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Editing gene: SPI1 (CAeditome ID:6688)

Gene summary for SPI1

Gene summary

Gene information	Gene symbol	SPI1
	Gene ID	6688
	Gene name	Spi-1 proto-oncogene
	Synonyms	OF\|PU.1\|SFPI1\|SPI-1\|SPI-A
	Cytomap	11p11.2
	Type of gene	protein-coding
	Description	transcription factor PU.131 kDa transforming proteinhematopoietic transcription factor PU.1spleen focus forming virus (SFFV) proviral integration oncogene spi1
	Modification date	20210518
	UniProtAcc	P17947
	Context	- 32590190(SPI1-induced upregulation of lncRNA SNHG6 promotes non-small cell lung cancer via miR-485-3p/VPS45 axis)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
SPI1	GO:0000976	Transcription factor PU.1	31146003
SPI1	GO:0000978	Transcription factor PU.1	20139074
SPI1	GO:0000987	Transcription factor PU.1	28481873
SPI1	GO:0000987	Transcription factor PU.1	30718772
SPI1	GO:0000987	Transcription factor PU.1	31018969
SPI1	GO:0000987	Transcription factor PU.1	31314592
SPI1	GO:0001216	Transcription factor PU.1	20139074
SPI1	GO:0001217	Transcription factor PU.1	20139074
SPI1	GO:0003700	Transcription factor PU.1	12833137
SPI1	GO:0003700	Transcription factor PU.1	27506447
SPI1	GO:0003700	Transcription factor PU.1	31018969
SPI1	GO:0006355	Transcription factor PU.1	31018969
SPI1	GO:0032088	Transcription factor PU.1	28362429
SPI1	GO:0044027	Transcription factor PU.1	20139074
SPI1	GO:0045814	Transcription factor PU.1	20139074
SPI1	GO:0045892	Transcription factor PU.1	20139074
SPI1	GO:0045944	Transcription factor PU.1	12833137
SPI1	GO:0045944	Transcription factor PU.1	20139074
SPI1	GO:0045944	Transcription factor PU.1	27506447
SPI1	GO:0045944	Transcription factor PU.1	28481873
SPI1	GO:0070102	Transcription factor PU.1	24429361
SPI1	GO:1902895	Transcription factor PU.1	20972335
SPI1	GO:0000785	Transcription factor PU.1	15304486
SPI1	GO:0005634	Transcription factor PU.1	20972335
SPI1	GO:0005634	Transcription factor PU.1	24504023
SPI1	GO:0005654	Transcription factor PU.1	0000052
SPI1	GO:0005667	Transcription factor PU.1	24429361

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RNA A-to-I events for SPI1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000066336.10

RNA A-to-I editing events in Cancer.

CAediting_810880(47357572, -), CAediting_810881(47360225, -), CAediting_810882(47360583, -), CAediting_810883(47360646, -), CAediting_810884(47360660, -), CAediting_810885(47360779, -), CAediting_810886(47360932, -), CAediting_810887(47360999, -), CAediting_810888(47362304, -), CAediting_810889(47362387, -), CAediting_810890(47362390, -), CAediting_810891(47362404, -), CAediting_810892(47362417, -), CAediting_810893(47362448, -), CAediting_810894(47362450, -), CAediting_810895(47362460, -), CAediting_810896(47362463, -), CAediting_810897(47362464, -), CAediting_810898(47362488, -), CAediting_810899(47362489, -), CAediting_810900(47362510, -), CAediting_810901(47362515, -), CAediting_810902(47362520, -), CAediting_810903(47362557, -), CAediting_810904(47362565, -), CAediting_810905(47362613, -), CAediting_810906(47362648, -), CAediting_810907(47362672, -), CAediting_810908(47362673, -), CAediting_810909(47362678, -), CAediting_810910(47362704, -), CAediting_810911(47362740, -), CAediting_810912(47362743, -), CAediting_810913(47362744, -), CAediting_810914(47362745, -), CAediting_810915(47362751, -), CAediting_810916(47362752, -), CAediting_810917(47362753, -), CAediting_810918(47362758, -), CAediting_810919(47362764, -), CAediting_810920(47362775, -), CAediting_810921(47362789, -), CAediting_810922(47362795, -), CAediting_810923(47363276, -), CAediting_810924(47363277, -), CAediting_810925(47363329, -), CAediting_810926(47363338, -), CAediting_810927(47363397, -), CAediting_810928(47363399, -), CAediting_810929(47363580, -), CAediting_810930(47363652, -), CAediting_810931(47363706, -), CAediting_810932(47363780, -), CAediting_810933(47363834, -), CAediting_810934(47363838, -), CAediting_810935(47363944, -), CAediting_810936(47364214, -), CAediting_810937(47364255, -), CAediting_810938(47364322, -), CAediting_810939(47365719, -), CAediting_810940(47365732, -), CAediting_810941(47365764, -), CAediting_810942(47365769, -), CAediting_810943(47365845, -), CAediting_810944(47365861, -), CAediting_810945(47365885, -), CAediting_810946(47365901, -), CAediting_810947(47365946, -), CAediting_810948(47365967, -), CAediting_810949(47365968, -), CAediting_810950(47366646, -), CAediting_810951(47366655, -), CAediting_810952(47366695, -), CAediting_810953(47366699, -), CAediting_810954(47366709, -), CAediting_810955(47366721, -), CAediting_810956(47366735, -), CAediting_810957(47366758, -), CAediting_810958(47366764, -), CAediting_810959(47366774, -), CAediting_810960(47366782, -), CAediting_810961(47367294, -), CAediting_810962(47367328, -), CAediting_810963(47367442, -), CAediting_810964(47367446, -), CAediting_810965(47367491, -), CAediting_810966(47367497, -), CAediting_810967(47367790, -), CAediting_810968(47367793, -), CAediting_810969(47367823, -), CAediting_810970(47367825, -), CAediting_810971(47367830, -), CAediting_810972(47367834, -), CAediting_810973(47367847, -), CAediting_810974(47367854, -), CAediting_810975(47367855, -), CAediting_810976(47367863, -), CAediting_810977(47367869, -), CAediting_810978(47367886, -), CAediting_810979(47367890, -), CAediting_810980(47367896, -), CAediting_810981(47367918, -), CAediting_810982(47367926, -), CAediting_810983(47367927, -), CAediting_810984(47367929, -), CAediting_810985(47367932, -), CAediting_810986(47367937, -), CAediting_810987(47367938, -), CAediting_810988(47367941, -), CAediting_810989(47367952, -), CAediting_810990(47367953, -), CAediting_810991(47367954, -), CAediting_810992(47367962, -), CAediting_810993(47367977, -), CAediting_810994(47367981, -), CAediting_810995(47367982, -), CAediting_810996(47367987, -), CAediting_810997(47367990, -), CAediting_810998(47367999, -), CAediting_810999(47368025, -), CAediting_811000(47368026, -), CAediting_811001(47368060, -), CAediting_811002(47368109, -), CAediting_811003(47368111, -), CAediting_811004(47368121, -), CAediting_811005(47368122, -), CAediting_811006(47368144, -), CAediting_811007(47368227, -), CAediting_811008(47368233, -), CAediting_811009(47368241, -), CAediting_811010(47368243, -), CAediting_811011(47368253, -), CAediting_811012(47368256, -), CAediting_811013(47368283, -), CAediting_811014(47368289, -), CAediting_811015(47368308, -), CAediting_811016(47368313, -), CAediting_811017(47368318, -), CAediting_811018(47368321, -), CAediting_811019(47368343, -), CAediting_811020(47368351, -), CAediting_811021(47368981, -), CAediting_811022(47370158, -), CAediting_811023(47370237, -), CAediting_811024(47370291, -), CAediting_811025(47370459, -), CAediting_811026(47370536, -), CAediting_811027(47370688, -), CAediting_811028(47372172, -), CAediting_811029(47372177, -), CAediting_811030(47372181, -), CAediting_811031(47372216, -), CAediting_811032(47372226, -), CAediting_811033(47372233, -), CAediting_811034(47372237, -), CAediting_811035(47372243, -), CAediting_811036(47372249, -), CAediting_811037(47372265, -), CAediting_811038(47372280, -), CAediting_811039(47372295, -), CAediting_811040(47372312, -), CAediting_811041(47372318, -), CAediting_811042(47372319, -), CAediting_811043(47372357, -), CAediting_811044(47372362, -), CAediting_811045(47372363, -), CAediting_811046(47373108, -), CAediting_811047(47373391, -), CAediting_811048(47373475, -), CAediting_811049(47373482, -), CAediting_811050(47373539, -), CAediting_811051(47373617, -),

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RNA editing positional annotations for SPI1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_810880	chr11_47357572_-	intronic
CAediting_810881	chr11_47360225_-	intronic
CAediting_810882	chr11_47360583_-	intronic
CAediting_810883	chr11_47360646_-	intronic
CAediting_810884	chr11_47360660_-	intronic
CAediting_810885	chr11_47360779_-	intronic
CAediting_810886	chr11_47360932_-	intronic
CAediting_810887	chr11_47360999_-	intronic
CAediting_810888	chr11_47362304_-	intronic
CAediting_810889	chr11_47362387_-	intronic
CAediting_810890	chr11_47362390_-	intronic
CAediting_810891	chr11_47362404_-	intronic
CAediting_810892	chr11_47362417_-	intronic
CAediting_810893	chr11_47362448_-	intronic
CAediting_810894	chr11_47362450_-	intronic
CAediting_810895	chr11_47362460_-	intronic
CAediting_810896	chr11_47362463_-	intronic
CAediting_810897	chr11_47362464_-	intronic
CAediting_810898	chr11_47362488_-	intronic
CAediting_810899	chr11_47362489_-	intronic
CAediting_810900	chr11_47362510_-	intronic
CAediting_810901	chr11_47362515_-	intronic
CAediting_810902	chr11_47362520_-	intronic
CAediting_810903	chr11_47362557_-	intronic
CAediting_810904	chr11_47362565_-	intronic
CAediting_810905	chr11_47362613_-	intronic
CAediting_810906	chr11_47362648_-	intronic
CAediting_810907	chr11_47362672_-	intronic
CAediting_810908	chr11_47362673_-	intronic
CAediting_810909	chr11_47362678_-	intronic
CAediting_810910	chr11_47362704_-	intronic
CAediting_810911	chr11_47362740_-	intronic
CAediting_810912	chr11_47362743_-	intronic
CAediting_810913	chr11_47362744_-	intronic
CAediting_810914	chr11_47362745_-	intronic
CAediting_810915	chr11_47362751_-	intronic
CAediting_810916	chr11_47362752_-	intronic
CAediting_810917	chr11_47362753_-	intronic
CAediting_810918	chr11_47362758_-	intronic
CAediting_810919	chr11_47362764_-	intronic
CAediting_810920	chr11_47362775_-	intronic
CAediting_810921	chr11_47362789_-	intronic
CAediting_810922	chr11_47362795_-	intronic
CAediting_810923	chr11_47363276_-	intronic
CAediting_810924	chr11_47363277_-	intronic
CAediting_810925	chr11_47363329_-	intronic
CAediting_810926	chr11_47363338_-	intronic
CAediting_810927	chr11_47363397_-	intronic
CAediting_810928	chr11_47363399_-	intronic
CAediting_810929	chr11_47363580_-	intronic
CAediting_810930	chr11_47363652_-	intronic
CAediting_810931	chr11_47363706_-	intronic
CAediting_810932	chr11_47363780_-	intronic
CAediting_810933	chr11_47363834_-	intronic
CAediting_810934	chr11_47363838_-	intronic
CAediting_810935	chr11_47363944_-	intronic
CAediting_810936	chr11_47364214_-	intronic
CAediting_810937	chr11_47364255_-	intronic
CAediting_810938	chr11_47364322_-	intronic
CAediting_810939	chr11_47365719_-	intronic
CAediting_810940	chr11_47365732_-	intronic
CAediting_810941	chr11_47365764_-	intronic
CAediting_810942	chr11_47365769_-	intronic
CAediting_810943	chr11_47365845_-	intronic
CAediting_810944	chr11_47365861_-	intronic
CAediting_810945	chr11_47365885_-	intronic
CAediting_810946	chr11_47365901_-	intronic
CAediting_810947	chr11_47365946_-	intronic
CAediting_810948	chr11_47365967_-	intronic
CAediting_810949	chr11_47365968_-	intronic
CAediting_810950	chr11_47366646_-	intronic
CAediting_810951	chr11_47366655_-	intronic
CAediting_810952	chr11_47366695_-	intronic
CAediting_810953	chr11_47366699_-	intronic
CAediting_810954	chr11_47366709_-	intronic
CAediting_810955	chr11_47366721_-	intronic
CAediting_810956	chr11_47366735_-	intronic
CAediting_810957	chr11_47366758_-	intronic
CAediting_810958	chr11_47366764_-	intronic
CAediting_810959	chr11_47366774_-	intronic
CAediting_810960	chr11_47366782_-	intronic
CAediting_810961	chr11_47367294_-	intronic
CAediting_810962	chr11_47367328_-	intronic
CAediting_810963	chr11_47367442_-	intronic
CAediting_810964	chr11_47367446_-	intronic
CAediting_810965	chr11_47367491_-	intronic
CAediting_810966	chr11_47367497_-	intronic
CAediting_810967	chr11_47367790_-	intronic
CAediting_810968	chr11_47367793_-	intronic
CAediting_810969	chr11_47367823_-	intronic
CAediting_810970	chr11_47367825_-	intronic
CAediting_810971	chr11_47367830_-	intronic
CAediting_810972	chr11_47367834_-	intronic
CAediting_810973	chr11_47367847_-	intronic
CAediting_810974	chr11_47367854_-	intronic
CAediting_810975	chr11_47367855_-	intronic
CAediting_810976	chr11_47367863_-	intronic
CAediting_810977	chr11_47367869_-	intronic
CAediting_810978	chr11_47367886_-	intronic
CAediting_810979	chr11_47367890_-	intronic
CAediting_810980	chr11_47367896_-	intronic
CAediting_810981	chr11_47367918_-	intronic
CAediting_810982	chr11_47367926_-	intronic
CAediting_810983	chr11_47367927_-	intronic
CAediting_810984	chr11_47367929_-	intronic
CAediting_810985	chr11_47367932_-	intronic
CAediting_810986	chr11_47367937_-	intronic
CAediting_810987	chr11_47367938_-	intronic
CAediting_810988	chr11_47367941_-	intronic
CAediting_810989	chr11_47367952_-	intronic
CAediting_810990	chr11_47367953_-	intronic
CAediting_810991	chr11_47367954_-	intronic
CAediting_810992	chr11_47367962_-	intronic
CAediting_810993	chr11_47367977_-	intronic
CAediting_810994	chr11_47367981_-	intronic
CAediting_810995	chr11_47367982_-	intronic
CAediting_810996	chr11_47367987_-	intronic
CAediting_810997	chr11_47367990_-	intronic
CAediting_810998	chr11_47367999_-	intronic
CAediting_810999	chr11_47368025_-	intronic
CAediting_811000	chr11_47368026_-	intronic
CAediting_811001	chr11_47368060_-	intronic
CAediting_811002	chr11_47368109_-	intronic
CAediting_811003	chr11_47368111_-	intronic
CAediting_811004	chr11_47368121_-	intronic
CAediting_811005	chr11_47368122_-	intronic
CAediting_811006	chr11_47368144_-	intronic
CAediting_811007	chr11_47368227_-	intronic
CAediting_811008	chr11_47368233_-	intronic
CAediting_811009	chr11_47368241_-	intronic
CAediting_811010	chr11_47368243_-	intronic
CAediting_811011	chr11_47368253_-	intronic
CAediting_811012	chr11_47368256_-	intronic
CAediting_811013	chr11_47368283_-	intronic
CAediting_811014	chr11_47368289_-	intronic
CAediting_811015	chr11_47368308_-	intronic
CAediting_811016	chr11_47368313_-	intronic
CAediting_811017	chr11_47368318_-	intronic
CAediting_811018	chr11_47368321_-	intronic
CAediting_811019	chr11_47368343_-	intronic
CAediting_811020	chr11_47368351_-	intronic
CAediting_811021	chr11_47368981_-	intronic
CAediting_811022	chr11_47370158_-	intronic
CAediting_811023	chr11_47370237_-	intronic
CAediting_811024	chr11_47370291_-	intronic
CAediting_811025	chr11_47370459_-	intronic
CAediting_811026	chr11_47370536_-	intronic
CAediting_811027	chr11_47370688_-	intronic
CAediting_811028	chr11_47372172_-	intronic
CAediting_811029	chr11_47372177_-	intronic
CAediting_811030	chr11_47372181_-	intronic
CAediting_811031	chr11_47372216_-	intronic
CAediting_811032	chr11_47372226_-	intronic
CAediting_811033	chr11_47372233_-	intronic
CAediting_811034	chr11_47372237_-	intronic
CAediting_811035	chr11_47372243_-	intronic
CAediting_811036	chr11_47372249_-	intronic
CAediting_811037	chr11_47372265_-	intronic
CAediting_811038	chr11_47372280_-	intronic
CAediting_811039	chr11_47372295_-	intronic
CAediting_811040	chr11_47372312_-	intronic
CAediting_811041	chr11_47372318_-	intronic
CAediting_811042	chr11_47372319_-	intronic
CAediting_811043	chr11_47372357_-	intronic
CAediting_811044	chr11_47372362_-	intronic
CAediting_811045	chr11_47372363_-	intronic
CAediting_811046	chr11_47373108_-	intronic
CAediting_811047	chr11_47373391_-	intronic
CAediting_811048	chr11_47373475_-	intronic
CAediting_811049	chr11_47373482_-	intronic
CAediting_811050	chr11_47373539_-	intronic
CAediting_811051	chr11_47373617_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_810880	chr11_47357572_-	SINE	Alu	AluSq2
CAediting_810881	chr11_47360225_-	SINE	MIR	MIRb
CAediting_810882	chr11_47360583_-	SINE	Alu	AluSc5
CAediting_810883	chr11_47360646_-	SINE	Alu	AluSc5
CAediting_810884	chr11_47360660_-	SINE	Alu	AluSc5
CAediting_810885	chr11_47360779_-	SINE	Alu	AluSc5
CAediting_810886	chr11_47360932_-	SINE	Alu	AluY
CAediting_810887	chr11_47360999_-	SINE	Alu	AluY
CAediting_810888	chr11_47362304_-	SINE	Alu	AluJr
CAediting_810889	chr11_47362387_-	SINE	Alu	AluJr
CAediting_810890	chr11_47362390_-	SINE	Alu	AluJr
CAediting_810891	chr11_47362404_-	SINE	Alu	AluJr
CAediting_810892	chr11_47362417_-	SINE	Alu	AluJr
CAediting_810893	chr11_47362448_-	SINE	Alu	AluJr
CAediting_810894	chr11_47362450_-	SINE	Alu	AluJr
CAediting_810895	chr11_47362460_-	SINE	Alu	AluJr
CAediting_810896	chr11_47362463_-	SINE	Alu	AluJr
CAediting_810897	chr11_47362464_-	SINE	Alu	AluJr
CAediting_810898	chr11_47362488_-	SINE	Alu	AluJr
CAediting_810899	chr11_47362489_-	SINE	Alu	AluJr
CAediting_810900	chr11_47362510_-	SINE	Alu	AluJr
CAediting_810901	chr11_47362515_-	SINE	Alu	AluJr
CAediting_810902	chr11_47362520_-	SINE	Alu	AluJr
CAediting_810903	chr11_47362557_-	SINE	Alu	AluJr
CAediting_810904	chr11_47362565_-	SINE	Alu	AluJr
CAediting_810905	chr11_47362613_-	SINE	Alu	AluSg
CAediting_810906	chr11_47362648_-	SINE	Alu	AluSg
CAediting_810907	chr11_47362672_-	SINE	Alu	AluSg
CAediting_810908	chr11_47362673_-	SINE	Alu	AluSg
CAediting_810909	chr11_47362678_-	SINE	Alu	AluSg
CAediting_810910	chr11_47362704_-	SINE	Alu	AluSg
CAediting_810911	chr11_47362740_-	SINE	Alu	AluSg
CAediting_810912	chr11_47362743_-	SINE	Alu	AluSg
CAediting_810913	chr11_47362744_-	SINE	Alu	AluSg
CAediting_810914	chr11_47362745_-	SINE	Alu	AluSg
CAediting_810915	chr11_47362751_-	SINE	Alu	AluSg
CAediting_810916	chr11_47362752_-	SINE	Alu	AluSg
CAediting_810917	chr11_47362753_-	SINE	Alu	AluSg
CAediting_810918	chr11_47362758_-	SINE	Alu	AluSg
CAediting_810919	chr11_47362764_-	SINE	Alu	AluSg
CAediting_810920	chr11_47362775_-	SINE	Alu	AluSg
CAediting_810921	chr11_47362789_-	SINE	Alu	AluSg
CAediting_810922	chr11_47362795_-	SINE	Alu	AluSg
CAediting_810923	chr11_47363276_-	SINE	Alu	AluSx1
CAediting_810924	chr11_47363277_-	SINE	Alu	AluSx1
CAediting_810925	chr11_47363329_-	SINE	Alu	AluSx1
CAediting_810926	chr11_47363338_-	SINE	Alu	AluSx1
CAediting_810927	chr11_47363397_-	SINE	Alu	AluSx1
CAediting_810928	chr11_47363399_-	SINE	Alu	AluSx1
CAediting_810929	chr11_47363580_-	SINE	Alu	AluJo
CAediting_810931	chr11_47363706_-	SINE	Alu	AluSx1
CAediting_810932	chr11_47363780_-	SINE	Alu	AluSx1
CAediting_810933	chr11_47363834_-	SINE	Alu	AluSx1
CAediting_810934	chr11_47363838_-	SINE	Alu	AluSx1
CAediting_810935	chr11_47363944_-	SINE	Alu	AluSx1
CAediting_810936	chr11_47364214_-	SINE	Alu	AluY
CAediting_810937	chr11_47364255_-	SINE	Alu	AluY
CAediting_810938	chr11_47364322_-	SINE	Alu	AluY
CAediting_810939	chr11_47365719_-	SINE	Alu	AluSg4
CAediting_810940	chr11_47365732_-	SINE	Alu	AluSg4
CAediting_810941	chr11_47365764_-	SINE	Alu	AluSg4
CAediting_810942	chr11_47365769_-	SINE	Alu	AluSg4
CAediting_810943	chr11_47365845_-	SINE	Alu	AluSg4
CAediting_810944	chr11_47365861_-	SINE	Alu	AluSg4
CAediting_810945	chr11_47365885_-	SINE	Alu	AluSg4
CAediting_810946	chr11_47365901_-	SINE	Alu	AluSg4
CAediting_810947	chr11_47365946_-	SINE	Alu	AluSg4
CAediting_810948	chr11_47365967_-	SINE	Alu	AluSg4
CAediting_810949	chr11_47365968_-	SINE	Alu	AluSg4
CAediting_810950	chr11_47366646_-	SINE	Alu	AluSq2
CAediting_810951	chr11_47366655_-	SINE	Alu	AluSq2
CAediting_810952	chr11_47366695_-	SINE	Alu	AluSq2
CAediting_810953	chr11_47366699_-	SINE	Alu	AluSq2
CAediting_810954	chr11_47366709_-	SINE	Alu	AluSq2
CAediting_810955	chr11_47366721_-	SINE	Alu	AluSq2
CAediting_810956	chr11_47366735_-	SINE	Alu	AluSq2
CAediting_810957	chr11_47366758_-	SINE	Alu	AluSq2
CAediting_810958	chr11_47366764_-	SINE	Alu	AluSq2
CAediting_810959	chr11_47366774_-	SINE	Alu	AluSq2
CAediting_810960	chr11_47366782_-	SINE	Alu	AluSq2
CAediting_810961	chr11_47367294_-	SINE	Alu	AluSz
CAediting_810962	chr11_47367328_-	SINE	Alu	AluSz
CAediting_810963	chr11_47367442_-	SINE	Alu	AluSz
CAediting_810964	chr11_47367446_-	SINE	Alu	AluSz
CAediting_810965	chr11_47367491_-	SINE	Alu	AluSz
CAediting_810966	chr11_47367497_-	SINE	Alu	AluSz
CAediting_810967	chr11_47367790_-	SINE	Alu	AluY
CAediting_810968	chr11_47367793_-	SINE	Alu	AluY
CAediting_810969	chr11_47367823_-	SINE	Alu	AluY
CAediting_810970	chr11_47367825_-	SINE	Alu	AluY
CAediting_810971	chr11_47367830_-	SINE	Alu	AluY
CAediting_810972	chr11_47367834_-	SINE	Alu	AluY
CAediting_810973	chr11_47367847_-	SINE	Alu	AluY
CAediting_810974	chr11_47367854_-	SINE	Alu	AluY
CAediting_810975	chr11_47367855_-	SINE	Alu	AluY
CAediting_810976	chr11_47367863_-	SINE	Alu	AluY
CAediting_810977	chr11_47367869_-	SINE	Alu	AluY
CAediting_810978	chr11_47367886_-	SINE	Alu	AluY
CAediting_810979	chr11_47367890_-	SINE	Alu	AluY
CAediting_810980	chr11_47367896_-	SINE	Alu	AluY
CAediting_810981	chr11_47367918_-	SINE	Alu	AluY
CAediting_810982	chr11_47367926_-	SINE	Alu	AluY
CAediting_810983	chr11_47367927_-	SINE	Alu	AluY
CAediting_810984	chr11_47367929_-	SINE	Alu	AluY
CAediting_810985	chr11_47367932_-	SINE	Alu	AluY
CAediting_810986	chr11_47367937_-	SINE	Alu	AluY
CAediting_810987	chr11_47367938_-	SINE	Alu	AluY
CAediting_810988	chr11_47367941_-	SINE	Alu	AluY
CAediting_810989	chr11_47367952_-	SINE	Alu	AluY
CAediting_810990	chr11_47367953_-	SINE	Alu	AluY
CAediting_810991	chr11_47367954_-	SINE	Alu	AluY
CAediting_810992	chr11_47367962_-	SINE	Alu	AluY
CAediting_810993	chr11_47367977_-	SINE	Alu	AluY
CAediting_810994	chr11_47367981_-	SINE	Alu	AluY
CAediting_810995	chr11_47367982_-	SINE	Alu	AluY
CAediting_810996	chr11_47367987_-	SINE	Alu	AluY
CAediting_810997	chr11_47367990_-	SINE	Alu	AluY
CAediting_810998	chr11_47367999_-	SINE	Alu	AluY
CAediting_810999	chr11_47368025_-	SINE	Alu	AluY
CAediting_811000	chr11_47368026_-	SINE	Alu	AluY
CAediting_811001	chr11_47368060_-	LINE	L1	L1MB2
CAediting_811002	chr11_47368109_-	SINE	Alu	AluSx1
CAediting_811003	chr11_47368111_-	SINE	Alu	AluSx1
CAediting_811004	chr11_47368121_-	SINE	Alu	AluSx1
CAediting_811005	chr11_47368122_-	SINE	Alu	AluSx1
CAediting_811006	chr11_47368144_-	SINE	Alu	AluSx1
CAediting_811007	chr11_47368227_-	SINE	Alu	AluSx1
CAediting_811008	chr11_47368233_-	SINE	Alu	AluSx1
CAediting_811009	chr11_47368241_-	SINE	Alu	AluSx1
CAediting_811010	chr11_47368243_-	SINE	Alu	AluSx1
CAediting_811011	chr11_47368253_-	SINE	Alu	AluSx1
CAediting_811012	chr11_47368256_-	SINE	Alu	AluSx1
CAediting_811013	chr11_47368283_-	SINE	Alu	AluSx1
CAediting_811014	chr11_47368289_-	SINE	Alu	AluSx1
CAediting_811015	chr11_47368308_-	SINE	Alu	AluSx1
CAediting_811016	chr11_47368313_-	SINE	Alu	AluSx1
CAediting_811017	chr11_47368318_-	SINE	Alu	AluSx1
CAediting_811018	chr11_47368321_-	SINE	Alu	AluSx1
CAediting_811019	chr11_47368343_-	SINE	Alu	AluSx1
CAediting_811020	chr11_47368351_-	SINE	Alu	AluSx1
CAediting_811021	chr11_47368981_-	SINE	Alu	AluSx
CAediting_811022	chr11_47370158_-	SINE	Alu	AluSx
CAediting_811023	chr11_47370237_-	SINE	Alu	AluSx
CAediting_811024	chr11_47370291_-	SINE	Alu	AluSx
CAediting_811025	chr11_47370459_-	SINE	Alu	AluSg
CAediting_811026	chr11_47370536_-	SINE	Alu	AluSg
CAediting_811027	chr11_47370688_-	SINE	Alu	AluSg
CAediting_811028	chr11_47372172_-	SINE	Alu	AluSc
CAediting_811029	chr11_47372177_-	SINE	Alu	AluSc
CAediting_811030	chr11_47372181_-	SINE	Alu	AluSc
CAediting_811031	chr11_47372216_-	SINE	Alu	AluSc
CAediting_811032	chr11_47372226_-	SINE	Alu	AluSc
CAediting_811033	chr11_47372233_-	SINE	Alu	AluSc
CAediting_811034	chr11_47372237_-	SINE	Alu	AluSc
CAediting_811035	chr11_47372243_-	SINE	Alu	AluSc
CAediting_811036	chr11_47372249_-	SINE	Alu	AluSc
CAediting_811037	chr11_47372265_-	SINE	Alu	AluSc
CAediting_811038	chr11_47372280_-	SINE	Alu	AluSc
CAediting_811039	chr11_47372295_-	SINE	Alu	AluSc
CAediting_811040	chr11_47372312_-	SINE	Alu	AluSc
CAediting_811041	chr11_47372318_-	SINE	Alu	AluSc
CAediting_811042	chr11_47372319_-	SINE	Alu	AluSc
CAediting_811043	chr11_47372357_-	SINE	Alu	AluSc
CAediting_811044	chr11_47372362_-	SINE	Alu	AluSc
CAediting_811045	chr11_47372363_-	SINE	Alu	AluSc
CAediting_811046	chr11_47373108_-	SINE	Alu	AluSx3
CAediting_811047	chr11_47373391_-	SINE	Alu	AluSz
CAediting_811048	chr11_47373475_-	SINE	Alu	AluSz
CAediting_811049	chr11_47373482_-	SINE	Alu	AluSz
CAediting_811050	chr11_47373539_-	SINE	Alu	AluSz
CAediting_811051	chr11_47373617_-	SINE	Alu	AluSz

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RNA A-to-I editing events in the alternative splicing sites for SPI1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000066336.10.SPI1.

Correlation between RNA A-to-I editing and PSI for ENSG00000066336.10.SPI1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SPI1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for SPI1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SPI1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1054808	chr15_66496985_-	ENSG00000066336.10	ENST00000378538	hsa-miR-4512	47355068	47355074	7mer-m8	47355067	47355088	140	-13.91
CAediting_86358	chr1_109598906_+	ENSG00000066336.10	ENST00000378538	hsa-miR-197-5p	47355030	47355036	7mer-m8	47355029	47355052	147	-31.8
CAediting_580943	chr7_100356700_+	ENSG00000066336.10	ENST00000378538	hsa-miR-6840-3p	47355135	47355141	7mer-m8	47355134	47355156	143	-23.75
CAediting_1054808	chr15_66496985_-	ENSG00000066336.10	ENST00000227163	hsa-miR-4512	47355068	47355074	7mer-m8	47355067	47355088	140	-13.91
CAediting_86358	chr1_109598906_+	ENSG00000066336.10	ENST00000227163	hsa-miR-197-5p	47355030	47355036	7mer-m8	47355029	47355052	147	-31.8
CAediting_580943	chr7_100356700_+	ENSG00000066336.10	ENST00000227163	hsa-miR-6840-3p	47355135	47355141	7mer-m8	47355134	47355156	143	-23.75
CAediting_580943	chr7_100356700_+	ENSG00000066336.10	ENST00000533030	hsa-miR-6840-3p	47355135	47355141	7mer-m8	47355134	47355156	143	-23.75
CAediting_468389	chr6_31355314_-	ENSG00000066336.10	ENST00000378538	hsa-miR-6891-5p	47354891	47354897	7mer-m8	47354890	47354908	152	-23.52

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SPI1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for SPI1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LAML	CAediting_811011	chr11_47368253_-	.	.	.	.	0.0396011309517166	0.20720648645311

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Relation with cancer stages for SPI1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for SPI1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for SPI1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SPI1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
SPI1	C0023466	Leukemia, Monocytic, Chronic	1	CTD_human
SPI1	C0023467	Leukemia, Myelocytic, Acute	1	CTD_human
SPI1	C0023470	Myeloid Leukemia	1	CTD_human
SPI1	C0026998	Acute Myeloid Leukemia, M1	1	CTD_human
SPI1	C1879321	Acute Myeloid Leukemia (AML-M2)	1	CTD_human
SPI1	C1961099	Precursor T-Cell Lymphoblastic Leukemia-Lymphoma	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene