Home

Download

Statistics

Examples

Help

Contact

Editing gene: SNRPD1 (CAeditome ID:6632)

Gene summary for SNRPD1

Gene summary

Gene information	Gene symbol	SNRPD1
	Gene ID	6632
	Gene name	small nuclear ribonucleoprotein D1 polypeptide
	Synonyms	HsT2456\|SMD1\|SNRPD\|Sm-D1
	Cytomap	18q11.2
	Type of gene	protein-coding
	Description	small nuclear ribonucleoprotein Sm D1Sm-D autoantigensmall nuclear ribonucleoprotein D1 polypeptide 16kDa pseudogenesnRNP core protein D1
	Modification date	20210518
	UniProtAcc	P62314
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
SNRPD1	GO:0000387	Small nuclear ribonucleoprotein Sm D1	18984161
SNRPD1	GO:0000398	Small nuclear ribonucleoprotein Sm D1	28076346
SNRPD1	GO:0005634	Small nuclear ribonucleoprotein Sm D1	14524621
SNRPD1	GO:0005634	Small nuclear ribonucleoprotein Sm D1	28076346
SNRPD1	GO:0005829	Small nuclear ribonucleoprotein Sm D1	18984161
SNRPD1	GO:0005685	Small nuclear ribonucleoprotein Sm D1	21113136
SNRPD1	GO:0005685	Small nuclear ribonucleoprotein Sm D1	25555158
SNRPD1	GO:0005687	Small nuclear ribonucleoprotein Sm D1	21516107
SNRPD1	GO:0005689	Small nuclear ribonucleoprotein Sm D1	15146077
SNRPD1	GO:0034709	Small nuclear ribonucleoprotein Sm D1	18984161
SNRPD1	GO:0034715	Small nuclear ribonucleoprotein Sm D1	18984161
SNRPD1	GO:0034719	Small nuclear ribonucleoprotein Sm D1	18984161
SNRPD1	GO:0046540	Small nuclear ribonucleoprotein Sm D1	26912367
SNRPD1	GO:0071005	Small nuclear ribonucleoprotein Sm D1	28781166
SNRPD1	GO:0071007	Small nuclear ribonucleoprotein Sm D1	28076346
SNRPD1	GO:0071013	Small nuclear ribonucleoprotein Sm D1	11991638

Top

RNA A-to-I events for SNRPD1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000167088.9

RNA A-to-I editing events in Cancer.

CAediting_1256446(21612900, +), CAediting_1256447(21612938, +), CAediting_1256448(21612977, +), CAediting_1256449(21613695, +), CAediting_1256450(21613748, +), CAediting_1256451(21613780, +), CAediting_1256452(21613818, +), CAediting_1256453(21614018, +), CAediting_1256454(21614071, +), CAediting_1256455(21614117, +), CAediting_1256456(21614152, +), CAediting_1256457(21614153, +), CAediting_1256458(21614158, +), CAediting_1256459(21614162, +), CAediting_1256460(21614166, +), CAediting_1256461(21614180, +), CAediting_1256462(21615429, +), CAediting_1256463(21615430, +), CAediting_1256464(21615440, +), CAediting_1256465(21615498, +), CAediting_1256466(21615507, +), CAediting_1256467(21615524, +), CAediting_1256468(21616451, +), CAediting_1256469(21617227, +), CAediting_1256470(21617800, +), CAediting_1256471(21617858, +), CAediting_1256472(21619309, +), CAediting_1256473(21619321, +), CAediting_1256474(21620335, +), CAediting_1256475(21620363, +), CAediting_1256476(21621021, +), CAediting_1256477(21621454, +), CAediting_1256478(21621456, +), CAediting_1256479(21621501, +), CAediting_1256480(21621526, +), CAediting_1256481(21621527, +), CAediting_1256482(21621530, +), CAediting_1256483(21621542, +), CAediting_1256484(21621707, +), CAediting_1256485(21621711, +), CAediting_1256486(21624193, +), CAediting_1256487(21624570, +), CAediting_1256488(21624606, +), CAediting_1256489(21625442, +), CAediting_1256490(21625499, +), CAediting_1256491(21625740, +), CAediting_1256492(21625776, +), CAediting_1256493(21626115, +), CAediting_1256494(21626137, +), CAediting_1256495(21626138, +), CAediting_1256496(21626158, +), CAediting_1256497(21626168, +), CAediting_1256498(21626229, +), CAediting_1256499(21626247, +), CAediting_1256500(21626273, +), CAediting_1256501(21626296, +), CAediting_1256502(21626300, +), CAediting_1256503(21626535, +), CAediting_1256504(21626664, +), CAediting_1256505(21626693, +), CAediting_1256506(21626880, +), CAediting_1256507(21627247, +), CAediting_1256508(21627249, +), CAediting_1256509(21627299, +), CAediting_1256510(21627329, +), CAediting_1256511(21627377, +), CAediting_1256512(21627517, +), CAediting_1256513(21627519, +), CAediting_1256514(21628116, +), CAediting_1256515(21628118, +), CAediting_1256516(21628154, +), CAediting_1256517(21628194, +), CAediting_1256518(21628197, +), CAediting_1256519(21628198, +), CAediting_1256520(21628233, +), CAediting_1256521(21630472, +), CAediting_1256522(21630479, +), CAediting_1256523(21630506, +), CAediting_1256524(21630507, +), CAediting_1256525(21630512, +), CAediting_1256526(21630529, +), CAediting_1256527(21630533, +), CAediting_1256528(21630574, +), CAediting_1256529(21630576, +), CAediting_1256530(21630583, +), CAediting_1256531(21630584, +), CAediting_1256532(21630595, +), CAediting_1256533(21630598, +), CAediting_1256534(21630599, +), CAediting_1256535(21630600, +), CAediting_1256536(21630601, +), CAediting_1256537(21630602, +), CAediting_1256538(21630604, +), CAediting_1256539(21630607, +), CAediting_1256540(21630609, +), CAediting_1256541(21630617, +), CAediting_1256542(21630623, +), CAediting_1256543(21630629, +), CAediting_1256544(21630639, +), CAediting_1256545(21630649, +), CAediting_1256546(21630662, +), CAediting_1256547(21630681, +), CAediting_1256548(21630685, +), CAediting_1256549(21630748, +), CAediting_1256550(21630760, +), CAediting_1256551(21630761, +), CAediting_1256552(21631149, +), CAediting_1256553(21631151, +), CAediting_1256554(21631153, +), CAediting_1256555(21631169, +), CAediting_1256556(21631173, +), CAediting_1256557(21631185, +), CAediting_1256558(21631194, +), CAediting_1256559(21631204, +), CAediting_1256560(21631209, +), CAediting_1256561(21631210, +), CAediting_1256562(21631229, +), CAediting_1256563(21631232, +), CAediting_1256564(21631237, +), CAediting_1256565(21631247, +), CAediting_1256566(21631254, +), CAediting_1256567(21631259, +), CAediting_1256568(21631269, +), CAediting_1256569(21631271, +), CAediting_1256570(21631272, +), CAediting_1256571(21631285, +), CAediting_1256572(21631291, +), CAediting_1256573(21631295, +), CAediting_1256574(21631296, +), CAediting_1256575(21631306, +), CAediting_1256576(21631312, +), CAediting_1256577(21631315, +), CAediting_1256578(21631329, +), CAediting_1256579(21631492, +), CAediting_1256580(21631511, +), CAediting_1256581(21631516, +), CAediting_1256582(21631517, +), CAediting_1256583(21631536, +), CAediting_1256584(21631541, +), CAediting_1256585(21631554, +), CAediting_1256586(21631566, +), CAediting_1256587(21631576, +), CAediting_1256588(21631598, +), CAediting_1256589(21631602, +), CAediting_1256590(21631603, +), CAediting_1256591(21631618, +), CAediting_1256592(21631689, +), CAediting_1256593(21631703, +), CAediting_1256594(21631712, +), CAediting_1256595(21631754, +), CAediting_1256596(21631976, +), CAediting_1256597(21631987, +), CAediting_1256598(21632002, +), CAediting_1256599(21632008, +), CAediting_1256600(21632018, +), CAediting_1256601(21632030, +), CAediting_1256602(21632031, +), CAediting_1256603(21632036, +), CAediting_1256604(21632049, +), CAediting_1256605(21632064, +), CAediting_1256606(21632078, +), CAediting_1256607(21632099, +), CAediting_1256608(21632100, +), CAediting_1256609(21632104, +), CAediting_1256610(21632187, +), CAediting_1256611(21632197, +), CAediting_1256612(21632211, +), CAediting_1256613(21632222, +), CAediting_1256614(21632228, +), CAediting_1256615(21632237, +), CAediting_1256616(21632238, +), CAediting_1256617(21632241, +), CAediting_1256618(21632246, +), CAediting_1256619(21632251, +), CAediting_1256620(21632254, +), CAediting_1256621(21632260, +), CAediting_1256622(21632262, +), CAediting_1256623(21632265, +), CAediting_1256624(21632274, +), CAediting_1256625(21632275, +), CAediting_1256626(21632277, +), CAediting_1256627(21632284, +), CAediting_1256628(21632285, +), CAediting_1256629(21632294, +), CAediting_1256630(21632298, +), CAediting_1256631(21632299, +), CAediting_1256632(21632300, +), CAediting_1256633(21632301, +), CAediting_1256634(21632306, +), CAediting_1256635(21632307, +), CAediting_1256636(21632308, +), CAediting_1256637(21632312, +), CAediting_1256638(21632338, +), CAediting_1256639(21632339, +), CAediting_1256640(21632344, +), CAediting_1256641(21632348, +), CAediting_1256642(21632355, +), CAediting_1256643(21632361, +), CAediting_1256644(21632365, +), CAediting_1256645(21632370, +), CAediting_1256646(21632371, +), CAediting_1256647(21632379, +), CAediting_1256648(21632380, +), CAediting_1256649(21632391, +), CAediting_1256650(21632400, +), CAediting_1256651(21632404, +), CAediting_1256652(21632409, +), CAediting_1256653(21632411, +), CAediting_1256654(21632414, +), CAediting_1256655(21632416, +), CAediting_1256656(21632419, +), CAediting_1256657(21632424, +), CAediting_1256658(21632435, +), CAediting_1256659(21632441, +), CAediting_1256660(21632447, +), CAediting_1256661(21632458, +), CAediting_1256662(21632459, +), CAediting_1256663(21632460, +), CAediting_1256664(21632461, +), CAediting_1256665(21632463, +), CAediting_1256666(21632464, +), CAediting_1256667(21632466, +), CAediting_1256668(21632870, +), CAediting_1256669(21632890, +), CAediting_1256670(21632894, +), CAediting_1256671(21632906, +), CAediting_1256672(21632914, +), CAediting_1256673(21632925, +), CAediting_1256674(21632931, +), CAediting_1256675(21632955, +), CAediting_1256676(21632968, +), CAediting_1256677(21632977, +), CAediting_1256678(21632980, +), CAediting_1256679(21632985, +), CAediting_1256680(21632990, +), CAediting_1256681(21632992, +), CAediting_1256682(21633006, +), CAediting_1256683(21633026, +), CAediting_1256684(21633032, +), CAediting_1256685(21633035, +), CAediting_1256686(21633037, +), CAediting_1256687(21633049, +), CAediting_1256688(21633081, +), CAediting_1256689(21633089, +), CAediting_1256690(21633110, +), CAediting_1256691(21633111, +), CAediting_1256692(21633112, +), CAediting_1256693(21633124, +), CAediting_1256694(21633133, +),

Top

RNA editing positional annotations for SNRPD1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1256446	chr18_21612900_+	intronic
CAediting_1256447	chr18_21612938_+	intronic
CAediting_1256448	chr18_21612977_+	intronic
CAediting_1256449	chr18_21613695_+	intronic
CAediting_1256450	chr18_21613748_+	intronic
CAediting_1256451	chr18_21613780_+	intronic
CAediting_1256452	chr18_21613818_+	intronic
CAediting_1256453	chr18_21614018_+	intronic
CAediting_1256454	chr18_21614071_+	intronic
CAediting_1256455	chr18_21614117_+	intronic
CAediting_1256456	chr18_21614152_+	intronic
CAediting_1256457	chr18_21614153_+	intronic
CAediting_1256458	chr18_21614158_+	intronic
CAediting_1256459	chr18_21614162_+	intronic
CAediting_1256460	chr18_21614166_+	intronic
CAediting_1256461	chr18_21614180_+	intronic
CAediting_1256462	chr18_21615429_+	intronic
CAediting_1256463	chr18_21615430_+	intronic
CAediting_1256464	chr18_21615440_+	intronic
CAediting_1256465	chr18_21615498_+	intronic
CAediting_1256466	chr18_21615507_+	intronic
CAediting_1256467	chr18_21615524_+	intronic
CAediting_1256468	chr18_21616451_+	intronic
CAediting_1256469	chr18_21617227_+	intronic
CAediting_1256470	chr18_21617800_+	intronic
CAediting_1256471	chr18_21617858_+	intronic
CAediting_1256472	chr18_21619309_+	intronic
CAediting_1256473	chr18_21619321_+	intronic
CAediting_1256474	chr18_21620335_+	intronic
CAediting_1256475	chr18_21620363_+	intronic
CAediting_1256476	chr18_21621021_+	intronic
CAediting_1256477	chr18_21621454_+	intronic
CAediting_1256478	chr18_21621456_+	intronic
CAediting_1256479	chr18_21621501_+	intronic
CAediting_1256480	chr18_21621526_+	intronic
CAediting_1256481	chr18_21621527_+	intronic
CAediting_1256482	chr18_21621530_+	intronic
CAediting_1256483	chr18_21621542_+	intronic
CAediting_1256484	chr18_21621707_+	intronic
CAediting_1256485	chr18_21621711_+	intronic
CAediting_1256486	chr18_21624193_+	intronic
CAediting_1256487	chr18_21624570_+	intronic
CAediting_1256488	chr18_21624606_+	intronic
CAediting_1256489	chr18_21625442_+	intronic
CAediting_1256490	chr18_21625499_+	intronic
CAediting_1256491	chr18_21625740_+	intronic
CAediting_1256492	chr18_21625776_+	intronic
CAediting_1256493	chr18_21626115_+	intronic
CAediting_1256494	chr18_21626137_+	intronic
CAediting_1256495	chr18_21626138_+	intronic
CAediting_1256496	chr18_21626158_+	intronic
CAediting_1256497	chr18_21626168_+	intronic
CAediting_1256498	chr18_21626229_+	intronic
CAediting_1256499	chr18_21626247_+	intronic
CAediting_1256500	chr18_21626273_+	intronic
CAediting_1256501	chr18_21626296_+	intronic
CAediting_1256502	chr18_21626300_+	intronic
CAediting_1256503	chr18_21626535_+	intronic
CAediting_1256504	chr18_21626664_+	intronic
CAediting_1256505	chr18_21626693_+	intronic
CAediting_1256506	chr18_21626880_+	intronic
CAediting_1256507	chr18_21627247_+	intronic
CAediting_1256508	chr18_21627249_+	intronic
CAediting_1256509	chr18_21627299_+	intronic
CAediting_1256510	chr18_21627329_+	intronic
CAediting_1256511	chr18_21627377_+	intronic
CAediting_1256512	chr18_21627517_+	intronic
CAediting_1256513	chr18_21627519_+	intronic
CAediting_1256514	chr18_21628116_+	intronic
CAediting_1256515	chr18_21628118_+	intronic
CAediting_1256516	chr18_21628154_+	intronic
CAediting_1256517	chr18_21628194_+	intronic
CAediting_1256518	chr18_21628197_+	intronic
CAediting_1256519	chr18_21628198_+	intronic
CAediting_1256520	chr18_21628233_+	intronic
CAediting_1256521	chr18_21630472_+	ncRNA_exonic
CAediting_1256522	chr18_21630479_+	ncRNA_exonic
CAediting_1256523	chr18_21630506_+	ncRNA_intronic
CAediting_1256524	chr18_21630507_+	ncRNA_intronic
CAediting_1256525	chr18_21630512_+	ncRNA_intronic
CAediting_1256526	chr18_21630529_+	ncRNA_intronic
CAediting_1256527	chr18_21630533_+	ncRNA_intronic
CAediting_1256528	chr18_21630574_+	ncRNA_intronic
CAediting_1256529	chr18_21630576_+	ncRNA_intronic
CAediting_1256530	chr18_21630583_+	ncRNA_intronic
CAediting_1256531	chr18_21630584_+	ncRNA_intronic
CAediting_1256532	chr18_21630595_+	ncRNA_intronic
CAediting_1256533	chr18_21630598_+	ncRNA_intronic
CAediting_1256534	chr18_21630599_+	ncRNA_intronic
CAediting_1256535	chr18_21630600_+	ncRNA_intronic
CAediting_1256536	chr18_21630601_+	ncRNA_intronic
CAediting_1256537	chr18_21630602_+	ncRNA_intronic
CAediting_1256538	chr18_21630604_+	ncRNA_intronic
CAediting_1256539	chr18_21630607_+	ncRNA_intronic
CAediting_1256540	chr18_21630609_+	ncRNA_intronic
CAediting_1256541	chr18_21630617_+	ncRNA_intronic
CAediting_1256542	chr18_21630623_+	ncRNA_intronic
CAediting_1256543	chr18_21630629_+	ncRNA_intronic
CAediting_1256544	chr18_21630639_+	ncRNA_intronic
CAediting_1256545	chr18_21630649_+	ncRNA_intronic
CAediting_1256546	chr18_21630662_+	ncRNA_intronic
CAediting_1256547	chr18_21630681_+	ncRNA_intronic
CAediting_1256548	chr18_21630685_+	ncRNA_intronic
CAediting_1256549	chr18_21630748_+	ncRNA_intronic
CAediting_1256550	chr18_21630760_+	ncRNA_intronic
CAediting_1256551	chr18_21630761_+	ncRNA_intronic
CAediting_1256552	chr18_21631149_+	ncRNA_intronic
CAediting_1256553	chr18_21631151_+	ncRNA_intronic
CAediting_1256554	chr18_21631153_+	ncRNA_intronic
CAediting_1256555	chr18_21631169_+	ncRNA_intronic
CAediting_1256556	chr18_21631173_+	ncRNA_intronic
CAediting_1256557	chr18_21631185_+	ncRNA_intronic
CAediting_1256558	chr18_21631194_+	ncRNA_intronic
CAediting_1256559	chr18_21631204_+	ncRNA_intronic
CAediting_1256560	chr18_21631209_+	ncRNA_intronic
CAediting_1256561	chr18_21631210_+	ncRNA_intronic
CAediting_1256562	chr18_21631229_+	ncRNA_intronic
CAediting_1256563	chr18_21631232_+	ncRNA_intronic
CAediting_1256564	chr18_21631237_+	ncRNA_intronic
CAediting_1256565	chr18_21631247_+	ncRNA_intronic
CAediting_1256566	chr18_21631254_+	ncRNA_intronic
CAediting_1256567	chr18_21631259_+	ncRNA_intronic
CAediting_1256568	chr18_21631269_+	ncRNA_intronic
CAediting_1256569	chr18_21631271_+	ncRNA_intronic
CAediting_1256570	chr18_21631272_+	ncRNA_intronic
CAediting_1256571	chr18_21631285_+	ncRNA_intronic
CAediting_1256572	chr18_21631291_+	ncRNA_intronic
CAediting_1256573	chr18_21631295_+	ncRNA_intronic
CAediting_1256574	chr18_21631296_+	ncRNA_intronic
CAediting_1256575	chr18_21631306_+	ncRNA_intronic
CAediting_1256576	chr18_21631312_+	ncRNA_intronic
CAediting_1256577	chr18_21631315_+	ncRNA_intronic
CAediting_1256578	chr18_21631329_+	ncRNA_intronic
CAediting_1256579	chr18_21631492_+	ncRNA_intronic
CAediting_1256580	chr18_21631511_+	ncRNA_intronic
CAediting_1256581	chr18_21631516_+	ncRNA_intronic
CAediting_1256582	chr18_21631517_+	ncRNA_intronic
CAediting_1256583	chr18_21631536_+	ncRNA_intronic
CAediting_1256584	chr18_21631541_+	ncRNA_intronic
CAediting_1256585	chr18_21631554_+	ncRNA_intronic
CAediting_1256586	chr18_21631566_+	ncRNA_intronic
CAediting_1256587	chr18_21631576_+	ncRNA_intronic
CAediting_1256588	chr18_21631598_+	ncRNA_intronic
CAediting_1256589	chr18_21631602_+	ncRNA_intronic
CAediting_1256590	chr18_21631603_+	ncRNA_intronic
CAediting_1256591	chr18_21631618_+	ncRNA_intronic
CAediting_1256592	chr18_21631689_+	ncRNA_intronic
CAediting_1256593	chr18_21631703_+	ncRNA_intronic
CAediting_1256594	chr18_21631712_+	ncRNA_intronic
CAediting_1256595	chr18_21631754_+	ncRNA_intronic
CAediting_1256596	chr18_21631976_+	ncRNA_intronic
CAediting_1256597	chr18_21631987_+	ncRNA_intronic
CAediting_1256598	chr18_21632002_+	ncRNA_intronic
CAediting_1256599	chr18_21632008_+	ncRNA_intronic
CAediting_1256600	chr18_21632018_+	ncRNA_intronic
CAediting_1256601	chr18_21632030_+	ncRNA_intronic
CAediting_1256602	chr18_21632031_+	ncRNA_intronic
CAediting_1256603	chr18_21632036_+	ncRNA_intronic
CAediting_1256604	chr18_21632049_+	ncRNA_intronic
CAediting_1256605	chr18_21632064_+	ncRNA_intronic
CAediting_1256606	chr18_21632078_+	ncRNA_intronic
CAediting_1256607	chr18_21632099_+	ncRNA_intronic
CAediting_1256608	chr18_21632100_+	ncRNA_intronic
CAediting_1256609	chr18_21632104_+	ncRNA_intronic
CAediting_1256610	chr18_21632187_+	ncRNA_intronic
CAediting_1256611	chr18_21632197_+	ncRNA_intronic
CAediting_1256612	chr18_21632211_+	ncRNA_intronic
CAediting_1256613	chr18_21632222_+	ncRNA_intronic
CAediting_1256614	chr18_21632228_+	ncRNA_intronic
CAediting_1256615	chr18_21632237_+	ncRNA_intronic
CAediting_1256616	chr18_21632238_+	ncRNA_intronic
CAediting_1256617	chr18_21632241_+	ncRNA_intronic
CAediting_1256618	chr18_21632246_+	ncRNA_intronic
CAediting_1256619	chr18_21632251_+	ncRNA_intronic
CAediting_1256620	chr18_21632254_+	ncRNA_intronic
CAediting_1256621	chr18_21632260_+	ncRNA_intronic
CAediting_1256622	chr18_21632262_+	ncRNA_intronic
CAediting_1256623	chr18_21632265_+	ncRNA_intronic
CAediting_1256624	chr18_21632274_+	ncRNA_intronic
CAediting_1256625	chr18_21632275_+	ncRNA_intronic
CAediting_1256626	chr18_21632277_+	ncRNA_intronic
CAediting_1256627	chr18_21632284_+	ncRNA_intronic
CAediting_1256628	chr18_21632285_+	ncRNA_intronic
CAediting_1256629	chr18_21632294_+	ncRNA_intronic
CAediting_1256630	chr18_21632298_+	ncRNA_intronic
CAediting_1256631	chr18_21632299_+	ncRNA_intronic
CAediting_1256632	chr18_21632300_+	ncRNA_intronic
CAediting_1256633	chr18_21632301_+	ncRNA_intronic
CAediting_1256634	chr18_21632306_+	ncRNA_intronic
CAediting_1256635	chr18_21632307_+	ncRNA_intronic
CAediting_1256636	chr18_21632308_+	ncRNA_intronic
CAediting_1256637	chr18_21632312_+	ncRNA_intronic
CAediting_1256638	chr18_21632338_+	ncRNA_intronic
CAediting_1256639	chr18_21632339_+	ncRNA_intronic
CAediting_1256640	chr18_21632344_+	ncRNA_intronic
CAediting_1256641	chr18_21632348_+	ncRNA_intronic
CAediting_1256642	chr18_21632355_+	ncRNA_intronic
CAediting_1256643	chr18_21632361_+	ncRNA_intronic
CAediting_1256644	chr18_21632365_+	ncRNA_intronic
CAediting_1256645	chr18_21632370_+	ncRNA_intronic
CAediting_1256646	chr18_21632371_+	ncRNA_intronic
CAediting_1256647	chr18_21632379_+	ncRNA_intronic
CAediting_1256648	chr18_21632380_+	ncRNA_intronic
CAediting_1256649	chr18_21632391_+	ncRNA_intronic
CAediting_1256650	chr18_21632400_+	ncRNA_intronic
CAediting_1256651	chr18_21632404_+	ncRNA_intronic
CAediting_1256652	chr18_21632409_+	ncRNA_intronic
CAediting_1256653	chr18_21632411_+	ncRNA_intronic
CAediting_1256654	chr18_21632414_+	ncRNA_intronic
CAediting_1256655	chr18_21632416_+	ncRNA_intronic
CAediting_1256656	chr18_21632419_+	ncRNA_intronic
CAediting_1256657	chr18_21632424_+	ncRNA_intronic
CAediting_1256658	chr18_21632435_+	ncRNA_intronic
CAediting_1256659	chr18_21632441_+	ncRNA_intronic
CAediting_1256660	chr18_21632447_+	ncRNA_intronic
CAediting_1256661	chr18_21632458_+	ncRNA_intronic
CAediting_1256662	chr18_21632459_+	ncRNA_intronic
CAediting_1256663	chr18_21632460_+	ncRNA_intronic
CAediting_1256664	chr18_21632461_+	ncRNA_intronic
CAediting_1256665	chr18_21632463_+	ncRNA_intronic
CAediting_1256666	chr18_21632464_+	ncRNA_intronic
CAediting_1256667	chr18_21632466_+	ncRNA_intronic
CAediting_1256668	chr18_21632870_+	ncRNA_intronic
CAediting_1256669	chr18_21632890_+	ncRNA_intronic
CAediting_1256670	chr18_21632894_+	ncRNA_intronic
CAediting_1256671	chr18_21632906_+	ncRNA_intronic
CAediting_1256672	chr18_21632914_+	ncRNA_intronic
CAediting_1256673	chr18_21632925_+	ncRNA_intronic
CAediting_1256674	chr18_21632931_+	ncRNA_intronic
CAediting_1256675	chr18_21632955_+	ncRNA_intronic
CAediting_1256676	chr18_21632968_+	ncRNA_intronic
CAediting_1256677	chr18_21632977_+	ncRNA_intronic
CAediting_1256678	chr18_21632980_+	ncRNA_intronic
CAediting_1256679	chr18_21632985_+	ncRNA_intronic
CAediting_1256680	chr18_21632990_+	ncRNA_intronic
CAediting_1256681	chr18_21632992_+	ncRNA_intronic
CAediting_1256682	chr18_21633006_+	ncRNA_intronic
CAediting_1256683	chr18_21633026_+	ncRNA_intronic
CAediting_1256684	chr18_21633032_+	ncRNA_intronic
CAediting_1256685	chr18_21633035_+	ncRNA_intronic
CAediting_1256686	chr18_21633037_+	ncRNA_intronic
CAediting_1256687	chr18_21633049_+	ncRNA_intronic
CAediting_1256688	chr18_21633081_+	ncRNA_intronic
CAediting_1256689	chr18_21633089_+	ncRNA_intronic
CAediting_1256690	chr18_21633110_+	ncRNA_intronic
CAediting_1256691	chr18_21633111_+	ncRNA_intronic
CAediting_1256692	chr18_21633112_+	ncRNA_intronic
CAediting_1256693	chr18_21633124_+	ncRNA_intronic
CAediting_1256694	chr18_21633133_+	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1256446	chr18_21612900_+	SINE	Alu	AluJo
CAediting_1256447	chr18_21612938_+	SINE	Alu	AluJo
CAediting_1256448	chr18_21612977_+	SINE	Alu	AluJo
CAediting_1256449	chr18_21613695_+	SINE	Alu	AluSg
CAediting_1256450	chr18_21613748_+	SINE	Alu	AluSg
CAediting_1256451	chr18_21613780_+	SINE	Alu	AluSg
CAediting_1256452	chr18_21613818_+	SINE	Alu	AluSg
CAediting_1256453	chr18_21614018_+	SINE	Alu	AluSx1
CAediting_1256454	chr18_21614071_+	SINE	Alu	AluSx1
CAediting_1256455	chr18_21614117_+	SINE	Alu	AluSx1
CAediting_1256456	chr18_21614152_+	SINE	Alu	AluSx1
CAediting_1256457	chr18_21614153_+	SINE	Alu	AluSx1
CAediting_1256458	chr18_21614158_+	SINE	Alu	AluSx1
CAediting_1256459	chr18_21614162_+	SINE	Alu	AluSx1
CAediting_1256460	chr18_21614166_+	SINE	Alu	AluSx1
CAediting_1256461	chr18_21614180_+	SINE	Alu	AluSx1
CAediting_1256462	chr18_21615429_+	SINE	Alu	AluSx1
CAediting_1256463	chr18_21615430_+	SINE	Alu	AluSx1
CAediting_1256464	chr18_21615440_+	SINE	Alu	AluSx1
CAediting_1256465	chr18_21615498_+	SINE	Alu	AluSx1
CAediting_1256466	chr18_21615507_+	SINE	Alu	AluSx1
CAediting_1256467	chr18_21615524_+	SINE	Alu	AluSx1
CAediting_1256468	chr18_21616451_+	SINE	Alu	AluSq4
CAediting_1256469	chr18_21617227_+	SINE	Alu	AluSx1
CAediting_1256470	chr18_21617800_+	SINE	Alu	AluSz6
CAediting_1256471	chr18_21617858_+	SINE	Alu	AluSz6
CAediting_1256472	chr18_21619309_+	SINE	Alu	AluSx
CAediting_1256473	chr18_21619321_+	SINE	Alu	AluSx
CAediting_1256474	chr18_21620335_+	SINE	Alu	AluJr
CAediting_1256475	chr18_21620363_+	SINE	Alu	AluJr
CAediting_1256476	chr18_21621021_+	SINE	Alu	AluY
CAediting_1256477	chr18_21621454_+	SINE	Alu	AluSx
CAediting_1256478	chr18_21621456_+	SINE	Alu	AluSx
CAediting_1256479	chr18_21621501_+	SINE	Alu	AluSx
CAediting_1256480	chr18_21621526_+	SINE	Alu	AluSx
CAediting_1256481	chr18_21621527_+	SINE	Alu	AluSx
CAediting_1256482	chr18_21621530_+	SINE	Alu	AluSx
CAediting_1256483	chr18_21621542_+	SINE	Alu	AluSx
CAediting_1256484	chr18_21621707_+	SINE	Alu	AluSx
CAediting_1256485	chr18_21621711_+	SINE	Alu	AluSx
CAediting_1256486	chr18_21624193_+	SINE	Alu	AluSg
CAediting_1256487	chr18_21624570_+	SINE	Alu	AluSx
CAediting_1256488	chr18_21624606_+	SINE	Alu	AluSx
CAediting_1256489	chr18_21625442_+	SINE	Alu	AluSq
CAediting_1256490	chr18_21625499_+	SINE	Alu	AluSq
CAediting_1256491	chr18_21625740_+	SINE	Alu	AluY
CAediting_1256492	chr18_21625776_+	SINE	Alu	AluY
CAediting_1256493	chr18_21626115_+	SINE	Alu	AluSx1
CAediting_1256494	chr18_21626137_+	SINE	Alu	AluSx1
CAediting_1256495	chr18_21626138_+	SINE	Alu	AluSx1
CAediting_1256496	chr18_21626158_+	SINE	Alu	AluSx1
CAediting_1256497	chr18_21626168_+	SINE	Alu	AluSx1
CAediting_1256498	chr18_21626229_+	SINE	Alu	AluSx1
CAediting_1256499	chr18_21626247_+	SINE	Alu	AluSx1
CAediting_1256500	chr18_21626273_+	SINE	Alu	AluSx1
CAediting_1256501	chr18_21626296_+	SINE	Alu	AluSx1
CAediting_1256502	chr18_21626300_+	SINE	Alu	AluSx1
CAediting_1256503	chr18_21626535_+	SINE	Alu	AluSg7
CAediting_1256504	chr18_21626664_+	SINE	Alu	AluSg7
CAediting_1256505	chr18_21626693_+	SINE	Alu	AluSg7
CAediting_1256506	chr18_21626880_+	SINE	Alu	AluJb
CAediting_1256507	chr18_21627247_+	SINE	Alu	AluJb
CAediting_1256508	chr18_21627249_+	SINE	Alu	AluJb
CAediting_1256509	chr18_21627299_+	SINE	Alu	AluJb
CAediting_1256510	chr18_21627329_+	SINE	Alu	AluJb
CAediting_1256511	chr18_21627377_+	SINE	Alu	AluJb
CAediting_1256512	chr18_21627517_+	SINE	Alu	AluSx
CAediting_1256513	chr18_21627519_+	SINE	Alu	AluSx
CAediting_1256514	chr18_21628116_+	SINE	Alu	AluJr
CAediting_1256515	chr18_21628118_+	SINE	Alu	AluJr
CAediting_1256516	chr18_21628154_+	SINE	Alu	AluJr
CAediting_1256517	chr18_21628194_+	SINE	Alu	AluJr
CAediting_1256518	chr18_21628197_+	SINE	Alu	AluJr
CAediting_1256519	chr18_21628198_+	SINE	Alu	AluJr
CAediting_1256520	chr18_21628233_+	SINE	Alu	AluJr
CAediting_1256523	chr18_21630506_+	SINE	Alu	AluSg4
CAediting_1256524	chr18_21630507_+	SINE	Alu	AluSg4
CAediting_1256525	chr18_21630512_+	SINE	Alu	AluSg4
CAediting_1256526	chr18_21630529_+	SINE	Alu	AluSg4
CAediting_1256527	chr18_21630533_+	SINE	Alu	AluSg4
CAediting_1256528	chr18_21630574_+	SINE	Alu	AluSg4
CAediting_1256529	chr18_21630576_+	SINE	Alu	AluSg4
CAediting_1256530	chr18_21630583_+	SINE	Alu	AluSg4
CAediting_1256531	chr18_21630584_+	SINE	Alu	AluSg4
CAediting_1256532	chr18_21630595_+	SINE	Alu	AluSg4
CAediting_1256533	chr18_21630598_+	SINE	Alu	AluSg4
CAediting_1256534	chr18_21630599_+	SINE	Alu	AluSg4
CAediting_1256535	chr18_21630600_+	SINE	Alu	AluSg4
CAediting_1256536	chr18_21630601_+	SINE	Alu	AluSg4
CAediting_1256537	chr18_21630602_+	SINE	Alu	AluSg4
CAediting_1256538	chr18_21630604_+	SINE	Alu	AluSg4
CAediting_1256539	chr18_21630607_+	SINE	Alu	AluSg4
CAediting_1256540	chr18_21630609_+	SINE	Alu	AluSg4
CAediting_1256541	chr18_21630617_+	SINE	Alu	AluSg4
CAediting_1256542	chr18_21630623_+	SINE	Alu	AluSg4
CAediting_1256543	chr18_21630629_+	SINE	Alu	AluSg4
CAediting_1256544	chr18_21630639_+	SINE	Alu	AluSg4
CAediting_1256545	chr18_21630649_+	SINE	Alu	AluSg4
CAediting_1256546	chr18_21630662_+	SINE	Alu	AluSg4
CAediting_1256547	chr18_21630681_+	SINE	Alu	AluSg4
CAediting_1256548	chr18_21630685_+	SINE	Alu	AluSg4
CAediting_1256549	chr18_21630748_+	SINE	Alu	AluSg4
CAediting_1256550	chr18_21630760_+	SINE	Alu	AluSg4
CAediting_1256551	chr18_21630761_+	SINE	Alu	AluSg4
CAediting_1256552	chr18_21631149_+	SINE	Alu	AluSz6
CAediting_1256553	chr18_21631151_+	SINE	Alu	AluSz6
CAediting_1256554	chr18_21631153_+	SINE	Alu	AluSz6
CAediting_1256555	chr18_21631169_+	SINE	Alu	AluSz6
CAediting_1256556	chr18_21631173_+	SINE	Alu	AluSz6
CAediting_1256557	chr18_21631185_+	SINE	Alu	AluSz6
CAediting_1256558	chr18_21631194_+	SINE	Alu	AluSz6
CAediting_1256559	chr18_21631204_+	SINE	Alu	AluSz6
CAediting_1256560	chr18_21631209_+	SINE	Alu	AluSz6
CAediting_1256561	chr18_21631210_+	SINE	Alu	AluSz6
CAediting_1256562	chr18_21631229_+	SINE	Alu	AluSz6
CAediting_1256563	chr18_21631232_+	SINE	Alu	AluSz6
CAediting_1256564	chr18_21631237_+	SINE	Alu	AluSz6
CAediting_1256565	chr18_21631247_+	SINE	Alu	AluSz6
CAediting_1256566	chr18_21631254_+	SINE	Alu	AluSz6
CAediting_1256567	chr18_21631259_+	SINE	Alu	AluSz6
CAediting_1256568	chr18_21631269_+	SINE	Alu	AluSz6
CAediting_1256569	chr18_21631271_+	SINE	Alu	AluSz6
CAediting_1256570	chr18_21631272_+	SINE	Alu	AluSz6
CAediting_1256571	chr18_21631285_+	SINE	Alu	AluSz6
CAediting_1256572	chr18_21631291_+	SINE	Alu	AluSz6
CAediting_1256573	chr18_21631295_+	SINE	Alu	AluSz6
CAediting_1256574	chr18_21631296_+	SINE	Alu	AluSz6
CAediting_1256575	chr18_21631306_+	SINE	Alu	AluSz6
CAediting_1256576	chr18_21631312_+	SINE	Alu	AluSz6
CAediting_1256577	chr18_21631315_+	SINE	Alu	AluSz6
CAediting_1256578	chr18_21631329_+	SINE	Alu	AluSz6
CAediting_1256579	chr18_21631492_+	SINE	Alu	AluY
CAediting_1256580	chr18_21631511_+	SINE	Alu	AluY
CAediting_1256581	chr18_21631516_+	SINE	Alu	AluY
CAediting_1256582	chr18_21631517_+	SINE	Alu	AluY
CAediting_1256583	chr18_21631536_+	SINE	Alu	AluY
CAediting_1256584	chr18_21631541_+	SINE	Alu	AluY
CAediting_1256585	chr18_21631554_+	SINE	Alu	AluY
CAediting_1256586	chr18_21631566_+	SINE	Alu	AluY
CAediting_1256587	chr18_21631576_+	SINE	Alu	AluY
CAediting_1256588	chr18_21631598_+	SINE	Alu	AluY
CAediting_1256589	chr18_21631602_+	SINE	Alu	AluY
CAediting_1256590	chr18_21631603_+	SINE	Alu	AluY
CAediting_1256591	chr18_21631618_+	SINE	Alu	AluY
CAediting_1256592	chr18_21631689_+	SINE	Alu	AluY
CAediting_1256593	chr18_21631703_+	SINE	Alu	AluY
CAediting_1256594	chr18_21631712_+	SINE	Alu	AluY
CAediting_1256595	chr18_21631754_+	LTR	ERVL	LTR33
CAediting_1256596	chr18_21631976_+	SINE	Alu	AluJo
CAediting_1256597	chr18_21631987_+	SINE	Alu	AluJo
CAediting_1256598	chr18_21632002_+	SINE	Alu	AluJo
CAediting_1256599	chr18_21632008_+	SINE	Alu	AluJo
CAediting_1256600	chr18_21632018_+	SINE	Alu	AluJo
CAediting_1256601	chr18_21632030_+	SINE	Alu	AluJo
CAediting_1256602	chr18_21632031_+	SINE	Alu	AluJo
CAediting_1256603	chr18_21632036_+	SINE	Alu	AluJo
CAediting_1256604	chr18_21632049_+	SINE	Alu	AluJo
CAediting_1256605	chr18_21632064_+	SINE	Alu	AluJo
CAediting_1256606	chr18_21632078_+	SINE	Alu	AluJo
CAediting_1256607	chr18_21632099_+	SINE	Alu	AluJo
CAediting_1256608	chr18_21632100_+	SINE	Alu	AluJo
CAediting_1256609	chr18_21632104_+	SINE	Alu	AluJo
CAediting_1256610	chr18_21632187_+	SINE	Alu	AluSx1
CAediting_1256611	chr18_21632197_+	SINE	Alu	AluSx1
CAediting_1256612	chr18_21632211_+	SINE	Alu	AluSx1
CAediting_1256613	chr18_21632222_+	SINE	Alu	AluSx1
CAediting_1256614	chr18_21632228_+	SINE	Alu	AluSx1
CAediting_1256615	chr18_21632237_+	SINE	Alu	AluSx1
CAediting_1256616	chr18_21632238_+	SINE	Alu	AluSx1
CAediting_1256617	chr18_21632241_+	SINE	Alu	AluSx1
CAediting_1256618	chr18_21632246_+	SINE	Alu	AluSx1
CAediting_1256619	chr18_21632251_+	SINE	Alu	AluSx1
CAediting_1256620	chr18_21632254_+	SINE	Alu	AluSx1
CAediting_1256621	chr18_21632260_+	SINE	Alu	AluSx1
CAediting_1256622	chr18_21632262_+	SINE	Alu	AluSx1
CAediting_1256623	chr18_21632265_+	SINE	Alu	AluSx1
CAediting_1256624	chr18_21632274_+	SINE	Alu	AluSx1
CAediting_1256625	chr18_21632275_+	SINE	Alu	AluSx1
CAediting_1256626	chr18_21632277_+	SINE	Alu	AluSx1
CAediting_1256627	chr18_21632284_+	SINE	Alu	AluSx1
CAediting_1256628	chr18_21632285_+	SINE	Alu	AluSx1
CAediting_1256629	chr18_21632294_+	SINE	Alu	AluSx1
CAediting_1256630	chr18_21632298_+	SINE	Alu	AluSx1
CAediting_1256631	chr18_21632299_+	SINE	Alu	AluSx1
CAediting_1256632	chr18_21632300_+	SINE	Alu	AluSx1
CAediting_1256633	chr18_21632301_+	SINE	Alu	AluSx1
CAediting_1256634	chr18_21632306_+	SINE	Alu	AluSx1
CAediting_1256635	chr18_21632307_+	SINE	Alu	AluSx1
CAediting_1256636	chr18_21632308_+	SINE	Alu	AluSx1
CAediting_1256637	chr18_21632312_+	SINE	Alu	AluSx1
CAediting_1256638	chr18_21632338_+	SINE	Alu	AluSx1
CAediting_1256639	chr18_21632339_+	SINE	Alu	AluSx1
CAediting_1256640	chr18_21632344_+	SINE	Alu	AluSx1
CAediting_1256641	chr18_21632348_+	SINE	Alu	AluSx1
CAediting_1256642	chr18_21632355_+	SINE	Alu	AluSx1
CAediting_1256643	chr18_21632361_+	SINE	Alu	AluSx1
CAediting_1256644	chr18_21632365_+	SINE	Alu	AluSx1
CAediting_1256645	chr18_21632370_+	SINE	Alu	AluSx1
CAediting_1256646	chr18_21632371_+	SINE	Alu	AluSx1
CAediting_1256647	chr18_21632379_+	SINE	Alu	AluSx1
CAediting_1256648	chr18_21632380_+	SINE	Alu	AluSx1
CAediting_1256649	chr18_21632391_+	SINE	Alu	AluSx1
CAediting_1256650	chr18_21632400_+	SINE	Alu	AluSx1
CAediting_1256651	chr18_21632404_+	SINE	Alu	AluSx1
CAediting_1256652	chr18_21632409_+	SINE	Alu	AluSx1
CAediting_1256653	chr18_21632411_+	SINE	Alu	AluSx1
CAediting_1256654	chr18_21632414_+	SINE	Alu	AluSx1
CAediting_1256655	chr18_21632416_+	SINE	Alu	AluSx1
CAediting_1256656	chr18_21632419_+	SINE	Alu	AluSx1
CAediting_1256657	chr18_21632424_+	SINE	Alu	AluSx1
CAediting_1256658	chr18_21632435_+	SINE	Alu	AluSx1
CAediting_1256659	chr18_21632441_+	SINE	Alu	AluSx1
CAediting_1256660	chr18_21632447_+	SINE	Alu	AluSx1
CAediting_1256661	chr18_21632458_+	SINE	Alu	AluSx1
CAediting_1256662	chr18_21632459_+	SINE	Alu	AluSx1
CAediting_1256663	chr18_21632460_+	SINE	Alu	AluSx1
CAediting_1256664	chr18_21632461_+	SINE	Alu	AluSx1
CAediting_1256665	chr18_21632463_+	SINE	Alu	AluSx1
CAediting_1256666	chr18_21632464_+	SINE	Alu	AluSx1
CAediting_1256667	chr18_21632466_+	SINE	Alu	AluSx1
CAediting_1256668	chr18_21632870_+	SINE	Alu	AluY
CAediting_1256669	chr18_21632890_+	SINE	Alu	AluY
CAediting_1256670	chr18_21632894_+	SINE	Alu	AluY
CAediting_1256671	chr18_21632906_+	SINE	Alu	AluY
CAediting_1256672	chr18_21632914_+	SINE	Alu	AluY
CAediting_1256673	chr18_21632925_+	SINE	Alu	AluY
CAediting_1256674	chr18_21632931_+	SINE	Alu	AluY
CAediting_1256675	chr18_21632955_+	SINE	Alu	AluY
CAediting_1256676	chr18_21632968_+	SINE	Alu	AluY
CAediting_1256677	chr18_21632977_+	SINE	Alu	AluY
CAediting_1256678	chr18_21632980_+	SINE	Alu	AluY
CAediting_1256679	chr18_21632985_+	SINE	Alu	AluY
CAediting_1256680	chr18_21632990_+	SINE	Alu	AluY
CAediting_1256681	chr18_21632992_+	SINE	Alu	AluY
CAediting_1256682	chr18_21633006_+	SINE	Alu	AluY
CAediting_1256683	chr18_21633026_+	SINE	Alu	AluY
CAediting_1256684	chr18_21633032_+	SINE	Alu	AluY
CAediting_1256685	chr18_21633035_+	SINE	Alu	AluY
CAediting_1256686	chr18_21633037_+	SINE	Alu	AluY
CAediting_1256687	chr18_21633049_+	SINE	Alu	AluY
CAediting_1256688	chr18_21633081_+	SINE	Alu	AluY
CAediting_1256689	chr18_21633089_+	SINE	Alu	AluY
CAediting_1256690	chr18_21633110_+	SINE	Alu	AluY
CAediting_1256691	chr18_21633111_+	SINE	Alu	AluY
CAediting_1256692	chr18_21633112_+	SINE	Alu	AluY
CAediting_1256693	chr18_21633124_+	SINE	Alu	AluY
CAediting_1256694	chr18_21633133_+	SINE	Alu	AluY

Top

RNA A-to-I editing events in the alternative splicing sites for SNRPD1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000167088.9.SNRPD1.

Correlation between RNA A-to-I editing and PSI for ENSG00000167088.9.SNRPD1.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for SNRPD1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

BRCA.CAediting_1256565.ENSG00000167088.SNRPD1.png
Soverview

LUSC.CAediting_1256637.ENSG00000167088.SNRPD1.png
Soverview

Top

Protein coding region RNA A-to-I editings for SNRPD1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for SNRPD1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for SNRPD1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for SNRPD1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LGG	CAediting_1256570	chr18_21631272_+	.	.	.	.	0.0290599203793587	0.259191962687286
LGG	CAediting_1256598	chr18_21632002_+	0.000258801202323979	0.397733371204347	.	.	.	.
LGG	CAediting_1256611	chr18_21632197_+	0.0188722168429879	0.135504326136514	.	.	.	.
BRCA	CAediting_1256611	chr18_21632197_+	4.38349452931184e-05	0.271240313037587	.	.	.	.
SKCM	CAediting_1256611	chr18_21632197_+	0.0285116650788719	0.224798559933688	.	.	.	.
LGG	CAediting_1256632	chr18_21632300_+	6.27155782488835e-08	0.543790739192732	.	.	.	.
BRCA	CAediting_1256632	chr18_21632300_+	0.00186205787781223	0.36550589961842	.	.	.	.
LGG	CAediting_1256634	chr18_21632306_+	0.00226108612274796	0.264559912667235	.	.	.	.
BRCA	CAediting_1256634	chr18_21632306_+	0.0315472201875304	0.239139086593461	.	.	.	.
LGG	CAediting_1256637	chr18_21632312_+	1.99705741027508e-05	0.270997265197072	.	.	.	.
BRCA	CAediting_1256637	chr18_21632312_+	1.04186270471167e-05	0.395082032946873	.	.	.	.
GBM	CAediting_1256637	chr18_21632312_+	1.53257225526001e-08	0.597390398964551	.	.	.	.
PCPG	CAediting_1256637	chr18_21632312_+	.	.	0.0377690900235865	0.280894991048533	.	.
SKCM	CAediting_1256637	chr18_21632312_+	1.21589425909741e-07	0.593318735771097	.	.	.	.
GBM	CAediting_1256639	chr18_21632339_+	0.0309319653955771	0.261957709193751	.	.	.	.

Top

Relation with cancer stages for SNRPD1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for SNRPD1

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
BRCA	CAediting_1256599	chr18_21632008_+	0.0121209769686172	0.0362175	120577
BRCA	CAediting_1256611	chr18_21632197_+	0.0262350632049579	0.0452731	0.0182631

Top

RelatedDrugs for SNRPD1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for SNRPD1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene