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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: SNHG20 (CAeditome ID:654434)

Gene summary for SNHG20

check button Gene summary
Gene informationGene symbol

SNHG20

Gene ID

654434

Gene namesmall nucleolar RNA host gene 20
SynonymsC17orf86|LINC00338|NCRNA00338|SCARNA16HG
Cytomap

17q25.2

Type of genencRNA
Descriptionlong intergenic non-protein coding RNA 338small nucleolar RNA host gene 20 (non-protein coding)
Modification date20210524
UniProtAcc

.

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for SNHG20

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000234912.8

check button RNA A-to-I editing events in Cancer.
CAediting_1240384(77089738, +), CAediting_1240385(77089752, +), CAediting_1240386(77089760, +), CAediting_1240387(77089761, +), CAediting_1240388(77089830, +), CAediting_1240389(77089832, +), CAediting_1240390(77089835, +), CAediting_1240391(77089840, +), CAediting_1240392(77089845, +), CAediting_1240393(77089870, +), CAediting_1240394(77089910, +), CAediting_1240395(77089938, +), CAediting_1240396(77090012, +), CAediting_1240397(77090013, +), CAediting_1240398(77090064, +), CAediting_1240399(77090065, +), CAediting_1240400(77090073, +), CAediting_1240401(77090074, +), CAediting_1240402(77090079, +), CAediting_1240403(77090096, +), CAediting_1240404(77090100, +), CAediting_1240405(77090104, +), CAediting_1240406(77090114, +), CAediting_1240407(77090119, +), CAediting_1240408(77090127, +), CAediting_1240409(77090128, +), CAediting_1240410(77090150, +), CAediting_1240411(77090153, +), CAediting_1240412(77090180, +), CAediting_1240413(77090198, +), CAediting_1240414(77090204, +), CAediting_1240415(77090212, +), CAediting_1240416(77090213, +), CAediting_1240417(77090237, +), CAediting_1240418(77090280, +), CAediting_1240419(77090400, +), CAediting_1240420(77090408, +), CAediting_1240421(77090422, +), CAediting_1240422(77090473, +), CAediting_1240423(77090728, +), CAediting_1240424(77090734, +), CAediting_1240425(77090735, +), CAediting_1240426(77090751, +), CAediting_1240427(77090765, +), CAediting_1240428(77090780, +), CAediting_1240429(77090788, +), CAediting_1240430(77090826, +), CAediting_1240431(77090828, +), CAediting_1240432(77090829, +), CAediting_1240433(77090833, +), CAediting_1240434(77090834, +), CAediting_1240435(77090836, +), CAediting_1240436(77090837, +), CAediting_1240437(77090840, +), CAediting_1240438(77090855, +), CAediting_1240439(77090864, +), CAediting_1240440(77090868, +), CAediting_1240441(77090873, +), CAediting_1240442(77090930, +), CAediting_1240443(77090935, +), CAediting_1240444(77091108, +), CAediting_1240445(77091131, +), CAediting_1240446(77091143, +), CAediting_1240447(77091181, +), CAediting_1240448(77091187, +), CAediting_1240449(77091188, +), CAediting_1240450(77091205, +), CAediting_1240451(77091213, +), CAediting_1240452(77091217, +), CAediting_1240453(77091222, +), CAediting_1240454(77091227, +), CAediting_1240455(77091235, +), CAediting_1240456(77091240, +), CAediting_1240457(77091254, +), CAediting_1240458(77091262, +), CAediting_1240459(77091271, +), CAediting_1240460(77091297, +), CAediting_1240461(77091308, +), CAediting_1240462(77091349, +), CAediting_1240463(77091350, +), CAediting_1240464(77091362, +), CAediting_1240465(77091832, +), CAediting_1240466(77091835, +), CAediting_1240467(77091844, +), CAediting_1240468(77091911, +), CAediting_1240469(77091912, +), CAediting_1240470(77091951, +), CAediting_1240471(77091969, +), CAediting_1240472(77091977, +), CAediting_1240473(77091978, +), CAediting_1240474(77091992, +), CAediting_1240475(77091995, +), CAediting_1240476(77092034, +), CAediting_1240477(77092043, +), CAediting_1240478(77092048, +), CAediting_1240479(77092061, +), CAediting_1240480(77092069, +), CAediting_1240481(77092070, +), CAediting_1240482(77092071, +), CAediting_1240483(77092083, +), CAediting_1240484(77092085, +), CAediting_1240485(77092693, +), CAediting_1240486(77092694, +), CAediting_1240487(77092747, +), CAediting_1240488(77092763, +), CAediting_1240489(77092796, +), CAediting_1240490(77092801, +), CAediting_1240491(77092827, +), CAediting_1240492(77092828, +), CAediting_1240493(77092837, +), CAediting_1240494(77092844, +), CAediting_1240495(77092854, +), CAediting_1240496(77092868, +), CAediting_1240497(77092869, +), CAediting_1240498(77092893, +), CAediting_1240499(77092898, +), CAediting_1240500(77092903, +), CAediting_1240501(77092942, +), CAediting_1240502(77093790, +), CAediting_1240503(77093823, +), CAediting_1240504(77093851, +), CAediting_1240505(77093862, +), CAediting_1240506(77093873, +), CAediting_1240507(77094062, +), CAediting_1240508(77094066, +), CAediting_1240509(77094094, +), CAediting_1240510(77094108, +), CAediting_1240511(77094118, +), CAediting_1240512(77094156, +), CAediting_1240513(77094158, +), CAediting_1240514(77094178, +), CAediting_1240515(77094182, +), CAediting_1240516(77094198, +), CAediting_1240517(77094201, +), CAediting_1240518(77094215, +), CAediting_1240519(77094218, +), CAediting_1240520(77094227, +), CAediting_1240521(77094257, +), CAediting_1240522(77094261, +), CAediting_1240523(77094278, +), CAediting_1240524(77094279, +), CAediting_1240525(77094280, +), CAediting_1240526(77094292, +), CAediting_1240527(77094492, +), CAediting_1240528(77094498, +), CAediting_1240529(77094509, +), CAediting_1240530(77094521, +), CAediting_1240531(77094540, +), CAediting_1240532(77094554, +), CAediting_1240533(77094561, +), CAediting_1240534(77094567, +), CAediting_1240535(77094568, +), CAediting_1240536(77094585, +), CAediting_1240537(77094593, +), CAediting_1240538(77094594, +), CAediting_1240539(77094597, +), CAediting_1240540(77094598, +), CAediting_1240541(77094607, +), CAediting_1240542(77094613, +), CAediting_1240543(77094629, +), CAediting_1240544(77094634, +), CAediting_1240545(77094650, +), CAediting_1240546(77094652, +), CAediting_1240547(77094656, +), CAediting_1240548(77094675, +), CAediting_1240549(77094740, +),

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RNA editing positional annotations for SNHG20 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1240384chr17_77089738_+ncRNA_exonic
CAediting_1240385chr17_77089752_+ncRNA_exonic
CAediting_1240386chr17_77089760_+ncRNA_exonic
CAediting_1240387chr17_77089761_+ncRNA_exonic
CAediting_1240388chr17_77089830_+ncRNA_exonic
CAediting_1240389chr17_77089832_+ncRNA_exonic
CAediting_1240390chr17_77089835_+ncRNA_exonic
CAediting_1240391chr17_77089840_+ncRNA_exonic
CAediting_1240392chr17_77089845_+ncRNA_exonic
CAediting_1240393chr17_77089870_+ncRNA_exonic
CAediting_1240394chr17_77089910_+ncRNA_exonic
CAediting_1240395chr17_77089938_+ncRNA_exonic
CAediting_1240396chr17_77090012_+ncRNA_exonic
CAediting_1240397chr17_77090013_+ncRNA_exonic
CAediting_1240398chr17_77090064_+ncRNA_exonic
CAediting_1240399chr17_77090065_+ncRNA_exonic
CAediting_1240400chr17_77090073_+ncRNA_exonic
CAediting_1240401chr17_77090074_+ncRNA_exonic
CAediting_1240402chr17_77090079_+ncRNA_exonic
CAediting_1240403chr17_77090096_+ncRNA_exonic
CAediting_1240404chr17_77090100_+ncRNA_intronic
CAediting_1240405chr17_77090104_+ncRNA_intronic
CAediting_1240406chr17_77090114_+ncRNA_intronic
CAediting_1240407chr17_77090119_+ncRNA_intronic
CAediting_1240408chr17_77090127_+ncRNA_intronic
CAediting_1240409chr17_77090128_+ncRNA_intronic
CAediting_1240410chr17_77090150_+ncRNA_intronic
CAediting_1240411chr17_77090153_+ncRNA_intronic
CAediting_1240412chr17_77090180_+ncRNA_intronic
CAediting_1240413chr17_77090198_+ncRNA_intronic
CAediting_1240414chr17_77090204_+ncRNA_intronic
CAediting_1240415chr17_77090212_+ncRNA_intronic
CAediting_1240416chr17_77090213_+ncRNA_intronic
CAediting_1240417chr17_77090237_+ncRNA_intronic
CAediting_1240418chr17_77090280_+ncRNA_intronic
CAediting_1240419chr17_77090400_+ncRNA_intronic
CAediting_1240420chr17_77090408_+ncRNA_intronic
CAediting_1240421chr17_77090422_+ncRNA_intronic
CAediting_1240422chr17_77090473_+ncRNA_intronic
CAediting_1240423chr17_77090728_+ncRNA_intronic
CAediting_1240424chr17_77090734_+ncRNA_intronic
CAediting_1240425chr17_77090735_+ncRNA_intronic
CAediting_1240426chr17_77090751_+ncRNA_intronic
CAediting_1240427chr17_77090765_+ncRNA_intronic
CAediting_1240428chr17_77090780_+ncRNA_intronic
CAediting_1240429chr17_77090788_+ncRNA_intronic
CAediting_1240430chr17_77090826_+ncRNA_intronic
CAediting_1240431chr17_77090828_+ncRNA_intronic
CAediting_1240432chr17_77090829_+ncRNA_intronic
CAediting_1240433chr17_77090833_+ncRNA_intronic
CAediting_1240434chr17_77090834_+ncRNA_intronic
CAediting_1240435chr17_77090836_+ncRNA_intronic
CAediting_1240436chr17_77090837_+ncRNA_intronic
CAediting_1240437chr17_77090840_+ncRNA_intronic
CAediting_1240438chr17_77090855_+ncRNA_intronic
CAediting_1240439chr17_77090864_+ncRNA_intronic
CAediting_1240440chr17_77090868_+ncRNA_intronic
CAediting_1240441chr17_77090873_+ncRNA_intronic
CAediting_1240442chr17_77090930_+ncRNA_intronic
CAediting_1240443chr17_77090935_+ncRNA_intronic
CAediting_1240444chr17_77091108_+ncRNA_intronic
CAediting_1240445chr17_77091131_+ncRNA_intronic
CAediting_1240446chr17_77091143_+ncRNA_intronic
CAediting_1240447chr17_77091181_+ncRNA_intronic
CAediting_1240448chr17_77091187_+ncRNA_intronic
CAediting_1240449chr17_77091188_+ncRNA_intronic
CAediting_1240450chr17_77091205_+ncRNA_intronic
CAediting_1240451chr17_77091213_+ncRNA_intronic
CAediting_1240452chr17_77091217_+ncRNA_intronic
CAediting_1240453chr17_77091222_+ncRNA_intronic
CAediting_1240454chr17_77091227_+ncRNA_intronic
CAediting_1240455chr17_77091235_+ncRNA_intronic
CAediting_1240456chr17_77091240_+ncRNA_intronic
CAediting_1240457chr17_77091254_+ncRNA_intronic
CAediting_1240458chr17_77091262_+ncRNA_intronic
CAediting_1240459chr17_77091271_+ncRNA_intronic
CAediting_1240460chr17_77091297_+ncRNA_intronic
CAediting_1240461chr17_77091308_+ncRNA_intronic
CAediting_1240462chr17_77091349_+ncRNA_intronic
CAediting_1240463chr17_77091350_+ncRNA_intronic
CAediting_1240464chr17_77091362_+ncRNA_intronic
CAediting_1240465chr17_77091832_+ncRNA_intronic
CAediting_1240466chr17_77091835_+ncRNA_intronic
CAediting_1240467chr17_77091844_+ncRNA_intronic
CAediting_1240468chr17_77091911_+ncRNA_intronic
CAediting_1240469chr17_77091912_+ncRNA_intronic
CAediting_1240470chr17_77091951_+ncRNA_intronic
CAediting_1240471chr17_77091969_+ncRNA_intronic
CAediting_1240472chr17_77091977_+ncRNA_intronic
CAediting_1240473chr17_77091978_+ncRNA_intronic
CAediting_1240474chr17_77091992_+ncRNA_intronic
CAediting_1240475chr17_77091995_+ncRNA_intronic
CAediting_1240476chr17_77092034_+ncRNA_intronic
CAediting_1240477chr17_77092043_+ncRNA_intronic
CAediting_1240478chr17_77092048_+ncRNA_intronic
CAediting_1240479chr17_77092061_+ncRNA_intronic
CAediting_1240480chr17_77092069_+ncRNA_intronic
CAediting_1240481chr17_77092070_+ncRNA_intronic
CAediting_1240482chr17_77092071_+ncRNA_intronic
CAediting_1240483chr17_77092083_+ncRNA_intronic
CAediting_1240484chr17_77092085_+ncRNA_intronic
CAediting_1240485chr17_77092693_+ncRNA_intronic
CAediting_1240486chr17_77092694_+ncRNA_intronic
CAediting_1240487chr17_77092747_+ncRNA_intronic
CAediting_1240488chr17_77092763_+ncRNA_intronic
CAediting_1240489chr17_77092796_+ncRNA_intronic
CAediting_1240490chr17_77092801_+ncRNA_intronic
CAediting_1240491chr17_77092827_+ncRNA_intronic
CAediting_1240492chr17_77092828_+ncRNA_intronic
CAediting_1240493chr17_77092837_+ncRNA_intronic
CAediting_1240494chr17_77092844_+ncRNA_intronic
CAediting_1240495chr17_77092854_+ncRNA_intronic
CAediting_1240496chr17_77092868_+ncRNA_intronic
CAediting_1240497chr17_77092869_+ncRNA_intronic
CAediting_1240498chr17_77092893_+ncRNA_intronic
CAediting_1240499chr17_77092898_+ncRNA_intronic
CAediting_1240500chr17_77092903_+ncRNA_intronic
CAediting_1240501chr17_77092942_+ncRNA_intronic
CAediting_1240502chr17_77093790_+ncRNA_exonic
CAediting_1240503chr17_77093823_+ncRNA_exonic
CAediting_1240504chr17_77093851_+ncRNA_exonic
CAediting_1240505chr17_77093862_+ncRNA_exonic
CAediting_1240506chr17_77093873_+ncRNA_exonic
CAediting_1240507chr17_77094062_+ncRNA_exonic
CAediting_1240508chr17_77094066_+ncRNA_exonic
CAediting_1240509chr17_77094094_+ncRNA_exonic
CAediting_1240510chr17_77094108_+ncRNA_exonic
CAediting_1240511chr17_77094118_+ncRNA_exonic
CAediting_1240512chr17_77094156_+ncRNA_exonic
CAediting_1240513chr17_77094158_+ncRNA_exonic
CAediting_1240514chr17_77094178_+ncRNA_exonic
CAediting_1240515chr17_77094182_+ncRNA_exonic
CAediting_1240516chr17_77094198_+ncRNA_exonic
CAediting_1240517chr17_77094201_+ncRNA_exonic
CAediting_1240518chr17_77094215_+ncRNA_exonic
CAediting_1240519chr17_77094218_+ncRNA_exonic
CAediting_1240520chr17_77094227_+ncRNA_exonic
CAediting_1240521chr17_77094257_+ncRNA_exonic
CAediting_1240522chr17_77094261_+ncRNA_exonic
CAediting_1240523chr17_77094278_+ncRNA_exonic
CAediting_1240524chr17_77094279_+ncRNA_exonic
CAediting_1240525chr17_77094280_+ncRNA_exonic
CAediting_1240526chr17_77094292_+ncRNA_exonic
CAediting_1240527chr17_77094492_+ncRNA_exonic
CAediting_1240528chr17_77094498_+ncRNA_exonic
CAediting_1240529chr17_77094509_+ncRNA_exonic
CAediting_1240530chr17_77094521_+ncRNA_exonic
CAediting_1240531chr17_77094540_+ncRNA_exonic
CAediting_1240532chr17_77094554_+ncRNA_exonic
CAediting_1240533chr17_77094561_+ncRNA_exonic
CAediting_1240534chr17_77094567_+ncRNA_exonic
CAediting_1240535chr17_77094568_+ncRNA_exonic
CAediting_1240536chr17_77094585_+ncRNA_exonic
CAediting_1240537chr17_77094593_+ncRNA_exonic
CAediting_1240538chr17_77094594_+ncRNA_exonic
CAediting_1240539chr17_77094597_+ncRNA_exonic
CAediting_1240540chr17_77094598_+ncRNA_exonic
CAediting_1240541chr17_77094607_+ncRNA_exonic
CAediting_1240542chr17_77094613_+ncRNA_exonic
CAediting_1240543chr17_77094629_+ncRNA_exonic
CAediting_1240544chr17_77094634_+ncRNA_exonic
CAediting_1240545chr17_77094650_+ncRNA_exonic
CAediting_1240546chr17_77094652_+ncRNA_exonic
CAediting_1240547chr17_77094656_+ncRNA_exonic
CAediting_1240548chr17_77094675_+ncRNA_exonic
CAediting_1240549chr17_77094740_+ncRNA_exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1240384chr17_77089738_+SINEAluAluSq
CAediting_1240385chr17_77089752_+SINEAluAluSq
CAediting_1240386chr17_77089760_+SINEAluAluSq
CAediting_1240387chr17_77089761_+SINEAluAluSq
CAediting_1240388chr17_77089830_+SINEAluAluSq
CAediting_1240389chr17_77089832_+SINEAluAluSq
CAediting_1240390chr17_77089835_+SINEAluAluSq
CAediting_1240391chr17_77089840_+SINEAluAluSq
CAediting_1240392chr17_77089845_+SINEAluAluSq
CAediting_1240393chr17_77089870_+SINEAluAluSq
CAediting_1240394chr17_77089910_+SINEAluAluSq
CAediting_1240395chr17_77089938_+SINEAluAluSq
CAediting_1240396chr17_77090012_+SINEAluAluSq
CAediting_1240397chr17_77090013_+SINEAluAluSq
CAediting_1240398chr17_77090064_+SINEAluAluSx
CAediting_1240399chr17_77090065_+SINEAluAluSx
CAediting_1240400chr17_77090073_+SINEAluAluSx
CAediting_1240401chr17_77090074_+SINEAluAluSx
CAediting_1240402chr17_77090079_+SINEAluAluSx
CAediting_1240403chr17_77090096_+SINEAluAluSx
CAediting_1240404chr17_77090100_+SINEAluAluSx
CAediting_1240405chr17_77090104_+SINEAluAluSx
CAediting_1240406chr17_77090114_+SINEAluAluSx
CAediting_1240407chr17_77090119_+SINEAluAluSx
CAediting_1240408chr17_77090127_+SINEAluAluSx
CAediting_1240409chr17_77090128_+SINEAluAluSx
CAediting_1240410chr17_77090150_+SINEAluAluSx
CAediting_1240411chr17_77090153_+SINEAluAluSx
CAediting_1240412chr17_77090180_+SINEAluAluSx
CAediting_1240413chr17_77090198_+SINEAluAluSx
CAediting_1240414chr17_77090204_+SINEAluAluSx
CAediting_1240415chr17_77090212_+SINEAluAluSx
CAediting_1240416chr17_77090213_+SINEAluAluSx
CAediting_1240417chr17_77090237_+SINEAluAluSx
CAediting_1240418chr17_77090280_+SINEAluAluSx
CAediting_1240419chr17_77090400_+SINEAluFLAM_C
CAediting_1240420chr17_77090408_+SINEAluFLAM_C
CAediting_1240421chr17_77090422_+SINEAluFLAM_C
CAediting_1240422chr17_77090473_+SINEAluFLAM_C
CAediting_1240423chr17_77090728_+SINEAluAluJo
CAediting_1240424chr17_77090734_+SINEAluAluJo
CAediting_1240425chr17_77090735_+SINEAluAluJo
CAediting_1240426chr17_77090751_+SINEAluAluJo
CAediting_1240427chr17_77090765_+SINEAluAluJo
CAediting_1240428chr17_77090780_+SINEAluAluJo
CAediting_1240429chr17_77090788_+SINEAluAluJo
CAediting_1240430chr17_77090826_+SINEAluAluJo
CAediting_1240431chr17_77090828_+SINEAluAluJo
CAediting_1240432chr17_77090829_+SINEAluAluJo
CAediting_1240433chr17_77090833_+SINEAluAluJo
CAediting_1240434chr17_77090834_+SINEAluAluJo
CAediting_1240435chr17_77090836_+SINEAluAluJo
CAediting_1240436chr17_77090837_+SINEAluAluJo
CAediting_1240437chr17_77090840_+SINEAluAluJo
CAediting_1240438chr17_77090855_+SINEAluAluJo
CAediting_1240439chr17_77090864_+SINEAluAluJo
CAediting_1240440chr17_77090868_+SINEAluAluJo
CAediting_1240441chr17_77090873_+SINEAluAluJo
CAediting_1240442chr17_77090930_+SINEAluAluJo
CAediting_1240443chr17_77090935_+SINEAluAluJo
CAediting_1240444chr17_77091108_+SINEAluAluSx
CAediting_1240445chr17_77091131_+SINEAluAluSx
CAediting_1240446chr17_77091143_+SINEAluAluSx
CAediting_1240447chr17_77091181_+SINEAluAluSx
CAediting_1240448chr17_77091187_+SINEAluAluSx
CAediting_1240449chr17_77091188_+SINEAluAluSx
CAediting_1240450chr17_77091205_+SINEAluAluSx
CAediting_1240451chr17_77091213_+SINEAluAluSx
CAediting_1240452chr17_77091217_+SINEAluAluSx
CAediting_1240453chr17_77091222_+SINEAluAluSx
CAediting_1240454chr17_77091227_+SINEAluAluSx
CAediting_1240455chr17_77091235_+SINEAluAluSx
CAediting_1240456chr17_77091240_+SINEAluAluSx
CAediting_1240457chr17_77091254_+SINEAluAluSx
CAediting_1240458chr17_77091262_+SINEAluAluSx
CAediting_1240459chr17_77091271_+SINEAluAluSx
CAediting_1240460chr17_77091297_+SINEAluAluSx
CAediting_1240461chr17_77091308_+SINEAluAluSx
CAediting_1240462chr17_77091349_+SINEAluAluSx
CAediting_1240463chr17_77091350_+SINEAluAluSx
CAediting_1240464chr17_77091362_+SINEAluAluSx
CAediting_1240465chr17_77091832_+SINEAluAluSx
CAediting_1240466chr17_77091835_+SINEAluAluSx
CAediting_1240467chr17_77091844_+SINEAluAluSx
CAediting_1240468chr17_77091911_+SINEAluAluSx
CAediting_1240469chr17_77091912_+SINEAluAluSx
CAediting_1240470chr17_77091951_+SINEAluAluSx
CAediting_1240471chr17_77091969_+SINEAluAluSx
CAediting_1240472chr17_77091977_+SINEAluAluSx
CAediting_1240473chr17_77091978_+SINEAluAluSx
CAediting_1240474chr17_77091992_+SINEAluAluSx
CAediting_1240475chr17_77091995_+SINEAluAluSx
CAediting_1240476chr17_77092034_+SINEAluAluSx
CAediting_1240477chr17_77092043_+SINEAluAluSx
CAediting_1240478chr17_77092048_+SINEAluAluSx
CAediting_1240479chr17_77092061_+SINEAluAluSx
CAediting_1240480chr17_77092069_+SINEAluAluSx
CAediting_1240481chr17_77092070_+SINEAluAluSx
CAediting_1240482chr17_77092071_+SINEAluAluSx
CAediting_1240483chr17_77092083_+SINEAluAluSx
CAediting_1240484chr17_77092085_+SINEAluAluSx
CAediting_1240485chr17_77092693_+SINEAluAluSp
CAediting_1240486chr17_77092694_+SINEAluAluSp
CAediting_1240487chr17_77092747_+SINEAluAluSp
CAediting_1240488chr17_77092763_+SINEAluAluSp
CAediting_1240489chr17_77092796_+SINEAluAluSp
CAediting_1240490chr17_77092801_+SINEAluAluSp
CAediting_1240491chr17_77092827_+SINEAluAluSp
CAediting_1240492chr17_77092828_+SINEAluAluSp
CAediting_1240493chr17_77092837_+SINEAluAluSp
CAediting_1240494chr17_77092844_+SINEAluAluSp
CAediting_1240495chr17_77092854_+SINEAluAluSp
CAediting_1240496chr17_77092868_+SINEAluAluSp
CAediting_1240497chr17_77092869_+SINEAluAluSp
CAediting_1240498chr17_77092893_+SINEAluAluSp
CAediting_1240499chr17_77092898_+SINEAluAluSp
CAediting_1240500chr17_77092903_+SINEAluAluSp
CAediting_1240501chr17_77092942_+SINEAluAluSp
CAediting_1240502chr17_77093790_+SINEAluFLAM_C
CAediting_1240503chr17_77093823_+SINEAluFLAM_C
CAediting_1240504chr17_77093851_+SINEAluFLAM_C
CAediting_1240505chr17_77093862_+SINEAluFLAM_C
CAediting_1240506chr17_77093873_+SINEAluFLAM_C
CAediting_1240507chr17_77094062_+SINEAluAluSq
CAediting_1240508chr17_77094066_+SINEAluAluSq
CAediting_1240509chr17_77094094_+SINEAluAluSq
CAediting_1240510chr17_77094108_+SINEAluAluSq
CAediting_1240511chr17_77094118_+SINEAluAluSq
CAediting_1240512chr17_77094156_+SINEAluAluSq
CAediting_1240513chr17_77094158_+SINEAluAluSq
CAediting_1240514chr17_77094178_+SINEAluAluSq
CAediting_1240515chr17_77094182_+SINEAluAluSq
CAediting_1240516chr17_77094198_+SINEAluAluSq
CAediting_1240517chr17_77094201_+SINEAluAluSq
CAediting_1240518chr17_77094215_+SINEAluAluSq
CAediting_1240519chr17_77094218_+SINEAluAluSq
CAediting_1240520chr17_77094227_+SINEAluAluSq
CAediting_1240521chr17_77094257_+SINEAluAluSq
CAediting_1240522chr17_77094261_+SINEAluAluSq
CAediting_1240523chr17_77094278_+SINEAluAluSq
CAediting_1240524chr17_77094279_+SINEAluAluSq
CAediting_1240525chr17_77094280_+SINEAluAluSq
CAediting_1240526chr17_77094292_+SINEAluAluSq
CAediting_1240527chr17_77094492_+SINEAluAluSx
CAediting_1240528chr17_77094498_+SINEAluAluSx
CAediting_1240529chr17_77094509_+SINEAluAluSx
CAediting_1240530chr17_77094521_+SINEAluAluSx
CAediting_1240531chr17_77094540_+SINEAluAluSx
CAediting_1240532chr17_77094554_+SINEAluAluSx
CAediting_1240533chr17_77094561_+SINEAluAluSx
CAediting_1240534chr17_77094567_+SINEAluAluSx
CAediting_1240535chr17_77094568_+SINEAluAluSx
CAediting_1240536chr17_77094585_+SINEAluAluSx
CAediting_1240537chr17_77094593_+SINEAluAluSx
CAediting_1240538chr17_77094594_+SINEAluAluSx
CAediting_1240539chr17_77094597_+SINEAluAluSx
CAediting_1240540chr17_77094598_+SINEAluAluSx
CAediting_1240541chr17_77094607_+SINEAluAluSx
CAediting_1240542chr17_77094613_+SINEAluAluSx
CAediting_1240543chr17_77094629_+SINEAluAluSx
CAediting_1240544chr17_77094634_+SINEAluAluSx
CAediting_1240545chr17_77094650_+SINEAluAluSx
CAediting_1240546chr17_77094652_+SINEAluAluSx
CAediting_1240547chr17_77094656_+SINEAluAluSx
CAediting_1240548chr17_77094675_+SINEAluAluSx
CAediting_1240549chr17_77094740_+SINEAluAluSx

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RNA A-to-I editing events in the alternative splicing sites for SNHG20

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000234912.8.SNHG20.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000234912.8.SNHG20.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SNHG20

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for SNHG20

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for SNHG20

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1240513chr17_77094158_+ENSG00000234912.8ENST00000565256.1hsa-miR-100-5p77094155770941617mer-m87709414077094162165-26.09
CAediting_1240513chr17_77094158_+ENSG00000234912.8ENST00000565256.1hsa-miR-99a-5p77094155770941617mer-m87709414077094162165-24.66
CAediting_1240513chr17_77094158_+ENSG00000234912.8ENST00000565256.1hsa-miR-99b-5p77094155770941617mer-m87709414077094162159-28.55
CAediting_1240513chr17_77094158_+ENSG00000234912.8ENST00000566583.4hsa-miR-100-5p77094155770941617mer-m87709414077094162165-26.09
CAediting_1240513chr17_77094158_+ENSG00000234912.8ENST00000566583.4hsa-miR-99a-5p77094155770941617mer-m87709414077094162165-24.66
CAediting_1240513chr17_77094158_+ENSG00000234912.8ENST00000566583.4hsa-miR-99b-5p77094155770941617mer-m87709414077094162159-28.55
CAediting_1240533chr17_77094561_+ENSG00000234912.8ENST00000565256.1hsa-miR-1247-3p77094557770945637mer-m87709454077094564151-26.5
CAediting_1240533chr17_77094561_+ENSG00000234912.8ENST00000566583.4hsa-miR-1247-3p77094557770945637mer-m87709454077094564151-26.5
CAediting_1240535chr17_77094568_+ENSG00000234912.8ENST00000565256.1hsa-miR-453977094563770945686mer7709455077094569145-20.67
CAediting_1240535chr17_77094568_+ENSG00000234912.8ENST00000565256.1hsa-miR-607877094565770945728mer-1a7709455477094572149-21.5
CAediting_1240535chr17_77094568_+ENSG00000234912.8ENST00000566583.4hsa-miR-453977094563770945686mer7709455077094569145-20.67
CAediting_1240535chr17_77094568_+ENSG00000234912.8ENST00000566583.4hsa-miR-607877094565770945728mer-1a7709455477094572149-21.5
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000565256.1hsa-miR-4661-5p77094629770946357mer-m87709461377094636149-18.05
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000565256.1hsa-miR-548ae-3p77094633770946397mer-m87709462077094640141-6.06
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000565256.1hsa-miR-548ah-3p77094633770946397mer-m87709462177094640149-6.32
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000565256.1hsa-miR-548aj-3p77094633770946397mer-m87709462077094640141-6.96
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000565256.1hsa-miR-548am-3p77094633770946397mer-m87709462177094640149-6.47
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000565256.1hsa-miR-548aq-3p77094633770946397mer-m87709461977094640141-6.06
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000565256.1hsa-miR-548j-3p77094633770946397mer-m87709462077094640141-6.06
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000565256.1hsa-miR-548x-3p77094633770946397mer-m87709462177094640141-6.96
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000565256.1hsa-miR-7844-5p77094631770946377mer-m87709461777094638156-17.01
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000566583.4hsa-miR-4661-5p77094629770946357mer-m87709461377094636149-18.05
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000566583.4hsa-miR-548ae-3p77094633770946397mer-m87709462077094640141-6.06
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000566583.4hsa-miR-548ah-3p77094633770946397mer-m87709462177094640149-6.32
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000566583.4hsa-miR-548aj-3p77094633770946397mer-m87709462077094640141-6.96
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000566583.4hsa-miR-548am-3p77094633770946397mer-m87709462177094640149-6.47
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000566583.4hsa-miR-548aq-3p77094633770946397mer-m87709461977094640141-6.06
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000566583.4hsa-miR-548j-3p77094633770946397mer-m87709462077094640141-6.06
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000566583.4hsa-miR-548x-3p77094633770946397mer-m87709462177094640141-6.96
CAediting_1240544chr17_77094634_+ENSG00000234912.8ENST00000566583.4hsa-miR-7844-5p77094631770946377mer-m87709461777094638156-17.01
CAediting_1240547chr17_77094656_+ENSG00000234912.8ENST00000565256.1hsa-miR-340-3p77094651770946577mer-m87709463777094658149-17.69
CAediting_1240547chr17_77094656_+ENSG00000234912.8ENST00000565256.1hsa-miR-6827-3p77094651770946577mer-m87709463877094658153-17.53
CAediting_1240547chr17_77094656_+ENSG00000234912.8ENST00000566583.4hsa-miR-340-3p77094651770946577mer-m87709463777094658149-17.69
CAediting_1240547chr17_77094656_+ENSG00000234912.8ENST00000566583.4hsa-miR-6827-3p77094651770946577mer-m87709463877094658153-17.53
CAediting_1240510chr17_77094108_+ENSG00000234912.8ENST00000565256.1hsa-miR-4717-5p77094105770941117mer-m87709409177094112163-27.64
CAediting_1240510chr17_77094108_+ENSG00000234912.8ENST00000566583.4hsa-miR-4717-5p77094105770941117mer-m87709409177094112163-27.64
CAediting_1240515chr17_77094182_+ENSG00000234912.8ENST00000565256.1hsa-miR-1207-3p77094176770941838mer-1a7709416677094183144-14.68
CAediting_1240515chr17_77094182_+ENSG00000234912.8ENST00000565256.1hsa-miR-34a-3p77094179770941857mer-m87709416577094186140-12.54
CAediting_1240515chr17_77094182_+ENSG00000234912.8ENST00000566583.4hsa-miR-1207-3p77094176770941838mer-1a7709416677094183144-14.68
CAediting_1240515chr17_77094182_+ENSG00000234912.8ENST00000566583.4hsa-miR-34a-3p77094179770941857mer-m87709416577094186140-12.54
CAediting_1240519chr17_77094218_+ENSG00000234912.8ENST00000565256.1hsa-miR-433-5p77094213770942197mer-m87709419777094220162-26
CAediting_1240519chr17_77094218_+ENSG00000234912.8ENST00000566583.4hsa-miR-433-5p77094213770942197mer-m87709419777094220162-26
CAediting_1240520chr17_77094227_+ENSG00000234912.8ENST00000565256.1hsa-miR-3940-3p77094225770942317mer-m87709421477094232144-24.53
CAediting_1240520chr17_77094227_+ENSG00000234912.8ENST00000566583.4hsa-miR-3940-3p77094225770942317mer-m87709421477094232144-24.53
CAediting_1240521chr17_77094257_+ENSG00000234912.8ENST00000565256.1hsa-miR-4776-5p77094255770942617mer-m87709423977094262151-24.89
CAediting_1240521chr17_77094257_+ENSG00000234912.8ENST00000565256.1hsa-miR-4800-5p77094256770942627mer-m87709423877094263147-24.71
CAediting_1240521chr17_77094257_+ENSG00000234912.8ENST00000566583.4hsa-miR-4776-5p77094255770942617mer-m87709423977094262151-24.89
CAediting_1240521chr17_77094257_+ENSG00000234912.8ENST00000566583.4hsa-miR-4800-5p77094256770942627mer-m87709423877094263147-24.71
CAediting_1240522chr17_77094261_+ENSG00000234912.8ENST00000565256.1hsa-miR-393777094259770942657mer-m87709424777094266144-23.68
CAediting_1240522chr17_77094261_+ENSG00000234912.8ENST00000566583.4hsa-miR-393777094259770942657mer-m87709424777094266144-23.68
CAediting_1240523chr17_77094278_+ENSG00000234912.8ENST00000565256.1hsa-miR-6771-5p77094273770942808mer-1a7709426177094280161-31.74
CAediting_1240523chr17_77094278_+ENSG00000234912.8ENST00000566583.4hsa-miR-6771-5p77094273770942808mer-1a7709426177094280161-31.74
CAediting_1240525chr17_77094280_+ENSG00000234912.8ENST00000565256.1hsa-miR-3189-3p77094275770942817mer-m87709425977094282145-23.27
CAediting_1240525chr17_77094280_+ENSG00000234912.8ENST00000565256.1hsa-miR-6813-3p77094276770942827mer-m87709426377094283140-12.88
CAediting_1240525chr17_77094280_+ENSG00000234912.8ENST00000566583.4hsa-miR-3189-3p77094275770942817mer-m87709425977094282145-23.27
CAediting_1240525chr17_77094280_+ENSG00000234912.8ENST00000566583.4hsa-miR-6813-3p77094276770942827mer-m87709426377094283140-12.88
CAediting_1240526chr17_77094292_+ENSG00000234912.8ENST00000565256.1hsa-miR-106a-3p77094289770942946mer7709427477094295141-21.13
CAediting_1240526chr17_77094292_+ENSG00000234912.8ENST00000566583.4hsa-miR-106a-3p77094289770942946mer7709427477094295141-21.13
CAediting_1240529chr17_77094509_+ENSG00000234912.8ENST00000565256.1hsa-miR-3940-3p77094507770945137mer-m87709449477094514141-23.25
CAediting_1240529chr17_77094509_+ENSG00000234912.8ENST00000566583.4hsa-miR-3940-3p77094507770945137mer-m87709449477094514141-23.25
CAediting_1240532chr17_77094554_+ENSG00000234912.8ENST00000565256.1hsa-miR-25-5p77094550770945567mer-m87709453877094557149-19.55
CAediting_1240532chr17_77094554_+ENSG00000234912.8ENST00000565256.1hsa-miR-65877094549770945557mer-m87709452877094556145-28.78
CAediting_1240532chr17_77094554_+ENSG00000234912.8ENST00000566583.4hsa-miR-25-5p77094550770945567mer-m87709453877094557149-19.55
CAediting_1240532chr17_77094554_+ENSG00000234912.8ENST00000566583.4hsa-miR-65877094549770945557mer-m87709452877094556145-28.78
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000565256.1hsa-miR-6771-5p77094588770945947mer-m87709457677094595160-34.33
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000566583.4hsa-miR-6771-5p77094588770945947mer-m87709457677094595160-34.33
CAediting_1240538chr17_77094594_+ENSG00000234912.8ENST00000565256.1hsa-miR-6852-5p77094590770945956mer7709457777094596149-26.62
CAediting_1240538chr17_77094594_+ENSG00000234912.8ENST00000566583.4hsa-miR-6852-5p77094590770945956mer7709457777094596149-26.62
CAediting_1240539chr17_77094597_+ENSG00000234912.8ENST00000565256.1hsa-miR-3614-5p77094591770945988mer-1a7709457577094598152-20.58
CAediting_1240539chr17_77094597_+ENSG00000234912.8ENST00000565256.1hsa-miR-4704-3p77094595770946017mer-m87709458177094602142-13.1
CAediting_1240539chr17_77094597_+ENSG00000234912.8ENST00000566583.4hsa-miR-3614-5p77094591770945988mer-1a7709457577094598152-20.58
CAediting_1240539chr17_77094597_+ENSG00000234912.8ENST00000566583.4hsa-miR-4704-3p77094595770946017mer-m87709458177094602142-13.1
CAediting_1240540chr17_77094598_+ENSG00000234912.8ENST00000565256.1hsa-miR-569077094595770946017mer-m87709458277094602145-16.74
CAediting_1240540chr17_77094598_+ENSG00000234912.8ENST00000566583.4hsa-miR-569077094595770946017mer-m87709458277094602145-16.74
CAediting_1240548chr17_77094675_+ENSG00000234912.8ENST00000565256.1hsa-miR-3940-3p77094673770946797mer-m87709466277094680144-24.53
CAediting_1240548chr17_77094675_+ENSG00000234912.8ENST00000566583.4hsa-miR-3940-3p77094673770946797mer-m87709466277094680144-24.53
CAediting_1240549chr17_77094740_+ENSG00000234912.8ENST00000565256.1hsa-miR-106a-3p77094737770947426mer7709472277094743141-21.13
CAediting_1240549chr17_77094740_+ENSG00000234912.8ENST00000566583.4hsa-miR-106a-3p77094737770947426mer7709472277094743141-21.13
CAediting_1240524chr17_77094279_+ENSG00000234912.8ENST00000565256.1hsa-miR-32677094275770942817mer-m87709426377094282140-15.33
CAediting_1240524chr17_77094279_+ENSG00000234912.8ENST00000565256.1hsa-miR-330-5p77094275770942817mer-m87709426177094282140-22.45
CAediting_1240524chr17_77094279_+ENSG00000234912.8ENST00000565256.1hsa-miR-431477094274770942807mer-m87709426477094281140-18.79
CAediting_1240524chr17_77094279_+ENSG00000234912.8ENST00000565256.1hsa-miR-514a-5p77094276770942827mer-m87709426377094283154-19.31
CAediting_1240524chr17_77094279_+ENSG00000234912.8ENST00000566583.4hsa-miR-32677094275770942817mer-m87709426377094282140-15.33
CAediting_1240524chr17_77094279_+ENSG00000234912.8ENST00000566583.4hsa-miR-330-5p77094275770942817mer-m87709426177094282140-22.45
CAediting_1240524chr17_77094279_+ENSG00000234912.8ENST00000566583.4hsa-miR-431477094274770942807mer-m87709426477094281140-18.79
CAediting_1240524chr17_77094279_+ENSG00000234912.8ENST00000566583.4hsa-miR-514a-5p77094276770942827mer-m87709426377094283154-19.31
CAediting_1240542chr17_77094613_+ENSG00000234912.8ENST00000565256.1hsa-miR-4787-3p77094610770946167mer-m87709459477094617140-18.74
CAediting_1240542chr17_77094613_+ENSG00000234912.8ENST00000565256.1hsa-miR-6720-3p77094608770946158mer-1a7709459477094615148-20.15
CAediting_1240542chr17_77094613_+ENSG00000234912.8ENST00000566583.4hsa-miR-4787-3p77094610770946167mer-m87709459477094617140-18.74
CAediting_1240542chr17_77094613_+ENSG00000234912.8ENST00000566583.4hsa-miR-6720-3p77094608770946158mer-1a7709459477094615148-20.15

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1240522chr17_77094261_+ENSG00000234912.8ENST00000565256.1hsa-miR-1211477094258770942647mer-m87709424677094265152-28.83
CAediting_1240542chr17_77094613_+ENSG00000234912.8ENST00000565256.1hsa-miR-1271-3p77094608770946158mer-1a7709459677094615155-21.03
CAediting_1240523chr17_77094278_+ENSG00000234912.8ENST00000565256.1hsa-miR-30b-3p77094272770942798mer-1a7709425877094279147-18
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000565256.1hsa-miR-30b-3p77094587770945948mer-1a7709457377094594151-15.38
CAediting_1240522chr17_77094261_+ENSG00000234912.8ENST00000565256.1hsa-miR-316577094257770942637mer-m87709424577094264145-17.91
CAediting_1240531chr17_77094540_+ENSG00000234912.8ENST00000565256.1hsa-miR-317477094537770945426mer7709452377094543142-21.71
CAediting_1240520chr17_77094227_+ENSG00000234912.8ENST00000565256.1hsa-miR-3190-5p77094222770942287mer-m87709421077094229147-18.34
CAediting_1240548chr17_77094675_+ENSG00000234912.8ENST00000565256.1hsa-miR-3190-5p77094670770946767mer-m87709465977094677149-18.16
CAediting_1240523chr17_77094278_+ENSG00000234912.8ENST00000565256.1hsa-miR-3689a-3p77094272770942798mer-1a7709425877094279141-19.53
CAediting_1240533chr17_77094561_+ENSG00000234912.8ENST00000565256.1hsa-miR-3689a-3p77094555770945617mer-m87709454277094562154-25.34
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000565256.1hsa-miR-3689a-3p77094587770945948mer-1a7709457477094594147-18.72
CAediting_1240523chr17_77094278_+ENSG00000234912.8ENST00000565256.1hsa-miR-3689b-3p77094272770942798mer-1a7709425877094279141-19.58
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000565256.1hsa-miR-3689b-3p77094587770945948mer-1a7709457477094594147-17.55
CAediting_1240523chr17_77094278_+ENSG00000234912.8ENST00000565256.1hsa-miR-3689c77094272770942798mer-1a7709425877094279141-19.58
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000565256.1hsa-miR-3689c77094587770945948mer-1a7709457477094594147-17.55
CAediting_1240514chr17_77094178_+ENSG00000234912.8ENST00000565256.1hsa-miR-448677094173770941797mer-m87709416577094180145-26.26
CAediting_1240536chr17_77094585_+ENSG00000234912.8ENST00000565256.1hsa-miR-4649-3p77094580770945867mer-m87709456777094587140-14.11
CAediting_1240545chr17_77094650_+ENSG00000234912.8ENST00000565256.1hsa-miR-4684-5p77094648770946547mer-m87709463477094655151-12.03
CAediting_1240546chr17_77094652_+ENSG00000234912.8ENST00000565256.1hsa-miR-4684-5p77094648770946547mer-m87709463477094655151-12.03
CAediting_1240509chr17_77094094_+ENSG00000234912.8ENST00000565256.1hsa-miR-508-5p77094090770940967mer-m87709407577094097154-24.9
CAediting_1240520chr17_77094227_+ENSG00000234912.8ENST00000565256.1hsa-miR-548s77094221770942277mer-m87709420777094228143-12.36
CAediting_1240548chr17_77094675_+ENSG00000234912.8ENST00000565256.1hsa-miR-548s77094669770946757mer-m87709465377094676147-13.53
CAediting_1240542chr17_77094613_+ENSG00000234912.8ENST00000565256.1hsa-miR-550a-3-5p77094608770946158mer-1a7709459677094615140-13.99
CAediting_1240542chr17_77094613_+ENSG00000234912.8ENST00000565256.1hsa-miR-550a-5p77094608770946158mer-1a7709459377094615140-17.77
CAediting_1240542chr17_77094613_+ENSG00000234912.8ENST00000565256.1hsa-miR-550b-2-5p77094609770946157mer-m87709459577094616145-17.48
CAediting_1240517chr17_77094201_+ENSG00000234912.8ENST00000565256.1hsa-miR-593-3p77094201770942066mer7709418977094207140-18.96
CAediting_1240545chr17_77094650_+ENSG00000234912.8ENST00000565256.1hsa-miR-593-3p77094650770946567mer-1a7709463877094656140-19.02
CAediting_1240546chr17_77094652_+ENSG00000234912.8ENST00000565256.1hsa-miR-593-3p77094650770946567mer-1a7709463877094656140-19.02
CAediting_1240532chr17_77094554_+ENSG00000234912.8ENST00000565256.1hsa-miR-613477094552770945587mer-m87709454277094559150-19.69
CAediting_1240509chr17_77094094_+ENSG00000234912.8ENST00000565256.1hsa-miR-6512-3p77094088770940947mer-m87709407477094095140-16.75
CAediting_1240509chr17_77094094_+ENSG00000234912.8ENST00000565256.1hsa-miR-6720-5p77094088770940947mer-m87709407077094095146-26.87
CAediting_1240523chr17_77094278_+ENSG00000234912.8ENST00000565256.1hsa-miR-6779-5p77094272770942798mer-1a7709425677094279143-22.97
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000565256.1hsa-miR-6779-5p77094587770945948mer-1a7709457677094594148-22.58
CAediting_1240533chr17_77094561_+ENSG00000234912.8ENST00000565256.1hsa-miR-6780a-5p77094555770945617mer-m87709453977094562143-24.97
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000565256.1hsa-miR-6780a-5p77094587770945948mer-1a7709457177094594152-25.37
CAediting_1240531chr17_77094540_+ENSG00000234912.8ENST00000565256.1hsa-miR-6807-5p77094534770945407mer-m87709452077094541148-19.37
CAediting_1240532chr17_77094554_+ENSG00000234912.8ENST00000565256.1hsa-miR-6880-5p77094550770945567mer-m87709453677094557145-23.27
CAediting_1240536chr17_77094585_+ENSG00000234912.8ENST00000565256.1hsa-miR-7160-5p77094581770945877mer-m87709456877094588146-20.4
CAediting_1240509chr17_77094094_+ENSG00000234912.8ENST00000565256.1hsa-miR-766-3p77094089770940957mer-m87709407177094096150-26.31
CAediting_1240532chr17_77094554_+ENSG00000234912.8ENST00000565256.1hsa-miR-7847-3p77094549770945557mer-m87709453577094556146-19.47
CAediting_1240523chr17_77094278_+ENSG00000234912.8ENST00000565256.1hsa-miR-887-5p77094273770942808mer-1a7709425977094280148-16.93
CAediting_1240524chr17_77094279_+ENSG00000234912.8ENST00000565256.1hsa-miR-887-5p77094273770942808mer-1a7709425977094280148-16.93
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000565256.1hsa-miR-887-5p77094588770945947mer-m87709457677094595143-19.73
CAediting_1240538chr17_77094594_+ENSG00000234912.8ENST00000565256.1hsa-miR-887-5p77094588770945947mer-m87709457677094595143-19.73
CAediting_1240522chr17_77094261_+ENSG00000234912.8ENST00000566583.4hsa-miR-1211477094258770942647mer-m87709424677094265152-28.83
CAediting_1240542chr17_77094613_+ENSG00000234912.8ENST00000566583.4hsa-miR-1271-3p77094608770946158mer-1a7709459677094615155-21.03
CAediting_1240523chr17_77094278_+ENSG00000234912.8ENST00000566583.4hsa-miR-30b-3p77094272770942798mer-1a7709425877094279147-18
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000566583.4hsa-miR-30b-3p77094587770945948mer-1a7709457377094594151-15.38
CAediting_1240522chr17_77094261_+ENSG00000234912.8ENST00000566583.4hsa-miR-316577094257770942637mer-m87709424577094264145-17.91
CAediting_1240531chr17_77094540_+ENSG00000234912.8ENST00000566583.4hsa-miR-317477094537770945426mer7709452377094543142-21.71
CAediting_1240548chr17_77094675_+ENSG00000234912.8ENST00000566583.4hsa-miR-3190-5p77094670770946767mer-m87709465977094677149-18.16
CAediting_1240520chr17_77094227_+ENSG00000234912.8ENST00000566583.4hsa-miR-3190-5p77094222770942287mer-m87709421077094229147-18.34
CAediting_1240523chr17_77094278_+ENSG00000234912.8ENST00000566583.4hsa-miR-3689a-3p77094272770942798mer-1a7709425877094279141-19.53
CAediting_1240533chr17_77094561_+ENSG00000234912.8ENST00000566583.4hsa-miR-3689a-3p77094555770945617mer-m87709454277094562154-25.34
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000566583.4hsa-miR-3689a-3p77094587770945948mer-1a7709457477094594147-18.72
CAediting_1240523chr17_77094278_+ENSG00000234912.8ENST00000566583.4hsa-miR-3689b-3p77094272770942798mer-1a7709425877094279141-19.58
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000566583.4hsa-miR-3689b-3p77094587770945948mer-1a7709457477094594147-17.55
CAediting_1240523chr17_77094278_+ENSG00000234912.8ENST00000566583.4hsa-miR-3689c77094272770942798mer-1a7709425877094279141-19.58
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000566583.4hsa-miR-3689c77094587770945948mer-1a7709457477094594147-17.55
CAediting_1240514chr17_77094178_+ENSG00000234912.8ENST00000566583.4hsa-miR-448677094173770941797mer-m87709416577094180145-26.26
CAediting_1240536chr17_77094585_+ENSG00000234912.8ENST00000566583.4hsa-miR-4649-3p77094580770945867mer-m87709456777094587140-14.11
CAediting_1240545chr17_77094650_+ENSG00000234912.8ENST00000566583.4hsa-miR-4684-5p77094648770946547mer-m87709463477094655151-12.03
CAediting_1240546chr17_77094652_+ENSG00000234912.8ENST00000566583.4hsa-miR-4684-5p77094648770946547mer-m87709463477094655151-12.03
CAediting_1240509chr17_77094094_+ENSG00000234912.8ENST00000566583.4hsa-miR-508-5p77094090770940967mer-m87709407577094097154-24.9
CAediting_1240548chr17_77094675_+ENSG00000234912.8ENST00000566583.4hsa-miR-548s77094669770946757mer-m87709465377094676147-13.53
CAediting_1240520chr17_77094227_+ENSG00000234912.8ENST00000566583.4hsa-miR-548s77094221770942277mer-m87709420777094228143-12.36
CAediting_1240542chr17_77094613_+ENSG00000234912.8ENST00000566583.4hsa-miR-550a-3-5p77094608770946158mer-1a7709459677094615140-13.99
CAediting_1240542chr17_77094613_+ENSG00000234912.8ENST00000566583.4hsa-miR-550a-5p77094608770946158mer-1a7709459377094615140-17.77
CAediting_1240542chr17_77094613_+ENSG00000234912.8ENST00000566583.4hsa-miR-550b-2-5p77094609770946157mer-m87709459577094616145-17.48
CAediting_1240528chr17_77094498_+ENSG00000234912.8ENST00000566583.4hsa-miR-5586-3p77094496770945027mer-m87709448277094503143-13.88
CAediting_1240545chr17_77094650_+ENSG00000234912.8ENST00000566583.4hsa-miR-593-3p77094650770946567mer-1a7709463877094656140-19.02
CAediting_1240546chr17_77094652_+ENSG00000234912.8ENST00000566583.4hsa-miR-593-3p77094650770946567mer-1a7709463877094656140-19.02
CAediting_1240517chr17_77094201_+ENSG00000234912.8ENST00000566583.4hsa-miR-593-3p77094201770942066mer7709418977094207140-18.96
CAediting_1240532chr17_77094554_+ENSG00000234912.8ENST00000566583.4hsa-miR-613477094552770945587mer-m87709454277094559150-19.69
CAediting_1240509chr17_77094094_+ENSG00000234912.8ENST00000566583.4hsa-miR-6512-3p77094088770940947mer-m87709407477094095140-16.75
CAediting_1240509chr17_77094094_+ENSG00000234912.8ENST00000566583.4hsa-miR-6720-5p77094088770940947mer-m87709407077094095146-26.87
CAediting_1240523chr17_77094278_+ENSG00000234912.8ENST00000566583.4hsa-miR-6779-5p77094272770942798mer-1a7709425677094279143-22.97
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000566583.4hsa-miR-6779-5p77094587770945948mer-1a7709457677094594148-22.58
CAediting_1240533chr17_77094561_+ENSG00000234912.8ENST00000566583.4hsa-miR-6780a-5p77094555770945617mer-m87709453977094562143-24.97
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000566583.4hsa-miR-6780a-5p77094587770945948mer-1a7709457177094594152-25.37
CAediting_1240531chr17_77094540_+ENSG00000234912.8ENST00000566583.4hsa-miR-6807-5p77094534770945407mer-m87709452077094541148-19.37
CAediting_1240532chr17_77094554_+ENSG00000234912.8ENST00000566583.4hsa-miR-6880-5p77094550770945567mer-m87709453677094557145-23.27
CAediting_1240536chr17_77094585_+ENSG00000234912.8ENST00000566583.4hsa-miR-7160-5p77094581770945877mer-m87709456877094588146-20.4
CAediting_1240509chr17_77094094_+ENSG00000234912.8ENST00000566583.4hsa-miR-766-3p77094089770940957mer-m87709407177094096150-26.31
CAediting_1240532chr17_77094554_+ENSG00000234912.8ENST00000566583.4hsa-miR-7847-3p77094549770945557mer-m87709453577094556146-19.47
CAediting_1240523chr17_77094278_+ENSG00000234912.8ENST00000566583.4hsa-miR-887-5p77094273770942808mer-1a7709425977094280148-16.93
CAediting_1240524chr17_77094279_+ENSG00000234912.8ENST00000566583.4hsa-miR-887-5p77094273770942808mer-1a7709425977094280148-16.93
CAediting_1240537chr17_77094593_+ENSG00000234912.8ENST00000566583.4hsa-miR-887-5p77094588770945947mer-m87709457677094595143-19.73
CAediting_1240538chr17_77094594_+ENSG00000234912.8ENST00000566583.4hsa-miR-887-5p77094588770945947mer-m87709457677094595143-19.73

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000234912.8ENST00000565256.1hsa-miR-624-3p77094824770948307mer-m87709481077094831152-20.44
CAediting_980496chr14_31014685_-ENSG00000234912.8ENST00000566583.4hsa-miR-624-3p77094824770948307mer-m87709481077094831152-20.44
CAediting_980496chr14_31014685_-ENSG00000234912.8ENST00000568363.4hsa-miR-624-3p77093401770934077mer-m87709338677093408157-19.73
CAediting_1229414chr17_67471546_+ENSG00000234912.8ENST00000565256.1hsa-miR-548aa77094679770946857mer-m87709466277094686140-10.86
CAediting_580943chr7_100356700_+ENSG00000234912.8ENST00000565256.1hsa-miR-6840-3p77094133770941397mer-m87709412477094140141-26.85
CAediting_1229414chr17_67471546_+ENSG00000234912.8ENST00000566583.4hsa-miR-548aa77094679770946857mer-m87709466277094686140-10.86
CAediting_580943chr7_100356700_+ENSG00000234912.8ENST00000566583.4hsa-miR-6840-3p77094133770941397mer-m87709412477094140141-26.85

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_468389chr6_31355314_-ENSG00000234912.8ENST00000565256.1hsa-miR-6891-5p77094783770947897mer-m87709477277094790148-14.58
CAediting_468389chr6_31355314_-ENSG00000234912.8ENST00000566583.4hsa-miR-6891-5p77094783770947897mer-m87709477277094790148-14.58

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SNHG20

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for SNHG20

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
LGGCAediting_1240411chr17_77090153_+..0.0277188527526770.2842681957648090.04850448539551510.255828749810501

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Relation with cancer stages for SNHG20

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
KIRCpathologic_stageCAediting_1240411chr17_77090153_+0.03148252406034440.287808048123525

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Relation with survival for SNHG20

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for SNHG20

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SNHG20

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource