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Editing gene: BNIP3 (CAeditome ID:664)

Gene summary for BNIP3

Gene summary

Gene information	Gene symbol	BNIP3
	Gene ID	664
	Gene name	BCL2 interacting protein 3
	Synonyms	NIP3
	Cytomap	10q26.3
	Type of gene	protein-coding
	Description	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3BCL2/adenovirus E1B 19kDa interacting protein 3BCL2/adenovirus E1B interacting protein 3nineteen kD interacting protein-3
	Modification date	20210518
	UniProtAcc	Q12983
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
BNIP3	GO:0042803	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	10381623
BNIP3	GO:0042803	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	9396766
BNIP3	GO:0010637	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	20436456
BNIP3	GO:0043065	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	10381623
BNIP3	GO:0043065	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	9973195
BNIP3	GO:0043068	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	10891486
BNIP3	GO:0043243	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	20436456
BNIP3	GO:0043653	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	20436456
BNIP3	GO:0045837	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	10891486
BNIP3	GO:0046902	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	10891486
BNIP3	GO:0051607	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	9973195
BNIP3	GO:0072593	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	10891486
BNIP3	GO:0090141	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	20436456
BNIP3	GO:0090200	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	20436456
BNIP3	GO:0097345	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	18371312
BNIP3	GO:0140507	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	9396766
BNIP3	GO:0005635	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	7954800
BNIP3	GO:0005739	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	18371312
BNIP3	GO:0005739	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	7954800
BNIP3	GO:0005739	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	7954800
BNIP3	GO:0005739	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	9396766
BNIP3	GO:0005741	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	22292033
BNIP3	GO:0031307	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	10891486
BNIP3	GO:0031966	BCL2/adenovirus E1B 19 kDa protein-interacting protein 3	10891486

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RNA A-to-I events for BNIP3

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000176171.10

RNA A-to-I editing events in Cancer.

CAediting_790035(131966568, -), CAediting_790036(131966595, -), CAediting_790037(131966596, -), CAediting_790038(131966607, -), CAediting_790039(131966634, -), CAediting_790040(131966635, -), CAediting_790041(131966643, -), CAediting_790042(131966648, -), CAediting_790043(131966666, -), CAediting_790044(131966679, -), CAediting_790045(131966683, -), CAediting_790046(131966689, -), CAediting_790047(131966715, -), CAediting_790048(131966718, -), CAediting_790049(131966719, -), CAediting_790050(131966720, -), CAediting_790051(131966721, -), CAediting_790052(131966724, -), CAediting_790053(131966746, -), CAediting_790054(131966747, -), CAediting_790055(131966750, -), CAediting_790056(131966752, -), CAediting_790057(131966755, -), CAediting_790058(131966765, -), CAediting_790059(131966768, -), CAediting_790060(131966776, -), CAediting_790061(131966785, -), CAediting_790062(131966796, -), CAediting_790063(131966814, -), CAediting_790064(131966822, -), CAediting_790065(131966823, -), CAediting_790066(131966829, -), CAediting_790067(131966920, -), CAediting_790068(131966928, -), CAediting_790069(131966943, -), CAediting_790070(131966970, -), CAediting_790071(131966973, -), CAediting_790072(131966987, -), CAediting_790073(131966989, -), CAediting_790074(131966992, -), CAediting_790075(131966996, -), CAediting_790076(131967013, -), CAediting_790077(131967018, -), CAediting_790078(131967019, -), CAediting_790079(131967045, -), CAediting_790080(131967049, -), CAediting_790081(131967051, -), CAediting_790082(131967062, -), CAediting_790083(131967063, -), CAediting_790084(131967075, -), CAediting_790085(131967082, -), CAediting_790086(131967084, -), CAediting_790087(131967107, -), CAediting_790088(131967139, -), CAediting_790089(131967147, -), CAediting_790090(131967148, -), CAediting_790091(131967156, -), CAediting_790092(131967164, -), CAediting_790093(131967166, -), CAediting_790094(131969932, -), CAediting_790095(131969975, -), CAediting_790096(131969987, -), CAediting_790097(131969996, -), CAediting_790098(131970011, -), CAediting_790099(131970013, -), CAediting_790100(131970030, -), CAediting_790101(131970031, -), CAediting_790102(131970096, -), CAediting_790103(131970122, -), CAediting_790104(131970152, -), CAediting_790105(131972376, -), CAediting_790106(131974466, -), CAediting_790107(131974480, -), CAediting_790108(131974526, -), CAediting_790109(131974542, -), CAediting_790110(131974548, -), CAediting_790111(131974579, -), CAediting_790112(131974652, -), CAediting_790113(131974653, -), CAediting_790114(131974671, -), CAediting_790115(131977157, -), CAediting_790116(131977264, -),

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RNA editing positional annotations for BNIP3 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_790035	chr10_131966568_-	UTR3
CAediting_790036	chr10_131966595_-	UTR3
CAediting_790037	chr10_131966596_-	UTR3
CAediting_790038	chr10_131966607_-	UTR3
CAediting_790039	chr10_131966634_-	UTR3
CAediting_790040	chr10_131966635_-	UTR3
CAediting_790041	chr10_131966643_-	UTR3
CAediting_790042	chr10_131966648_-	UTR3
CAediting_790043	chr10_131966666_-	UTR3
CAediting_790044	chr10_131966679_-	UTR3
CAediting_790045	chr10_131966683_-	UTR3
CAediting_790046	chr10_131966689_-	UTR3
CAediting_790047	chr10_131966715_-	UTR3
CAediting_790048	chr10_131966718_-	UTR3
CAediting_790049	chr10_131966719_-	UTR3
CAediting_790050	chr10_131966720_-	UTR3
CAediting_790051	chr10_131966721_-	UTR3
CAediting_790052	chr10_131966724_-	UTR3
CAediting_790053	chr10_131966746_-	UTR3
CAediting_790054	chr10_131966747_-	UTR3
CAediting_790055	chr10_131966750_-	UTR3
CAediting_790056	chr10_131966752_-	UTR3
CAediting_790057	chr10_131966755_-	UTR3
CAediting_790058	chr10_131966765_-	UTR3
CAediting_790059	chr10_131966768_-	UTR3
CAediting_790060	chr10_131966776_-	UTR3
CAediting_790061	chr10_131966785_-	UTR3
CAediting_790062	chr10_131966796_-	UTR3
CAediting_790063	chr10_131966814_-	UTR3
CAediting_790064	chr10_131966822_-	UTR3
CAediting_790065	chr10_131966823_-	UTR3
CAediting_790066	chr10_131966829_-	UTR3
CAediting_790067	chr10_131966920_-	UTR3
CAediting_790068	chr10_131966928_-	UTR3
CAediting_790069	chr10_131966943_-	UTR3
CAediting_790070	chr10_131966970_-	UTR3
CAediting_790071	chr10_131966973_-	UTR3
CAediting_790072	chr10_131966987_-	UTR3
CAediting_790073	chr10_131966989_-	UTR3
CAediting_790074	chr10_131966992_-	UTR3
CAediting_790075	chr10_131966996_-	UTR3
CAediting_790076	chr10_131967013_-	UTR3
CAediting_790077	chr10_131967018_-	UTR3
CAediting_790078	chr10_131967019_-	UTR3
CAediting_790079	chr10_131967045_-	UTR3
CAediting_790080	chr10_131967049_-	UTR3
CAediting_790081	chr10_131967051_-	UTR3
CAediting_790082	chr10_131967062_-	UTR3
CAediting_790083	chr10_131967063_-	UTR3
CAediting_790084	chr10_131967075_-	UTR3
CAediting_790085	chr10_131967082_-	UTR3
CAediting_790086	chr10_131967084_-	UTR3
CAediting_790087	chr10_131967107_-	UTR3
CAediting_790088	chr10_131967139_-	UTR3
CAediting_790089	chr10_131967147_-	UTR3
CAediting_790090	chr10_131967148_-	UTR3
CAediting_790091	chr10_131967156_-	UTR3
CAediting_790092	chr10_131967164_-	UTR3
CAediting_790093	chr10_131967166_-	UTR3
CAediting_790094	chr10_131969932_-	UTR3
CAediting_790095	chr10_131969975_-	UTR3
CAediting_790096	chr10_131969987_-	UTR3
CAediting_790097	chr10_131969996_-	UTR3
CAediting_790098	chr10_131970011_-	UTR3
CAediting_790099	chr10_131970013_-	UTR3
CAediting_790100	chr10_131970030_-	UTR3
CAediting_790101	chr10_131970031_-	UTR3
CAediting_790102	chr10_131970096_-	UTR3
CAediting_790103	chr10_131970122_-	UTR3
CAediting_790104	chr10_131970152_-	UTR3
CAediting_790105	chr10_131972376_-	intronic
CAediting_790106	chr10_131974466_-	intronic
CAediting_790107	chr10_131974480_-	intronic
CAediting_790108	chr10_131974526_-	intronic
CAediting_790109	chr10_131974542_-	intronic
CAediting_790110	chr10_131974548_-	intronic
CAediting_790111	chr10_131974579_-	intronic
CAediting_790112	chr10_131974652_-	intronic
CAediting_790113	chr10_131974653_-	intronic
CAediting_790114	chr10_131974671_-	intronic
CAediting_790115	chr10_131977157_-	intronic
CAediting_790116	chr10_131977264_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_790035	chr10_131966568_-	SINE	Alu	AluJo
CAediting_790036	chr10_131966595_-	SINE	Alu	AluJo
CAediting_790037	chr10_131966596_-	SINE	Alu	AluJo
CAediting_790038	chr10_131966607_-	SINE	Alu	AluJo
CAediting_790039	chr10_131966634_-	SINE	Alu	AluJo
CAediting_790040	chr10_131966635_-	SINE	Alu	AluJo
CAediting_790041	chr10_131966643_-	SINE	Alu	AluJo
CAediting_790042	chr10_131966648_-	SINE	Alu	AluJo
CAediting_790043	chr10_131966666_-	SINE	Alu	AluJo
CAediting_790044	chr10_131966679_-	SINE	Alu	AluJo
CAediting_790045	chr10_131966683_-	SINE	Alu	AluJo
CAediting_790046	chr10_131966689_-	SINE	Alu	AluJo
CAediting_790047	chr10_131966715_-	SINE	Alu	AluJo
CAediting_790048	chr10_131966718_-	SINE	Alu	AluJo
CAediting_790049	chr10_131966719_-	SINE	Alu	AluJo
CAediting_790050	chr10_131966720_-	SINE	Alu	AluJo
CAediting_790051	chr10_131966721_-	SINE	Alu	AluJo
CAediting_790052	chr10_131966724_-	SINE	Alu	AluJo
CAediting_790053	chr10_131966746_-	SINE	Alu	AluJo
CAediting_790054	chr10_131966747_-	SINE	Alu	AluJo
CAediting_790055	chr10_131966750_-	SINE	Alu	AluJo
CAediting_790056	chr10_131966752_-	SINE	Alu	AluJo
CAediting_790057	chr10_131966755_-	SINE	Alu	AluJo
CAediting_790058	chr10_131966765_-	SINE	Alu	AluJo
CAediting_790059	chr10_131966768_-	SINE	Alu	AluJo
CAediting_790060	chr10_131966776_-	SINE	Alu	AluJo
CAediting_790061	chr10_131966785_-	SINE	Alu	AluJo
CAediting_790062	chr10_131966796_-	SINE	Alu	AluJo
CAediting_790063	chr10_131966814_-	SINE	Alu	AluJo
CAediting_790064	chr10_131966822_-	SINE	Alu	AluJo
CAediting_790065	chr10_131966823_-	SINE	Alu	AluJo
CAediting_790066	chr10_131966829_-	SINE	Alu	AluJo
CAediting_790067	chr10_131966920_-	SINE	Alu	AluSx
CAediting_790068	chr10_131966928_-	SINE	Alu	AluSx
CAediting_790069	chr10_131966943_-	SINE	Alu	AluSx
CAediting_790070	chr10_131966970_-	SINE	Alu	AluSx
CAediting_790071	chr10_131966973_-	SINE	Alu	AluSx
CAediting_790072	chr10_131966987_-	SINE	Alu	AluSx
CAediting_790073	chr10_131966989_-	SINE	Alu	AluSx
CAediting_790074	chr10_131966992_-	SINE	Alu	AluSx
CAediting_790075	chr10_131966996_-	SINE	Alu	AluSx
CAediting_790076	chr10_131967013_-	SINE	Alu	AluSx
CAediting_790077	chr10_131967018_-	SINE	Alu	AluSx
CAediting_790078	chr10_131967019_-	SINE	Alu	AluSx
CAediting_790079	chr10_131967045_-	SINE	Alu	AluSx
CAediting_790080	chr10_131967049_-	SINE	Alu	AluSx
CAediting_790081	chr10_131967051_-	SINE	Alu	AluSx
CAediting_790082	chr10_131967062_-	SINE	Alu	AluSx
CAediting_790083	chr10_131967063_-	SINE	Alu	AluSx
CAediting_790084	chr10_131967075_-	SINE	Alu	AluSx
CAediting_790085	chr10_131967082_-	SINE	Alu	AluSx
CAediting_790086	chr10_131967084_-	SINE	Alu	AluSx
CAediting_790087	chr10_131967107_-	SINE	Alu	AluSx
CAediting_790088	chr10_131967139_-	SINE	Alu	AluSx
CAediting_790089	chr10_131967147_-	SINE	Alu	AluSx
CAediting_790090	chr10_131967148_-	SINE	Alu	AluSx
CAediting_790091	chr10_131967156_-	SINE	Alu	AluSx
CAediting_790092	chr10_131967164_-	SINE	Alu	AluSx
CAediting_790093	chr10_131967166_-	SINE	Alu	AluSx
CAediting_790094	chr10_131969932_-	SINE	Alu	AluSq
CAediting_790095	chr10_131969975_-	SINE	Alu	AluSq
CAediting_790096	chr10_131969987_-	SINE	Alu	AluSq
CAediting_790097	chr10_131969996_-	SINE	Alu	AluSq
CAediting_790098	chr10_131970011_-	SINE	Alu	AluSq
CAediting_790099	chr10_131970013_-	SINE	Alu	AluSq
CAediting_790100	chr10_131970030_-	SINE	Alu	AluSq
CAediting_790101	chr10_131970031_-	SINE	Alu	AluSq
CAediting_790102	chr10_131970096_-	SINE	Alu	AluSq
CAediting_790103	chr10_131970122_-	SINE	Alu	AluSq
CAediting_790104	chr10_131970152_-	SINE	Alu	AluSq
CAediting_790105	chr10_131972376_-	SINE	Alu	AluJo
CAediting_790106	chr10_131974466_-	SINE	Alu	AluJo
CAediting_790107	chr10_131974480_-	SINE	Alu	AluJo
CAediting_790108	chr10_131974526_-	SINE	Alu	AluJo
CAediting_790109	chr10_131974542_-	SINE	Alu	AluJo
CAediting_790110	chr10_131974548_-	SINE	Alu	AluJo
CAediting_790111	chr10_131974579_-	SINE	Alu	AluJo
CAediting_790112	chr10_131974652_-	SINE	Alu	AluJo
CAediting_790113	chr10_131974653_-	SINE	Alu	AluJo
CAediting_790114	chr10_131974671_-	SINE	Alu	AluJo
CAediting_790115	chr10_131977157_-	SINE	Alu	AluSq
CAediting_790116	chr10_131977264_-	SINE	Alu	AluSq

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RNA A-to-I editing events in the alternative splicing sites for BNIP3

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_790098	chr10_131970011_-	131970007:131970029	3SS	0+2i	TTTTTGTATTTTTAATAGAGACG	-4.91	TTTTTGTATTTTTAATAGGGACG	-12.86
IR	CAediting_790098	chr10_131970011_-	131970009:131970031	3SS	1+0i	AATTTTTGTATTTTTAATAGAGA	5.24	AATTTTTGTATTTTTAATAGGGA	7
IR	CAediting_790099	chr10_131970013_-	131970007:131970029	3SS	0+4i	TTTTTGTATTTTTAATAGAGACG	-4.91	TTTTTGTATTTTTAATGGAGACG	-4.44
IR	CAediting_790099	chr10_131970013_-	131970009:131970031	3SS	0+2i	AATTTTTGTATTTTTAATAGAGA	5.24	AATTTTTGTATTTTTAATGGAGA	-2.71
IR	CAediting_790100	chr10_131970030_-	131970009:131970031	3SS	0+19i	AATTTTTGTATTTTTAATAGAGA	5.24	AGTTTTTGTATTTTTAATAGAGA	4.76
IR	CAediting_790101	chr10_131970031_-	131970009:131970031	3SS	0+20i	AATTTTTGTATTTTTAATAGAGA	5.24	GATTTTTGTATTTTTAATAGAGA	5.45

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000176171.10.BNIP3.

Correlation between RNA A-to-I editing and PSI for ENSG00000176171.10.BNIP3.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for BNIP3

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for BNIP3

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for BNIP3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_790042	chr10_131966648_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3136-3p	131966645	131966651	7mer-m8	131966644	131966665	147.00	-14.49
CAediting_790042	chr10_131966648_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6724-5p	131966643	131966649	7mer-m8	131966642	131966663	149.00	-27.15
CAediting_790042	chr10_131966648_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6724-5p	131966643	131966649	7mer-m8	131966642	131966663	149.00	-27.15
CAediting_790042	chr10_131966648_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6724-5p	131966643	131966649	7mer-m8	131966642	131966663	149.00	-27.15
CAediting_790042	chr10_131966648_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6724-5p	131966643	131966649	7mer-m8	131966642	131966663	149.00	-27.15
CAediting_790042	chr10_131966648_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6773-5p	131966643	131966649	7mer-m8	131966642	131966664	153.00	-24.00
CAediting_790042	chr10_131966648_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6814-5p	131966647	131966653	7mer-m8	131966646	131966666	150.00	-27.92
CAediting_790042	chr10_131966648_-	ENSG00000176171.10	ENST00000368636	hsa-miR-7155-3p	131966645	131966651	7mer-m8	131966644	131966665	148.00	-22.61
CAediting_790044	chr10_131966679_-	ENSG00000176171.10	ENST00000368636	hsa-miR-1207-3p	131966679	131966685	7mer-m8	131966678	131966696	145.00	-13.29
CAediting_790044	chr10_131966679_-	ENSG00000176171.10	ENST00000368636	hsa-miR-646	131966677	131966683	7mer-m8	131966676	131966695	148.00	-21.14
CAediting_790046	chr10_131966689_-	ENSG00000176171.10	ENST00000368636	hsa-miR-128-1-5p	131966683	131966689	7mer-1a	131966683	131966705	141.00	-22.88
CAediting_790046	chr10_131966689_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6762-5p	131966683	131966690	8mer-1a	131966683	131966705	147.00	-22.28
CAediting_790046	chr10_131966689_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6845-5p	131966683	131966690	8mer-1a	131966683	131966701	148.00	-18.19
CAediting_790055	chr10_131966750_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4659a-5p	131966746	131966753	8mer-1a	131966746	131966768	142.00	-13.87
CAediting_790055	chr10_131966750_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4659b-5p	131966746	131966753	8mer-1a	131966746	131966765	142.00	-15.47
CAediting_790055	chr10_131966750_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4776-3p	131966746	131966752	7mer-m8	131966745	131966769	159.00	-23.72
CAediting_790055	chr10_131966750_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4776-3p	131966746	131966752	7mer-m8	131966745	131966769	159.00	-23.72
CAediting_790036	chr10_131966595_-	ENSG00000176171.10	ENST00000368636	hsa-miR-1976	131966592	131966598	7mer-m8	131966591	131966612	143.00	-18.01
CAediting_790036	chr10_131966595_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6772-3p	131966589	131966596	8mer-1a	131966589	131966609	159.00	-25.59
CAediting_790045	chr10_131966683_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4508	131966683	131966689	7mer-m8	131966682	131966698	143.00	-19.30
CAediting_790045	chr10_131966683_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6784-5p	131966682	131966688	7mer-m8	131966681	131966700	166.00	-32.27
CAediting_790049	chr10_131966719_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6844	131966718	131966724	7mer-m8	131966717	131966737	152.00	-7.49
CAediting_790050	chr10_131966720_-	ENSG00000176171.10	ENST00000368636	hsa-miR-578	131966718	131966724	7mer-m8	131966717	131966737	145.00	-7.69
CAediting_790050	chr10_131966720_-	ENSG00000176171.10	ENST00000368636	hsa-miR-643	131966719	131966726	8mer-1a	131966719	131966740	140.00	-10.49
CAediting_790051	chr10_131966721_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4742-3p	131966720	131966727	8mer-1a	131966720	131966742	142.00	-10.99
CAediting_790052	chr10_131966724_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3680-3p	131966719	131966726	8mer-1a	131966719	131966741	140.00	-13.83
CAediting_790052	chr10_131966724_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3680-3p	131966719	131966726	8mer-1a	131966719	131966741	140.00	-13.83
CAediting_790060	chr10_131966776_-	ENSG00000176171.10	ENST00000368636	hsa-miR-330-5p	131966776	131966781	6mer	131966775	131966797	153.00	-25.07
CAediting_790060	chr10_131966776_-	ENSG00000176171.10	ENST00000368636	hsa-miR-518c-5p	131966776	131966782	7mer-m8	131966775	131966800	144.00	-21.62
CAediting_790061	chr10_131966785_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4636	131966782	131966788	7mer-m8	131966781	131966802	147.00	-17.16
CAediting_790062	chr10_131966796_-	ENSG00000176171.10	ENST00000368636	hsa-miR-1224-3p	131966793	131966800	8mer-1a	131966793	131966812	156.00	-26.75
CAediting_790062	chr10_131966796_-	ENSG00000176171.10	ENST00000368636	hsa-miR-1260a	131966793	131966799	7mer-m8	131966792	131966809	164.00	-28.81
CAediting_790062	chr10_131966796_-	ENSG00000176171.10	ENST00000368636	hsa-miR-1260b	131966793	131966799	7mer-m8	131966792	131966810	161.00	-23.52
CAediting_790064	chr10_131966822_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3672	131966816	131966823	8mer-1a	131966816	131966842	150.00	-15.48
CAediting_790064	chr10_131966822_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6864-3p	131966816	131966823	8mer-1a	131966816	131966836	142.00	-10.97
CAediting_790065	chr10_131966823_-	ENSG00000176171.10	ENST00000368636	hsa-miR-513a-5p	131966822	131966828	7mer-m8	131966821	131966839	151.00	-20.44
CAediting_790065	chr10_131966823_-	ENSG00000176171.10	ENST00000368636	hsa-miR-513a-5p	131966822	131966828	7mer-m8	131966821	131966839	151.00	-20.44
CAediting_790067	chr10_131966920_-	ENSG00000176171.10	ENST00000368636	hsa-miR-361-3p	131966919	131966925	7mer-m8	131966918	131966940	153.00	-23.92
CAediting_790068	chr10_131966928_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4743-5p	131966925	131966931	7mer-m8	131966924	131966943	147.00	-26.34
CAediting_790070	chr10_131966970_-	ENSG00000176171.10	ENST00000368636	hsa-miR-18a-3p	131966964	131966971	8mer-1a	131966964	131966986	153.00	-22.38
CAediting_790070	chr10_131966970_-	ENSG00000176171.10	ENST00000368636	hsa-miR-2276-5p	131966968	131966974	7mer-m8	131966967	131966988	143.00	-21.69
CAediting_790070	chr10_131966970_-	ENSG00000176171.10	ENST00000368636	hsa-miR-326	131966970	131966976	7mer-m8	131966969	131966985	143.00	-23.67
CAediting_790070	chr10_131966970_-	ENSG00000176171.10	ENST00000368636	hsa-miR-330-5p	131966970	131966976	7mer-m8	131966969	131966994	148.00	-25.91
CAediting_790072	chr10_131966987_-	ENSG00000176171.10	ENST00000368636	hsa-miR-660-3p	131966986	131966993	8mer-1a	131966986	131967005	144.00	-16.11
CAediting_790073	chr10_131966989_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6752-3p	131966989	131966995	7mer-m8	131966988	131967007	157.00	-30.29
CAediting_790073	chr10_131966989_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6801-3p	131966987	131966994	8mer-1a	131966987	131967006	148.00	-22.90
CAediting_790073	chr10_131966989_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6810-3p	131966987	131966994	8mer-1a	131966987	131967009	151.00	-28.60
CAediting_790077	chr10_131967018_-	ENSG00000176171.10	ENST00000368636	hsa-miR-8052	131967013	131967019	7mer-1a	131967013	131967033	141.00	-25.19
CAediting_790078	chr10_131967019_-	ENSG00000176171.10	ENST00000368636	hsa-miR-513a-5p	131967018	131967024	7mer-m8	131967017	131967034	160.00	-23.52
CAediting_790078	chr10_131967019_-	ENSG00000176171.10	ENST00000368636	hsa-miR-513a-5p	131967018	131967024	7mer-m8	131967017	131967034	160.00	-23.52
CAediting_790078	chr10_131967019_-	ENSG00000176171.10	ENST00000368636	hsa-miR-638	131967013	131967019	7mer-1a	131967013	131967037	161.00	-35.82
CAediting_790083	chr10_131967063_-	ENSG00000176171.10	ENST00000368636	hsa-miR-361-5p	131967059	131967066	8mer-1a	131967059	131967076	143.00	-18.24
CAediting_790083	chr10_131967063_-	ENSG00000176171.10	ENST00000368636	hsa-miR-374a-3p	131967058	131967065	8mer-1a	131967058	131967079	145.00	-8.35
CAediting_790085	chr10_131967082_-	ENSG00000176171.10	ENST00000368636	hsa-miR-1306-3p	131967082	131967088	7mer-m8	131967081	131967097	144.00	-18.42
CAediting_790086	chr10_131967084_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3190-5p	131967084	131967090	7mer-m8	131967083	131967102	149.00	-19.72
CAediting_790087	chr10_131967107_-	ENSG00000176171.10	ENST00000368636	hsa-miR-508-5p	131967104	131967110	7mer-m8	131967103	131967124	159.00	-26.48
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-518a-3p	131967135	131967141	7mer-m8	131967134	131967155	145.00	-17.15
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-518a-3p	131967135	131967141	7mer-m8	131967134	131967155	145.00	-17.15
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-518b	131967135	131967141	7mer-m8	131967134	131967154	146.00	-21.79
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-518c-3p	131967135	131967141	7mer-m8	131967134	131967155	146.00	-18.98
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-518d-3p	131967135	131967141	7mer-m8	131967134	131967154	145.00	-17.84
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-518e-3p	131967136	131967142	7mer-m8	131967135	131967156	144.00	-18.65
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-518f-3p	131967135	131967141	7mer-m8	131967134	131967154	145.00	-17.48
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-526a-3p	131967135	131967141	7mer-m8	131967134	131967154	146.00	-17.71
CAediting_790089	chr10_131967147_-	ENSG00000176171.10	ENST00000368636	hsa-miR-8052	131967142	131967148	7mer-1a	131967142	131967160	140.00	-24.15
CAediting_790090	chr10_131967148_-	ENSG00000176171.10	ENST00000368636	hsa-miR-513a-5p	131967147	131967153	7mer-m8	131967146	131967163	144.00	-16.68
CAediting_790090	chr10_131967148_-	ENSG00000176171.10	ENST00000368636	hsa-miR-513a-5p	131967147	131967153	7mer-m8	131967146	131967163	144.00	-16.68
CAediting_790090	chr10_131967148_-	ENSG00000176171.10	ENST00000368636	hsa-miR-638	131967142	131967148	7mer-1a	131967142	131967166	157.00	-32.92
CAediting_790094	chr10_131969932_-	ENSG00000176171.10	ENST00000540159	hsa-miR-106a-3p	131969930	131969935	6mer	131969929	131969950	141.00	-21.13
CAediting_790096	chr10_131969987_-	ENSG00000176171.10	ENST00000540159	hsa-miR-3940-3p	131969983	131969989	7mer-m8	131969982	131970003	140.00	-20.94
CAediting_790096	chr10_131969987_-	ENSG00000176171.10	ENST00000540159	hsa-miR-7112-5p	131969987	131969992	6mer	131969986	131970007	140.00	-23.80
CAediting_790098	chr10_131970011_-	ENSG00000176171.10	ENST00000540159	hsa-miR-6883-3p	131970009	131970015	7mer-m8	131970008	131970029	140.00	-8.92
CAediting_790102	chr10_131970096_-	ENSG00000176171.10	ENST00000540159	hsa-miR-6078	131970092	131970099	8mer-1a	131970092	131970111	148.00	-20.42
CAediting_790104	chr10_131970152_-	ENSG00000176171.10	ENST00000540159	hsa-miR-3940-3p	131970148	131970154	7mer-m8	131970147	131970168	143.00	-21.15
CAediting_790039	chr10_131966634_-	ENSG00000176171.10	ENST00000368636	hsa-miR-12113	131966634	131966640	7mer-m8	131966633	131966651	152.00	-21.73
CAediting_790039	chr10_131966634_-	ENSG00000176171.10	ENST00000368636	hsa-miR-345-3p	131966632	131966638	7mer-m8	131966631	131966654	151.00	-28.83
CAediting_790039	chr10_131966634_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4539	131966634	131966640	7mer-m8	131966633	131966652	151.00	-20.09
CAediting_790039	chr10_131966634_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6779-3p	131966630	131966636	7mer-m8	131966629	131966650	153.00	-22.47
CAediting_790039	chr10_131966634_-	ENSG00000176171.10	ENST00000368636	hsa-miR-7976	131966631	131966637	7mer-m8	131966630	131966647	158.00	-21.01
CAediting_790043	chr10_131966666_-	ENSG00000176171.10	ENST00000368636	hsa-miR-1913	131966661	131966667	7mer-m8	131966660	131966682	143.00	-22.90
CAediting_790059	chr10_131966768_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3176	131966764	131966770	7mer-m8	131966763	131966781	160.00	-23.59
CAediting_790059	chr10_131966768_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3922-3p	131966764	131966770	7mer-m8	131966763	131966788	160.00	-24.36
CAediting_790059	chr10_131966768_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6878-3p	131966765	131966771	7mer-m8	131966764	131966784	152.00	-20.59
CAediting_790075	chr10_131966996_-	ENSG00000176171.10	ENST00000368636	hsa-miR-1913	131966991	131966997	7mer-m8	131966990	131967011	147.00	-22.10
CAediting_790075	chr10_131966996_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6849-3p	131966996	131967002	7mer-m8	131966995	131967016	140.00	-18.03
CAediting_790080	chr10_131967049_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6844	131967048	131967053	6mer	131967047	131967068	147.00	-7.65
CAediting_790081	chr10_131967051_-	ENSG00000176171.10	ENST00000368636	hsa-miR-20a-3p	131967050	131967057	8mer-1a	131967050	131967071	144.00	-9.91
CAediting_790081	chr10_131967051_-	ENSG00000176171.10	ENST00000368636	hsa-miR-544a	131967048	131967055	8mer-1a	131967048	131967069	170.00	-16.21
CAediting_790091	chr10_131967156_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4634	131967152	131967158	7mer-m8	131967151	131967174	151.00	-32.12
CAediting_790099	chr10_131970013_-	ENSG00000176171.10	ENST00000540159	hsa-miR-136-5p	131970009	131970016	8mer-1a	131970009	131970031	140.00	-9.33
CAediting_790100	chr10_131970030_-	ENSG00000176171.10	ENST00000540159	hsa-miR-548ae-3p	131970025	131970031	7mer-m8	131970024	131970045	144.00	-12.52
CAediting_790100	chr10_131970030_-	ENSG00000176171.10	ENST00000540159	hsa-miR-548ae-3p	131970025	131970031	7mer-m8	131970024	131970045	144.00	-12.52
CAediting_790100	chr10_131970030_-	ENSG00000176171.10	ENST00000540159	hsa-miR-548ah-3p	131970025	131970031	7mer-m8	131970024	131970043	145.00	-13.52
CAediting_790100	chr10_131970030_-	ENSG00000176171.10	ENST00000540159	hsa-miR-548aj-3p	131970025	131970031	7mer-m8	131970024	131970045	144.00	-10.41
CAediting_790100	chr10_131970030_-	ENSG00000176171.10	ENST00000540159	hsa-miR-548aj-3p	131970025	131970031	7mer-m8	131970024	131970045	144.00	-10.41
CAediting_790100	chr10_131970030_-	ENSG00000176171.10	ENST00000540159	hsa-miR-548am-3p	131970025	131970031	7mer-m8	131970024	131970043	145.00	-13.25
CAediting_790100	chr10_131970030_-	ENSG00000176171.10	ENST00000540159	hsa-miR-548aq-3p	131970025	131970031	7mer-m8	131970024	131970046	144.00	-12.90
CAediting_790100	chr10_131970030_-	ENSG00000176171.10	ENST00000540159	hsa-miR-548j-3p	131970025	131970031	7mer-m8	131970024	131970044	141.00	-12.52
CAediting_790100	chr10_131970030_-	ENSG00000176171.10	ENST00000540159	hsa-miR-548x-3p	131970025	131970031	7mer-m8	131970024	131970044	144.00	-10.41
CAediting_790100	chr10_131970030_-	ENSG00000176171.10	ENST00000540159	hsa-miR-548x-3p	131970025	131970031	7mer-m8	131970024	131970044	144.00	-10.41
CAediting_790100	chr10_131970030_-	ENSG00000176171.10	ENST00000540159	hsa-miR-7844-5p	131970027	131970033	7mer-m8	131970026	131970050	157.00	-22.41
CAediting_790101	chr10_131970031_-	ENSG00000176171.10	ENST00000540159	hsa-miR-3157-5p	131970030	131970036	7mer-m8	131970029	131970051	163.00	-23.92
CAediting_790101	chr10_131970031_-	ENSG00000176171.10	ENST00000540159	hsa-miR-34a-3p	131970028	131970034	7mer-m8	131970027	131970048	147.00	-12.59

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_790089	chr10_131967147_-	ENSG00000176171.10	ENST00000368636	hsa-miR-10399-5p	131967146	131967152	7mer-m8	131967145	131967166	144	-10.39
CAediting_790090	chr10_131967148_-	ENSG00000176171.10	ENST00000368636	hsa-miR-10399-5p	131967146	131967152	7mer-m8	131967145	131967166	144	-10.39
CAediting_790077	chr10_131967018_-	ENSG00000176171.10	ENST00000368636	hsa-miR-10399-5p	131967017	131967023	7mer-m8	131967016	131967037	148	-12.38
CAediting_790078	chr10_131967019_-	ENSG00000176171.10	ENST00000368636	hsa-miR-10399-5p	131967017	131967023	7mer-m8	131967016	131967037	148	-12.38
CAediting_790064	chr10_131966822_-	ENSG00000176171.10	ENST00000368636	hsa-miR-10399-5p	131966821	131966827	7mer-m8	131966820	131966841	143	-10.38
CAediting_790065	chr10_131966823_-	ENSG00000176171.10	ENST00000368636	hsa-miR-10399-5p	131966821	131966827	7mer-m8	131966820	131966841	143	-10.38
CAediting_790041	chr10_131966643_-	ENSG00000176171.10	ENST00000368636	hsa-miR-10400-3p	131966643	131966649	7mer-m8	131966642	131966663	144	-22.82
CAediting_790042	chr10_131966648_-	ENSG00000176171.10	ENST00000368636	hsa-miR-10400-3p	131966643	131966649	7mer-m8	131966642	131966663	144	-22.82
CAediting_790063	chr10_131966814_-	ENSG00000176171.10	ENST00000368636	hsa-miR-106a-5p	131966810	131966815	6mer	131966809	131966831	145	-15.84
CAediting_790063	chr10_131966814_-	ENSG00000176171.10	ENST00000368636	hsa-miR-106b-5p	131966810	131966815	6mer	131966809	131966829	143	-16.4
CAediting_790070	chr10_131966970_-	ENSG00000176171.10	ENST00000368636	hsa-miR-1237-3p	131966968	131966974	7mer-m8	131966967	131966989	142	-16.34
CAediting_790071	chr10_131966973_-	ENSG00000176171.10	ENST00000368636	hsa-miR-1237-3p	131966968	131966974	7mer-m8	131966967	131966989	142	-16.34
CAediting_790080	chr10_131967049_-	ENSG00000176171.10	ENST00000368636	hsa-miR-129-5p	131967048	131967054	7mer-m8	131967047	131967067	145	-6.69
CAediting_790081	chr10_131967051_-	ENSG00000176171.10	ENST00000368636	hsa-miR-129-5p	131967048	131967054	7mer-m8	131967047	131967067	145	-6.69
CAediting_790080	chr10_131967049_-	ENSG00000176171.10	ENST00000368636	hsa-miR-129-5p	131967048	131967054	7mer-m8	131967047	131967067	145	-6.69
CAediting_790081	chr10_131967051_-	ENSG00000176171.10	ENST00000368636	hsa-miR-129-5p	131967048	131967054	7mer-m8	131967047	131967067	145	-6.69
CAediting_790041	chr10_131966643_-	ENSG00000176171.10	ENST00000368636	hsa-miR-1343-3p	131966640	131966646	7mer-m8	131966639	131966662	143	-22.04
CAediting_790063	chr10_131966814_-	ENSG00000176171.10	ENST00000368636	hsa-miR-17-5p	131966810	131966815	6mer	131966809	131966831	145	-20.08
CAediting_790053	chr10_131966746_-	ENSG00000176171.10	ENST00000368636	hsa-miR-193a-5p	131966741	131966747	7mer-m8	131966740	131966760	141	-16.05
CAediting_790084	chr10_131967075_-	ENSG00000176171.10	ENST00000368636	hsa-miR-193b-5p	131967070	131967076	7mer-m8	131967069	131967090	142	-20.42
CAediting_790073	chr10_131966989_-	ENSG00000176171.10	ENST00000368636	hsa-miR-1976	131966987	131966994	8mer-1a	131966987	131967007	149	-21.37
CAediting_790074	chr10_131966992_-	ENSG00000176171.10	ENST00000368636	hsa-miR-1976	131966987	131966994	8mer-1a	131966987	131967007	149	-21.37
CAediting_790063	chr10_131966814_-	ENSG00000176171.10	ENST00000368636	hsa-miR-20a-5p	131966810	131966815	6mer	131966809	131966831	145	-17.97
CAediting_790063	chr10_131966814_-	ENSG00000176171.10	ENST00000368636	hsa-miR-20b-5p	131966810	131966815	6mer	131966809	131966831	145	-20.08
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-302a-3p	131967136	131967142	7mer-m8	131967135	131967156	143	-14.98
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-302b-3p	131967136	131967142	7mer-m8	131967135	131967157	141	-9.83
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-302c-3p	131967136	131967142	7mer-m8	131967135	131967155	145	-11.96
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-302d-3p	131967136	131967142	7mer-m8	131967135	131967162	148	-13.74
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-302e	131967136	131967142	7mer-m8	131967135	131967151	141	-8.62
CAediting_790055	chr10_131966750_-	ENSG00000176171.10	ENST00000368636	hsa-miR-31-3p	131966747	131966754	8mer-1a	131966747	131966770	141	-15.85
CAediting_790056	chr10_131966752_-	ENSG00000176171.10	ENST00000368636	hsa-miR-31-3p	131966747	131966754	8mer-1a	131966747	131966770	141	-15.85
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3609	131967135	131967140	6mer	131967134	131967156	140	-19
CAediting_790063	chr10_131966814_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3609	131966810	131966815	6mer	131966809	131966831	143	-22.64
CAediting_790068	chr10_131966928_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3652	131966925	131966931	7mer-m8	131966924	131966943	148	-20.61
CAediting_790058	chr10_131966765_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3663-5p	131966764	131966770	7mer-m8	131966763	131966782	148	-22.14
CAediting_790059	chr10_131966768_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3663-5p	131966764	131966770	7mer-m8	131966763	131966782	148	-22.14
CAediting_790081	chr10_131967051_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3680-3p	131967049	131967056	8mer-1a	131967049	131967071	143	-14.25
CAediting_790081	chr10_131967051_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3680-3p	131967049	131967056	8mer-1a	131967049	131967071	143	-14.25
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-372-3p	131967136	131967142	7mer-m8	131967135	131967162	155	-20.46
CAediting_790066	chr10_131966829_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3911	131966828	131966834	7mer-m8	131966827	131966848	147	-16.79
CAediting_790066	chr10_131966829_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3934-5p	131966825	131966831	7mer-m8	131966824	131966845	155	-22.3
CAediting_790047	chr10_131966715_-	ENSG00000176171.10	ENST00000368636	hsa-miR-3975	131966710	131966716	7mer-m8	131966709	131966730	150	-15.42
CAediting_790092	chr10_131967164_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4252	131967159	131967165	7mer-m8	131967158	131967176	150	-20.59
CAediting_790043	chr10_131966666_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4264	131966665	131966671	7mer-m8	131966664	131966680	140	-12.18
CAediting_790053	chr10_131966746_-	ENSG00000176171.10	ENST00000368636	hsa-miR-431-5p	131966743	131966749	7mer-m8	131966742	131966765	145	-18.18
CAediting_790054	chr10_131966747_-	ENSG00000176171.10	ENST00000368636	hsa-miR-431-5p	131966743	131966749	7mer-m8	131966742	131966765	145	-18.18
CAediting_790042	chr10_131966648_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4437	131966643	131966650	8mer-1a	131966643	131966663	153	-22.11
CAediting_790067	chr10_131966920_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4469	131966914	131966921	8mer-1a	131966914	131966935	152	-22.11
CAediting_790046	chr10_131966689_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4489	131966683	131966690	8mer-1a	131966683	131966703	146	-20.39
CAediting_790041	chr10_131966643_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4674	131966643	131966649	7mer-m8	131966642	131966664	148	-24.09
CAediting_790042	chr10_131966648_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4674	131966643	131966649	7mer-m8	131966642	131966664	148	-24.09
CAediting_790067	chr10_131966920_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4685-3p	131966914	131966920	7mer-1a	131966914	131966934	144	-27.04
CAediting_790079	chr10_131967045_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4735-5p	131967044	131967050	7mer-m8	131967043	131967064	145	-4.89
CAediting_790080	chr10_131967049_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4735-5p	131967044	131967050	7mer-m8	131967043	131967064	145	-4.89
CAediting_790047	chr10_131966715_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4735-5p	131966714	131966720	7mer-m8	131966713	131966734	140	-4.7
CAediting_790048	chr10_131966718_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4735-5p	131966714	131966720	7mer-m8	131966713	131966734	140	-4.7
CAediting_790049	chr10_131966719_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4735-5p	131966714	131966720	7mer-m8	131966713	131966734	140	-4.7
CAediting_790079	chr10_131967045_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4775	131967045	131967051	7mer-m8	131967044	131967066	155	-4.7
CAediting_790080	chr10_131967049_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4775	131967045	131967051	7mer-m8	131967044	131967066	155	-4.7
CAediting_790062	chr10_131966796_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4777-3p	131966796	131966802	7mer-m8	131966795	131966820	151	-15.54
CAediting_790085	chr10_131967082_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4781-3p	131967081	131967087	7mer-m8	131967080	131967098	144	-15.58
CAediting_790086	chr10_131967084_-	ENSG00000176171.10	ENST00000368636	hsa-miR-4781-3p	131967081	131967087	7mer-m8	131967080	131967098	144	-15.58
CAediting_790089	chr10_131967147_-	ENSG00000176171.10	ENST00000368636	hsa-miR-5089-5p	131967142	131967148	7mer-m8	131967141	131967163	148	-14.13
CAediting_790076	chr10_131967013_-	ENSG00000176171.10	ENST00000368636	hsa-miR-5089-5p	131967013	131967019	7mer-m8	131967012	131967031	146	-12.33
CAediting_790077	chr10_131967018_-	ENSG00000176171.10	ENST00000368636	hsa-miR-5089-5p	131967013	131967019	7mer-m8	131967012	131967031	146	-12.33
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-512-3p	131967137	131967143	7mer-m8	131967136	131967157	149	-15.51
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-512-3p	131967137	131967143	7mer-m8	131967136	131967157	149	-15.51
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-519d-3p	131967135	131967141	7mer-m8	131967134	131967154	146	-14.53
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-520a-3p	131967136	131967142	7mer-m8	131967135	131967156	140	-11.03
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-520b-3p	131967136	131967142	7mer-m8	131967135	131967154	141	-16.52
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-520c-3p	131967136	131967142	7mer-m8	131967135	131967155	146	-16.52
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-520d-3p	131967136	131967142	7mer-m8	131967135	131967156	140	-15.12
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-520e-3p	131967136	131967142	7mer-m8	131967135	131967155	140	-13.32
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-520g-3p	131967134	131967140	7mer-m8	131967133	131967155	151	-16.77
CAediting_790063	chr10_131966814_-	ENSG00000176171.10	ENST00000368636	hsa-miR-520g-3p	131966809	131966815	7mer-m8	131966808	131966830	151	-12.59
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-520h	131967134	131967140	7mer-m8	131967133	131967154	150	-15.08
CAediting_790063	chr10_131966814_-	ENSG00000176171.10	ENST00000368636	hsa-miR-520h	131966809	131966815	7mer-m8	131966808	131966828	146	-10.35
CAediting_790088	chr10_131967139_-	ENSG00000176171.10	ENST00000368636	hsa-miR-526b-3p	131967135	131967141	7mer-m8	131967134	131967154	146	-16.66
CAediting_790046	chr10_131966689_-	ENSG00000176171.10	ENST00000368636	hsa-miR-548v	131966687	131966693	7mer-m8	131966686	131966706	146	-16.47
CAediting_790066	chr10_131966829_-	ENSG00000176171.10	ENST00000368636	hsa-miR-552-3p	131966823	131966830	8mer-1a	131966823	131966843	144	-15.35
CAediting_790044	chr10_131966679_-	ENSG00000176171.10	ENST00000368636	hsa-miR-562	131966676	131966682	7mer-m8	131966675	131966694	150	-12.65
CAediting_790044	chr10_131966679_-	ENSG00000176171.10	ENST00000368636	hsa-miR-5697	131966675	131966681	7mer-m8	131966674	131966695	146	-16.89
CAediting_790068	chr10_131966928_-	ENSG00000176171.10	ENST00000368636	hsa-miR-5787	131966925	131966930	6mer	131966924	131966943	144	-27.69
CAediting_790058	chr10_131966765_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6131	131966763	131966769	7mer-m8	131966762	131966780	140	-18.33
CAediting_790059	chr10_131966768_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6131	131966763	131966769	7mer-m8	131966762	131966780	140	-18.33
CAediting_790089	chr10_131967147_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6504-3p	131967146	131967152	7mer-m8	131967145	131967166	152	-15.11
CAediting_790090	chr10_131967148_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6504-3p	131967146	131967152	7mer-m8	131967145	131967166	152	-15.11
CAediting_790064	chr10_131966822_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6504-3p	131966821	131966827	7mer-m8	131966820	131966842	145	-14.07
CAediting_790065	chr10_131966823_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6504-3p	131966821	131966827	7mer-m8	131966820	131966842	145	-14.07
CAediting_790076	chr10_131967013_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6506-5p	131967012	131967018	7mer-m8	131967011	131967032	147	-16.09
CAediting_790092	chr10_131967164_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6529-3p	131967163	131967169	7mer-m8	131967162	131967183	141	-14.07
CAediting_790093	chr10_131967166_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6529-3p	131967163	131967169	7mer-m8	131967162	131967183	141	-14.07
CAediting_790074	chr10_131966992_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6747-3p	131966989	131966996	8mer-1a	131966989	131967010	150	-24.11
CAediting_790041	chr10_131966643_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6783-3p	131966640	131966646	7mer-m8	131966639	131966660	151	-25.03
CAediting_790091	chr10_131967156_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6807-5p	131967156	131967162	7mer-m8	131967155	131967177	148	-25.16
CAediting_790058	chr10_131966765_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6843-3p	131966765	131966771	7mer-m8	131966764	131966783	152	-16.51
CAediting_790059	chr10_131966768_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6843-3p	131966765	131966771	7mer-m8	131966764	131966783	152	-16.51
CAediting_790058	chr10_131966765_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6848-3p	131966765	131966771	7mer-m8	131966764	131966782	140	-14.29
CAediting_790059	chr10_131966768_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6848-3p	131966765	131966771	7mer-m8	131966764	131966782	140	-14.29
CAediting_790092	chr10_131967164_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6889-3p	131967163	131967169	7mer-m8	131967162	131967181	145	-19.06
CAediting_790093	chr10_131967166_-	ENSG00000176171.10	ENST00000368636	hsa-miR-6889-3p	131967163	131967169	7mer-m8	131967162	131967181	145	-19.06
CAediting_790090	chr10_131967148_-	ENSG00000176171.10	ENST00000368636	hsa-miR-7151-3p	131967147	131967154	8mer-1a	131967147	131967171	145	-18.74
CAediting_790078	chr10_131967019_-	ENSG00000176171.10	ENST00000368636	hsa-miR-7151-3p	131967018	131967025	8mer-1a	131967018	131967042	141	-20.66
CAediting_790041	chr10_131966643_-	ENSG00000176171.10	ENST00000368636	hsa-miR-939-3p	131966640	131966647	8mer-1a	131966640	131966659	141	-18.1
CAediting_790080	chr10_131967049_-	ENSG00000176171.10	ENST00000368636	hsa-miR-9983-3p	131967048	131967054	7mer-m8	131967047	131967068	140	-4.87
CAediting_790081	chr10_131967051_-	ENSG00000176171.10	ENST00000368636	hsa-miR-9983-3p	131967048	131967054	7mer-m8	131967047	131967068	140	-4.87
CAediting_790103	chr10_131970122_-	ENSG00000176171.10	ENST00000540159	hsa-miR-3174	131970120	131970125	6mer	131970119	131970139	142	-25.66
CAediting_790098	chr10_131970011_-	ENSG00000176171.10	ENST00000540159	hsa-miR-340-3p	131970006	131970012	7mer-m8	131970005	131970026	153	-18.07
CAediting_790104	chr10_131970152_-	ENSG00000176171.10	ENST00000540159	hsa-miR-5189-5p	131970151	131970157	7mer-m8	131970150	131970175	152	-26.22
CAediting_790096	chr10_131969987_-	ENSG00000176171.10	ENST00000540159	hsa-miR-5189-5p	131969986	131969992	7mer-m8	131969985	131970010	150	-25.23
CAediting_790104	chr10_131970152_-	ENSG00000176171.10	ENST00000540159	hsa-miR-612	131970151	131970157	7mer-m8	131970150	131970175	149	-21.21
CAediting_790104	chr10_131970152_-	ENSG00000176171.10	ENST00000540159	hsa-miR-661	131970149	131970155	7mer-m8	131970148	131970171	143	-21.35
CAediting_790096	chr10_131969987_-	ENSG00000176171.10	ENST00000540159	hsa-miR-661	131969984	131969990	7mer-m8	131969983	131970007	151	-26.25
CAediting_790098	chr10_131970011_-	ENSG00000176171.10	ENST00000540159	hsa-miR-6827-3p	131970006	131970012	7mer-m8	131970005	131970025	145	-16.55
CAediting_790104	chr10_131970152_-	ENSG00000176171.10	ENST00000540159	hsa-miR-6860	131970151	131970157	7mer-m8	131970150	131970169	145	-20.24
CAediting_790104	chr10_131970152_-	ENSG00000176171.10	ENST00000540159	hsa-miR-939-3p	131970150	131970156	7mer-m8	131970149	131970169	140	-15.63
CAediting_790096	chr10_131969987_-	ENSG00000176171.10	ENST00000540159	hsa-miR-939-3p	131969985	131969991	7mer-m8	131969984	131970004	140	-15.63

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000176171.10	ENST00000368636	hsa-miR-624-3p	131966738	131966744	7mer-m8	131966737	131966757	164	-17.08
CAediting_980496	chr14_31014685_-	ENSG00000176171.10	ENST00000368636	hsa-miR-624-3p	131966581	131966587	7mer-m8	131966580	131966600	163	-14.33
CAediting_980496	chr14_31014685_-	ENSG00000176171.10	ENST00000540159	hsa-miR-624-3p	131968636	131968642	7mer-m8	131968635	131968655	145	-13.69
CAediting_393	chr1_1167164_+	ENSG00000176171.10	ENST00000540159	hsa-miR-200b-3p	131968817	131968823	7mer-m8	131968816	131968837	140	-8.71
CAediting_1160181	chr17_7017644_-	ENSG00000176171.10	ENST00000368636	hsa-miR-195-3p	131968137	131968144	8mer-1a	131968137	131968158	149	-9.44
CAediting_228905	chr2_188297554_+	ENSG00000176171.10	ENST00000368636	hsa-miR-561-3p	131967932	131967938	7mer-m8	131967931	131967952	145	-10.24
CAediting_1054808	chr15_66496985_-	ENSG00000176171.10	ENST00000540159	hsa-miR-4512	131970451	131970458	8mer-1a	131970451	131970472	140	-16.99
CAediting_1229415	chr17_67471547_+	ENSG00000176171.10	ENST00000540159	hsa-miR-548aa	131969528	131969534	7mer-m8	131969527	131969551	147	-13.88
CAediting_1229415	chr17_67471547_+	ENSG00000176171.10	ENST00000540159	hsa-miR-548aa	131968924	131968930	7mer-m8	131968923	131968945	150	-9.65
CAediting_1351755	chr19_40282625_-	ENSG00000176171.10	ENST00000540159	hsa-miR-641	131969556	131969561	6mer	131969555	131969578	141	-17.42
CAediting_1368054	chr19_46709310_-	ENSG00000176171.10	ENST00000540159	hsa-miR-320e	131970284	131970290	7mer-m8	131970283	131970300	150	-19.8
CAediting_77128	chr1_85133844_+	ENSG00000176171.10	ENST00000540159	hsa-miR-4423-3p	131969151	131969157	7mer-m8	131969150	131969170	140	-14.2
CAediting_77128	chr1_85133844_+	ENSG00000176171.10	ENST00000540159	hsa-miR-4423-3p	131970047	131970053	7mer-m8	131970046	131970066	148	-16.18
CAediting_414656	chr5_72878640_+	ENSG00000176171.10	ENST00000540159	hsa-miR-4804-3p	131969383	131969390	8mer-1a	131969383	131969403	141	-13.52
CAediting_468389	chr6_31355314_-	ENSG00000176171.10	ENST00000540159	hsa-miR-6891-5p	131969080	131969086	7mer-m8	131969079	131969098	144	-25.88
CAediting_468389	chr6_31355314_-	ENSG00000176171.10	ENST00000540159	hsa-miR-6891-5p	131969778	131969783	6mer	131969774	131969792	146	-22.21
CAediting_468389	chr6_31355314_-	ENSG00000176171.10	ENST00000540159	hsa-miR-6891-5p	131969775	131969781	7mer-m8	131969774	131969792	146	-22.21
CAediting_1524209	chrX_134546392_-	ENSG00000176171.10	ENST00000540159	hsa-miR-503-5p	131969564	131969570	7mer-m8	131969563	131969584	146	-21.79

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1160181	chr17_7017644_-	ENSG00000176171.10	ENST00000368636	hsa-miR-195-3p	131968093	131968099	7mer-m8	131968092	131968113	147	-5.39
CAediting_228905	chr2_188297554_+	ENSG00000176171.10	ENST00000368636	hsa-miR-561-3p	131967582	131967588	7mer-m8	131967581	131967602	140	-4.19
CAediting_846604	chr11_93733708_-	ENSG00000176171.10	ENST00000540159	hsa-miR-1304-3p	131968645	131968651	7mer-m8	131968644	131968664	149	-13.51
CAediting_524911	chr7_5495852_-	ENSG00000176171.10	ENST00000540159	hsa-miR-589-3p	131969712	131969718	7mer-m8	131969711	131969734	151	-20.94
CAediting_580943	chr7_100356700_+	ENSG00000176171.10	ENST00000540159	hsa-miR-6840-3p	131969583	131969589	7mer-m8	131969582	131969605	150	-22.6
CAediting_580943	chr7_100356700_+	ENSG00000176171.10	ENST00000540159	hsa-miR-6840-3p	131968439	131968445	7mer-m8	131968438	131968457	146	-19.76
CAediting_580943	chr7_100356700_+	ENSG00000176171.10	ENST00000540159	hsa-miR-6840-3p	131970101	131970107	7mer-m8	131970100	131970121	140	-22.93
CAediting_580943	chr7_100356700_+	ENSG00000176171.10	ENST00000540159	hsa-miR-6840-3p	131970069	131970075	7mer-m8	131970068	131970090	155	-26.67

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for BNIP3

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for BNIP3

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_790066	chr10_131966829_-	.	.	.	.	0.0147626641355251	0.330153567501939

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Relation with cancer stages for BNIP3

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for BNIP3

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for BNIP3

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for BNIP3

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
BNIP3	C0024623	Malignant neoplasm of stomach	1	CTD_human
BNIP3	C0026764	Multiple Myeloma	1	CTD_human
BNIP3	C0033578	Prostatic Neoplasms	1	CTD_human
BNIP3	C0038356	Stomach Neoplasms	1	CTD_human
BNIP3	C0376358	Malignant neoplasm of prostate	1	CTD_human
BNIP3	C0677050	Manganese Poisoning	1	CTD_human
BNIP3	C1708349	Hereditary Diffuse Gastric Cancer	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene