluJr
CAediting_714679	chr9_128626954_+	SINE	Alu	AluJr
CAediting_714680	chr9_128626957_+	SINE	Alu	AluJr
CAediting_714685	chr9_128631699_+	SINE	Alu	AluSx1
CAediting_714686	chr9_128631706_+	SINE	Alu	AluSx1
CAediting_714687	chr9_128631712_+	SINE	Alu	AluSx1
CAediting_714688	chr9_128631720_+	SINE	Alu	AluSx1
CAediting_714689	chr9_128631733_+	SINE	Alu	AluSx1
CAediting_714690	chr9_128631736_+	SINE	Alu	AluSx1
CAediting_714691	chr9_128631755_+	SINE	Alu	AluSx1
CAediting_714692	chr9_128631795_+	SINE	Alu	AluSx1
CAediting_714693	chr9_128631800_+	SINE	Alu	AluSx1

Top

RNA A-to-I editing events in the alternative splicing sites for SPTAN1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000197694.12.SPTAN1.

Correlation between RNA A-to-I editing and PSI for ENSG00000197694.12.SPTAN1.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for SPTAN1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for SPTAN1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for SPTAN1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_714694	chr9_128633660_+	ENSG00000197694.12	ENST00000372731	hsa-miR-1275	128633653	128633660	8mer-1a	128633645	128633660	143	-17.07
CAediting_714694	chr9_128633660_+	ENSG00000197694.12	ENST00000372731	hsa-miR-4665-5p	128633653	128633660	8mer-1a	128633637	128633660	146	-19.64
CAediting_714694	chr9_128633660_+	ENSG00000197694.12	ENST00000358161	hsa-miR-1275	128633653	128633660	8mer-1a	128633645	128633660	143	-17.07
CAediting_714694	chr9_128633660_+	ENSG00000197694.12	ENST00000358161	hsa-miR-4665-5p	128633653	128633660	8mer-1a	128633637	128633660	146	-19.64

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000197694.12	ENST00000372731	hsa-miR-605-3p	128633545	128633552	8mer-1a	128633527	128633552	147	-20.36
CAediting_748296	chr10_51299626_+	ENSG00000197694.12	ENST00000630804	hsa-miR-605-3p	128633545	128633552	8mer-1a	128633527	128633552	147	-20.36
CAediting_748296	chr10_51299626_+	ENSG00000197694.12	ENST00000358161	hsa-miR-605-3p	128633545	128633552	8mer-1a	128633527	128633552	147	-20.36
CAediting_86358	chr1_109598906_+	ENSG00000197694.12	ENST00000372731	hsa-miR-197-5p	128633603	128633608	6mer	128633584	128633609	140	-36.97
CAediting_86358	chr1_109598906_+	ENSG00000197694.12	ENST00000630804	hsa-miR-197-5p	128633603	128633608	6mer	128633584	128633609	140	-36.97
CAediting_86358	chr1_109598906_+	ENSG00000197694.12	ENST00000358161	hsa-miR-197-5p	128633603	128633608	6mer	128633584	128633609	140	-36.97

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1524209	chrX_134546392_-	ENSG00000197694.12	ENST00000372731	hsa-miR-503-5p	128633359	128633365	7mer-m8	128633344	128633366	146	-19.9
CAediting_1524209	chrX_134546392_-	ENSG00000197694.12	ENST00000630804	hsa-miR-503-5p	128633359	128633365	7mer-m8	128633344	128633366	146	-19.9
CAediting_1524209	chrX_134546392_-	ENSG00000197694.12	ENST00000358161	hsa-miR-503-5p	128633359	128633365	7mer-m8	128633344	128633366	146	-19.9

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SPTAN1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for SPTAN1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for SPTAN1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for SPTAN1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for SPTAN1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SPTAN1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
SPTAN1	C0037769	West Syndrome	2	ORPHANET
SPTAN1	C0023893	Liver Cirrhosis, Experimental	1	CTD_human
SPTAN1	C0270715	Degenerative Diseases, Central Nervous System	1	CTD_human
SPTAN1	C0524851	Neurodegenerative Disorders	1	CTD_human
SPTAN1	C0751733	Degenerative Diseases, Spinal Cord	1	CTD_human
SPTAN1	C3150731	EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 5	1	CTD_human;GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene