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Editing gene: SLC3A2 (CAeditome ID:6520)

Gene summary for SLC3A2

Gene summary

Gene information	Gene symbol	SLC3A2
	Gene ID	6520
	Gene name	solute carrier family 3 member 2
	Synonyms	4F2\|4F2HC\|4T2HC\|CD98\|CD98HC\|MDU1\|NACAE
	Cytomap	11q12.3
	Type of gene	protein-coding
	Description	4F2 cell-surface antigen heavy chainCD98 heavy chainantigen defined by monoclonal antibody 4F2, heavy chainantigen identified by monoclonal antibodies 4F2, TRA1.10, TROP4, and T43lymphocyte activation antigen 4F2 large subunitmonoclonal antibody 44D7
	Modification date	20210518
	UniProtAcc	P08195
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
SLC3A2	GO:0003725	4F2 cell-surface antigen heavy chain	21266579
SLC3A2	GO:0005654	4F2 cell-surface antigen heavy chain	0000052
SLC3A2	GO:0005886	4F2 cell-surface antigen heavy chain	0000052
SLC3A2	GO:0005886	4F2 cell-surface antigen heavy chain	12270127
SLC3A2	GO:0005886	4F2 cell-surface antigen heavy chain	25998567
SLC3A2	GO:0009986	4F2 cell-surface antigen heavy chain	25063885
SLC3A2	GO:0005886	4F2 cell-surface antigen heavy chain	23137377
SLC3A2	GO:0005886	4F2 cell-surface antigen heavy chain	28112518
SLC3A2	GO:0016323	4F2 cell-surface antigen heavy chain	31791063
SLC3A2	GO:0016324	4F2 cell-surface antigen heavy chain	31791063
SLC3A2	GO:1990184	4F2 cell-surface antigen heavy chain	30867591

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RNA A-to-I events for SLC3A2

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000168003.15

RNA A-to-I editing events in Cancer.

CAediting_820143(62857239, +), CAediting_820144(62857446, +), CAediting_820145(62857447, +), CAediting_820146(62857471, +), CAediting_820147(62857489, +), CAediting_820148(62857498, +), CAediting_820149(62857533, +), CAediting_820150(62857539, +), CAediting_820151(62857543, +), CAediting_820152(62857569, +), CAediting_820153(62857591, +), CAediting_820154(62857592, +), CAediting_820155(62857610, +), CAediting_820156(62857646, +), CAediting_820157(62859572, +), CAediting_820158(62859573, +), CAediting_820159(62860384, +), CAediting_820160(62861269, +), CAediting_820161(62861356, +), CAediting_820162(62861726, +), CAediting_820163(62861730, +), CAediting_820164(62861732, +), CAediting_820165(62861745, +), CAediting_820166(62861763, +), CAediting_820167(62861794, +), CAediting_820168(62861795, +), CAediting_820169(62861804, +), CAediting_820170(62861808, +), CAediting_820171(62862115, +), CAediting_820172(62862131, +), CAediting_820173(62862140, +), CAediting_820174(62862152, +), CAediting_820175(62862156, +), CAediting_820176(62862197, +), CAediting_820177(62862219, +), CAediting_820178(62862226, +), CAediting_820179(62862388, +), CAediting_820180(62862435, +), CAediting_820181(62862440, +), CAediting_820182(62862442, +), CAediting_820183(62862463, +), CAediting_820184(62862923, +), CAediting_820185(62863082, +), CAediting_820186(62863093, +), CAediting_820187(62863101, +), CAediting_820188(62863135, +), CAediting_820189(62863173, +), CAediting_820190(62863183, +), CAediting_820191(62864869, +), CAediting_820192(62865391, +), CAediting_820193(62865397, +), CAediting_820194(62865433, +), CAediting_820195(62865442, +), CAediting_820196(62865445, +), CAediting_820197(62865455, +), CAediting_820198(62867132, +), CAediting_820199(62868021, +), CAediting_820200(62868022, +), CAediting_820201(62868930, +), CAediting_820202(62868999, +), CAediting_820203(62869003, +), CAediting_820204(62869011, +), CAediting_820205(62869026, +), CAediting_820206(62869028, +), CAediting_820207(62869040, +), CAediting_820208(62869082, +), CAediting_820209(62871597, +), CAediting_820210(62871601, +), CAediting_820211(62871627, +), CAediting_820212(62871644, +), CAediting_820213(62872368, +), CAediting_820214(62872376, +), CAediting_820215(62872408, +), CAediting_820216(62872434, +), CAediting_820217(62875025, +), CAediting_820218(62876789, +), CAediting_820219(62876799, +), CAediting_820220(62876811, +), CAediting_820221(62876817, +), CAediting_820222(62876846, +), CAediting_820223(62877270, +), CAediting_820224(62877333, +), CAediting_820225(62878338, +), CAediting_820226(62879327, +), CAediting_820227(62882535, +), CAediting_820228(62882554, +), CAediting_820229(62882559, +), CAediting_820230(62882577, +), CAediting_820231(62882589, +), CAediting_820232(62882614, +), CAediting_820233(62882624, +), CAediting_820234(62882642, +), CAediting_820235(62882690, +), CAediting_820236(62886016, +), CAediting_820237(62886034, +), CAediting_820238(62886035, +), CAediting_820239(62886040, +), CAediting_820240(62886070, +), CAediting_820241(62886089, +), CAediting_820242(62886090, +), CAediting_820243(62886099, +), CAediting_820244(62886106, +), CAediting_820245(62886114, +), CAediting_820246(62886118, +), CAediting_820247(62886128, +), CAediting_820248(62886130, +), CAediting_820249(62886131, +), CAediting_820250(62886138, +), CAediting_820251(62886139, +), CAediting_820252(62886140, +), CAediting_820253(62886143, +), CAediting_820254(62886169, +), CAediting_820255(62886175, +), CAediting_820256(62886179, +), CAediting_820257(62886192, +), CAediting_820258(62886196, +), CAediting_820259(62886197, +), CAediting_820260(62886201, +), CAediting_820261(62886210, +), CAediting_820262(62886211, +), CAediting_820263(62886221, +), CAediting_820264(62886230, +), CAediting_820265(62886234, +), CAediting_820266(62886235, +), CAediting_820267(62886254, +), CAediting_820268(62886259, +), CAediting_820269(62886271, +), CAediting_820270(62886303, +), CAediting_820271(62886307, +), CAediting_820272(62886471, +), CAediting_820273(62886477, +), CAediting_820274(62886495, +), CAediting_820275(62886509, +), CAediting_820276(62886523, +), CAediting_820277(62886528, +), CAediting_820278(62886533, +), CAediting_820279(62886545, +), CAediting_820280(62886561, +), CAediting_820281(62886567, +), CAediting_820282(62886657, +), CAediting_820283(62886664, +), CAediting_820284(62886689, +), CAediting_820285(62886690, +), CAediting_820286(62886696, +), CAediting_820287(62886716, +), CAediting_820288(62886719, +), CAediting_820289(62886729, +), CAediting_820290(62886731, +), CAediting_820291(62886787, +), CAediting_820292(62886808, +), CAediting_820293(62886861, +), CAediting_820294(62886873, +), CAediting_820295(62886958, +), CAediting_820296(62886973, +), CAediting_820297(62886974, +), CAediting_820298(62886999, +), CAediting_820299(62887000, +), CAediting_820300(62887012, +), CAediting_820301(62887447, +), CAediting_820302(62887448, +), CAediting_820303(62887453, +), CAediting_820304(62887470, +), CAediting_820305(62887493, +), CAediting_820306(62887494, +), CAediting_820307(62887507, +), CAediting_820308(62887512, +), CAediting_820309(62887517, +), CAediting_820310(62887526, +), CAediting_820311(62887542, +), CAediting_820312(62887547, +), CAediting_820313(62887553, +), CAediting_820314(62887554, +), CAediting_820315(62887555, +), CAediting_820316(62887558, +), CAediting_820317(62887588, +), CAediting_820318(62887592, +), CAediting_820319(62887605, +), CAediting_820320(62887609, +), CAediting_820321(62887615, +), CAediting_820322(62887623, +), CAediting_820323(62887624, +), CAediting_820324(62887628, +), CAediting_820325(62887635, +), CAediting_820326(62887639, +), CAediting_820327(62887644, +), CAediting_820328(62887647, +), CAediting_820329(62887648, +), CAediting_820330(62887653, +), CAediting_820331(62887668, +), CAediting_820332(62887684, +), CAediting_820333(62887797, +), CAediting_820334(62887812, +), CAediting_820335(62887816, +), CAediting_820336(62887824, +), CAediting_820337(62887846, +), CAediting_820338(62887856, +), CAediting_820339(62887860, +), CAediting_820340(62887867, +), CAediting_820341(62887873, +), CAediting_820342(62887892, +), CAediting_820343(62887910, +), CAediting_820344(62887919, +), CAediting_820345(62887929, +), CAediting_820346(62887932, +), CAediting_820347(62887934, +), CAediting_820348(62887954, +), CAediting_820349(62887958, +), CAediting_820350(62887959, +), CAediting_820351(62887976, +), CAediting_820352(62887979, +), CAediting_820353(62887986, +), CAediting_820354(62888005, +), CAediting_820355(62888016, +), CAediting_820356(62888017, +), CAediting_820357(62888030, +), CAediting_820358(62888031, +), CAediting_820359(62888034, +), CAediting_820360(62888035, +), CAediting_820361(62888057, +), CAediting_820362(62888071, +),

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RNA editing positional annotations for SLC3A2 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_820143	chr11_62857239_+	intronic
CAediting_820144	chr11_62857446_+	intronic
CAediting_820145	chr11_62857447_+	intronic
CAediting_820146	chr11_62857471_+	intronic
CAediting_820147	chr11_62857489_+	intronic
CAediting_820148	chr11_62857498_+	intronic
CAediting_820149	chr11_62857533_+	intronic
CAediting_820150	chr11_62857539_+	intronic
CAediting_820151	chr11_62857543_+	intronic
CAediting_820152	chr11_62857569_+	intronic
CAediting_820153	chr11_62857591_+	intronic
CAediting_820154	chr11_62857592_+	intronic
CAediting_820155	chr11_62857610_+	intronic
CAediting_820156	chr11_62857646_+	intronic
CAediting_820157	chr11_62859572_+	intronic
CAediting_820158	chr11_62859573_+	intronic
CAediting_820159	chr11_62860384_+	intronic
CAediting_820160	chr11_62861269_+	intronic
CAediting_820161	chr11_62861356_+	intronic
CAediting_820162	chr11_62861726_+	intronic
CAediting_820163	chr11_62861730_+	intronic
CAediting_820164	chr11_62861732_+	intronic
CAediting_820165	chr11_62861745_+	intronic
CAediting_820166	chr11_62861763_+	intronic
CAediting_820167	chr11_62861794_+	intronic
CAediting_820168	chr11_62861795_+	intronic
CAediting_820169	chr11_62861804_+	intronic
CAediting_820170	chr11_62861808_+	intronic
CAediting_820171	chr11_62862115_+	intronic
CAediting_820172	chr11_62862131_+	intronic
CAediting_820173	chr11_62862140_+	intronic
CAediting_820174	chr11_62862152_+	intronic
CAediting_820175	chr11_62862156_+	intronic
CAediting_820176	chr11_62862197_+	intronic
CAediting_820177	chr11_62862219_+	intronic
CAediting_820178	chr11_62862226_+	intronic
CAediting_820179	chr11_62862388_+	intronic
CAediting_820180	chr11_62862435_+	intronic
CAediting_820181	chr11_62862440_+	intronic
CAediting_820182	chr11_62862442_+	intronic
CAediting_820183	chr11_62862463_+	intronic
CAediting_820184	chr11_62862923_+	intronic
CAediting_820185	chr11_62863082_+	intronic
CAediting_820186	chr11_62863093_+	intronic
CAediting_820187	chr11_62863101_+	intronic
CAediting_820188	chr11_62863135_+	intronic
CAediting_820189	chr11_62863173_+	intronic
CAediting_820190	chr11_62863183_+	intronic
CAediting_820191	chr11_62864869_+	intronic
CAediting_820192	chr11_62865391_+	intronic
CAediting_820193	chr11_62865397_+	intronic
CAediting_820194	chr11_62865433_+	intronic
CAediting_820195	chr11_62865442_+	intronic
CAediting_820196	chr11_62865445_+	intronic
CAediting_820197	chr11_62865455_+	intronic
CAediting_820198	chr11_62867132_+	intronic
CAediting_820199	chr11_62868021_+	intronic
CAediting_820200	chr11_62868022_+	intronic
CAediting_820201	chr11_62868930_+	intronic
CAediting_820202	chr11_62868999_+	intronic
CAediting_820203	chr11_62869003_+	intronic
CAediting_820204	chr11_62869011_+	intronic
CAediting_820205	chr11_62869026_+	intronic
CAediting_820206	chr11_62869028_+	intronic
CAediting_820207	chr11_62869040_+	intronic
CAediting_820208	chr11_62869082_+	intronic
CAediting_820209	chr11_62871597_+	exonic
CAediting_820210	chr11_62871601_+	exonic
CAediting_820211	chr11_62871627_+	exonic
CAediting_820212	chr11_62871644_+	exonic
CAediting_820213	chr11_62872368_+	intronic
CAediting_820214	chr11_62872376_+	intronic
CAediting_820215	chr11_62872408_+	intronic
CAediting_820216	chr11_62872434_+	intronic
CAediting_820217	chr11_62875025_+	intronic
CAediting_820218	chr11_62876789_+	exonic
CAediting_820219	chr11_62876799_+	exonic
CAediting_820220	chr11_62876811_+	exonic
CAediting_820221	chr11_62876817_+	exonic
CAediting_820222	chr11_62876846_+	exonic
CAediting_820223	chr11_62877270_+	intronic
CAediting_820224	chr11_62877333_+	intronic
CAediting_820225	chr11_62878338_+	intronic
CAediting_820226	chr11_62879327_+	intronic
CAediting_820227	chr11_62882535_+	ncRNA_exonic
CAediting_820228	chr11_62882554_+	ncRNA_exonic
CAediting_820229	chr11_62882559_+	ncRNA_exonic
CAediting_820230	chr11_62882577_+	ncRNA_exonic
CAediting_820231	chr11_62882589_+	ncRNA_exonic
CAediting_820232	chr11_62882614_+	ncRNA_exonic
CAediting_820233	chr11_62882624_+	ncRNA_intronic
CAediting_820234	chr11_62882642_+	ncRNA_intronic
CAediting_820235	chr11_62882690_+	ncRNA_intronic
CAediting_820236	chr11_62886016_+	ncRNA_intronic
CAediting_820237	chr11_62886034_+	ncRNA_intronic
CAediting_820238	chr11_62886035_+	ncRNA_intronic
CAediting_820239	chr11_62886040_+	ncRNA_intronic
CAediting_820240	chr11_62886070_+	ncRNA_intronic
CAediting_820241	chr11_62886089_+	ncRNA_intronic
CAediting_820242	chr11_62886090_+	ncRNA_intronic
CAediting_820243	chr11_62886099_+	ncRNA_intronic
CAediting_820244	chr11_62886106_+	ncRNA_intronic
CAediting_820245	chr11_62886114_+	ncRNA_intronic
CAediting_820246	chr11_62886118_+	ncRNA_intronic
CAediting_820247	chr11_62886128_+	ncRNA_intronic
CAediting_820248	chr11_62886130_+	ncRNA_intronic
CAediting_820249	chr11_62886131_+	ncRNA_intronic
CAediting_820250	chr11_62886138_+	ncRNA_intronic
CAediting_820251	chr11_62886139_+	ncRNA_intronic
CAediting_820252	chr11_62886140_+	ncRNA_intronic
CAediting_820253	chr11_62886143_+	ncRNA_intronic
CAediting_820254	chr11_62886169_+	ncRNA_intronic
CAediting_820255	chr11_62886175_+	ncRNA_intronic
CAediting_820256	chr11_62886179_+	ncRNA_intronic
CAediting_820257	chr11_62886192_+	ncRNA_intronic
CAediting_820258	chr11_62886196_+	ncRNA_intronic
CAediting_820259	chr11_62886197_+	ncRNA_intronic
CAediting_820260	chr11_62886201_+	ncRNA_intronic
CAediting_820261	chr11_62886210_+	ncRNA_intronic
CAediting_820262	chr11_62886211_+	ncRNA_intronic
CAediting_820263	chr11_62886221_+	ncRNA_intronic
CAediting_820264	chr11_62886230_+	ncRNA_intronic
CAediting_820265	chr11_62886234_+	ncRNA_intronic
CAediting_820266	chr11_62886235_+	ncRNA_intronic
CAediting_820267	chr11_62886254_+	ncRNA_intronic
CAediting_820268	chr11_62886259_+	ncRNA_intronic
CAediting_820269	chr11_62886271_+	ncRNA_intronic
CAediting_820270	chr11_62886303_+	ncRNA_intronic
CAediting_820271	chr11_62886307_+	ncRNA_intronic
CAediting_820272	chr11_62886471_+	ncRNA_exonic
CAediting_820273	chr11_62886477_+	ncRNA_exonic
CAediting_820274	chr11_62886495_+	ncRNA_exonic
CAediting_820275	chr11_62886509_+	ncRNA_exonic
CAediting_820276	chr11_62886523_+	ncRNA_exonic
CAediting_820277	chr11_62886528_+	ncRNA_exonic
CAediting_820278	chr11_62886533_+	ncRNA_exonic
CAediting_820279	chr11_62886545_+	ncRNA_exonic
CAediting_820280	chr11_62886561_+	ncRNA_exonic
CAediting_820281	chr11_62886567_+	ncRNA_exonic
CAediting_820282	chr11_62886657_+	ncRNA_intronic
CAediting_820283	chr11_62886664_+	ncRNA_intronic
CAediting_820284	chr11_62886689_+	ncRNA_intronic
CAediting_820285	chr11_62886690_+	ncRNA_intronic
CAediting_820286	chr11_62886696_+	ncRNA_intronic
CAediting_820287	chr11_62886716_+	ncRNA_intronic
CAediting_820288	chr11_62886719_+	ncRNA_intronic
CAediting_820289	chr11_62886729_+	ncRNA_intronic
CAediting_820290	chr11_62886731_+	ncRNA_intronic
CAediting_820291	chr11_62886787_+	ncRNA_intronic
CAediting_820292	chr11_62886808_+	ncRNA_intronic
CAediting_820293	chr11_62886861_+	ncRNA_intronic
CAediting_820294	chr11_62886873_+	ncRNA_intronic
CAediting_820295	chr11_62886958_+	ncRNA_intronic
CAediting_820296	chr11_62886973_+	ncRNA_intronic
CAediting_820297	chr11_62886974_+	ncRNA_intronic
CAediting_820298	chr11_62886999_+	ncRNA_intronic
CAediting_820299	chr11_62887000_+	ncRNA_intronic
CAediting_820300	chr11_62887012_+	ncRNA_intronic
CAediting_820301	chr11_62887447_+	ncRNA_intronic
CAediting_820302	chr11_62887448_+	ncRNA_intronic
CAediting_820303	chr11_62887453_+	ncRNA_intronic
CAediting_820304	chr11_62887470_+	ncRNA_intronic
CAediting_820305	chr11_62887493_+	ncRNA_intronic
CAediting_820306	chr11_62887494_+	ncRNA_intronic
CAediting_820307	chr11_62887507_+	ncRNA_intronic
CAediting_820308	chr11_62887512_+	ncRNA_intronic
CAediting_820309	chr11_62887517_+	ncRNA_intronic
CAediting_820310	chr11_62887526_+	ncRNA_intronic
CAediting_820311	chr11_62887542_+	ncRNA_intronic
CAediting_820312	chr11_62887547_+	ncRNA_intronic
CAediting_820313	chr11_62887553_+	ncRNA_intronic
CAediting_820314	chr11_62887554_+	ncRNA_intronic
CAediting_820315	chr11_62887555_+	ncRNA_intronic
CAediting_820316	chr11_62887558_+	ncRNA_intronic
CAediting_820317	chr11_62887588_+	ncRNA_intronic
CAediting_820318	chr11_62887592_+	ncRNA_intronic
CAediting_820319	chr11_62887605_+	ncRNA_intronic
CAediting_820320	chr11_62887609_+	ncRNA_intronic
CAediting_820321	chr11_62887615_+	ncRNA_intronic
CAediting_820322	chr11_62887623_+	ncRNA_intronic
CAediting_820323	chr11_62887624_+	ncRNA_intronic
CAediting_820324	chr11_62887628_+	ncRNA_intronic
CAediting_820325	chr11_62887635_+	ncRNA_intronic
CAediting_820326	chr11_62887639_+	ncRNA_intronic
CAediting_820327	chr11_62887644_+	ncRNA_intronic
CAediting_820328	chr11_62887647_+	ncRNA_intronic
CAediting_820329	chr11_62887648_+	ncRNA_intronic
CAediting_820330	chr11_62887653_+	ncRNA_intronic
CAediting_820331	chr11_62887668_+	ncRNA_intronic
CAediting_820332	chr11_62887684_+	ncRNA_intronic
CAediting_820333	chr11_62887797_+	ncRNA_intronic
CAediting_820334	chr11_62887812_+	ncRNA_intronic
CAediting_820335	chr11_62887816_+	ncRNA_intronic
CAediting_820336	chr11_62887824_+	ncRNA_intronic
CAediting_820337	chr11_62887846_+	ncRNA_intronic
CAediting_820338	chr11_62887856_+	ncRNA_intronic
CAediting_820339	chr11_62887860_+	ncRNA_intronic
CAediting_820340	chr11_62887867_+	ncRNA_intronic
CAediting_820341	chr11_62887873_+	ncRNA_exonic
CAediting_820342	chr11_62887892_+	ncRNA_exonic
CAediting_820343	chr11_62887910_+	ncRNA_exonic
CAediting_820344	chr11_62887919_+	ncRNA_exonic
CAediting_820345	chr11_62887929_+	ncRNA_exonic
CAediting_820346	chr11_62887932_+	ncRNA_exonic
CAediting_820347	chr11_62887934_+	ncRNA_exonic
CAediting_820348	chr11_62887954_+	ncRNA_exonic
CAediting_820349	chr11_62887958_+	ncRNA_exonic
CAediting_820350	chr11_62887959_+	ncRNA_exonic
CAediting_820351	chr11_62887976_+	ncRNA_exonic
CAediting_820352	chr11_62887979_+	ncRNA_exonic
CAediting_820353	chr11_62887986_+	ncRNA_exonic
CAediting_820354	chr11_62888005_+	ncRNA_exonic
CAediting_820355	chr11_62888016_+	ncRNA_exonic
CAediting_820356	chr11_62888017_+	ncRNA_exonic
CAediting_820357	chr11_62888030_+	ncRNA_exonic
CAediting_820358	chr11_62888031_+	ncRNA_exonic
CAediting_820359	chr11_62888034_+	ncRNA_exonic
CAediting_820360	chr11_62888035_+	ncRNA_exonic
CAediting_820361	chr11_62888057_+	ncRNA_exonic
CAediting_820362	chr11_62888071_+	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_820143	chr11_62857239_+	SINE	Alu	AluSx1
CAediting_820144	chr11_62857446_+	SINE	Alu	AluJb
CAediting_820145	chr11_62857447_+	SINE	Alu	AluJb
CAediting_820146	chr11_62857471_+	SINE	Alu	AluJb
CAediting_820147	chr11_62857489_+	SINE	Alu	AluJb
CAediting_820148	chr11_62857498_+	SINE	Alu	AluJb
CAediting_820149	chr11_62857533_+	SINE	Alu	AluJb
CAediting_820150	chr11_62857539_+	SINE	Alu	AluJb
CAediting_820151	chr11_62857543_+	SINE	Alu	AluJb
CAediting_820152	chr11_62857569_+	SINE	Alu	AluJb
CAediting_820153	chr11_62857591_+	SINE	Alu	AluJb
CAediting_820154	chr11_62857592_+	SINE	Alu	AluJb
CAediting_820155	chr11_62857610_+	SINE	Alu	AluJb
CAediting_820156	chr11_62857646_+	SINE	Alu	AluJb
CAediting_820157	chr11_62859572_+	SINE	Alu	AluSq2
CAediting_820158	chr11_62859573_+	SINE	Alu	AluSq2
CAediting_820159	chr11_62860384_+	SINE	Alu	AluY
CAediting_820160	chr11_62861269_+	SINE	Alu	AluJr
CAediting_820161	chr11_62861356_+	SINE	Alu	AluJo
CAediting_820162	chr11_62861726_+	SINE	Alu	AluSp
CAediting_820163	chr11_62861730_+	SINE	Alu	AluSp
CAediting_820164	chr11_62861732_+	SINE	Alu	AluSp
CAediting_820165	chr11_62861745_+	SINE	Alu	AluSp
CAediting_820166	chr11_62861763_+	SINE	Alu	AluSp
CAediting_820167	chr11_62861794_+	SINE	Alu	AluSp
CAediting_820168	chr11_62861795_+	SINE	Alu	AluSp
CAediting_820169	chr11_62861804_+	SINE	Alu	AluSp
CAediting_820170	chr11_62861808_+	SINE	Alu	AluSp
CAediting_820171	chr11_62862115_+	SINE	Alu	AluSx
CAediting_820172	chr11_62862131_+	SINE	Alu	AluSx
CAediting_820173	chr11_62862140_+	SINE	Alu	AluSx
CAediting_820174	chr11_62862152_+	SINE	Alu	AluSx
CAediting_820175	chr11_62862156_+	SINE	Alu	AluSx
CAediting_820176	chr11_62862197_+	SINE	Alu	AluSx
CAediting_820177	chr11_62862219_+	SINE	Alu	AluSx
CAediting_820178	chr11_62862226_+	SINE	Alu	AluSx
CAediting_820179	chr11_62862388_+	SINE	Alu	AluJr
CAediting_820180	chr11_62862435_+	SINE	Alu	AluJr
CAediting_820181	chr11_62862440_+	SINE	Alu	AluJr
CAediting_820182	chr11_62862442_+	SINE	Alu	AluJr
CAediting_820183	chr11_62862463_+	SINE	Alu	AluJr
CAediting_820185	chr11_62863082_+	SINE	Alu	AluSz
CAediting_820186	chr11_62863093_+	SINE	Alu	AluSz
CAediting_820187	chr11_62863101_+	SINE	Alu	AluSz
CAediting_820188	chr11_62863135_+	SINE	Alu	AluSz
CAediting_820189	chr11_62863173_+	SINE	Alu	AluSz
CAediting_820190	chr11_62863183_+	SINE	Alu	AluSz
CAediting_820191	chr11_62864869_+	SINE	Alu	AluSx3
CAediting_820192	chr11_62865391_+	SINE	Alu	AluSz
CAediting_820193	chr11_62865397_+	SINE	Alu	AluSz
CAediting_820194	chr11_62865433_+	SINE	Alu	AluSz
CAediting_820195	chr11_62865442_+	SINE	Alu	AluSz
CAediting_820196	chr11_62865445_+	SINE	Alu	AluSz
CAediting_820197	chr11_62865455_+	SINE	Alu	AluSz
CAediting_820198	chr11_62867132_+	SINE	Alu	AluSp
CAediting_820199	chr11_62868021_+	SINE	Alu	AluSq2
CAediting_820200	chr11_62868022_+	SINE	Alu	AluSq2
CAediting_820201	chr11_62868930_+	SINE	Alu	AluSz
CAediting_820202	chr11_62868999_+	SINE	Alu	AluSz
CAediting_820203	chr11_62869003_+	SINE	Alu	AluSz
CAediting_820204	chr11_62869011_+	SINE	Alu	AluSz
CAediting_820205	chr11_62869026_+	SINE	Alu	AluSz
CAediting_820206	chr11_62869028_+	SINE	Alu	AluSz
CAediting_820207	chr11_62869040_+	SINE	Alu	AluSz
CAediting_820208	chr11_62869082_+	SINE	Alu	AluSz
CAediting_820209	chr11_62871597_+	SINE	Alu	AluJr
CAediting_820210	chr11_62871601_+	SINE	Alu	AluJr
CAediting_820211	chr11_62871627_+	SINE	Alu	AluJr
CAediting_820212	chr11_62871644_+	SINE	Alu	AluJr
CAediting_820213	chr11_62872368_+	SINE	Alu	AluJb
CAediting_820214	chr11_62872376_+	SINE	Alu	AluJb
CAediting_820215	chr11_62872408_+	SINE	Alu	AluJb
CAediting_820216	chr11_62872434_+	SINE	Alu	AluJb
CAediting_820217	chr11_62875025_+	SINE	Alu	AluSx1
CAediting_820218	chr11_62876789_+	SINE	Alu	AluSq2
CAediting_820219	chr11_62876799_+	SINE	Alu	AluSq2
CAediting_820220	chr11_62876811_+	SINE	Alu	AluSq2
CAediting_820221	chr11_62876817_+	SINE	Alu	AluSq2
CAediting_820222	chr11_62876846_+	SINE	Alu	AluSq2
CAediting_820223	chr11_62877270_+	SINE	Alu	AluSx1
CAediting_820224	chr11_62877333_+	SINE	Alu	AluSx1
CAediting_820225	chr11_62878338_+	SINE	Alu	AluJo
CAediting_820226	chr11_62879327_+	SINE	Alu	AluSz6
CAediting_820227	chr11_62882535_+	SINE	Alu	AluSx3
CAediting_820228	chr11_62882554_+	SINE	Alu	AluSx3
CAediting_820229	chr11_62882559_+	SINE	Alu	AluSx3
CAediting_820230	chr11_62882577_+	SINE	Alu	AluSx3
CAediting_820231	chr11_62882589_+	SINE	Alu	AluSx3
CAediting_820232	chr11_62882614_+	SINE	Alu	AluSx3
CAediting_820233	chr11_62882624_+	SINE	Alu	AluSx3
CAediting_820234	chr11_62882642_+	SINE	Alu	AluSx3
CAediting_820235	chr11_62882690_+	SINE	Alu	AluSx3
CAediting_820236	chr11_62886016_+	SINE	Alu	AluSz
CAediting_820237	chr11_62886034_+	SINE	Alu	AluSz
CAediting_820238	chr11_62886035_+	SINE	Alu	AluSz
CAediting_820239	chr11_62886040_+	SINE	Alu	AluSz
CAediting_820240	chr11_62886070_+	SINE	Alu	AluSz
CAediting_820241	chr11_62886089_+	SINE	Alu	AluSz
CAediting_820242	chr11_62886090_+	SINE	Alu	AluSz
CAediting_820243	chr11_62886099_+	SINE	Alu	AluSz
CAediting_820244	chr11_62886106_+	SINE	Alu	AluSz
CAediting_820245	chr11_62886114_+	SINE	Alu	AluSz
CAediting_820246	chr11_62886118_+	SINE	Alu	AluSz
CAediting_820247	chr11_62886128_+	SINE	Alu	AluSz
CAediting_820248	chr11_62886130_+	SINE	Alu	AluSz
CAediting_820249	chr11_62886131_+	SINE	Alu	AluSz
CAediting_820250	chr11_62886138_+	SINE	Alu	AluSz
CAediting_820251	chr11_62886139_+	SINE	Alu	AluSz
CAediting_820252	chr11_62886140_+	SINE	Alu	AluSz
CAediting_820253	chr11_62886143_+	SINE	Alu	AluSz
CAediting_820254	chr11_62886169_+	SINE	Alu	AluSz
CAediting_820255	chr11_62886175_+	SINE	Alu	AluSz
CAediting_820256	chr11_62886179_+	SINE	Alu	AluSz
CAediting_820257	chr11_62886192_+	SINE	Alu	AluSz
CAediting_820258	chr11_62886196_+	SINE	Alu	AluSz
CAediting_820259	chr11_62886197_+	SINE	Alu	AluSz
CAediting_820260	chr11_62886201_+	SINE	Alu	AluSz
CAediting_820261	chr11_62886210_+	SINE	Alu	AluSz
CAediting_820262	chr11_62886211_+	SINE	Alu	AluSz
CAediting_820263	chr11_62886221_+	SINE	Alu	AluSz
CAediting_820264	chr11_62886230_+	SINE	Alu	AluSz
CAediting_820265	chr11_62886234_+	SINE	Alu	AluSz
CAediting_820266	chr11_62886235_+	SINE	Alu	AluSz
CAediting_820267	chr11_62886254_+	SINE	Alu	AluSz
CAediting_820268	chr11_62886259_+	SINE	Alu	AluSz
CAediting_820269	chr11_62886271_+	SINE	Alu	AluSz
CAediting_820270	chr11_62886303_+	SINE	Alu	AluSz
CAediting_820271	chr11_62886307_+	SINE	Alu	AluSz
CAediting_820272	chr11_62886471_+	SINE	Alu	AluJb
CAediting_820273	chr11_62886477_+	SINE	Alu	AluJb
CAediting_820274	chr11_62886495_+	SINE	Alu	AluJb
CAediting_820275	chr11_62886509_+	SINE	Alu	AluJb
CAediting_820276	chr11_62886523_+	SINE	Alu	AluJb
CAediting_820277	chr11_62886528_+	SINE	Alu	AluJb
CAediting_820278	chr11_62886533_+	SINE	Alu	AluJb
CAediting_820279	chr11_62886545_+	SINE	Alu	AluJb
CAediting_820280	chr11_62886561_+	SINE	Alu	AluJb
CAediting_820281	chr11_62886567_+	SINE	Alu	AluJb
CAediting_820282	chr11_62886657_+	SINE	Alu	AluJb
CAediting_820283	chr11_62886664_+	SINE	Alu	AluJb
CAediting_820284	chr11_62886689_+	SINE	Alu	AluJb
CAediting_820285	chr11_62886690_+	SINE	Alu	AluJb
CAediting_820286	chr11_62886696_+	SINE	Alu	AluJb
CAediting_820287	chr11_62886716_+	SINE	Alu	AluJb
CAediting_820288	chr11_62886719_+	SINE	Alu	AluJb
CAediting_820289	chr11_62886729_+	SINE	Alu	AluJb
CAediting_820290	chr11_62886731_+	SINE	Alu	AluJb
CAediting_820291	chr11_62886787_+	SINE	Alu	AluJb
CAediting_820292	chr11_62886808_+	SINE	Alu	AluJb
CAediting_820293	chr11_62886861_+	SINE	Alu	AluJb
CAediting_820294	chr11_62886873_+	SINE	Alu	AluJb
CAediting_820295	chr11_62886958_+	SINE	Alu	AluJb
CAediting_820296	chr11_62886973_+	SINE	Alu	AluJb
CAediting_820297	chr11_62886974_+	SINE	Alu	AluJb
CAediting_820298	chr11_62886999_+	SINE	Alu	AluJb
CAediting_820299	chr11_62887000_+	SINE	Alu	AluJb
CAediting_820300	chr11_62887012_+	SINE	Alu	AluJb
CAediting_820301	chr11_62887447_+	SINE	Alu	AluSx
CAediting_820302	chr11_62887448_+	SINE	Alu	AluSx
CAediting_820303	chr11_62887453_+	SINE	Alu	AluSx
CAediting_820304	chr11_62887470_+	SINE	Alu	AluSx
CAediting_820305	chr11_62887493_+	SINE	Alu	AluSx
CAediting_820306	chr11_62887494_+	SINE	Alu	AluSx
CAediting_820307	chr11_62887507_+	SINE	Alu	AluSx
CAediting_820308	chr11_62887512_+	SINE	Alu	AluSx
CAediting_820309	chr11_62887517_+	SINE	Alu	AluSx
CAediting_820310	chr11_62887526_+	SINE	Alu	AluSx
CAediting_820311	chr11_62887542_+	SINE	Alu	AluSx
CAediting_820312	chr11_62887547_+	SINE	Alu	AluSx
CAediting_820313	chr11_62887553_+	SINE	Alu	AluSx
CAediting_820314	chr11_62887554_+	SINE	Alu	AluSx
CAediting_820315	chr11_62887555_+	SINE	Alu	AluSx
CAediting_820316	chr11_62887558_+	SINE	Alu	AluSx
CAediting_820317	chr11_62887588_+	SINE	Alu	AluSx
CAediting_820318	chr11_62887592_+	SINE	Alu	AluSx
CAediting_820319	chr11_62887605_+	SINE	Alu	AluSx
CAediting_820320	chr11_62887609_+	SINE	Alu	AluSx
CAediting_820321	chr11_62887615_+	SINE	Alu	AluSx
CAediting_820322	chr11_62887623_+	SINE	Alu	AluSx
CAediting_820323	chr11_62887624_+	SINE	Alu	AluSx
CAediting_820324	chr11_62887628_+	SINE	Alu	AluSx
CAediting_820325	chr11_62887635_+	SINE	Alu	AluSx
CAediting_820326	chr11_62887639_+	SINE	Alu	AluSx
CAediting_820327	chr11_62887644_+	SINE	Alu	AluSx
CAediting_820328	chr11_62887647_+	SINE	Alu	AluSx
CAediting_820329	chr11_62887648_+	SINE	Alu	AluSx
CAediting_820330	chr11_62887653_+	SINE	Alu	AluSx
CAediting_820331	chr11_62887668_+	SINE	Alu	AluSx
CAediting_820332	chr11_62887684_+	SINE	Alu	AluSx
CAediting_820334	chr11_62887812_+	SINE	Alu	AluJr
CAediting_820335	chr11_62887816_+	SINE	Alu	AluJr
CAediting_820336	chr11_62887824_+	SINE	Alu	AluJr
CAediting_820337	chr11_62887846_+	SINE	Alu	AluJr
CAediting_820338	chr11_62887856_+	SINE	Alu	AluJr
CAediting_820339	chr11_62887860_+	SINE	Alu	AluJr
CAediting_820340	chr11_62887867_+	SINE	Alu	AluJr
CAediting_820341	chr11_62887873_+	SINE	Alu	AluJr
CAediting_820342	chr11_62887892_+	SINE	Alu	AluJr
CAediting_820343	chr11_62887910_+	SINE	Alu	AluJr
CAediting_820344	chr11_62887919_+	SINE	Alu	AluJr
CAediting_820345	chr11_62887929_+	SINE	Alu	AluJr
CAediting_820346	chr11_62887932_+	SINE	Alu	AluJr
CAediting_820347	chr11_62887934_+	SINE	Alu	AluJr
CAediting_820348	chr11_62887954_+	SINE	Alu	AluJr
CAediting_820349	chr11_62887958_+	SINE	Alu	AluJr
CAediting_820350	chr11_62887959_+	SINE	Alu	AluJr
CAediting_820351	chr11_62887976_+	SINE	Alu	AluJr
CAediting_820352	chr11_62887979_+	SINE	Alu	AluJr
CAediting_820353	chr11_62887986_+	SINE	Alu	AluJr
CAediting_820354	chr11_62888005_+	SINE	Alu	AluJr
CAediting_820355	chr11_62888016_+	SINE	Alu	AluJr
CAediting_820356	chr11_62888017_+	SINE	Alu	AluJr
CAediting_820357	chr11_62888030_+	SINE	Alu	AluJr
CAediting_820358	chr11_62888031_+	SINE	Alu	AluJr
CAediting_820359	chr11_62888034_+	SINE	Alu	AluJr
CAediting_820360	chr11_62888035_+	SINE	Alu	AluJr
CAediting_820361	chr11_62888057_+	SINE	Alu	AluJr
CAediting_820362	chr11_62888071_+	SINE	Alu	AluJr

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RNA A-to-I editing events in the alternative splicing sites for SLC3A2

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_820229	chr11_62882559_+	62882558:62882580	3SS	0+19i	TACTGCAGCCTCCTCCCCCAGGG	-13.54	TGCTGCAGCCTCCTCCCCCAGGG	-12.58
IR	CAediting_820229	chr11_62882559_+	62882558:62882580	3SS	0+19i	TACTGCAGCCTCCTCCCCCAGGG	-13.54	TGCTGCAGCCTCCTCCCCCAGGG	-12.58
MEX_1	CAediting_820229	chr11_62882559_+	62882558:62882580	3SS	0+19i	TACTGCAGCCTCCTCCCCCAGGG	-13.54	TGCTGCAGCCTCCTCCCCCAGGG	-12.58
ES	CAediting_820230	chr11_62882577_+	62882558:62882580	3SS	0+1i	TACTGCAGCCTCCTCCCCCAGGG	-13.54	TACTGCAGCCTCCTCCCCCGGGG	-4.79
IR	CAediting_820230	chr11_62882577_+	62882558:62882580	3SS	0+1i	TACTGCAGCCTCCTCCCCCAGGG	-13.54	TACTGCAGCCTCCTCCCCCGGGG	-4.79
MEX_1	CAediting_820230	chr11_62882577_+	62882558:62882580	3SS	0+1i	TACTGCAGCCTCCTCCCCCAGGG	-13.54	TACTGCAGCCTCCTCCCCCGGGG	-4.79
ES	CAediting_820233	chr11_62882624_+	62882616:62882624	5SS	0+6i	CTGGTACTA	3.1	CTGGTACTG	4.41
MEX_1	CAediting_820233	chr11_62882624_+	62882616:62882624	5SS	0+6i	CTGGTACTA	3.1	CTGGTACTG	4.41
ES	CAediting_820281	chr11_62886567_+	62886566:62886574	5SS	2+0i	TAGGTGCGT	6.6	TGGGTGCGT	5.46

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000168003.15.SLC3A2.

Correlation between RNA A-to-I editing and PSI for ENSG00000168003.15.SLC3A2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SLC3A2

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

OV.CAediting_820347.ENSG00000168003.SLC3A2.png
Soverview

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Protein coding region RNA A-to-I editings for SLC3A2

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SLC3A2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SLC3A2

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for SLC3A2

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
GBM	CAediting_820347	chr11_62887934_+	.	.	.	.	0.0159142329128113	0.326666439809712

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Relation with cancer stages for SLC3A2

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
LUSC	pathologic_stage	CAediting_820358	chr11_62888031_+	0.0399936971888041	0.280415331288126

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Relation with survival for SLC3A2

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for SLC3A2

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SLC3A2

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
SLC3A2	C0024121	Lung Neoplasms	1	CTD_human
SLC3A2	C0242379	Malignant neoplasm of lung	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene