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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: SLC18A2 (CAeditome ID:6571) |
Gene summary for SLC18A2 |
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Gene information | Gene symbol | SLC18A2 | Gene ID | 6571 |
Gene name | solute carrier family 18 member A2 | |
Synonyms | PKDYS2|SVAT|SVMT|VAT2|VMAT2 | |
Cytomap | 10q25.3 | |
Type of gene | protein-coding | |
Description | synaptic vesicular amine transportermonoamine neurotransmitter transportersolute carrier family 18 (vesicular monoamine transporter), member 2synaptic vesicle amine transporter, brainsynaptic vesicle monoamine transporter, brainvesicle monoamine tran | |
Modification date | 20210518 | |
UniProtAcc | Q05940 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
SLC18A2 | GO:0005813 | Synaptic vesicular amine transporter | 0000052 |
SLC18A2 | GO:0043231 | Synaptic vesicular amine transporter | 0000052 |
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RNA A-to-I events for SLC18A2 |
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CAediting_784692(117258884, +), CAediting_784693(117258896, +), CAediting_784694(117261102, +), CAediting_784695(117261103, +), CAediting_784696(117261108, +), CAediting_784697(117261111, +), CAediting_784698(117261162, +), CAediting_784699(117261165, +), CAediting_784700(117261171, +), CAediting_784701(117261251, +), CAediting_784702(117261261, +), CAediting_784703(117261264, +), CAediting_784704(117261271, +), CAediting_784705(117261276, +), CAediting_784706(117261277, +), CAediting_784707(117261287, +), CAediting_784708(117261310, +), CAediting_784709(117261313, +), CAediting_784710(117262007, +), CAediting_784711(117262008, +), CAediting_784712(117262047, +), CAediting_784713(117262087, +), CAediting_784714(117262104, +), CAediting_784715(117262107, +), CAediting_784716(117262121, +), CAediting_784717(117262157, +), CAediting_784718(117262179, +), CAediting_784719(117262734, +), CAediting_784720(117262744, +), CAediting_784721(117262755, +), CAediting_784722(117262756, +), CAediting_784723(117262769, +), CAediting_784724(117262770, +), CAediting_784725(117262787, +), CAediting_784726(117262797, +), CAediting_784727(117262800, +), CAediting_784728(117264355, +), CAediting_784729(117264356, +), CAediting_784730(117264391, +), CAediting_784731(117264402, +), CAediting_784732(117264420, +), CAediting_784733(117264421, +), CAediting_784734(117264426, +), CAediting_784735(117265835, +), CAediting_784736(117265914, +), CAediting_784737(117265975, +), CAediting_784738(117265979, +), CAediting_784739(117265996, +), CAediting_784740(117265997, +), CAediting_784741(117266005, +), CAediting_784742(117266011, +), CAediting_784743(117266039, +), CAediting_784744(117266040, +), CAediting_784745(117268816, +), CAediting_784746(117268820, +), CAediting_784747(117268936, +), CAediting_784748(117268956, +), CAediting_784749(117268960, +), CAediting_784750(117268964, +), |
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RNA editing positional annotations for SLC18A2 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_784692 | chr10_117258884_+ | ncRNA_intronic |
CAediting_784693 | chr10_117258896_+ | ncRNA_intronic |
CAediting_784694 | chr10_117261102_+ | ncRNA_intronic |
CAediting_784695 | chr10_117261103_+ | ncRNA_intronic |
CAediting_784696 | chr10_117261108_+ | ncRNA_intronic |
CAediting_784697 | chr10_117261111_+ | ncRNA_intronic |
CAediting_784698 | chr10_117261162_+ | ncRNA_intronic |
CAediting_784699 | chr10_117261165_+ | ncRNA_intronic |
CAediting_784700 | chr10_117261171_+ | ncRNA_intronic |
CAediting_784701 | chr10_117261251_+ | ncRNA_intronic |
CAediting_784702 | chr10_117261261_+ | ncRNA_intronic |
CAediting_784703 | chr10_117261264_+ | ncRNA_intronic |
CAediting_784704 | chr10_117261271_+ | ncRNA_intronic |
CAediting_784705 | chr10_117261276_+ | ncRNA_intronic |
CAediting_784706 | chr10_117261277_+ | ncRNA_intronic |
CAediting_784707 | chr10_117261287_+ | ncRNA_intronic |
CAediting_784708 | chr10_117261310_+ | ncRNA_intronic |
CAediting_784709 | chr10_117261313_+ | ncRNA_intronic |
CAediting_784710 | chr10_117262007_+ | ncRNA_intronic |
CAediting_784711 | chr10_117262008_+ | ncRNA_intronic |
CAediting_784712 | chr10_117262047_+ | ncRNA_intronic |
CAediting_784713 | chr10_117262087_+ | ncRNA_intronic |
CAediting_784714 | chr10_117262104_+ | ncRNA_intronic |
CAediting_784715 | chr10_117262107_+ | ncRNA_intronic |
CAediting_784716 | chr10_117262121_+ | ncRNA_intronic |
CAediting_784717 | chr10_117262157_+ | ncRNA_intronic |
CAediting_784718 | chr10_117262179_+ | ncRNA_intronic |
CAediting_784719 | chr10_117262734_+ | ncRNA_intronic |
CAediting_784720 | chr10_117262744_+ | ncRNA_intronic |
CAediting_784721 | chr10_117262755_+ | ncRNA_intronic |
CAediting_784722 | chr10_117262756_+ | ncRNA_intronic |
CAediting_784723 | chr10_117262769_+ | ncRNA_intronic |
CAediting_784724 | chr10_117262770_+ | ncRNA_intronic |
CAediting_784725 | chr10_117262787_+ | ncRNA_intronic |
CAediting_784726 | chr10_117262797_+ | ncRNA_intronic |
CAediting_784727 | chr10_117262800_+ | ncRNA_intronic |
CAediting_784728 | chr10_117264355_+ | ncRNA_intronic |
CAediting_784729 | chr10_117264356_+ | ncRNA_intronic |
CAediting_784730 | chr10_117264391_+ | ncRNA_intronic |
CAediting_784731 | chr10_117264402_+ | ncRNA_intronic |
CAediting_784732 | chr10_117264420_+ | ncRNA_intronic |
CAediting_784733 | chr10_117264421_+ | ncRNA_intronic |
CAediting_784734 | chr10_117264426_+ | ncRNA_intronic |
CAediting_784735 | chr10_117265835_+ | ncRNA_intronic |
CAediting_784736 | chr10_117265914_+ | ncRNA_intronic |
CAediting_784737 | chr10_117265975_+ | ncRNA_intronic |
CAediting_784738 | chr10_117265979_+ | ncRNA_intronic |
CAediting_784739 | chr10_117265996_+ | ncRNA_intronic |
CAediting_784740 | chr10_117265997_+ | ncRNA_intronic |
CAediting_784741 | chr10_117266005_+ | ncRNA_intronic |
CAediting_784742 | chr10_117266011_+ | ncRNA_intronic |
CAediting_784743 | chr10_117266039_+ | ncRNA_intronic |
CAediting_784744 | chr10_117266040_+ | ncRNA_intronic |
CAediting_784745 | chr10_117268816_+ | ncRNA_intronic |
CAediting_784746 | chr10_117268820_+ | ncRNA_intronic |
CAediting_784747 | chr10_117268936_+ | ncRNA_intronic |
CAediting_784748 | chr10_117268956_+ | ncRNA_intronic |
CAediting_784749 | chr10_117268960_+ | ncRNA_intronic |
CAediting_784750 | chr10_117268964_+ | ncRNA_intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_784692 | chr10_117258884_+ | SINE | Alu | AluSx |
CAediting_784693 | chr10_117258896_+ | SINE | Alu | AluSx |
CAediting_784694 | chr10_117261102_+ | SINE | Alu | AluJr |
CAediting_784695 | chr10_117261103_+ | SINE | Alu | AluJr |
CAediting_784696 | chr10_117261108_+ | SINE | Alu | AluJr |
CAediting_784697 | chr10_117261111_+ | SINE | Alu | AluJr |
CAediting_784698 | chr10_117261162_+ | SINE | Alu | AluJr |
CAediting_784699 | chr10_117261165_+ | SINE | Alu | AluJr |
CAediting_784700 | chr10_117261171_+ | SINE | Alu | AluJr |
CAediting_784701 | chr10_117261251_+ | SINE | Alu | AluJr |
CAediting_784702 | chr10_117261261_+ | SINE | Alu | AluJr |
CAediting_784703 | chr10_117261264_+ | SINE | Alu | AluJr |
CAediting_784704 | chr10_117261271_+ | SINE | Alu | AluJr |
CAediting_784705 | chr10_117261276_+ | SINE | Alu | AluJr |
CAediting_784706 | chr10_117261277_+ | SINE | Alu | AluJr |
CAediting_784707 | chr10_117261287_+ | SINE | Alu | AluJr |
CAediting_784708 | chr10_117261310_+ | SINE | Alu | AluJr |
CAediting_784709 | chr10_117261313_+ | SINE | Alu | AluJr |
CAediting_784710 | chr10_117262007_+ | SINE | Alu | AluSg4 |
CAediting_784711 | chr10_117262008_+ | SINE | Alu | AluSg4 |
CAediting_784712 | chr10_117262047_+ | SINE | Alu | AluSg4 |
CAediting_784713 | chr10_117262087_+ | SINE | Alu | AluSg4 |
CAediting_784714 | chr10_117262104_+ | SINE | Alu | AluSg4 |
CAediting_784715 | chr10_117262107_+ | SINE | Alu | AluSg4 |
CAediting_784716 | chr10_117262121_+ | SINE | Alu | AluSg4 |
CAediting_784717 | chr10_117262157_+ | SINE | Alu | AluSg4 |
CAediting_784718 | chr10_117262179_+ | SINE | Alu | AluSg4 |
CAediting_784719 | chr10_117262734_+ | SINE | Alu | AluJb |
CAediting_784720 | chr10_117262744_+ | SINE | Alu | AluJb |
CAediting_784721 | chr10_117262755_+ | SINE | Alu | AluJb |
CAediting_784722 | chr10_117262756_+ | SINE | Alu | AluJb |
CAediting_784723 | chr10_117262769_+ | SINE | Alu | AluJb |
CAediting_784724 | chr10_117262770_+ | SINE | Alu | AluJb |
CAediting_784725 | chr10_117262787_+ | SINE | Alu | AluJb |
CAediting_784726 | chr10_117262797_+ | SINE | Alu | AluJb |
CAediting_784727 | chr10_117262800_+ | SINE | Alu | AluJb |
CAediting_784728 | chr10_117264355_+ | SINE | Alu | AluSx |
CAediting_784729 | chr10_117264356_+ | SINE | Alu | AluSx |
CAediting_784730 | chr10_117264391_+ | SINE | Alu | AluSx |
CAediting_784731 | chr10_117264402_+ | SINE | Alu | AluSx |
CAediting_784732 | chr10_117264420_+ | SINE | Alu | AluSx |
CAediting_784733 | chr10_117264421_+ | SINE | Alu | AluSx |
CAediting_784734 | chr10_117264426_+ | SINE | Alu | AluSx |
CAediting_784735 | chr10_117265835_+ | SINE | Alu | AluSx |
CAediting_784736 | chr10_117265914_+ | SINE | Alu | AluSx |
CAediting_784737 | chr10_117265975_+ | SINE | Alu | AluSx |
CAediting_784738 | chr10_117265979_+ | SINE | Alu | AluSx |
CAediting_784739 | chr10_117265996_+ | SINE | Alu | AluSx |
CAediting_784740 | chr10_117265997_+ | SINE | Alu | AluSx |
CAediting_784741 | chr10_117266005_+ | SINE | Alu | AluSx |
CAediting_784742 | chr10_117266011_+ | SINE | Alu | AluSx |
CAediting_784743 | chr10_117266039_+ | SINE | Alu | AluSx |
CAediting_784744 | chr10_117266040_+ | SINE | Alu | AluSx |
CAediting_784745 | chr10_117268816_+ | Simple_repeat | Simple_repeat | (TG)n |
CAediting_784746 | chr10_117268820_+ | Simple_repeat | Simple_repeat | (TG)n |
CAediting_784747 | chr10_117268936_+ | Simple_repeat | Simple_repeat | (ACACAT)n |
CAediting_784748 | chr10_117268956_+ | Simple_repeat | Simple_repeat | (ACACAT)n |
CAediting_784749 | chr10_117268960_+ | Simple_repeat | Simple_repeat | (ACACAT)n |
CAediting_784750 | chr10_117268964_+ | Simple_repeat | Simple_repeat | (ACACAT)n |
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RNA A-to-I editing events in the alternative splicing sites for SLC18A2 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SLC18A2 |
![]() * The grey color means N/A. |
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PCPG.CAediting_784729.ENSG00000165646.SLC18A2.png ![]() |
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Protein coding region RNA A-to-I editings for SLC18A2 |
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The effects of the RNA editing to the miRNA binding sites for SLC18A2 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for SLC18A2 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for SLC18A2 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for SLC18A2 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for SLC18A2 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for SLC18A2 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
SLC18A2 | Q05940 | DB00368 | Norepinephrine | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved |
SLC18A2 | Q05940 | DB00502 | Haloperidol | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved |
SLC18A2 | Q05940 | DB00988 | Dopamine | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved |
SLC18A2 | Q05940 | DB01089 | Deserpidine | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved |
SLC18A2 | Q05940 | DB06706 | Isometheptene | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved |
SLC18A2 | Q05940 | DB06714 | Propylhexedrine | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved |
SLC18A2 | Q05940 | DB00865 | Benzphetamine | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved|illicit |
SLC18A2 | Q05940 | DB01576 | Dextroamphetamine | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved|illicit |
SLC18A2 | Q05940 | DB01577 | Metamfetamine | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved|illicit |
SLC18A2 | Q05940 | DB00182 | Amphetamine | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved|illicit|investigational |
SLC18A2 | Q05940 | DB00206 | Reserpine | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved|investigational |
SLC18A2 | Q05940 | DB00579 | Mazindol | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved|investigational |
SLC18A2 | Q05940 | DB04844 | Tetrabenazine | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved|investigational |
SLC18A2 | Q05940 | DB05381 | Histamine | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved|investigational |
SLC18A2 | Q05940 | DB12161 | Deutetrabenazine | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved|investigational |
SLC18A2 | Q05940 | DB04821 | Nomifensine | Synaptic vesicular amine transporter | SmallMoleculeDrug | approved|withdrawn |
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RelatedDiseases for SLC18A2 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
SLC18A2 | C0011570 | Mental Depression | 5 | PSYGENET |
SLC18A2 | C0011581 | Depressive disorder | 5 | PSYGENET |
SLC18A2 | C0001973 | Alcoholic Intoxication, Chronic | 3 | PSYGENET |
SLC18A2 | C0005586 | Bipolar Disorder | 3 | PSYGENET |
SLC18A2 | C0036341 | Schizophrenia | 3 | PSYGENET |
SLC18A2 | C0027746 | Nerve Degeneration | 1 | CTD_human |
SLC18A2 | C0027765 | nervous system disorder | 1 | CTD_human |
SLC18A2 | C0030567 | Parkinson Disease | 1 | CTD_human |
SLC18A2 | C0236701 | Cocaine-induced mood disorder | 1 | PSYGENET |
SLC18A2 | C0242422 | Parkinsonian Disorders | 1 | CTD_human |
SLC18A2 | C0242423 | Ramsay Hunt Paralysis Syndrome | 1 | CTD_human |
SLC18A2 | C0270458 | Severe major depression with psychotic features | 1 | PSYGENET |
SLC18A2 | C0600427 | Cocaine Dependence | 1 | PSYGENET |
SLC18A2 | C0752097 | Autosomal Dominant Juvenile Parkinson Disease | 1 | CTD_human |
SLC18A2 | C0752098 | Autosomal Dominant Parkinsonism | 1 | CTD_human |
SLC18A2 | C0752100 | Autosomal Recessive Parkinsonism | 1 | CTD_human |
SLC18A2 | C0752101 | Parkinsonism, Experimental | 1 | CTD_human |
SLC18A2 | C0752104 | Familial Juvenile Parkinsonism | 1 | CTD_human |
SLC18A2 | C0752105 | Parkinsonism, Juvenile | 1 | CTD_human |
SLC18A2 | C1868675 | PARKINSON DISEASE 2, AUTOSOMAL RECESSIVE JUVENILE | 1 | CTD_human |
SLC18A2 | C4747991 | PARKINSONISM-DYSTONIA, INFANTILE, 2 | 1 | ORPHANET;UNIPROT |