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Editing gene: STAG3L4 (CAeditome ID:64940)

Gene summary for STAG3L4

Gene summary

Gene information	Gene symbol	STAG3L4
	Gene ID	64940
	Gene name	stromal antigen 3-like 4 (pseudogene)
	Synonyms	STAG3L4P
	Cytomap	7q11.21
	Type of gene	pseudo
	Description	STAG3-like protein 4stromal antigen 3 pseudogene
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for STAG3L4

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000106610.13

RNA A-to-I editing events in Cancer.

CAediting_554875(67303124, +), CAediting_554876(67303276, +), CAediting_554877(67303395, +), CAediting_554878(67303435, +), CAediting_554879(67303443, +), CAediting_554880(67303470, +), CAediting_554881(67303477, +), CAediting_554882(67304061, +), CAediting_554883(67304078, +), CAediting_554884(67304090, +), CAediting_554885(67304100, +), CAediting_554886(67304144, +), CAediting_554887(67304220, +), CAediting_554888(67304249, +), CAediting_554889(67305309, +), CAediting_554890(67306249, +), CAediting_554891(67306250, +), CAediting_554892(67306295, +), CAediting_554893(67307189, +), CAediting_554894(67312382, +), CAediting_554895(67312391, +), CAediting_554896(67312392, +), CAediting_554897(67312398, +), CAediting_554898(67312399, +), CAediting_554899(67312404, +), CAediting_554900(67312425, +), CAediting_554901(67312468, +), CAediting_554902(67312475, +), CAediting_554903(67312493, +), CAediting_554904(67312495, +), CAediting_554905(67312496, +), CAediting_554906(67312525, +), CAediting_554907(67312533, +), CAediting_554908(67312534, +), CAediting_554909(67312539, +), CAediting_554910(67312557, +), CAediting_554911(67312563, +), CAediting_554912(67312565, +), CAediting_554913(67312566, +), CAediting_554914(67312574, +), CAediting_554915(67312575, +), CAediting_554916(67312579, +), CAediting_554917(67312582, +), CAediting_554918(67312586, +), CAediting_554919(67312588, +), CAediting_554920(67312595, +), CAediting_554921(67312599, +), CAediting_554922(67312603, +), CAediting_554923(67312604, +), CAediting_554924(67312609, +), CAediting_554925(67312611, +), CAediting_554926(67312641, +), CAediting_554927(67312642, +), CAediting_554928(67312846, +), CAediting_554929(67312874, +), CAediting_554930(67312886, +), CAediting_554931(67312897, +), CAediting_554932(67312962, +), CAediting_554933(67312964, +), CAediting_554934(67312986, +), CAediting_554935(67313020, +), CAediting_554936(67313037, +), CAediting_554937(67313086, +), CAediting_554938(67314349, +), CAediting_554939(67314352, +), CAediting_554940(67314353, +), CAediting_554941(67314354, +), CAediting_554942(67314401, +), CAediting_554943(67314426, +), CAediting_554944(67314427, +), CAediting_554945(67314437, +), CAediting_554946(67314448, +), CAediting_554947(67314739, +), CAediting_554948(67314754, +), CAediting_554949(67314755, +), CAediting_554950(67314760, +), CAediting_554951(67314771, +), CAediting_554952(67314776, +), CAediting_554953(67314800, +), CAediting_554954(67314809, +), CAediting_554955(67314831, +), CAediting_554956(67314834, +), CAediting_554957(67314845, +), CAediting_554958(67314847, +), CAediting_554959(67314848, +), CAediting_554960(67314852, +), CAediting_554961(67314855, +), CAediting_554962(67314864, +), CAediting_554963(67314890, +), CAediting_554964(67314900, +), CAediting_554965(67314913, +), CAediting_554966(67314927, +), CAediting_554967(67314932, +), CAediting_554968(67314953, +), CAediting_554969(67314956, +), CAediting_554970(67314957, +), CAediting_554971(67314969, +), CAediting_554972(67314994, +), CAediting_554973(67315777, +), CAediting_554974(67315789, +), CAediting_554975(67315920, +), CAediting_554976(67315924, +), CAediting_554977(67315942, +), CAediting_554978(67315943, +), CAediting_554979(67315969, +), CAediting_554980(67315973, +), CAediting_554981(67315988, +), CAediting_554982(67316012, +), CAediting_554983(67316021, +), CAediting_554984(67316022, +), CAediting_554985(67316023, +), CAediting_554986(67316037, +), CAediting_554987(67316040, +), CAediting_554988(67316057, +), CAediting_554989(67316081, +), CAediting_554990(67316083, +), CAediting_554991(67316084, +), CAediting_554992(67316089, +), CAediting_554993(67316093, +), CAediting_554994(67316097, +), CAediting_554995(67316131, +), CAediting_554996(67316134, +), CAediting_554997(67316262, +), CAediting_554998(67316344, +), CAediting_554999(67316358, +), CAediting_555000(67316384, +), CAediting_555001(67316385, +), CAediting_555002(67316426, +), CAediting_555003(67316450, +), CAediting_555004(67316455, +), CAediting_555005(67316492, +), CAediting_555006(67316579, +), CAediting_555007(67316580, +), CAediting_555008(67316615, +), CAediting_555009(67316623, +), CAediting_555010(67316657, +), CAediting_555011(67316677, +), CAediting_555012(67316712, +), CAediting_555013(67316713, +), CAediting_555014(67316964, +), CAediting_555015(67317031, +), CAediting_555016(67317032, +), CAediting_555017(67317041, +), CAediting_555018(67317085, +), CAediting_555019(67317101, +), CAediting_555020(67317176, +), CAediting_555021(67317341, +), CAediting_555022(67317345, +), CAediting_555023(67317411, +), CAediting_555024(67317414, +), CAediting_555025(67317428, +), CAediting_555026(67317431, +), CAediting_555027(67317440, +), CAediting_555028(67317452, +), CAediting_555029(67317465, +), CAediting_555030(67317466, +), CAediting_555031(67317668, +), CAediting_555032(67317669, +), CAediting_555033(67317747, +), CAediting_555034(67317751, +), CAediting_555035(67317759, +), CAediting_555036(67317779, +), CAediting_555037(67317845, +), CAediting_555038(67317859, +), CAediting_555039(67317886, +), CAediting_555040(67317915, +), CAediting_555041(67318051, +), CAediting_555042(67318056, +), CAediting_555043(67318087, +), CAediting_555044(67318088, +), CAediting_555045(67318090, +), CAediting_555046(67318101, +), CAediting_555047(67318105, +), CAediting_555048(67318110, +), CAediting_555049(67318119, +), CAediting_555050(67318145, +), CAediting_555051(67318146, +), CAediting_555052(67318180, +), CAediting_555053(67318205, +), CAediting_555054(67318471, +), CAediting_555055(67318514, +), CAediting_555056(67318563, +), CAediting_555057(67318992, +), CAediting_555058(67319078, +), CAediting_555059(67319080, +), CAediting_555060(67319104, +), CAediting_555061(67319200, +), CAediting_555062(67319261, +), CAediting_555063(67319302, +), CAediting_555064(67319307, +), CAediting_555065(67319338, +), CAediting_555066(67319355, +), CAediting_555067(67319367, +), CAediting_555068(67319418, +), CAediting_555069(67319421, +), CAediting_555070(67319435, +), CAediting_555071(67319447, +), CAediting_555072(67319497, +), CAediting_555073(67319515, +), CAediting_555074(67319667, +), CAediting_555075(67319749, +), CAediting_555076(67319766, +), CAediting_555077(67319774, +), CAediting_555078(67319814, +), CAediting_555079(67319815, +), CAediting_555080(67319823, +), CAediting_555081(67319832, +), CAediting_555082(67319838, +), CAediting_555083(67319840, +), CAediting_555084(67319867, +), CAediting_555085(67319898, +), CAediting_555086(67319907, +), CAediting_555087(67319908, +), CAediting_555088(67319920, +),

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RNA editing positional annotations for STAG3L4 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_554875	chr7_67303124_+	ncRNA_intronic
CAediting_554876	chr7_67303276_+	ncRNA_intronic
CAediting_554877	chr7_67303395_+	ncRNA_intronic
CAediting_554878	chr7_67303435_+	ncRNA_intronic
CAediting_554879	chr7_67303443_+	ncRNA_intronic
CAediting_554880	chr7_67303470_+	ncRNA_intronic
CAediting_554881	chr7_67303477_+	ncRNA_intronic
CAediting_554882	chr7_67304061_+	ncRNA_intronic
CAediting_554883	chr7_67304078_+	ncRNA_intronic
CAediting_554884	chr7_67304090_+	ncRNA_intronic
CAediting_554885	chr7_67304100_+	ncRNA_intronic
CAediting_554886	chr7_67304144_+	ncRNA_intronic
CAediting_554887	chr7_67304220_+	ncRNA_intronic
CAediting_554888	chr7_67304249_+	ncRNA_intronic
CAediting_554889	chr7_67305309_+	ncRNA_intronic
CAediting_554890	chr7_67306249_+	ncRNA_intronic
CAediting_554891	chr7_67306250_+	ncRNA_intronic
CAediting_554892	chr7_67306295_+	ncRNA_intronic
CAediting_554893	chr7_67307189_+	ncRNA_intronic
CAediting_554894	chr7_67312382_+	ncRNA_intronic
CAediting_554895	chr7_67312391_+	ncRNA_intronic
CAediting_554896	chr7_67312392_+	ncRNA_intronic
CAediting_554897	chr7_67312398_+	ncRNA_intronic
CAediting_554898	chr7_67312399_+	ncRNA_intronic
CAediting_554899	chr7_67312404_+	ncRNA_intronic
CAediting_554900	chr7_67312425_+	ncRNA_intronic
CAediting_554901	chr7_67312468_+	ncRNA_intronic
CAediting_554902	chr7_67312475_+	ncRNA_intronic
CAediting_554903	chr7_67312493_+	ncRNA_intronic
CAediting_554904	chr7_67312495_+	ncRNA_intronic
CAediting_554905	chr7_67312496_+	ncRNA_intronic
CAediting_554906	chr7_67312525_+	ncRNA_intronic
CAediting_554907	chr7_67312533_+	ncRNA_intronic
CAediting_554908	chr7_67312534_+	ncRNA_intronic
CAediting_554909	chr7_67312539_+	ncRNA_intronic
CAediting_554910	chr7_67312557_+	ncRNA_intronic
CAediting_554911	chr7_67312563_+	ncRNA_intronic
CAediting_554912	chr7_67312565_+	ncRNA_intronic
CAediting_554913	chr7_67312566_+	ncRNA_intronic
CAediting_554914	chr7_67312574_+	ncRNA_intronic
CAediting_554915	chr7_67312575_+	ncRNA_intronic
CAediting_554916	chr7_67312579_+	ncRNA_intronic
CAediting_554917	chr7_67312582_+	ncRNA_intronic
CAediting_554918	chr7_67312586_+	ncRNA_intronic
CAediting_554919	chr7_67312588_+	ncRNA_intronic
CAediting_554920	chr7_67312595_+	ncRNA_intronic
CAediting_554921	chr7_67312599_+	ncRNA_intronic
CAediting_554922	chr7_67312603_+	ncRNA_intronic
CAediting_554923	chr7_67312604_+	ncRNA_intronic
CAediting_554924	chr7_67312609_+	ncRNA_intronic
CAediting_554925	chr7_67312611_+	ncRNA_intronic
CAediting_554926	chr7_67312641_+	ncRNA_intronic
CAediting_554927	chr7_67312642_+	ncRNA_intronic
CAediting_554928	chr7_67312846_+	ncRNA_intronic
CAediting_554929	chr7_67312874_+	ncRNA_intronic
CAediting_554930	chr7_67312886_+	ncRNA_intronic
CAediting_554931	chr7_67312897_+	ncRNA_intronic
CAediting_554932	chr7_67312962_+	ncRNA_intronic
CAediting_554933	chr7_67312964_+	ncRNA_intronic
CAediting_554934	chr7_67312986_+	ncRNA_intronic
CAediting_554935	chr7_67313020_+	ncRNA_intronic
CAediting_554936	chr7_67313037_+	ncRNA_intronic
CAediting_554937	chr7_67313086_+	ncRNA_intronic
CAediting_554938	chr7_67314349_+	ncRNA_intronic
CAediting_554939	chr7_67314352_+	ncRNA_intronic
CAediting_554940	chr7_67314353_+	ncRNA_intronic
CAediting_554941	chr7_67314354_+	ncRNA_intronic
CAediting_554942	chr7_67314401_+	ncRNA_intronic
CAediting_554943	chr7_67314426_+	ncRNA_intronic
CAediting_554944	chr7_67314427_+	ncRNA_intronic
CAediting_554945	chr7_67314437_+	ncRNA_intronic
CAediting_554946	chr7_67314448_+	ncRNA_intronic
CAediting_554947	chr7_67314739_+	ncRNA_intronic
CAediting_554948	chr7_67314754_+	ncRNA_intronic
CAediting_554949	chr7_67314755_+	ncRNA_intronic
CAediting_554950	chr7_67314760_+	ncRNA_intronic
CAediting_554951	chr7_67314771_+	ncRNA_intronic
CAediting_554952	chr7_67314776_+	ncRNA_intronic
CAediting_554953	chr7_67314800_+	ncRNA_intronic
CAediting_554954	chr7_67314809_+	ncRNA_intronic
CAediting_554955	chr7_67314831_+	ncRNA_intronic
CAediting_554956	chr7_67314834_+	ncRNA_intronic
CAediting_554957	chr7_67314845_+	ncRNA_intronic
CAediting_554958	chr7_67314847_+	ncRNA_intronic
CAediting_554959	chr7_67314848_+	ncRNA_intronic
CAediting_554960	chr7_67314852_+	ncRNA_intronic
CAediting_554961	chr7_67314855_+	ncRNA_intronic
CAediting_554962	chr7_67314864_+	ncRNA_intronic
CAediting_554963	chr7_67314890_+	ncRNA_intronic
CAediting_554964	chr7_67314900_+	ncRNA_intronic
CAediting_554965	chr7_67314913_+	ncRNA_intronic
CAediting_554966	chr7_67314927_+	ncRNA_intronic
CAediting_554967	chr7_67314932_+	ncRNA_intronic
CAediting_554968	chr7_67314953_+	ncRNA_intronic
CAediting_554969	chr7_67314956_+	ncRNA_intronic
CAediting_554970	chr7_67314957_+	ncRNA_intronic
CAediting_554971	chr7_67314969_+	ncRNA_intronic
CAediting_554972	chr7_67314994_+	ncRNA_intronic
CAediting_554973	chr7_67315777_+	ncRNA_intronic
CAediting_554974	chr7_67315789_+	ncRNA_intronic
CAediting_554975	chr7_67315920_+	ncRNA_intronic
CAediting_554976	chr7_67315924_+	ncRNA_intronic
CAediting_554977	chr7_67315942_+	ncRNA_intronic
CAediting_554978	chr7_67315943_+	ncRNA_intronic
CAediting_554979	chr7_67315969_+	ncRNA_intronic
CAediting_554980	chr7_67315973_+	ncRNA_intronic
CAediting_554981	chr7_67315988_+	ncRNA_intronic
CAediting_554982	chr7_67316012_+	ncRNA_intronic
CAediting_554983	chr7_67316021_+	ncRNA_intronic
CAediting_554984	chr7_67316022_+	ncRNA_intronic
CAediting_554985	chr7_67316023_+	ncRNA_intronic
CAediting_554986	chr7_67316037_+	ncRNA_intronic
CAediting_554987	chr7_67316040_+	ncRNA_intronic
CAediting_554988	chr7_67316057_+	ncRNA_intronic
CAediting_554989	chr7_67316081_+	ncRNA_intronic
CAediting_554990	chr7_67316083_+	ncRNA_intronic
CAediting_554991	chr7_67316084_+	ncRNA_intronic
CAediting_554992	chr7_67316089_+	ncRNA_intronic
CAediting_554993	chr7_67316093_+	ncRNA_intronic
CAediting_554994	chr7_67316097_+	ncRNA_intronic
CAediting_554995	chr7_67316131_+	ncRNA_intronic
CAediting_554996	chr7_67316134_+	ncRNA_intronic
CAediting_554997	chr7_67316262_+	ncRNA_intronic
CAediting_554998	chr7_67316344_+	ncRNA_intronic
CAediting_554999	chr7_67316358_+	ncRNA_intronic
CAediting_555000	chr7_67316384_+	ncRNA_intronic
CAediting_555001	chr7_67316385_+	ncRNA_intronic
CAediting_555002	chr7_67316426_+	ncRNA_intronic
CAediting_555003	chr7_67316450_+	ncRNA_intronic
CAediting_555004	chr7_67316455_+	ncRNA_intronic
CAediting_555005	chr7_67316492_+	ncRNA_intronic
CAediting_555006	chr7_67316579_+	ncRNA_intronic
CAediting_555007	chr7_67316580_+	ncRNA_intronic
CAediting_555008	chr7_67316615_+	ncRNA_intronic
CAediting_555009	chr7_67316623_+	ncRNA_intronic
CAediting_555010	chr7_67316657_+	ncRNA_intronic
CAediting_555011	chr7_67316677_+	ncRNA_intronic
CAediting_555012	chr7_67316712_+	ncRNA_intronic
CAediting_555013	chr7_67316713_+	ncRNA_intronic
CAediting_555014	chr7_67316964_+	ncRNA_intronic
CAediting_555015	chr7_67317031_+	ncRNA_intronic
CAediting_555016	chr7_67317032_+	ncRNA_intronic
CAediting_555017	chr7_67317041_+	ncRNA_intronic
CAediting_555018	chr7_67317085_+	ncRNA_intronic
CAediting_555019	chr7_67317101_+	ncRNA_intronic
CAediting_555020	chr7_67317176_+	ncRNA_intronic
CAediting_555021	chr7_67317341_+	ncRNA_intronic
CAediting_555022	chr7_67317345_+	ncRNA_intronic
CAediting_555023	chr7_67317411_+	ncRNA_intronic
CAediting_555024	chr7_67317414_+	ncRNA_intronic
CAediting_555025	chr7_67317428_+	ncRNA_intronic
CAediting_555026	chr7_67317431_+	ncRNA_intronic
CAediting_555027	chr7_67317440_+	ncRNA_intronic
CAediting_555028	chr7_67317452_+	ncRNA_intronic
CAediting_555029	chr7_67317465_+	ncRNA_intronic
CAediting_555030	chr7_67317466_+	ncRNA_intronic
CAediting_555031	chr7_67317668_+	ncRNA_intronic
CAediting_555032	chr7_67317669_+	ncRNA_intronic
CAediting_555033	chr7_67317747_+	ncRNA_intronic
CAediting_555034	chr7_67317751_+	ncRNA_intronic
CAediting_555035	chr7_67317759_+	ncRNA_intronic
CAediting_555036	chr7_67317779_+	ncRNA_intronic
CAediting_555037	chr7_67317845_+	ncRNA_intronic
CAediting_555038	chr7_67317859_+	ncRNA_intronic
CAediting_555039	chr7_67317886_+	ncRNA_intronic
CAediting_555040	chr7_67317915_+	ncRNA_intronic
CAediting_555041	chr7_67318051_+	ncRNA_intronic
CAediting_555042	chr7_67318056_+	ncRNA_intronic
CAediting_555043	chr7_67318087_+	ncRNA_intronic
CAediting_555044	chr7_67318088_+	ncRNA_intronic
CAediting_555045	chr7_67318090_+	ncRNA_intronic
CAediting_555046	chr7_67318101_+	ncRNA_intronic
CAediting_555047	chr7_67318105_+	ncRNA_intronic
CAediting_555048	chr7_67318110_+	ncRNA_intronic
CAediting_555049	chr7_67318119_+	ncRNA_intronic
CAediting_555050	chr7_67318145_+	ncRNA_intronic
CAediting_555051	chr7_67318146_+	ncRNA_intronic
CAediting_555052	chr7_67318180_+	ncRNA_intronic
CAediting_555053	chr7_67318205_+	ncRNA_intronic
CAediting_555054	chr7_67318471_+	ncRNA_intronic
CAediting_555055	chr7_67318514_+	ncRNA_intronic
CAediting_555056	chr7_67318563_+	ncRNA_intronic
CAediting_555057	chr7_67318992_+	ncRNA_intronic
CAediting_555058	chr7_67319078_+	ncRNA_intronic
CAediting_555059	chr7_67319080_+	ncRNA_intronic
CAediting_555060	chr7_67319104_+	ncRNA_intronic
CAediting_555061	chr7_67319200_+	ncRNA_intronic
CAediting_555062	chr7_67319261_+	ncRNA_intronic
CAediting_555063	chr7_67319302_+	ncRNA_intronic
CAediting_555064	chr7_67319307_+	ncRNA_intronic
CAediting_555065	chr7_67319338_+	ncRNA_intronic
CAediting_555066	chr7_67319355_+	ncRNA_intronic
CAediting_555067	chr7_67319367_+	ncRNA_intronic
CAediting_555068	chr7_67319418_+	ncRNA_intronic
CAediting_555069	chr7_67319421_+	ncRNA_intronic
CAediting_555070	chr7_67319435_+	ncRNA_intronic
CAediting_555071	chr7_67319447_+	ncRNA_intronic
CAediting_555072	chr7_67319497_+	ncRNA_intronic
CAediting_555073	chr7_67319515_+	ncRNA_intronic
CAediting_555074	chr7_67319667_+	ncRNA_intronic
CAediting_555075	chr7_67319749_+	ncRNA_intronic
CAediting_555076	chr7_67319766_+	ncRNA_intronic
CAediting_555077	chr7_67319774_+	ncRNA_intronic
CAediting_555078	chr7_67319814_+	ncRNA_intronic
CAediting_555079	chr7_67319815_+	ncRNA_intronic
CAediting_555080	chr7_67319823_+	ncRNA_intronic
CAediting_555081	chr7_67319832_+	ncRNA_intronic
CAediting_555082	chr7_67319838_+	ncRNA_intronic
CAediting_555083	chr7_67319840_+	ncRNA_intronic
CAediting_555084	chr7_67319867_+	ncRNA_intronic
CAediting_555085	chr7_67319898_+	ncRNA_intronic
CAediting_555086	chr7_67319907_+	ncRNA_intronic
CAediting_555087	chr7_67319908_+	ncRNA_intronic
CAediting_555088	chr7_67319920_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_554875	chr7_67303124_+	SINE	Alu	AluSx1
CAediting_554876	chr7_67303276_+	SINE	Alu	AluSx1
CAediting_554877	chr7_67303395_+	SINE	Alu	AluJo
CAediting_554878	chr7_67303435_+	SINE	Alu	AluJo
CAediting_554879	chr7_67303443_+	SINE	Alu	AluJo
CAediting_554880	chr7_67303470_+	SINE	Alu	AluJo
CAediting_554881	chr7_67303477_+	SINE	Alu	AluJo
CAediting_554882	chr7_67304061_+	SINE	Alu	AluSc
CAediting_554883	chr7_67304078_+	SINE	Alu	AluSc
CAediting_554884	chr7_67304090_+	SINE	Alu	AluSc
CAediting_554885	chr7_67304100_+	SINE	Alu	AluSc
CAediting_554886	chr7_67304144_+	SINE	Alu	AluSc
CAediting_554887	chr7_67304220_+	SINE	Alu	AluSc
CAediting_554888	chr7_67304249_+	SINE	Alu	AluSc
CAediting_554889	chr7_67305309_+	SINE	Alu	AluSz
CAediting_554890	chr7_67306249_+	SINE	Alu	AluSz
CAediting_554891	chr7_67306250_+	SINE	Alu	AluSz
CAediting_554892	chr7_67306295_+	SINE	Alu	AluSz
CAediting_554893	chr7_67307189_+	SINE	Alu	AluSx4
CAediting_554894	chr7_67312382_+	SINE	Alu	AluSx
CAediting_554895	chr7_67312391_+	SINE	Alu	AluSx
CAediting_554896	chr7_67312392_+	SINE	Alu	AluSx
CAediting_554897	chr7_67312398_+	SINE	Alu	AluSx
CAediting_554898	chr7_67312399_+	SINE	Alu	AluSx
CAediting_554899	chr7_67312404_+	SINE	Alu	AluSx
CAediting_554900	chr7_67312425_+	SINE	Alu	AluSx
CAediting_554901	chr7_67312468_+	SINE	Alu	AluSx
CAediting_554902	chr7_67312475_+	SINE	Alu	AluSx
CAediting_554903	chr7_67312493_+	SINE	Alu	AluSx
CAediting_554904	chr7_67312495_+	SINE	Alu	AluSx
CAediting_554905	chr7_67312496_+	SINE	Alu	AluSx
CAediting_554906	chr7_67312525_+	SINE	Alu	AluSx
CAediting_554907	chr7_67312533_+	SINE	Alu	AluSx
CAediting_554908	chr7_67312534_+	SINE	Alu	AluSx
CAediting_554909	chr7_67312539_+	SINE	Alu	AluSx
CAediting_554910	chr7_67312557_+	SINE	Alu	AluSx
CAediting_554911	chr7_67312563_+	SINE	Alu	AluSx
CAediting_554912	chr7_67312565_+	SINE	Alu	AluSx
CAediting_554913	chr7_67312566_+	SINE	Alu	AluSx
CAediting_554914	chr7_67312574_+	SINE	Alu	AluSx
CAediting_554915	chr7_67312575_+	SINE	Alu	AluSx
CAediting_554916	chr7_67312579_+	SINE	Alu	AluSx
CAediting_554917	chr7_67312582_+	SINE	Alu	AluSx
CAediting_554918	chr7_67312586_+	SINE	Alu	AluSx
CAediting_554919	chr7_67312588_+	SINE	Alu	AluSx
CAediting_554920	chr7_67312595_+	SINE	Alu	AluSx
CAediting_554921	chr7_67312599_+	SINE	Alu	AluSx
CAediting_554922	chr7_67312603_+	SINE	Alu	AluSx
CAediting_554923	chr7_67312604_+	SINE	Alu	AluSx
CAediting_554924	chr7_67312609_+	SINE	Alu	AluSx
CAediting_554925	chr7_67312611_+	SINE	Alu	AluSx
CAediting_554926	chr7_67312641_+	SINE	Alu	AluSx
CAediting_554927	chr7_67312642_+	SINE	Alu	AluSx
CAediting_554928	chr7_67312846_+	SINE	Alu	AluJo
CAediting_554929	chr7_67312874_+	SINE	Alu	AluJo
CAediting_554930	chr7_67312886_+	SINE	Alu	AluJo
CAediting_554931	chr7_67312897_+	SINE	Alu	AluJo
CAediting_554932	chr7_67312962_+	SINE	Alu	AluJo
CAediting_554933	chr7_67312964_+	SINE	Alu	AluJo
CAediting_554934	chr7_67312986_+	SINE	Alu	AluJo
CAediting_554935	chr7_67313020_+	SINE	Alu	AluJo
CAediting_554936	chr7_67313037_+	SINE	Alu	AluJo
CAediting_554937	chr7_67313086_+	SINE	Alu	AluJo
CAediting_554938	chr7_67314349_+	SINE	Alu	AluSx1
CAediting_554939	chr7_67314352_+	SINE	Alu	AluSx1
CAediting_554940	chr7_67314353_+	SINE	Alu	AluSx1
CAediting_554941	chr7_67314354_+	SINE	Alu	AluSx1
CAediting_554942	chr7_67314401_+	SINE	Alu	AluSx1
CAediting_554943	chr7_67314426_+	SINE	Alu	AluSx1
CAediting_554944	chr7_67314427_+	SINE	Alu	AluSx1
CAediting_554945	chr7_67314437_+	SINE	Alu	AluSx1
CAediting_554946	chr7_67314448_+	SINE	Alu	AluSx1
CAediting_554947	chr7_67314739_+	SINE	Alu	AluJb
CAediting_554948	chr7_67314754_+	SINE	Alu	AluJb
CAediting_554949	chr7_67314755_+	SINE	Alu	AluJb
CAediting_554950	chr7_67314760_+	SINE	Alu	AluJb
CAediting_554951	chr7_67314771_+	SINE	Alu	AluJb
CAediting_554952	chr7_67314776_+	SINE	Alu	AluJb
CAediting_554953	chr7_67314800_+	SINE	Alu	AluJb
CAediting_554954	chr7_67314809_+	SINE	Alu	AluJb
CAediting_554955	chr7_67314831_+	SINE	Alu	AluJb
CAediting_554956	chr7_67314834_+	SINE	Alu	AluJb
CAediting_554957	chr7_67314845_+	SINE	Alu	AluJb
CAediting_554958	chr7_67314847_+	SINE	Alu	AluJb
CAediting_554959	chr7_67314848_+	SINE	Alu	AluJb
CAediting_554960	chr7_67314852_+	SINE	Alu	AluJb
CAediting_554961	chr7_67314855_+	SINE	Alu	AluJb
CAediting_554962	chr7_67314864_+	SINE	Alu	AluJb
CAediting_554963	chr7_67314890_+	SINE	Alu	AluJb
CAediting_554964	chr7_67314900_+	SINE	Alu	AluJb
CAediting_554965	chr7_67314913_+	SINE	Alu	AluJb
CAediting_554966	chr7_67314927_+	SINE	Alu	AluJb
CAediting_554967	chr7_67314932_+	SINE	Alu	AluJb
CAediting_554968	chr7_67314953_+	SINE	Alu	AluJb
CAediting_554969	chr7_67314956_+	SINE	Alu	AluJb
CAediting_554970	chr7_67314957_+	SINE	Alu	AluJb
CAediting_554971	chr7_67314969_+	SINE	Alu	AluJb
CAediting_554972	chr7_67314994_+	SINE	Alu	AluJb
CAediting_554973	chr7_67315777_+	SINE	Alu	AluY
CAediting_554974	chr7_67315789_+	SINE	Alu	AluY
CAediting_554975	chr7_67315920_+	SINE	Alu	AluSz
CAediting_554976	chr7_67315924_+	SINE	Alu	AluSz
CAediting_554977	chr7_67315942_+	SINE	Alu	AluSz
CAediting_554978	chr7_67315943_+	SINE	Alu	AluSz
CAediting_554979	chr7_67315969_+	SINE	Alu	AluSz
CAediting_554980	chr7_67315973_+	SINE	Alu	AluSz
CAediting_554981	chr7_67315988_+	SINE	Alu	AluSz
CAediting_554982	chr7_67316012_+	SINE	Alu	AluSz
CAediting_554983	chr7_67316021_+	SINE	Alu	AluSz
CAediting_554984	chr7_67316022_+	SINE	Alu	AluSz
CAediting_554985	chr7_67316023_+	SINE	Alu	AluSz
CAediting_554986	chr7_67316037_+	SINE	Alu	AluSz
CAediting_554987	chr7_67316040_+	SINE	Alu	AluSz
CAediting_554988	chr7_67316057_+	SINE	Alu	AluSz
CAediting_554989	chr7_67316081_+	SINE	Alu	AluSz
CAediting_554990	chr7_67316083_+	SINE	Alu	AluSz
CAediting_554991	chr7_67316084_+	SINE	Alu	AluSz
CAediting_554992	chr7_67316089_+	SINE	Alu	AluSz
CAediting_554993	chr7_67316093_+	SINE	Alu	AluSz
CAediting_554994	chr7_67316097_+	SINE	Alu	AluSz
CAediting_554995	chr7_67316131_+	SINE	Alu	AluSz
CAediting_554996	chr7_67316134_+	SINE	Alu	AluSz
CAediting_554997	chr7_67316262_+	SINE	Alu	AluSx1
CAediting_554998	chr7_67316344_+	SINE	Alu	AluSx1
CAediting_554999	chr7_67316358_+	SINE	Alu	AluSx1
CAediting_555000	chr7_67316384_+	SINE	Alu	AluSx1
CAediting_555001	chr7_67316385_+	SINE	Alu	AluSx1
CAediting_555002	chr7_67316426_+	SINE	Alu	AluSx1
CAediting_555003	chr7_67316450_+	SINE	Alu	AluSx1
CAediting_555004	chr7_67316455_+	SINE	Alu	AluSx1
CAediting_555005	chr7_67316492_+	SINE	Alu	AluSx1
CAediting_555006	chr7_67316579_+	SINE	Alu	AluSg
CAediting_555007	chr7_67316580_+	SINE	Alu	AluSg
CAediting_555008	chr7_67316615_+	SINE	Alu	AluSg
CAediting_555009	chr7_67316623_+	SINE	Alu	AluSg
CAediting_555010	chr7_67316657_+	SINE	Alu	AluSg
CAediting_555011	chr7_67316677_+	SINE	Alu	AluSg
CAediting_555012	chr7_67316712_+	SINE	Alu	AluSg
CAediting_555013	chr7_67316713_+	SINE	Alu	AluSg
CAediting_555014	chr7_67316964_+	SINE	Alu	AluJb
CAediting_555015	chr7_67317031_+	SINE	Alu	AluJb
CAediting_555016	chr7_67317032_+	SINE	Alu	AluJb
CAediting_555017	chr7_67317041_+	SINE	Alu	AluJb
CAediting_555018	chr7_67317085_+	SINE	Alu	AluJb
CAediting_555019	chr7_67317101_+	SINE	Alu	AluJb
CAediting_555020	chr7_67317176_+	SINE	Alu	AluJb
CAediting_555021	chr7_67317341_+	SINE	Alu	AluSz
CAediting_555022	chr7_67317345_+	SINE	Alu	AluSz
CAediting_555023	chr7_67317411_+	SINE	Alu	AluSz
CAediting_555024	chr7_67317414_+	SINE	Alu	AluSz
CAediting_555025	chr7_67317428_+	SINE	Alu	AluSz
CAediting_555026	chr7_67317431_+	SINE	Alu	AluSz
CAediting_555027	chr7_67317440_+	SINE	Alu	AluSz
CAediting_555028	chr7_67317452_+	SINE	Alu	AluSz
CAediting_555029	chr7_67317465_+	SINE	Alu	AluSz
CAediting_555030	chr7_67317466_+	SINE	Alu	AluSz
CAediting_555033	chr7_67317747_+	SINE	Alu	AluJr
CAediting_555034	chr7_67317751_+	SINE	Alu	AluJr
CAediting_555035	chr7_67317759_+	SINE	Alu	AluJr
CAediting_555036	chr7_67317779_+	SINE	Alu	AluJr
CAediting_555037	chr7_67317845_+	SINE	Alu	AluJr
CAediting_555038	chr7_67317859_+	SINE	Alu	AluJr
CAediting_555039	chr7_67317886_+	SINE	Alu	AluJr
CAediting_555040	chr7_67317915_+	SINE	Alu	AluJr
CAediting_555041	chr7_67318051_+	SINE	Alu	AluSx1
CAediting_555042	chr7_67318056_+	SINE	Alu	AluSx1
CAediting_555043	chr7_67318087_+	SINE	Alu	AluSx1
CAediting_555044	chr7_67318088_+	SINE	Alu	AluSx1
CAediting_555045	chr7_67318090_+	SINE	Alu	AluSx1
CAediting_555046	chr7_67318101_+	SINE	Alu	AluSx1
CAediting_555047	chr7_67318105_+	SINE	Alu	AluSx1
CAediting_555048	chr7_67318110_+	SINE	Alu	AluSx1
CAediting_555049	chr7_67318119_+	SINE	Alu	AluSx1
CAediting_555050	chr7_67318145_+	SINE	Alu	AluSx1
CAediting_555051	chr7_67318146_+	SINE	Alu	AluSx1
CAediting_555052	chr7_67318180_+	SINE	Alu	AluSx1
CAediting_555053	chr7_67318205_+	SINE	Alu	AluSx1
CAediting_555054	chr7_67318471_+	SINE	Alu	AluY
CAediting_555055	chr7_67318514_+	SINE	Alu	AluY
CAediting_555056	chr7_67318563_+	SINE	Alu	AluY
CAediting_555057	chr7_67318992_+	SINE	Alu	AluSq
CAediting_555058	chr7_67319078_+	SINE	Alu	AluSq
CAediting_555059	chr7_67319080_+	SINE	Alu	AluSq
CAediting_555060	chr7_67319104_+	SINE	Alu	AluSq
CAediting_555061	chr7_67319200_+	SINE	Alu	AluSq
CAediting_555062	chr7_67319261_+	SINE	Alu	AluSx
CAediting_555063	chr7_67319302_+	SINE	Alu	AluSx
CAediting_555064	chr7_67319307_+	SINE	Alu	AluSx
CAediting_555065	chr7_67319338_+	SINE	Alu	AluSx
CAediting_555066	chr7_67319355_+	SINE	Alu	AluSx
CAediting_555067	chr7_67319367_+	SINE	Alu	AluSx
CAediting_555068	chr7_67319418_+	SINE	Alu	AluSx
CAediting_555069	chr7_67319421_+	SINE	Alu	AluSx
CAediting_555070	chr7_67319435_+	SINE	Alu	AluSx
CAediting_555071	chr7_67319447_+	SINE	Alu	AluSx
CAediting_555072	chr7_67319497_+	SINE	Alu	AluSx
CAediting_555073	chr7_67319515_+	SINE	Alu	AluSx
CAediting_555074	chr7_67319667_+	SINE	Alu	AluSz
CAediting_555075	chr7_67319749_+	SINE	Alu	AluSz
CAediting_555076	chr7_67319766_+	SINE	Alu	AluSz
CAediting_555077	chr7_67319774_+	SINE	Alu	AluSz
CAediting_555078	chr7_67319814_+	SINE	Alu	AluSz
CAediting_555079	chr7_67319815_+	SINE	Alu	AluSz
CAediting_555080	chr7_67319823_+	SINE	Alu	AluSz
CAediting_555081	chr7_67319832_+	SINE	Alu	AluSz
CAediting_555082	chr7_67319838_+	SINE	Alu	AluSz
CAediting_555083	chr7_67319840_+	SINE	Alu	AluSz
CAediting_555084	chr7_67319867_+	SINE	Alu	AluSz
CAediting_555085	chr7_67319898_+	SINE	Alu	AluSz
CAediting_555086	chr7_67319907_+	SINE	Alu	AluSz
CAediting_555087	chr7_67319908_+	SINE	Alu	AluSz
CAediting_555088	chr7_67319920_+	SINE	Alu	AluSz

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RNA A-to-I editing events in the alternative splicing sites for STAG3L4

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000106610.13.STAG3L4.

Correlation between RNA A-to-I editing and PSI for ENSG00000106610.13.STAG3L4.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for STAG3L4

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for STAG3L4

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for STAG3L4

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for STAG3L4

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for STAG3L4

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for STAG3L4

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for STAG3L4

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for STAG3L4

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for STAG3L4

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene