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Editing gene: SKI (CAeditome ID:6497)

Gene summary for SKI

Gene summary

Gene information	Gene symbol	SKI
	Gene ID	6497
	Gene name	SKI proto-oncogene
	Synonyms	SGS\|SKV
	Cytomap	1p36.33-p36.32
	Type of gene	protein-coding
	Description	ski oncogeneproto-oncogene c-Skiski oncoproteinv-ski avian sarcoma viral oncogene homolog
	Modification date	20210518
	UniProtAcc	P12755
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
SKI	GO:0001227	Ski oncogene	17469184
SKI	GO:0008270	Ski oncogene	12419246
SKI	GO:0000122	Ski oncogene	17469184
SKI	GO:0008285	Ski oncogene	11430826
SKI	GO:0014902	Ski oncogene	19008232
SKI	GO:0030512	Ski oncogene	17469184
SKI	GO:0030514	Ski oncogene	14699069
SKI	GO:0032926	Ski oncogene	14699069
SKI	GO:0043388	Ski oncogene	15107821
SKI	GO:0045668	Ski oncogene	14699069
SKI	GO:0060395	Ski oncogene	12874272
SKI	GO:0005634	Ski oncogene	17054724
SKI	GO:0005634	Ski oncogene	17510063
SKI	GO:0005654	Ski oncogene	0000052
SKI	GO:0005813	Ski oncogene	21600873
SKI	GO:0016604	Ski oncogene	0000052
SKI	GO:0016604	Ski oncogene	12874272
SKI	GO:0016605	Ski oncogene	11430826
SKI	GO:0032991	Ski oncogene	23610558

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RNA A-to-I events for SKI

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000157933.9

RNA A-to-I editing events in Cancer.

CAediting_3287(2229089, +), CAediting_3288(2235160, +), CAediting_3289(2235171, +), CAediting_3290(2241473, +), CAediting_3291(2241600, +), CAediting_3292(2241667, +), CAediting_3293(2242544, +), CAediting_3294(2242589, +), CAediting_3295(2242619, +), CAediting_3296(2242620, +), CAediting_3297(2242622, +), CAediting_3298(2242649, +), CAediting_3299(2242725, +), CAediting_3300(2244016, +), CAediting_3301(2244046, +), CAediting_3302(2244070, +), CAediting_3303(2244095, +), CAediting_3304(2244105, +), CAediting_3305(2244107, +), CAediting_3306(2244121, +), CAediting_3307(2244123, +), CAediting_3308(2244152, +), CAediting_3309(2244224, +), CAediting_3310(2244225, +), CAediting_3311(2244226, +), CAediting_3312(2244238, +), CAediting_3313(2244316, +), CAediting_3314(2244322, +), CAediting_3315(2244323, +), CAediting_3316(2244344, +), CAediting_3317(2244345, +), CAediting_3318(2244368, +), CAediting_3319(2244377, +), CAediting_3320(2244391, +), CAediting_3321(2244392, +), CAediting_3322(2244416, +), CAediting_3323(2244420, +), CAediting_3324(2244422, +), CAediting_3325(2244424, +), CAediting_3326(2244430, +), CAediting_3327(2244459, +), CAediting_3328(2244469, +), CAediting_3329(2244476, +), CAediting_3330(2244492, +), CAediting_3331(2244494, +), CAediting_3332(2244500, +), CAediting_3333(2244501, +), CAediting_3334(2244508, +), CAediting_3335(2244530, +), CAediting_3336(2244564, +), CAediting_3337(2244568, +), CAediting_3338(2246959, +), CAediting_3339(2247034, +), CAediting_3340(2247035, +), CAediting_3341(2247056, +), CAediting_3342(2247060, +), CAediting_3343(2247070, +), CAediting_3344(2247074, +), CAediting_3345(2247108, +), CAediting_3346(2247125, +), CAediting_3347(2247140, +), CAediting_3348(2250086, +), CAediting_3349(2250116, +), CAediting_3350(2250120, +), CAediting_3351(2250180, +), CAediting_3352(2252826, +), CAediting_3353(2252839, +), CAediting_3354(2252880, +), CAediting_3355(2252912, +), CAediting_3356(2252917, +), CAediting_3357(2252918, +), CAediting_3358(2252931, +), CAediting_3359(2252949, +), CAediting_3360(2252975, +), CAediting_3361(2252976, +), CAediting_3362(2253008, +), CAediting_3363(2253010, +), CAediting_3364(2253028, +), CAediting_3365(2257851, +), CAediting_3366(2262980, +), CAediting_3367(2262993, +), CAediting_3368(2263000, +), CAediting_3369(2263001, +), CAediting_3370(2263004, +), CAediting_3371(2263025, +), CAediting_3372(2263026, +), CAediting_3373(2263041, +), CAediting_3374(2263057, +), CAediting_3375(2263136, +), CAediting_3376(2263175, +), CAediting_3377(2263421, +), CAediting_3378(2263435, +), CAediting_3379(2263733, +), CAediting_3380(2263741, +), CAediting_3381(2263742, +), CAediting_3382(2263849, +), CAediting_3383(2263850, +), CAediting_3384(2263851, +), CAediting_3385(2263854, +), CAediting_3386(2263855, +), CAediting_3387(2263862, +), CAediting_3388(2263920, +), CAediting_3389(2263921, +), CAediting_3390(2263942, +), CAediting_3391(2263943, +), CAediting_3392(2263950, +), CAediting_3393(2263960, +), CAediting_3394(2263994, +), CAediting_3395(2264309, +), CAediting_3396(2264331, +), CAediting_3397(2264386, +), CAediting_3398(2264408, +), CAediting_3399(2264444, +), CAediting_3400(2264531, +), CAediting_3401(2264543, +), CAediting_3402(2264587, +), CAediting_3403(2264599, +), CAediting_3404(2264611, +), CAediting_3405(2264634, +), CAediting_3406(2264635, +), CAediting_3407(2264638, +), CAediting_3408(2264652, +), CAediting_3409(2264835, +), CAediting_3410(2264843, +), CAediting_3411(2264950, +), CAediting_3412(2265055, +), CAediting_3413(2265074, +), CAediting_3414(2265705, +), CAediting_3415(2265711, +), CAediting_3416(2265720, +), CAediting_3417(2265802, +), CAediting_3418(2265810, +), CAediting_3419(2265847, +), CAediting_3420(2265861, +), CAediting_3421(2265883, +), CAediting_3422(2265888, +), CAediting_3423(2265889, +), CAediting_3424(2268023, +), CAediting_3425(2272274, +), CAediting_3426(2275630, +), CAediting_3427(2275642, +), CAediting_3428(2277187, +), CAediting_3429(2277211, +), CAediting_3430(2277233, +), CAediting_3431(2277235, +), CAediting_3432(2277255, +), CAediting_3433(2279806, +), CAediting_3434(2280113, +), CAediting_3435(2280114, +), CAediting_3436(2280223, +), CAediting_3437(2280224, +), CAediting_3438(2280229, +), CAediting_3439(2280254, +), CAediting_3440(2280265, +), CAediting_3441(2285251, +), CAediting_3442(2285311, +), CAediting_3443(2285312, +), CAediting_3444(2285368, +), CAediting_3445(2285480, +), CAediting_3446(2285642, +), CAediting_3447(2285693, +), CAediting_3448(2285703, +), CAediting_3449(2285938, +), CAediting_3450(2285991, +), CAediting_3451(2286003, +), CAediting_3452(2286057, +), CAediting_3453(2286076, +), CAediting_3454(2286119, +), CAediting_3455(2286134, +), CAediting_3456(2286152, +), CAediting_3457(2286162, +), CAediting_3458(2286263, +), CAediting_3459(2286277, +), CAediting_3460(2286300, +), CAediting_3461(2286312, +), CAediting_3462(2286320, +), CAediting_3463(2286331, +), CAediting_3464(2286337, +), CAediting_3465(2286339, +), CAediting_3466(2286342, +), CAediting_3467(2286343, +), CAediting_3468(2286344, +), CAediting_3469(2286348, +), CAediting_3470(2286361, +), CAediting_3471(2286372, +), CAediting_3472(2286387, +), CAediting_3473(2286428, +), CAediting_3474(2286442, +), CAediting_3475(2286451, +), CAediting_3476(2286461, +), CAediting_3477(2286477, +), CAediting_3478(2288114, +), CAediting_3479(2288305, +), CAediting_3480(2288343, +), CAediting_3481(2288365, +), CAediting_3482(2288384, +), CAediting_3483(2292482, +), CAediting_3484(2296123, +), CAediting_3485(2296145, +), CAediting_3486(2296154, +), CAediting_3487(2296169, +), CAediting_3488(2296274, +), CAediting_3489(2296280, +), CAediting_3490(2296284, +), CAediting_3491(2296301, +), CAediting_3492(2297162, +), CAediting_3493(2297232, +), CAediting_3494(2297233, +), CAediting_3495(2308508, +), CAediting_3496(2309421, +),

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RNA editing positional annotations for SKI using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_3287	chr1_2229089_+	nonsynonymous SNV	ENST00000378536.4	c.A323G	p.E108G	D	D	D

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_3287	chr1_2229089_+	exonic
CAediting_3288	chr1_2235160_+	ncRNA_intronic
CAediting_3289	chr1_2235171_+	ncRNA_intronic
CAediting_3290	chr1_2241473_+	ncRNA_intronic
CAediting_3291	chr1_2241600_+	ncRNA_intronic
CAediting_3292	chr1_2241667_+	ncRNA_intronic
CAediting_3293	chr1_2242544_+	ncRNA_intronic
CAediting_3294	chr1_2242589_+	ncRNA_intronic
CAediting_3295	chr1_2242619_+	ncRNA_intronic
CAediting_3296	chr1_2242620_+	ncRNA_intronic
CAediting_3297	chr1_2242622_+	ncRNA_intronic
CAediting_3298	chr1_2242649_+	ncRNA_intronic
CAediting_3299	chr1_2242725_+	ncRNA_intronic
CAediting_3300	chr1_2244016_+	ncRNA_intronic
CAediting_3301	chr1_2244046_+	ncRNA_intronic
CAediting_3302	chr1_2244070_+	ncRNA_intronic
CAediting_3303	chr1_2244095_+	ncRNA_intronic
CAediting_3304	chr1_2244105_+	ncRNA_intronic
CAediting_3305	chr1_2244107_+	ncRNA_intronic
CAediting_3306	chr1_2244121_+	ncRNA_intronic
CAediting_3307	chr1_2244123_+	ncRNA_intronic
CAediting_3308	chr1_2244152_+	ncRNA_intronic
CAediting_3309	chr1_2244224_+	ncRNA_intronic
CAediting_3310	chr1_2244225_+	ncRNA_intronic
CAediting_3311	chr1_2244226_+	ncRNA_intronic
CAediting_3312	chr1_2244238_+	ncRNA_intronic
CAediting_3313	chr1_2244316_+	ncRNA_intronic
CAediting_3314	chr1_2244322_+	ncRNA_intronic
CAediting_3315	chr1_2244323_+	ncRNA_intronic
CAediting_3316	chr1_2244344_+	ncRNA_intronic
CAediting_3317	chr1_2244345_+	ncRNA_intronic
CAediting_3318	chr1_2244368_+	ncRNA_intronic
CAediting_3319	chr1_2244377_+	ncRNA_intronic
CAediting_3320	chr1_2244391_+	ncRNA_intronic
CAediting_3321	chr1_2244392_+	ncRNA_intronic
CAediting_3322	chr1_2244416_+	ncRNA_intronic
CAediting_3323	chr1_2244420_+	ncRNA_intronic
CAediting_3324	chr1_2244422_+	ncRNA_intronic
CAediting_3325	chr1_2244424_+	ncRNA_intronic
CAediting_3326	chr1_2244430_+	ncRNA_intronic
CAediting_3327	chr1_2244459_+	ncRNA_intronic
CAediting_3328	chr1_2244469_+	ncRNA_intronic
CAediting_3329	chr1_2244476_+	ncRNA_intronic
CAediting_3330	chr1_2244492_+	ncRNA_intronic
CAediting_3331	chr1_2244494_+	ncRNA_intronic
CAediting_3332	chr1_2244500_+	ncRNA_intronic
CAediting_3333	chr1_2244501_+	ncRNA_intronic
CAediting_3334	chr1_2244508_+	ncRNA_intronic
CAediting_3335	chr1_2244530_+	ncRNA_intronic
CAediting_3336	chr1_2244564_+	ncRNA_intronic
CAediting_3337	chr1_2244568_+	ncRNA_intronic
CAediting_3338	chr1_2246959_+	ncRNA_intronic
CAediting_3339	chr1_2247034_+	ncRNA_intronic
CAediting_3340	chr1_2247035_+	ncRNA_intronic
CAediting_3341	chr1_2247056_+	ncRNA_intronic
CAediting_3342	chr1_2247060_+	ncRNA_intronic
CAediting_3343	chr1_2247070_+	ncRNA_intronic
CAediting_3344	chr1_2247074_+	ncRNA_intronic
CAediting_3345	chr1_2247108_+	ncRNA_intronic
CAediting_3346	chr1_2247125_+	ncRNA_intronic
CAediting_3347	chr1_2247140_+	ncRNA_intronic
CAediting_3348	chr1_2250086_+	ncRNA_intronic
CAediting_3349	chr1_2250116_+	ncRNA_intronic
CAediting_3350	chr1_2250120_+	ncRNA_intronic
CAediting_3351	chr1_2250180_+	ncRNA_intronic
CAediting_3352	chr1_2252826_+	ncRNA_intronic
CAediting_3353	chr1_2252839_+	ncRNA_intronic
CAediting_3354	chr1_2252880_+	ncRNA_intronic
CAediting_3355	chr1_2252912_+	ncRNA_intronic
CAediting_3356	chr1_2252917_+	ncRNA_intronic
CAediting_3357	chr1_2252918_+	ncRNA_intronic
CAediting_3358	chr1_2252931_+	ncRNA_intronic
CAediting_3359	chr1_2252949_+	ncRNA_intronic
CAediting_3360	chr1_2252975_+	ncRNA_intronic
CAediting_3361	chr1_2252976_+	ncRNA_intronic
CAediting_3362	chr1_2253008_+	ncRNA_intronic
CAediting_3363	chr1_2253010_+	ncRNA_intronic
CAediting_3364	chr1_2253028_+	ncRNA_intronic
CAediting_3365	chr1_2257851_+	ncRNA_intronic
CAediting_3366	chr1_2262980_+	ncRNA_intronic
CAediting_3367	chr1_2262993_+	ncRNA_intronic
CAediting_3368	chr1_2263000_+	ncRNA_intronic
CAediting_3369	chr1_2263001_+	ncRNA_intronic
CAediting_3370	chr1_2263004_+	ncRNA_intronic
CAediting_3371	chr1_2263025_+	ncRNA_intronic
CAediting_3372	chr1_2263026_+	ncRNA_intronic
CAediting_3373	chr1_2263041_+	ncRNA_intronic
CAediting_3374	chr1_2263057_+	ncRNA_intronic
CAediting_3375	chr1_2263136_+	ncRNA_intronic
CAediting_3376	chr1_2263175_+	ncRNA_intronic
CAediting_3377	chr1_2263421_+	ncRNA_intronic
CAediting_3378	chr1_2263435_+	ncRNA_intronic
CAediting_3379	chr1_2263733_+	ncRNA_intronic
CAediting_3380	chr1_2263741_+	ncRNA_intronic
CAediting_3381	chr1_2263742_+	ncRNA_intronic
CAediting_3382	chr1_2263849_+	ncRNA_intronic
CAediting_3383	chr1_2263850_+	ncRNA_intronic
CAediting_3384	chr1_2263851_+	ncRNA_intronic
CAediting_3385	chr1_2263854_+	ncRNA_intronic
CAediting_3386	chr1_2263855_+	ncRNA_intronic
CAediting_3387	chr1_2263862_+	ncRNA_intronic
CAediting_3388	chr1_2263920_+	ncRNA_intronic
CAediting_3389	chr1_2263921_+	ncRNA_intronic
CAediting_3390	chr1_2263942_+	ncRNA_intronic
CAediting_3391	chr1_2263943_+	ncRNA_intronic
CAediting_3392	chr1_2263950_+	ncRNA_intronic
CAediting_3393	chr1_2263960_+	ncRNA_intronic
CAediting_3394	chr1_2263994_+	ncRNA_intronic
CAediting_3395	chr1_2264309_+	ncRNA_intronic
CAediting_3396	chr1_2264331_+	ncRNA_intronic
CAediting_3397	chr1_2264386_+	ncRNA_intronic
CAediting_3398	chr1_2264408_+	ncRNA_intronic
CAediting_3399	chr1_2264444_+	ncRNA_intronic
CAediting_3400	chr1_2264531_+	ncRNA_intronic
CAediting_3401	chr1_2264543_+	ncRNA_intronic
CAediting_3402	chr1_2264587_+	ncRNA_intronic
CAediting_3403	chr1_2264599_+	ncRNA_intronic
CAediting_3404	chr1_2264611_+	ncRNA_intronic
CAediting_3405	chr1_2264634_+	ncRNA_intronic
CAediting_3406	chr1_2264635_+	ncRNA_intronic
CAediting_3407	chr1_2264638_+	ncRNA_intronic
CAediting_3408	chr1_2264652_+	ncRNA_intronic
CAediting_3409	chr1_2264835_+	ncRNA_intronic
CAediting_3410	chr1_2264843_+	ncRNA_intronic
CAediting_3411	chr1_2264950_+	ncRNA_intronic
CAediting_3412	chr1_2265055_+	ncRNA_intronic
CAediting_3413	chr1_2265074_+	ncRNA_intronic
CAediting_3414	chr1_2265705_+	ncRNA_intronic
CAediting_3415	chr1_2265711_+	ncRNA_intronic
CAediting_3416	chr1_2265720_+	ncRNA_intronic
CAediting_3417	chr1_2265802_+	ncRNA_intronic
CAediting_3418	chr1_2265810_+	ncRNA_intronic
CAediting_3419	chr1_2265847_+	ncRNA_intronic
CAediting_3420	chr1_2265861_+	ncRNA_intronic
CAediting_3421	chr1_2265883_+	ncRNA_intronic
CAediting_3422	chr1_2265888_+	ncRNA_intronic
CAediting_3423	chr1_2265889_+	ncRNA_intronic
CAediting_3424	chr1_2268023_+	ncRNA_intronic
CAediting_3425	chr1_2272274_+	ncRNA_intronic
CAediting_3426	chr1_2275630_+	ncRNA_intronic
CAediting_3427	chr1_2275642_+	ncRNA_intronic
CAediting_3428	chr1_2277187_+	ncRNA_intronic
CAediting_3429	chr1_2277211_+	ncRNA_intronic
CAediting_3430	chr1_2277233_+	ncRNA_intronic
CAediting_3431	chr1_2277235_+	ncRNA_intronic
CAediting_3432	chr1_2277255_+	ncRNA_intronic
CAediting_3433	chr1_2279806_+	ncRNA_intronic
CAediting_3434	chr1_2280113_+	ncRNA_intronic
CAediting_3435	chr1_2280114_+	ncRNA_intronic
CAediting_3436	chr1_2280223_+	ncRNA_intronic
CAediting_3437	chr1_2280224_+	ncRNA_intronic
CAediting_3438	chr1_2280229_+	ncRNA_intronic
CAediting_3439	chr1_2280254_+	ncRNA_intronic
CAediting_3440	chr1_2280265_+	ncRNA_intronic
CAediting_3441	chr1_2285251_+	ncRNA_intronic
CAediting_3442	chr1_2285311_+	ncRNA_intronic
CAediting_3443	chr1_2285312_+	ncRNA_intronic
CAediting_3444	chr1_2285368_+	ncRNA_intronic
CAediting_3445	chr1_2285480_+	ncRNA_intronic
CAediting_3446	chr1_2285642_+	ncRNA_intronic
CAediting_3447	chr1_2285693_+	ncRNA_intronic
CAediting_3448	chr1_2285703_+	ncRNA_intronic
CAediting_3449	chr1_2285938_+	ncRNA_intronic
CAediting_3450	chr1_2285991_+	ncRNA_intronic
CAediting_3451	chr1_2286003_+	ncRNA_intronic
CAediting_3452	chr1_2286057_+	ncRNA_intronic
CAediting_3453	chr1_2286076_+	ncRNA_intronic
CAediting_3454	chr1_2286119_+	ncRNA_intronic
CAediting_3455	chr1_2286134_+	ncRNA_intronic
CAediting_3456	chr1_2286152_+	ncRNA_intronic
CAediting_3457	chr1_2286162_+	ncRNA_intronic
CAediting_3458	chr1_2286263_+	ncRNA_intronic
CAediting_3459	chr1_2286277_+	ncRNA_intronic
CAediting_3460	chr1_2286300_+	ncRNA_intronic
CAediting_3461	chr1_2286312_+	ncRNA_intronic
CAediting_3462	chr1_2286320_+	ncRNA_intronic
CAediting_3463	chr1_2286331_+	ncRNA_intronic
CAediting_3464	chr1_2286337_+	ncRNA_intronic
CAediting_3465	chr1_2286339_+	ncRNA_intronic
CAediting_3466	chr1_2286342_+	ncRNA_intronic
CAediting_3467	chr1_2286343_+	ncRNA_intronic
CAediting_3468	chr1_2286344_+	ncRNA_intronic
CAediting_3469	chr1_2286348_+	ncRNA_intronic
CAediting_3470	chr1_2286361_+	ncRNA_intronic
CAediting_3471	chr1_2286372_+	ncRNA_intronic
CAediting_3472	chr1_2286387_+	ncRNA_intronic
CAediting_3473	chr1_2286428_+	ncRNA_intronic
CAediting_3474	chr1_2286442_+	ncRNA_intronic
CAediting_3475	chr1_2286451_+	ncRNA_intronic
CAediting_3476	chr1_2286461_+	ncRNA_intronic
CAediting_3477	chr1_2286477_+	ncRNA_intronic
CAediting_3478	chr1_2288114_+	ncRNA_intronic
CAediting_3479	chr1_2288305_+	ncRNA_intronic
CAediting_3480	chr1_2288343_+	ncRNA_intronic
CAediting_3481	chr1_2288365_+	ncRNA_intronic
CAediting_3482	chr1_2288384_+	ncRNA_intronic
CAediting_3483	chr1_2292482_+	ncRNA_intronic
CAediting_3484	chr1_2296123_+	ncRNA_intronic
CAediting_3485	chr1_2296145_+	ncRNA_intronic
CAediting_3486	chr1_2296154_+	ncRNA_intronic
CAediting_3487	chr1_2296169_+	ncRNA_intronic
CAediting_3488	chr1_2296274_+	ncRNA_intronic
CAediting_3489	chr1_2296280_+	ncRNA_intronic
CAediting_3490	chr1_2296284_+	ncRNA_intronic
CAediting_3491	chr1_2296301_+	ncRNA_intronic
CAediting_3492	chr1_2297162_+	ncRNA_intronic
CAediting_3493	chr1_2297232_+	ncRNA_intronic
CAediting_3494	chr1_2297233_+	ncRNA_intronic
CAediting_3495	chr1_2308508_+	UTR3
CAediting_3496	chr1_2309421_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_3288	chr1_2235160_+	SINE	Alu	AluSz
CAediting_3289	chr1_2235171_+	SINE	Alu	AluSz
CAediting_3290	chr1_2241473_+	SINE	Alu	AluY
CAediting_3291	chr1_2241600_+	SINE	Alu	AluY
CAediting_3292	chr1_2241667_+	SINE	Alu	AluY
CAediting_3293	chr1_2242544_+	SINE	Alu	AluJo
CAediting_3294	chr1_2242589_+	SINE	Alu	AluJo
CAediting_3295	chr1_2242619_+	SINE	Alu	AluJo
CAediting_3296	chr1_2242620_+	SINE	Alu	AluJo
CAediting_3297	chr1_2242622_+	SINE	Alu	AluJo
CAediting_3298	chr1_2242649_+	SINE	Alu	AluJo
CAediting_3299	chr1_2242725_+	SINE	Alu	AluJo
CAediting_3300	chr1_2244016_+	SINE	Alu	AluY
CAediting_3301	chr1_2244046_+	SINE	Alu	AluY
CAediting_3302	chr1_2244070_+	SINE	Alu	AluY
CAediting_3303	chr1_2244095_+	SINE	Alu	AluY
CAediting_3304	chr1_2244105_+	SINE	Alu	AluY
CAediting_3305	chr1_2244107_+	SINE	Alu	AluY
CAediting_3306	chr1_2244121_+	SINE	Alu	AluY
CAediting_3307	chr1_2244123_+	SINE	Alu	AluY
CAediting_3308	chr1_2244152_+	SINE	Alu	AluY
CAediting_3309	chr1_2244224_+	SINE	Alu	AluY
CAediting_3310	chr1_2244225_+	SINE	Alu	AluY
CAediting_3311	chr1_2244226_+	SINE	Alu	AluY
CAediting_3312	chr1_2244238_+	SINE	Alu	AluY
CAediting_3313	chr1_2244316_+	SINE	Alu	AluSz
CAediting_3314	chr1_2244322_+	SINE	Alu	AluSz
CAediting_3315	chr1_2244323_+	SINE	Alu	AluSz
CAediting_3316	chr1_2244344_+	SINE	Alu	AluSz
CAediting_3317	chr1_2244345_+	SINE	Alu	AluSz
CAediting_3318	chr1_2244368_+	SINE	Alu	AluSz
CAediting_3319	chr1_2244377_+	SINE	Alu	AluSz
CAediting_3320	chr1_2244391_+	SINE	Alu	AluSz
CAediting_3321	chr1_2244392_+	SINE	Alu	AluSz
CAediting_3322	chr1_2244416_+	SINE	Alu	AluSz
CAediting_3323	chr1_2244420_+	SINE	Alu	AluSz
CAediting_3324	chr1_2244422_+	SINE	Alu	AluSz
CAediting_3325	chr1_2244424_+	SINE	Alu	AluSz
CAediting_3326	chr1_2244430_+	SINE	Alu	AluSz
CAediting_3327	chr1_2244459_+	SINE	Alu	AluSz
CAediting_3328	chr1_2244469_+	SINE	Alu	AluSz
CAediting_3329	chr1_2244476_+	SINE	Alu	AluSz
CAediting_3330	chr1_2244492_+	SINE	Alu	AluSz
CAediting_3331	chr1_2244494_+	SINE	Alu	AluSz
CAediting_3332	chr1_2244500_+	SINE	Alu	AluSz
CAediting_3333	chr1_2244501_+	SINE	Alu	AluSz
CAediting_3334	chr1_2244508_+	SINE	Alu	AluSz
CAediting_3335	chr1_2244530_+	SINE	Alu	AluSz
CAediting_3336	chr1_2244564_+	SINE	Alu	AluSz
CAediting_3337	chr1_2244568_+	SINE	Alu	AluSz
CAediting_3338	chr1_2246959_+	SINE	Alu	AluSx4
CAediting_3339	chr1_2247034_+	SINE	Alu	AluSx4
CAediting_3340	chr1_2247035_+	SINE	Alu	AluSx4
CAediting_3341	chr1_2247056_+	SINE	Alu	AluSx4
CAediting_3342	chr1_2247060_+	SINE	Alu	AluSx4
CAediting_3343	chr1_2247070_+	SINE	Alu	AluSx4
CAediting_3344	chr1_2247074_+	SINE	Alu	AluSx4
CAediting_3345	chr1_2247108_+	SINE	Alu	AluSx4
CAediting_3346	chr1_2247125_+	SINE	Alu	AluSx4
CAediting_3347	chr1_2247140_+	SINE	Alu	AluSx4
CAediting_3348	chr1_2250086_+	SINE	Alu	AluSx1
CAediting_3349	chr1_2250116_+	SINE	Alu	AluSx1
CAediting_3350	chr1_2250120_+	SINE	Alu	AluSx1
CAediting_3351	chr1_2250180_+	SINE	Alu	AluSx1
CAediting_3352	chr1_2252826_+	SINE	Alu	AluSz6
CAediting_3353	chr1_2252839_+	SINE	Alu	AluSz6
CAediting_3354	chr1_2252880_+	SINE	Alu	AluSz6
CAediting_3355	chr1_2252912_+	SINE	Alu	AluSz6
CAediting_3356	chr1_2252917_+	SINE	Alu	AluSz6
CAediting_3357	chr1_2252918_+	SINE	Alu	AluSz6
CAediting_3358	chr1_2252931_+	SINE	Alu	AluSz6
CAediting_3359	chr1_2252949_+	SINE	Alu	AluSz6
CAediting_3360	chr1_2252975_+	SINE	Alu	AluSz6
CAediting_3361	chr1_2252976_+	SINE	Alu	AluSz6
CAediting_3362	chr1_2253008_+	SINE	Alu	AluSz6
CAediting_3363	chr1_2253010_+	SINE	Alu	AluSz6
CAediting_3364	chr1_2253028_+	SINE	Alu	AluSz6
CAediting_3365	chr1_2257851_+	SINE	Alu	AluSp
CAediting_3366	chr1_2262980_+	SINE	Alu	AluSx1
CAediting_3367	chr1_2262993_+	SINE	Alu	AluSx1
CAediting_3368	chr1_2263000_+	SINE	Alu	AluSx1
CAediting_3369	chr1_2263001_+	SINE	Alu	AluSx1
CAediting_3370	chr1_2263004_+	SINE	Alu	AluSx1
CAediting_3371	chr1_2263025_+	SINE	Alu	AluSx1
CAediting_3372	chr1_2263026_+	SINE	Alu	AluSx1
CAediting_3373	chr1_2263041_+	SINE	Alu	AluSx1
CAediting_3374	chr1_2263057_+	SINE	Alu	AluSx1
CAediting_3375	chr1_2263136_+	SINE	Alu	AluSx1
CAediting_3376	chr1_2263175_+	SINE	Alu	AluSx1
CAediting_3377	chr1_2263421_+	SINE	Alu	AluSx
CAediting_3378	chr1_2263435_+	SINE	Alu	AluSx
CAediting_3379	chr1_2263733_+	SINE	Alu	AluSx
CAediting_3380	chr1_2263741_+	SINE	Alu	AluSx
CAediting_3381	chr1_2263742_+	SINE	Alu	AluSx
CAediting_3382	chr1_2263849_+	SINE	Alu	AluSx
CAediting_3383	chr1_2263850_+	SINE	Alu	AluSx
CAediting_3384	chr1_2263851_+	SINE	Alu	AluSx
CAediting_3385	chr1_2263854_+	SINE	Alu	AluSx
CAediting_3386	chr1_2263855_+	SINE	Alu	AluSx
CAediting_3387	chr1_2263862_+	SINE	Alu	AluSx
CAediting_3388	chr1_2263920_+	SINE	Alu	FLAM_C
CAediting_3389	chr1_2263921_+	SINE	Alu	FLAM_C
CAediting_3390	chr1_2263942_+	SINE	Alu	FLAM_C
CAediting_3391	chr1_2263943_+	SINE	Alu	FLAM_C
CAediting_3392	chr1_2263950_+	SINE	Alu	FLAM_C
CAediting_3393	chr1_2263960_+	SINE	Alu	FLAM_C
CAediting_3394	chr1_2263994_+	SINE	Alu	FLAM_C
CAediting_3395	chr1_2264309_+	SINE	Alu	AluSx3
CAediting_3396	chr1_2264331_+	SINE	Alu	AluSx3
CAediting_3397	chr1_2264386_+	SINE	Alu	AluSx3
CAediting_3398	chr1_2264408_+	SINE	Alu	AluSx3
CAediting_3399	chr1_2264444_+	SINE	Alu	AluSx3
CAediting_3400	chr1_2264531_+	SINE	Alu	AluSx3
CAediting_3401	chr1_2264543_+	SINE	Alu	AluSx3
CAediting_3402	chr1_2264587_+	SINE	Alu	AluJb
CAediting_3403	chr1_2264599_+	SINE	Alu	AluJb
CAediting_3404	chr1_2264611_+	SINE	Alu	AluJb
CAediting_3405	chr1_2264634_+	SINE	Alu	AluJb
CAediting_3406	chr1_2264635_+	SINE	Alu	AluJb
CAediting_3407	chr1_2264638_+	SINE	Alu	AluJb
CAediting_3408	chr1_2264652_+	SINE	Alu	AluJb
CAediting_3409	chr1_2264835_+	SINE	Alu	AluSx1
CAediting_3410	chr1_2264843_+	SINE	Alu	AluSx1
CAediting_3411	chr1_2264950_+	SINE	Alu	AluSx1
CAediting_3412	chr1_2265055_+	SINE	Alu	AluSx1
CAediting_3413	chr1_2265074_+	SINE	Alu	AluSx1
CAediting_3414	chr1_2265705_+	SINE	Alu	AluJb
CAediting_3415	chr1_2265711_+	SINE	Alu	AluJb
CAediting_3416	chr1_2265720_+	SINE	Alu	AluJb
CAediting_3417	chr1_2265802_+	SINE	Alu	AluJb
CAediting_3418	chr1_2265810_+	SINE	Alu	AluJb
CAediting_3419	chr1_2265847_+	SINE	Alu	AluJb
CAediting_3420	chr1_2265861_+	SINE	Alu	AluJb
CAediting_3421	chr1_2265883_+	SINE	Alu	AluJb
CAediting_3422	chr1_2265888_+	SINE	Alu	AluJb
CAediting_3423	chr1_2265889_+	SINE	Alu	AluJb
CAediting_3426	chr1_2275630_+	SINE	Alu	AluY
CAediting_3427	chr1_2275642_+	SINE	Alu	AluY
CAediting_3428	chr1_2277187_+	SINE	Alu	AluSz6
CAediting_3429	chr1_2277211_+	SINE	Alu	AluSz6
CAediting_3430	chr1_2277233_+	SINE	Alu	AluSz6
CAediting_3431	chr1_2277235_+	SINE	Alu	AluSz6
CAediting_3432	chr1_2277255_+	SINE	Alu	AluSz6
CAediting_3433	chr1_2279806_+	SINE	Alu	FLAM_C
CAediting_3434	chr1_2280113_+	SINE	Alu	AluSg4
CAediting_3435	chr1_2280114_+	SINE	Alu	AluSg4
CAediting_3436	chr1_2280223_+	SINE	Alu	AluSg4
CAediting_3437	chr1_2280224_+	SINE	Alu	AluSg4
CAediting_3438	chr1_2280229_+	SINE	Alu	AluSg4
CAediting_3439	chr1_2280254_+	SINE	Alu	AluSg4
CAediting_3440	chr1_2280265_+	SINE	Alu	AluSg4
CAediting_3441	chr1_2285251_+	SINE	Alu	AluSq2
CAediting_3442	chr1_2285311_+	SINE	Alu	AluSq2
CAediting_3443	chr1_2285312_+	SINE	Alu	AluSq2
CAediting_3444	chr1_2285368_+	SINE	Alu	AluSq2
CAediting_3445	chr1_2285480_+	SINE	Alu	AluSq2
CAediting_3446	chr1_2285642_+	SINE	Alu	AluSx1
CAediting_3447	chr1_2285693_+	SINE	Alu	AluSx1
CAediting_3448	chr1_2285703_+	SINE	Alu	AluSx1
CAediting_3449	chr1_2285938_+	SINE	Alu	AluSx4
CAediting_3450	chr1_2285991_+	SINE	Alu	AluSx4
CAediting_3451	chr1_2286003_+	SINE	Alu	AluSx4
CAediting_3452	chr1_2286057_+	SINE	Alu	AluSx4
CAediting_3453	chr1_2286076_+	SINE	Alu	AluSx4
CAediting_3454	chr1_2286119_+	SINE	Alu	AluSx4
CAediting_3455	chr1_2286134_+	SINE	Alu	AluSx4
CAediting_3456	chr1_2286152_+	SINE	Alu	AluSx4
CAediting_3457	chr1_2286162_+	SINE	Alu	AluSx4
CAediting_3458	chr1_2286263_+	SINE	Alu	AluJb
CAediting_3459	chr1_2286277_+	SINE	Alu	AluJb
CAediting_3460	chr1_2286300_+	SINE	Alu	AluJb
CAediting_3461	chr1_2286312_+	SINE	Alu	AluJb
CAediting_3462	chr1_2286320_+	SINE	Alu	AluJb
CAediting_3463	chr1_2286331_+	SINE	Alu	AluJb
CAediting_3464	chr1_2286337_+	SINE	Alu	AluJb
CAediting_3465	chr1_2286339_+	SINE	Alu	AluJb
CAediting_3466	chr1_2286342_+	SINE	Alu	AluJb
CAediting_3467	chr1_2286343_+	SINE	Alu	AluJb
CAediting_3468	chr1_2286344_+	SINE	Alu	AluJb
CAediting_3469	chr1_2286348_+	SINE	Alu	AluJb
CAediting_3470	chr1_2286361_+	SINE	Alu	AluJb
CAediting_3471	chr1_2286372_+	SINE	Alu	AluJb
CAediting_3472	chr1_2286387_+	SINE	Alu	AluJb
CAediting_3473	chr1_2286428_+	SINE	Alu	AluJb
CAediting_3474	chr1_2286442_+	SINE	Alu	AluJb
CAediting_3475	chr1_2286451_+	SINE	Alu	AluJb
CAediting_3476	chr1_2286461_+	SINE	Alu	AluJb
CAediting_3477	chr1_2286477_+	SINE	Alu	AluJb
CAediting_3478	chr1_2288114_+	SINE	Alu	AluSp
CAediting_3479	chr1_2288305_+	SINE	Alu	AluSx
CAediting_3480	chr1_2288343_+	SINE	Alu	AluSx
CAediting_3481	chr1_2288365_+	SINE	Alu	AluSx
CAediting_3482	chr1_2288384_+	SINE	Alu	AluSx
CAediting_3484	chr1_2296123_+	SINE	Alu	AluJb
CAediting_3485	chr1_2296145_+	SINE	Alu	AluJb
CAediting_3486	chr1_2296154_+	SINE	Alu	AluJb
CAediting_3487	chr1_2296169_+	SINE	Alu	AluJb
CAediting_3488	chr1_2296274_+	SINE	Alu	AluJb
CAediting_3489	chr1_2296280_+	SINE	Alu	AluJb
CAediting_3490	chr1_2296284_+	SINE	Alu	AluJb
CAediting_3491	chr1_2296301_+	SINE	Alu	AluJb
CAediting_3492	chr1_2297162_+	SINE	Alu	AluJr
CAediting_3493	chr1_2297232_+	SINE	Alu	AluJr
CAediting_3494	chr1_2297233_+	SINE	Alu	AluJr

Top

RNA A-to-I editing events in the alternative splicing sites for SKI

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000157933.9.SKI.

Correlation between RNA A-to-I editing and PSI for ENSG00000157933.9.SKI.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for SKI

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for SKI

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SKI

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SKI

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000378536.4	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_3287	ENST00000378536.4	chr1_2229089_+	-2292.50	-2292.20	-2295.20
CAediting_3495	ENST00000378536.4	chr1_2308508_+	-2294.90	-2292.20	-2295.20
CAediting_3496	ENST00000378536.4	chr1_2309421_+	-2292.20	-2292.20	-2295.20

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Relation with ADAR for SKI

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for SKI

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for SKI

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for SKI

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SKI

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
SKI	C1321551	Shprintzen-Goldberg syndrome	4	CLINGEN;CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
SKI	C1842870	Chromosome 1p36 Deletion Syndrome	2	ORPHANET
SKI	C0003486	Aortic Aneurysm	1	CTD_human
SKI	C0011999	Diastematomyelia	1	CTD_human
SKI	C0027794	Neural Tube Defects	1	CTD_human
SKI	C0027806	Neurenteric Cyst	1	CTD_human
SKI	C0080218	Tethered Cord Syndrome	1	CTD_human
SKI	C0151491	Congenital musculoskeletal anomalies	1	CTD_human
SKI	C0152234	Iniencephaly	1	CTD_human
SKI	C0152426	Craniorachischisis	1	CTD_human
SKI	C0266453	Exencephaly	1	CTD_human
SKI	C0344479	Spinal Cord Myelodysplasia	1	CTD_human
SKI	C0376634	Craniofacial Abnormalities	1	CTD_human
SKI	C0702169	Acrania	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene