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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: ATL2 (CAeditome ID:64225)

Gene summary for ATL2

check button Gene summary
Gene informationGene symbol

ATL2

Gene ID

64225

Gene nameatlastin GTPase 2
SynonymsARL3IP2|ARL6IP2|aip-2|atlastin2
Cytomap

2p22.2-p22.1

Type of geneprotein-coding
Descriptionatlastin-2ADP-ribosylation factor-like protein 6-interacting protein 2ARL-6-interacting protein 2
Modification date20210522
UniProtAcc

Q8NHH9

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
ATL2

GO:0042802

Atlastin-2

18270207

ATL2

GO:0051260

Atlastin-2

18270207

ATL2

GO:0005783

Atlastin-2

0000052

ATL2

GO:0005783

Atlastin-2

18270207

ATL2

GO:0016021

Atlastin-2

18270207

ATL2

GO:0098826

Atlastin-2

27619977


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RNA A-to-I events for ATL2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000119787.12

check button RNA A-to-I editing events in Cancer.
CAediting_171150(38300724, -), CAediting_171151(38300771, -), CAediting_171152(38301063, -), CAediting_171153(38301067, -), CAediting_171154(38301068, -), CAediting_171155(38301108, -), CAediting_171156(38301109, -), CAediting_171157(38301143, -), CAediting_171158(38301145, -), CAediting_171159(38301148, -), CAediting_171160(38301149, -), CAediting_171161(38301163, -), CAediting_171162(38301173, -), CAediting_171163(38301174, -), CAediting_171164(38301183, -), CAediting_171165(38301219, -), CAediting_171166(38301242, -), CAediting_171167(38301243, -), CAediting_171168(38301261, -), CAediting_171169(38301265, -), CAediting_171170(38303291, -), CAediting_171171(38303317, -), CAediting_171172(38303334, -), CAediting_171173(38303338, -), CAediting_171174(38303344, -), CAediting_171175(38303370, -), CAediting_171176(38303379, -), CAediting_171177(38303383, -), CAediting_171178(38303384, -), CAediting_171179(38303385, -), CAediting_171180(38303386, -), CAediting_171181(38303422, -), CAediting_171182(38303459, -), CAediting_171183(38303464, -), CAediting_171184(38303473, -), CAediting_171185(38303482, -), CAediting_171186(38303873, -), CAediting_171187(38303875, -), CAediting_171188(38303887, -), CAediting_171189(38303888, -), CAediting_171190(38303911, -), CAediting_171191(38303963, -), CAediting_171192(38303965, -), CAediting_171193(38303967, -), CAediting_171194(38304007, -), CAediting_171195(38304012, -), CAediting_171196(38304020, -), CAediting_171197(38304029, -), CAediting_171198(38304046, -), CAediting_171199(38304095, -), CAediting_171200(38305284, -), CAediting_171201(38305303, -), CAediting_171202(38305345, -), CAediting_171203(38305356, -), CAediting_171204(38305365, -), CAediting_171205(38305385, -), CAediting_171206(38305427, -), CAediting_171207(38305503, -), CAediting_171208(38305542, -), CAediting_171209(38307186, -), CAediting_171210(38307201, -), CAediting_171211(38307236, -), CAediting_171212(38307268, -), CAediting_171213(38307269, -), CAediting_171214(38307271, -), CAediting_171215(38307275, -), CAediting_171216(38307297, -), CAediting_171217(38307298, -), CAediting_171218(38307313, -), CAediting_171219(38307330, -), CAediting_171220(38307337, -), CAediting_171221(38307338, -), CAediting_171222(38307348, -), CAediting_171223(38307350, -), CAediting_171224(38307353, -), CAediting_171225(38307354, -), CAediting_171226(38307355, -), CAediting_171227(38307356, -), CAediting_171228(38307358, -), CAediting_171229(38307360, -), CAediting_171230(38307361, -), CAediting_171231(38307363, -), CAediting_171232(38307366, -), CAediting_171233(38307477, -), CAediting_171234(38307495, -), CAediting_171235(38307496, -), CAediting_171236(38307497, -), CAediting_171237(38307533, -), CAediting_171238(38307554, -), CAediting_171239(38307569, -), CAediting_171240(38307573, -), CAediting_171241(38307581, -), CAediting_171242(38310770, -), CAediting_171243(38310807, -), CAediting_171244(38310851, -), CAediting_171245(38319504, -), CAediting_171246(38320900, -), CAediting_171247(38321033, -), CAediting_171248(38321047, -), CAediting_171249(38321072, -), CAediting_171250(38321121, -), CAediting_171251(38321707, -), CAediting_171252(38321760, -), CAediting_171253(38321796, -), CAediting_171254(38321799, -), CAediting_171255(38321828, -), CAediting_171256(38321834, -), CAediting_171257(38321837, -), CAediting_171258(38321841, -), CAediting_171259(38321845, -), CAediting_171260(38321851, -), CAediting_171261(38321873, -), CAediting_171262(38321886, -), CAediting_171263(38321889, -), CAediting_171264(38321891, -), CAediting_171265(38321892, -), CAediting_171266(38321895, -), CAediting_171267(38323414, -), CAediting_171268(38323415, -), CAediting_171269(38323422, -), CAediting_171270(38323423, -), CAediting_171271(38323446, -), CAediting_171272(38323471, -), CAediting_171273(38323476, -), CAediting_171274(38323477, -), CAediting_171275(38323495, -), CAediting_171276(38326840, -), CAediting_171277(38327922, -), CAediting_171278(38331052, -), CAediting_171279(38331292, -), CAediting_171280(38331324, -), CAediting_171281(38332299, -), CAediting_171282(38332304, -), CAediting_171283(38332322, -), CAediting_171284(38332323, -), CAediting_171285(38332331, -), CAediting_171286(38332335, -), CAediting_171287(38332339, -), CAediting_171288(38332345, -), CAediting_171289(38332366, -), CAediting_171290(38332374, -), CAediting_171291(38332957, -), CAediting_171292(38333142, -), CAediting_171293(38333289, -), CAediting_171294(38334095, -), CAediting_171295(38334106, -), CAediting_171296(38334115, -), CAediting_171297(38334127, -), CAediting_171298(38334138, -), CAediting_171299(38334154, -), CAediting_171300(38334162, -), CAediting_171301(38334167, -), CAediting_171302(38334168, -), CAediting_171303(38334190, -), CAediting_171304(38334194, -), CAediting_171305(38334197, -), CAediting_171306(38334206, -), CAediting_171307(38334207, -), CAediting_171308(38334208, -), CAediting_171309(38334209, -), CAediting_171310(38334223, -), CAediting_171311(38334231, -), CAediting_171312(38334276, -), CAediting_171313(38334289, -), CAediting_171314(38334303, -), CAediting_171315(38334445, -), CAediting_171316(38334467, -), CAediting_171317(38334536, -), CAediting_171318(38334576, -), CAediting_171319(38334598, -), CAediting_171320(38334612, -), CAediting_171321(38334651, -), CAediting_171322(38334695, -), CAediting_171323(38335798, -), CAediting_171324(38335807, -), CAediting_171325(38335851, -), CAediting_171326(38335876, -), CAediting_171327(38335882, -), CAediting_171328(38335892, -), CAediting_171329(38335918, -), CAediting_171330(38336008, -), CAediting_171331(38337400, -), CAediting_171332(38338956, -), CAediting_171333(38338980, -), CAediting_171334(38339013, -), CAediting_171335(38339094, -), CAediting_171336(38339159, -), CAediting_171337(38339211, -), CAediting_171338(38339726, -), CAediting_171339(38339828, -), CAediting_171340(38339829, -), CAediting_171341(38339855, -), CAediting_171342(38339884, -), CAediting_171343(38339918, -), CAediting_171344(38343026, -), CAediting_171345(38343036, -), CAediting_171346(38343065, -), CAediting_171347(38343066, -), CAediting_171348(38343072, -), CAediting_171349(38343091, -), CAediting_171350(38343098, -), CAediting_171351(38343126, -), CAediting_171352(38347827, -), CAediting_171353(38347843, -), CAediting_171354(38347852, -), CAediting_171355(38347859, -), CAediting_171356(38347863, -), CAediting_171357(38347864, -), CAediting_171358(38347872, -), CAediting_171359(38347880, -), CAediting_171360(38347882, -), CAediting_171361(38347895, -), CAediting_171362(38347931, -), CAediting_171363(38347942, -), CAediting_171364(38347943, -), CAediting_171365(38347944, -), CAediting_171366(38347945, -), CAediting_171367(38347946, -), CAediting_171368(38347949, -), CAediting_171369(38347960, -), CAediting_171370(38347961, -), CAediting_171371(38347994, -), CAediting_171372(38348004, -), CAediting_171373(38348039, -), CAediting_171374(38348062, -), CAediting_171375(38348188, -), CAediting_171376(38348301, -), CAediting_171377(38348304, -), CAediting_171378(38348317, -), CAediting_171379(38348366, -), CAediting_171380(38348384, -), CAediting_171381(38348403, -), CAediting_171382(38351658, -), CAediting_171383(38351689, -), CAediting_171384(38351696, -), CAediting_171385(38351766, -), CAediting_171386(38351855, -), CAediting_171387(38354070, -), CAediting_171388(38354084, -), CAediting_171389(38354092, -), CAediting_171390(38354646, -), CAediting_171391(38354742, -), CAediting_171392(38354777, -), CAediting_171393(38354778, -), CAediting_171394(38354844, -), CAediting_171395(38355760, -), CAediting_171396(38355821, -), CAediting_171397(38355824, -), CAediting_171398(38355828, -), CAediting_171399(38355832, -), CAediting_171400(38355888, -), CAediting_171401(38355898, -), CAediting_171402(38355914, -), CAediting_171403(38356279, -), CAediting_171404(38356315, -), CAediting_171405(38356325, -), CAediting_171406(38356326, -), CAediting_171407(38356332, -), CAediting_171408(38356349, -), CAediting_171409(38356382, -), CAediting_171410(38356392, -), CAediting_171411(38356407, -), CAediting_171412(38356465, -), CAediting_171413(38357079, -), CAediting_171414(38357086, -), CAediting_171415(38358458, -), CAediting_171416(38360018, -), CAediting_171417(38360022, -), CAediting_171418(38360067, -), CAediting_171419(38360358, -), CAediting_171420(38360364, -), CAediting_171421(38360383, -), CAediting_171422(38360401, -), CAediting_171423(38360406, -), CAediting_171424(38360407, -), CAediting_171425(38360410, -), CAediting_171426(38360414, -), CAediting_171427(38360418, -), CAediting_171428(38360481, -), CAediting_171429(38360528, -), CAediting_171430(38360550, -), CAediting_171431(38367092, -), CAediting_171432(38367093, -), CAediting_171433(38367761, -), CAediting_171434(38367771, -), CAediting_171435(38367892, -), CAediting_171436(38368024, -), CAediting_171437(38368031, -), CAediting_171438(38368032, -), CAediting_171439(38368099, -), CAediting_171440(38368129, -), CAediting_171441(38368139, -), CAediting_171442(38368923, -),

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RNA editing positional annotations for ATL2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_171387chr2_38354070_-nonsynonymous SNVENST00000451483.1c.A226Gp.T76AD.N
CAediting_171387chr2_38354070_-nonsynonymous SNVENST00000456736.4c.A226Gp.T76AD.N
CAediting_171388chr2_38354084_-nonsynonymous SNVENST00000451483.1c.A212Gp.Q71RD.N
CAediting_171388chr2_38354084_-nonsynonymous SNVENST00000456736.4c.A212Gp.Q71RD.N

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_171150chr2_38300724_-intronic
CAediting_171151chr2_38300771_-intronic
CAediting_171152chr2_38301063_-intronic
CAediting_171153chr2_38301067_-intronic
CAediting_171154chr2_38301068_-intronic
CAediting_171155chr2_38301108_-intronic
CAediting_171156chr2_38301109_-intronic
CAediting_171157chr2_38301143_-intronic
CAediting_171158chr2_38301145_-intronic
CAediting_171159chr2_38301148_-intronic
CAediting_171160chr2_38301149_-intronic
CAediting_171161chr2_38301163_-intronic
CAediting_171162chr2_38301173_-intronic
CAediting_171163chr2_38301174_-intronic
CAediting_171164chr2_38301183_-intronic
CAediting_171165chr2_38301219_-intronic
CAediting_171166chr2_38301242_-intronic
CAediting_171167chr2_38301243_-intronic
CAediting_171168chr2_38301261_-intronic
CAediting_171169chr2_38301265_-intronic
CAediting_171170chr2_38303291_-intronic
CAediting_171171chr2_38303317_-intronic
CAediting_171172chr2_38303334_-intronic
CAediting_171173chr2_38303338_-intronic
CAediting_171174chr2_38303344_-intronic
CAediting_171175chr2_38303370_-intronic
CAediting_171176chr2_38303379_-intronic
CAediting_171177chr2_38303383_-intronic
CAediting_171178chr2_38303384_-intronic
CAediting_171179chr2_38303385_-intronic
CAediting_171180chr2_38303386_-intronic
CAediting_171181chr2_38303422_-intronic
CAediting_171182chr2_38303459_-intronic
CAediting_171183chr2_38303464_-intronic
CAediting_171184chr2_38303473_-intronic
CAediting_171185chr2_38303482_-intronic
CAediting_171186chr2_38303873_-intronic
CAediting_171187chr2_38303875_-intronic
CAediting_171188chr2_38303887_-intronic
CAediting_171189chr2_38303888_-intronic
CAediting_171190chr2_38303911_-intronic
CAediting_171191chr2_38303963_-intronic
CAediting_171192chr2_38303965_-intronic
CAediting_171193chr2_38303967_-intronic
CAediting_171194chr2_38304007_-intronic
CAediting_171195chr2_38304012_-intronic
CAediting_171196chr2_38304020_-intronic
CAediting_171197chr2_38304029_-intronic
CAediting_171198chr2_38304046_-intronic
CAediting_171199chr2_38304095_-intronic
CAediting_171200chr2_38305284_-intronic
CAediting_171201chr2_38305303_-intronic
CAediting_171202chr2_38305345_-intronic
CAediting_171203chr2_38305356_-intronic
CAediting_171204chr2_38305365_-intronic
CAediting_171205chr2_38305385_-intronic
CAediting_171206chr2_38305427_-intronic
CAediting_171207chr2_38305503_-intronic
CAediting_171208chr2_38305542_-intronic
CAediting_171209chr2_38307186_-intronic
CAediting_171210chr2_38307201_-intronic
CAediting_171211chr2_38307236_-intronic
CAediting_171212chr2_38307268_-intronic
CAediting_171213chr2_38307269_-intronic
CAediting_171214chr2_38307271_-intronic
CAediting_171215chr2_38307275_-intronic
CAediting_171216chr2_38307297_-intronic
CAediting_171217chr2_38307298_-intronic
CAediting_171218chr2_38307313_-intronic
CAediting_171219chr2_38307330_-intronic
CAediting_171220chr2_38307337_-intronic
CAediting_171221chr2_38307338_-intronic
CAediting_171222chr2_38307348_-intronic
CAediting_171223chr2_38307350_-intronic
CAediting_171224chr2_38307353_-intronic
CAediting_171225chr2_38307354_-intronic
CAediting_171226chr2_38307355_-intronic
CAediting_171227chr2_38307356_-intronic
CAediting_171228chr2_38307358_-intronic
CAediting_171229chr2_38307360_-intronic
CAediting_171230chr2_38307361_-intronic
CAediting_171231chr2_38307363_-intronic
CAediting_171232chr2_38307366_-intronic
CAediting_171233chr2_38307477_-intronic
CAediting_171234chr2_38307495_-intronic
CAediting_171235chr2_38307496_-intronic
CAediting_171236chr2_38307497_-intronic
CAediting_171237chr2_38307533_-intronic
CAediting_171238chr2_38307554_-intronic
CAediting_171239chr2_38307569_-intronic
CAediting_171240chr2_38307573_-intronic
CAediting_171241chr2_38307581_-intronic
CAediting_171242chr2_38310770_-intronic
CAediting_171243chr2_38310807_-intronic
CAediting_171244chr2_38310851_-intronic
CAediting_171245chr2_38319504_-ncRNA_intronic
CAediting_171246chr2_38320900_-ncRNA_intronic
CAediting_171247chr2_38321033_-ncRNA_intronic
CAediting_171248chr2_38321047_-ncRNA_intronic
CAediting_171249chr2_38321072_-ncRNA_intronic
CAediting_171250chr2_38321121_-ncRNA_intronic
CAediting_171251chr2_38321707_-ncRNA_intronic
CAediting_171252chr2_38321760_-ncRNA_intronic
CAediting_171253chr2_38321796_-ncRNA_intronic
CAediting_171254chr2_38321799_-ncRNA_intronic
CAediting_171255chr2_38321828_-ncRNA_intronic
CAediting_171256chr2_38321834_-ncRNA_intronic
CAediting_171257chr2_38321837_-ncRNA_intronic
CAediting_171258chr2_38321841_-ncRNA_intronic
CAediting_171259chr2_38321845_-ncRNA_intronic
CAediting_171260chr2_38321851_-ncRNA_intronic
CAediting_171261chr2_38321873_-ncRNA_intronic
CAediting_171262chr2_38321886_-ncRNA_intronic
CAediting_171263chr2_38321889_-ncRNA_intronic
CAediting_171264chr2_38321891_-ncRNA_intronic
CAediting_171265chr2_38321892_-ncRNA_intronic
CAediting_171266chr2_38321895_-ncRNA_intronic
CAediting_171267chr2_38323414_-ncRNA_intronic
CAediting_171268chr2_38323415_-ncRNA_intronic
CAediting_171269chr2_38323422_-ncRNA_intronic
CAediting_171270chr2_38323423_-ncRNA_intronic
CAediting_171271chr2_38323446_-ncRNA_intronic
CAediting_171272chr2_38323471_-ncRNA_intronic
CAediting_171273chr2_38323476_-ncRNA_intronic
CAediting_171274chr2_38323477_-ncRNA_intronic
CAediting_171275chr2_38323495_-ncRNA_intronic
CAediting_171276chr2_38326840_-ncRNA_intronic
CAediting_171277chr2_38327922_-ncRNA_intronic
CAediting_171278chr2_38331052_-ncRNA_intronic
CAediting_171279chr2_38331292_-ncRNA_intronic
CAediting_171280chr2_38331324_-ncRNA_intronic
CAediting_171281chr2_38332299_-ncRNA_intronic
CAediting_171282chr2_38332304_-ncRNA_intronic
CAediting_171283chr2_38332322_-ncRNA_intronic
CAediting_171284chr2_38332323_-ncRNA_intronic
CAediting_171285chr2_38332331_-ncRNA_intronic
CAediting_171286chr2_38332335_-ncRNA_intronic
CAediting_171287chr2_38332339_-ncRNA_intronic
CAediting_171288chr2_38332345_-ncRNA_intronic
CAediting_171289chr2_38332366_-ncRNA_intronic
CAediting_171290chr2_38332374_-ncRNA_intronic
CAediting_171291chr2_38332957_-ncRNA_intronic
CAediting_171292chr2_38333142_-ncRNA_intronic
CAediting_171293chr2_38333289_-ncRNA_intronic
CAediting_171294chr2_38334095_-ncRNA_intronic
CAediting_171295chr2_38334106_-ncRNA_intronic
CAediting_171296chr2_38334115_-ncRNA_intronic
CAediting_171297chr2_38334127_-ncRNA_intronic
CAediting_171298chr2_38334138_-ncRNA_intronic
CAediting_171299chr2_38334154_-ncRNA_intronic
CAediting_171300chr2_38334162_-ncRNA_intronic
CAediting_171301chr2_38334167_-ncRNA_intronic
CAediting_171302chr2_38334168_-ncRNA_intronic
CAediting_171303chr2_38334190_-ncRNA_intronic
CAediting_171304chr2_38334194_-ncRNA_intronic
CAediting_171305chr2_38334197_-ncRNA_intronic
CAediting_171306chr2_38334206_-ncRNA_intronic
CAediting_171307chr2_38334207_-ncRNA_intronic
CAediting_171308chr2_38334208_-ncRNA_intronic
CAediting_171309chr2_38334209_-ncRNA_intronic
CAediting_171310chr2_38334223_-ncRNA_intronic
CAediting_171311chr2_38334231_-ncRNA_intronic
CAediting_171312chr2_38334276_-ncRNA_intronic
CAediting_171313chr2_38334289_-ncRNA_intronic
CAediting_171314chr2_38334303_-ncRNA_intronic
CAediting_171315chr2_38334445_-ncRNA_intronic
CAediting_171316chr2_38334467_-ncRNA_intronic
CAediting_171317chr2_38334536_-ncRNA_intronic
CAediting_171318chr2_38334576_-ncRNA_intronic
CAediting_171319chr2_38334598_-ncRNA_intronic
CAediting_171320chr2_38334612_-ncRNA_intronic
CAediting_171321chr2_38334651_-ncRNA_intronic
CAediting_171322chr2_38334695_-ncRNA_intronic
CAediting_171323chr2_38335798_-ncRNA_intronic
CAediting_171324chr2_38335807_-ncRNA_intronic
CAediting_171325chr2_38335851_-ncRNA_intronic
CAediting_171326chr2_38335876_-ncRNA_intronic
CAediting_171327chr2_38335882_-ncRNA_intronic
CAediting_171328chr2_38335892_-ncRNA_intronic
CAediting_171329chr2_38335918_-ncRNA_intronic
CAediting_171330chr2_38336008_-ncRNA_intronic
CAediting_171331chr2_38337400_-ncRNA_intronic
CAediting_171332chr2_38338956_-ncRNA_intronic
CAediting_171333chr2_38338980_-ncRNA_intronic
CAediting_171334chr2_38339013_-ncRNA_intronic
CAediting_171335chr2_38339094_-ncRNA_intronic
CAediting_171336chr2_38339159_-ncRNA_intronic
CAediting_171337chr2_38339211_-ncRNA_intronic
CAediting_171338chr2_38339726_-ncRNA_intronic
CAediting_171339chr2_38339828_-ncRNA_intronic
CAediting_171340chr2_38339829_-ncRNA_intronic
CAediting_171341chr2_38339855_-ncRNA_intronic
CAediting_171342chr2_38339884_-ncRNA_intronic
CAediting_171343chr2_38339918_-ncRNA_intronic
CAediting_171344chr2_38343026_-ncRNA_intronic
CAediting_171345chr2_38343036_-ncRNA_intronic
CAediting_171346chr2_38343065_-ncRNA_intronic
CAediting_171347chr2_38343066_-ncRNA_intronic
CAediting_171348chr2_38343072_-ncRNA_intronic
CAediting_171349chr2_38343091_-ncRNA_intronic
CAediting_171350chr2_38343098_-ncRNA_intronic
CAediting_171351chr2_38343126_-ncRNA_intronic
CAediting_171352chr2_38347827_-ncRNA_intronic
CAediting_171353chr2_38347843_-ncRNA_intronic
CAediting_171354chr2_38347852_-ncRNA_intronic
CAediting_171355chr2_38347859_-ncRNA_intronic
CAediting_171356chr2_38347863_-ncRNA_intronic
CAediting_171357chr2_38347864_-ncRNA_intronic
CAediting_171358chr2_38347872_-ncRNA_intronic
CAediting_171359chr2_38347880_-ncRNA_intronic
CAediting_171360chr2_38347882_-ncRNA_intronic
CAediting_171361chr2_38347895_-ncRNA_intronic
CAediting_171362chr2_38347931_-ncRNA_intronic
CAediting_171363chr2_38347942_-ncRNA_intronic
CAediting_171364chr2_38347943_-ncRNA_intronic
CAediting_171365chr2_38347944_-ncRNA_intronic
CAediting_171366chr2_38347945_-ncRNA_intronic
CAediting_171367chr2_38347946_-ncRNA_intronic
CAediting_171368chr2_38347949_-ncRNA_intronic
CAediting_171369chr2_38347960_-ncRNA_intronic
CAediting_171370chr2_38347961_-ncRNA_intronic
CAediting_171371chr2_38347994_-ncRNA_intronic
CAediting_171372chr2_38348004_-ncRNA_intronic
CAediting_171373chr2_38348039_-ncRNA_intronic
CAediting_171374chr2_38348062_-ncRNA_intronic
CAediting_171375chr2_38348188_-ncRNA_intronic
CAediting_171376chr2_38348301_-ncRNA_intronic
CAediting_171377chr2_38348304_-ncRNA_intronic
CAediting_171378chr2_38348317_-ncRNA_intronic
CAediting_171379chr2_38348366_-ncRNA_intronic
CAediting_171380chr2_38348384_-ncRNA_intronic
CAediting_171381chr2_38348403_-ncRNA_intronic
CAediting_171382chr2_38351658_-ncRNA_intronic
CAediting_171383chr2_38351689_-ncRNA_intronic
CAediting_171384chr2_38351696_-ncRNA_intronic
CAediting_171385chr2_38351766_-ncRNA_intronic
CAediting_171386chr2_38351855_-ncRNA_intronic
CAediting_171387chr2_38354070_-exonic
CAediting_171388chr2_38354084_-exonic
CAediting_171389chr2_38354092_-exonic
CAediting_171390chr2_38354646_-ncRNA_intronic
CAediting_171391chr2_38354742_-ncRNA_intronic
CAediting_171392chr2_38354777_-ncRNA_intronic
CAediting_171393chr2_38354778_-ncRNA_intronic
CAediting_171394chr2_38354844_-ncRNA_intronic
CAediting_171395chr2_38355760_-ncRNA_intronic
CAediting_171396chr2_38355821_-ncRNA_intronic
CAediting_171397chr2_38355824_-ncRNA_intronic
CAediting_171398chr2_38355828_-ncRNA_intronic
CAediting_171399chr2_38355832_-ncRNA_intronic
CAediting_171400chr2_38355888_-ncRNA_intronic
CAediting_171401chr2_38355898_-ncRNA_intronic
CAediting_171402chr2_38355914_-ncRNA_intronic
CAediting_171403chr2_38356279_-ncRNA_intronic
CAediting_171404chr2_38356315_-ncRNA_intronic
CAediting_171405chr2_38356325_-ncRNA_intronic
CAediting_171406chr2_38356326_-ncRNA_intronic
CAediting_171407chr2_38356332_-ncRNA_intronic
CAediting_171408chr2_38356349_-ncRNA_intronic
CAediting_171409chr2_38356382_-ncRNA_intronic
CAediting_171410chr2_38356392_-ncRNA_intronic
CAediting_171411chr2_38356407_-ncRNA_intronic
CAediting_171412chr2_38356465_-ncRNA_intronic
CAediting_171413chr2_38357079_-ncRNA_intronic
CAediting_171414chr2_38357086_-ncRNA_intronic
CAediting_171415chr2_38358458_-ncRNA_exonic
CAediting_171416chr2_38360018_-ncRNA_intronic
CAediting_171417chr2_38360022_-ncRNA_intronic
CAediting_171418chr2_38360067_-ncRNA_intronic
CAediting_171419chr2_38360358_-ncRNA_intronic
CAediting_171420chr2_38360364_-ncRNA_intronic
CAediting_171421chr2_38360383_-ncRNA_intronic
CAediting_171422chr2_38360401_-ncRNA_intronic
CAediting_171423chr2_38360406_-ncRNA_intronic
CAediting_171424chr2_38360407_-ncRNA_intronic
CAediting_171425chr2_38360410_-ncRNA_intronic
CAediting_171426chr2_38360414_-ncRNA_intronic
CAediting_171427chr2_38360418_-ncRNA_intronic
CAediting_171428chr2_38360481_-ncRNA_intronic
CAediting_171429chr2_38360528_-ncRNA_intronic
CAediting_171430chr2_38360550_-ncRNA_intronic
CAediting_171431chr2_38367092_-ncRNA_intronic
CAediting_171432chr2_38367093_-ncRNA_intronic
CAediting_171433chr2_38367761_-ncRNA_intronic
CAediting_171434chr2_38367771_-ncRNA_intronic
CAediting_171435chr2_38367892_-ncRNA_intronic
CAediting_171436chr2_38368024_-ncRNA_intronic
CAediting_171437chr2_38368031_-ncRNA_intronic
CAediting_171438chr2_38368032_-ncRNA_intronic
CAediting_171439chr2_38368099_-ncRNA_intronic
CAediting_171440chr2_38368129_-ncRNA_intronic
CAediting_171441chr2_38368139_-ncRNA_intronic
CAediting_171442chr2_38368923_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_171150chr2_38300724_-SINEAluAluJo
CAediting_171151chr2_38300771_-SINEAluAluJo
CAediting_171152chr2_38301063_-SINEAluAluSp
CAediting_171153chr2_38301067_-SINEAluAluSp
CAediting_171154chr2_38301068_-SINEAluAluSp
CAediting_171155chr2_38301108_-SINEAluAluSp
CAediting_171156chr2_38301109_-SINEAluAluSp
CAediting_171157chr2_38301143_-SINEAluAluSp
CAediting_171158chr2_38301145_-SINEAluAluSp
CAediting_171159chr2_38301148_-SINEAluAluSp
CAediting_171160chr2_38301149_-SINEAluAluSp
CAediting_171161chr2_38301163_-SINEAluAluSp
CAediting_171162chr2_38301173_-SINEAluAluSp
CAediting_171163chr2_38301174_-SINEAluAluSp
CAediting_171164chr2_38301183_-SINEAluAluSp
CAediting_171165chr2_38301219_-SINEAluAluSp
CAediting_171166chr2_38301242_-SINEAluAluSp
CAediting_171167chr2_38301243_-SINEAluAluSp
CAediting_171168chr2_38301261_-SINEAluAluSp
CAediting_171169chr2_38301265_-SINEAluAluSp
CAediting_171170chr2_38303291_-SINEAluAluJb
CAediting_171171chr2_38303317_-SINEAluAluJb
CAediting_171172chr2_38303334_-SINEAluAluJb
CAediting_171173chr2_38303338_-SINEAluAluJb
CAediting_171174chr2_38303344_-SINEAluAluJb
CAediting_171175chr2_38303370_-SINEAluAluJb
CAediting_171176chr2_38303379_-SINEAluAluJb
CAediting_171177chr2_38303383_-SINEAluAluJb
CAediting_171178chr2_38303384_-SINEAluAluJb
CAediting_171179chr2_38303385_-SINEAluAluJb
CAediting_171180chr2_38303386_-SINEAluAluJb
CAediting_171181chr2_38303422_-SINEAluAluJb
CAediting_171182chr2_38303459_-SINEAluAluJb
CAediting_171183chr2_38303464_-SINEAluAluJb
CAediting_171184chr2_38303473_-SINEAluAluJb
CAediting_171185chr2_38303482_-SINEAluAluJb
CAediting_171186chr2_38303873_-SINEAluAluJo
CAediting_171187chr2_38303875_-SINEAluAluJo
CAediting_171188chr2_38303887_-SINEAluAluJo
CAediting_171189chr2_38303888_-SINEAluAluJo
CAediting_171190chr2_38303911_-SINEAluAluJo
CAediting_171191chr2_38303963_-SINEAluAluJo
CAediting_171192chr2_38303965_-SINEAluAluJo
CAediting_171193chr2_38303967_-SINEAluAluJo
CAediting_171194chr2_38304007_-SINEAluAluJo
CAediting_171195chr2_38304012_-SINEAluAluJo
CAediting_171196chr2_38304020_-SINEAluAluJo
CAediting_171197chr2_38304029_-SINEAluAluJo
CAediting_171198chr2_38304046_-SINEAluAluJo
CAediting_171199chr2_38304095_-LINEL1L1MA3
CAediting_171200chr2_38305284_-SINEAluAluSz
CAediting_171201chr2_38305303_-SINEAluAluSz
CAediting_171202chr2_38305345_-SINEAluAluSz
CAediting_171203chr2_38305356_-SINEAluAluSz
CAediting_171204chr2_38305365_-SINEAluAluSz
CAediting_171205chr2_38305385_-SINEAluAluSz
CAediting_171206chr2_38305427_-SINEAluAluSz
CAediting_171207chr2_38305503_-SINEAluAluSz
CAediting_171208chr2_38305542_-SINEAluAluSz
CAediting_171209chr2_38307186_-SINEAluAluSx
CAediting_171210chr2_38307201_-SINEAluAluSx
CAediting_171211chr2_38307236_-SINEAluAluSx
CAediting_171216chr2_38307297_-LINEL1L1M1
CAediting_171217chr2_38307298_-LINEL1L1M1
CAediting_171218chr2_38307313_-LINEL1L1M1
CAediting_171219chr2_38307330_-LINEL1L1M1
CAediting_171220chr2_38307337_-LINEL1L1M1
CAediting_171221chr2_38307338_-LINEL1L1M1
CAediting_171222chr2_38307348_-LINEL1L1M1
CAediting_171223chr2_38307350_-SINEAluAlu
CAediting_171224chr2_38307353_-SINEAluAlu
CAediting_171225chr2_38307354_-SINEAluAlu
CAediting_171226chr2_38307355_-SINEAluAlu
CAediting_171227chr2_38307356_-SINEAluAlu
CAediting_171228chr2_38307358_-SINEAluAlu
CAediting_171229chr2_38307360_-SINEAluAlu
CAediting_171230chr2_38307361_-SINEAluAlu
CAediting_171231chr2_38307363_-SINEAluAlu
CAediting_171232chr2_38307366_-SINEAluAlu
CAediting_171233chr2_38307477_-SINEAluAluSx
CAediting_171234chr2_38307495_-SINEAluAluSx
CAediting_171235chr2_38307496_-SINEAluAluSx
CAediting_171236chr2_38307497_-SINEAluAluSx
CAediting_171237chr2_38307533_-LINEL1L1MA3
CAediting_171238chr2_38307554_-LINEL1L1MA3
CAediting_171239chr2_38307569_-LINEL1L1MA3
CAediting_171240chr2_38307573_-LINEL1L1MA3
CAediting_171241chr2_38307581_-LINEL1L1MA3
CAediting_171242chr2_38310770_-SINEAluAluSp
CAediting_171243chr2_38310807_-SINEAluAluSp
CAediting_171244chr2_38310851_-SINEAluAluSp
CAediting_171245chr2_38319504_-SINEAluAluJb
CAediting_171246chr2_38320900_-SINEAluAluSz
CAediting_171247chr2_38321033_-SINEAluAluSz
CAediting_171248chr2_38321047_-SINEAluAluSz
CAediting_171249chr2_38321072_-SINEAluAluSz
CAediting_171250chr2_38321121_-SINEAluAluSz
CAediting_171251chr2_38321707_-SINEAluAluJb
CAediting_171252chr2_38321760_-SINEAluAluJb
CAediting_171253chr2_38321796_-SINEAluAluJb
CAediting_171254chr2_38321799_-SINEAluAluJb
CAediting_171255chr2_38321828_-SINEAluAluJb
CAediting_171256chr2_38321834_-SINEAluAluJb
CAediting_171257chr2_38321837_-SINEAluAluJb
CAediting_171258chr2_38321841_-SINEAluAluJb
CAediting_171259chr2_38321845_-SINEAluAluJb
CAediting_171260chr2_38321851_-SINEAluAluJb
CAediting_171261chr2_38321873_-SINEAluAluJb
CAediting_171262chr2_38321886_-SINEAluAluJb
CAediting_171263chr2_38321889_-SINEAluAluJb
CAediting_171264chr2_38321891_-SINEAluAluJb
CAediting_171265chr2_38321892_-SINEAluAluJb
CAediting_171266chr2_38321895_-SINEAluAluJb
CAediting_171267chr2_38323414_-SINEAluAluJo
CAediting_171268chr2_38323415_-SINEAluAluJo
CAediting_171269chr2_38323422_-SINEAluAluJo
CAediting_171270chr2_38323423_-SINEAluAluJo
CAediting_171271chr2_38323446_-SINEAluAluJo
CAediting_171272chr2_38323471_-SINEAluAluJo
CAediting_171273chr2_38323476_-SINEAluAluJo
CAediting_171274chr2_38323477_-SINEAluAluJo
CAediting_171275chr2_38323495_-SINEAluAluJo
CAediting_171276chr2_38326840_-SINEAluAluSz
CAediting_171277chr2_38327922_-SINEAluAluSx1
CAediting_171278chr2_38331052_-SINEAluAluSx
CAediting_171279chr2_38331292_-SINEAluAluSc
CAediting_171280chr2_38331324_-SINEAluAluSc
CAediting_171281chr2_38332299_-SINEAluAluJo
CAediting_171282chr2_38332304_-SINEAluAluJo
CAediting_171283chr2_38332322_-SINEAluAluJo
CAediting_171284chr2_38332323_-SINEAluAluJo
CAediting_171285chr2_38332331_-SINEAluAluJo
CAediting_171286chr2_38332335_-SINEAluAluJo
CAediting_171287chr2_38332339_-SINEAluAluJo
CAediting_171288chr2_38332345_-SINEAluAluJo
CAediting_171289chr2_38332366_-SINEAluAluJo
CAediting_171290chr2_38332374_-SINEAluAluJo
CAediting_171291chr2_38332957_-SINEAluFLAM_A
CAediting_171292chr2_38333142_-SINEAluAluJo
CAediting_171293chr2_38333289_-SINEAluAluJo
CAediting_171294chr2_38334095_-SINEAluAluSx1
CAediting_171295chr2_38334106_-SINEAluAluSx1
CAediting_171296chr2_38334115_-SINEAluAluSx1
CAediting_171297chr2_38334127_-SINEAluAluSx1
CAediting_171298chr2_38334138_-SINEAluAluSx1
CAediting_171299chr2_38334154_-SINEAluAluSx1
CAediting_171300chr2_38334162_-SINEAluAluSx1
CAediting_171301chr2_38334167_-SINEAluAluSx1
CAediting_171302chr2_38334168_-SINEAluAluSx1
CAediting_171303chr2_38334190_-SINEAluAluSx1
CAediting_171304chr2_38334194_-SINEAluAluSx1
CAediting_171305chr2_38334197_-SINEAluAluSx1
CAediting_171306chr2_38334206_-SINEAluAluSx1
CAediting_171307chr2_38334207_-SINEAluAluSx1
CAediting_171308chr2_38334208_-SINEAluAluSx1
CAediting_171309chr2_38334209_-SINEAluAluSx1
CAediting_171310chr2_38334223_-SINEAluAluSx1
CAediting_171311chr2_38334231_-SINEAluAluSx1
CAediting_171312chr2_38334276_-SINEAluAluSx1
CAediting_171313chr2_38334289_-SINEAluAluSx1
CAediting_171314chr2_38334303_-SINEAluAluSx1
CAediting_171315chr2_38334445_-SINEAluAluSp
CAediting_171316chr2_38334467_-SINEAluAluSp
CAediting_171317chr2_38334536_-SINEAluAluSp
CAediting_171318chr2_38334576_-SINEAluAluSp
CAediting_171319chr2_38334598_-SINEAluAluSp
CAediting_171320chr2_38334612_-SINEAluAluSp
CAediting_171321chr2_38334651_-SINEAluAluSp
CAediting_171322chr2_38334695_-SINEAluAluSp
CAediting_171323chr2_38335798_-SINEAluAluY
CAediting_171324chr2_38335807_-SINEAluAluY
CAediting_171325chr2_38335851_-SINEAluAluY
CAediting_171326chr2_38335876_-SINEAluAluY
CAediting_171327chr2_38335882_-SINEAluAluY
CAediting_171328chr2_38335892_-SINEAluAluY
CAediting_171329chr2_38335918_-SINEAluAluY
CAediting_171330chr2_38336008_-SINEAluAluY
CAediting_171331chr2_38337400_-SINEAluAluSz
CAediting_171332chr2_38338956_-SINEAluAluSq
CAediting_171333chr2_38338980_-SINEAluAluSq
CAediting_171334chr2_38339013_-SINEAluAluSq
CAediting_171335chr2_38339094_-SINEAluAluSq
CAediting_171336chr2_38339159_-SINEAluAluSq
CAediting_171337chr2_38339211_-SINEAluAluSq
CAediting_171338chr2_38339726_-SINEAluAluSq2
CAediting_171339chr2_38339828_-SINEAluAluSq2
CAediting_171340chr2_38339829_-SINEAluAluSq2
CAediting_171341chr2_38339855_-SINEAluAluSq2
CAediting_171342chr2_38339884_-SINEAluAluSq2
CAediting_171343chr2_38339918_-SINEAluAluSq2
CAediting_171344chr2_38343026_-SINEAluAluJb
CAediting_171345chr2_38343036_-SINEAluAluJb
CAediting_171346chr2_38343065_-SINEAluAluJb
CAediting_171347chr2_38343066_-SINEAluAluJb
CAediting_171348chr2_38343072_-SINEAluAluJb
CAediting_171349chr2_38343091_-SINEAluAluJb
CAediting_171350chr2_38343098_-SINEAluAluJb
CAediting_171351chr2_38343126_-SINEAluAluJb
CAediting_171352chr2_38347827_-SINEAluAluSx1
CAediting_171353chr2_38347843_-SINEAluAluSx1
CAediting_171354chr2_38347852_-SINEAluAluSx1
CAediting_171355chr2_38347859_-SINEAluAluSx1
CAediting_171356chr2_38347863_-SINEAluAluSx1
CAediting_171357chr2_38347864_-SINEAluAluSx1
CAediting_171358chr2_38347872_-SINEAluAluSx1
CAediting_171359chr2_38347880_-SINEAluAluSx1
CAediting_171360chr2_38347882_-SINEAluAluSx1
CAediting_171361chr2_38347895_-SINEAluAluSx1
CAediting_171362chr2_38347931_-SINEAluAluSx1
CAediting_171363chr2_38347942_-SINEAluAluSx1
CAediting_171364chr2_38347943_-SINEAluAluSx1
CAediting_171365chr2_38347944_-SINEAluAluSx1
CAediting_171366chr2_38347945_-SINEAluAluSx1
CAediting_171367chr2_38347946_-SINEAluAluSx1
CAediting_171368chr2_38347949_-SINEAluAluSx1
CAediting_171369chr2_38347960_-SINEAluAluSx1
CAediting_171370chr2_38347961_-SINEAluAluSx1
CAediting_171371chr2_38347994_-SINEAluAluSx1
CAediting_171372chr2_38348004_-SINEAluAluSx1
CAediting_171373chr2_38348039_-SINEAluAluSx1
CAediting_171374chr2_38348062_-SINEAluAluSx1
CAediting_171375chr2_38348188_-SINEAluAluSp
CAediting_171376chr2_38348301_-SINEAluAluSp
CAediting_171377chr2_38348304_-SINEAluAluSp
CAediting_171378chr2_38348317_-SINEAluAluSp
CAediting_171379chr2_38348366_-SINEAluAluSp
CAediting_171380chr2_38348384_-SINEAluAluSp
CAediting_171381chr2_38348403_-SINEAluAluSp
CAediting_171382chr2_38351658_-SINEAluAluSx1
CAediting_171383chr2_38351689_-SINEAluAluSx1
CAediting_171384chr2_38351696_-SINEAluAluSx1
CAediting_171385chr2_38351766_-SINEAluAluSx1
CAediting_171386chr2_38351855_-SINEAluAluSx1
CAediting_171387chr2_38354070_-SINEAluAluSc8
CAediting_171388chr2_38354084_-SINEAluAluSc8
CAediting_171389chr2_38354092_-SINEAluAluSc8
CAediting_171390chr2_38354646_-SINEAluAluSp
CAediting_171391chr2_38354742_-SINEAluAluSp
CAediting_171392chr2_38354777_-SINEAluAluSp
CAediting_171393chr2_38354778_-SINEAluAluSp
CAediting_171394chr2_38354844_-SINEAluAluSp
CAediting_171395chr2_38355760_-SINEAluAluSz
CAediting_171396chr2_38355821_-SINEAluAluSz
CAediting_171397chr2_38355824_-SINEAluAluSz
CAediting_171398chr2_38355828_-SINEAluAluSz
CAediting_171399chr2_38355832_-SINEAluAluSz
CAediting_171400chr2_38355888_-SINEAluAluSz
CAediting_171401chr2_38355898_-SINEAluAluSz
CAediting_171402chr2_38355914_-SINEAluAluSz
CAediting_171403chr2_38356279_-SINEAluAluJb
CAediting_171404chr2_38356315_-SINEAluAluJb
CAediting_171405chr2_38356325_-SINEAluAluJb
CAediting_171406chr2_38356326_-SINEAluAluJb
CAediting_171407chr2_38356332_-SINEAluAluJb
CAediting_171408chr2_38356349_-SINEAluAluJb
CAediting_171409chr2_38356382_-SINEAluAluJb
CAediting_171410chr2_38356392_-SINEAluAluJb
CAediting_171411chr2_38356407_-SINEAluAluJb
CAediting_171412chr2_38356465_-SINEAluAluJb
CAediting_171413chr2_38357079_-SINEAluAluSc5
CAediting_171414chr2_38357086_-SINEAluAluSc5
CAediting_171415chr2_38358458_-SINEAluAluYc
CAediting_171416chr2_38360018_-SINEAluAluSx1
CAediting_171417chr2_38360022_-SINEAluAluSx1
CAediting_171418chr2_38360067_-SINEAluAluSx1
CAediting_171419chr2_38360358_-SINEAluAluJb
CAediting_171420chr2_38360364_-SINEAluAluJb
CAediting_171421chr2_38360383_-SINEAluAluJb
CAediting_171422chr2_38360401_-SINEAluAluJb
CAediting_171423chr2_38360406_-SINEAluAluJb
CAediting_171424chr2_38360407_-SINEAluAluJb
CAediting_171425chr2_38360410_-SINEAluAluJb
CAediting_171426chr2_38360414_-SINEAluAluJb
CAediting_171427chr2_38360418_-SINEAluAluJb
CAediting_171428chr2_38360481_-SINEAluAluJb
CAediting_171429chr2_38360528_-SINEAluAluJb
CAediting_171430chr2_38360550_-SINEAluAluJb
CAediting_171431chr2_38367092_-SINEAluFLAM_C
CAediting_171432chr2_38367093_-SINEAluFLAM_C
CAediting_171433chr2_38367761_-SINEAluAluSq2
CAediting_171434chr2_38367771_-SINEAluAluSq2
CAediting_171435chr2_38367892_-SINEAluAluSq2
CAediting_171436chr2_38368024_-SINEAluAluY
CAediting_171437chr2_38368031_-SINEAluAluY
CAediting_171438chr2_38368032_-SINEAluAluY
CAediting_171439chr2_38368099_-SINEAluAluY
CAediting_171440chr2_38368129_-SINEAluAluY
CAediting_171441chr2_38368139_-SINEAluAluY
CAediting_171442chr2_38368923_-SINEAluFLAM_C

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RNA A-to-I editing events in the alternative splicing sites for ATL2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000119787.12.ATL2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000119787.12.ATL2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ATL2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
ESCA.CAediting_171259.ENSG00000119787.ATL2.png
Soverview

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Protein coding region RNA A-to-I editings for ATL2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for ATL2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_171415chr2_38358458_-ENSG00000119787.12ENST00000416222hsa-miR-3189-3p38358457383584637mer-m83835845638358478145.00-20.15
CAediting_171415chr2_38358458_-ENSG00000119787.12ENST00000416222hsa-miR-6813-3p38358456383584627mer-m83835845538358475140.00-15.63

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_228905chr2_188297554_+ENSG00000119787.12ENST00000406122hsa-miR-561-3p38296050382960578mer-1a3829605038296077143-13.92
CAediting_1229414chr17_67471546_+ENSG00000119787.12ENST00000405384hsa-miR-548aa38310348383103558mer-1a3831034838310372144-8.12
CAediting_228905chr2_188297554_+ENSG00000119787.12ENST00000405384hsa-miR-561-3p38298278382982858mer-1a3829827838298298158-18.03
CAediting_228905chr2_188297554_+ENSG00000119787.12ENST00000405384hsa-miR-561-3p38296050382960578mer-1a3829605038296077143-13.92
CAediting_228905chr2_188297554_+ENSG00000119787.12ENST00000419554hsa-miR-561-3p38296050382960578mer-1a3829605038296077143-13.92

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000119787.12ENST00000406122hsa-miR-200b-3p38295505382955128mer-1a3829550538295522146-11.29

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ATL2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000451483.1protein_codingSoverviewSoverview
ENST00000456736.4nonsense_mediated_decaySoverviewSoverview
ENST00000416222.1nonsense_mediated_decaySoverviewSoverview
ENST00000486927.1processed_transcriptSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_171387ENST00000451483.1chr2_38354070_--180.40-179.00-180.40
CAediting_171388ENST00000451483.1chr2_38354084_--178.30-179.00-180.40
CAediting_171389ENST00000451483.1chr2_38354092_--179.10-179.00-180.40
CAediting_171387ENST00000456736.4chr2_38354070_--182.00-179.00-183.90
CAediting_171388ENST00000456736.4chr2_38354084_--179.10-179.00-183.90
CAediting_171389ENST00000456736.4chr2_38354092_--179.10-179.00-183.90
CAediting_171415ENST00000416222.1chr2_38358458_--225.90-219.30-225.90
CAediting_171415ENST00000486927.1chr2_38358458_--187.70-181.10-187.70

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Relation with ADAR for ATL2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for ATL2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for ATL2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for ATL2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for ATL2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource