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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: NSUN3 (CAeditome ID:63899)

Gene summary for NSUN3

check button Gene summary
Gene informationGene symbol

NSUN3

Gene ID

63899

Gene nameNOP2/Sun RNA methyltransferase 3
SynonymsCOXPD48|MST077|MSTP077
Cytomap

3q11.2

Type of geneprotein-coding
DescriptiontRNA (cytosine(34)-C(5))-methyltransferase, mitochondrialNOL1/NOP2/Sun domain family member 3NOP2/Sun RNA methyltransferase family member 3putative methyltransferase NSUN3
Modification date20210518
UniProtAcc

Q9H649

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
NSUN3

GO:0016428

tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial

27214402

NSUN3

GO:0016428

tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial

27356879

NSUN3

GO:0016428

tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial

27497299

NSUN3

GO:0002127

tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial

27214402

NSUN3

GO:0002127

tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial

27356879

NSUN3

GO:0002127

tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial

27497299

NSUN3

GO:0005739

tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial

27214402

NSUN3

GO:0005739

tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial

27356879

NSUN3

GO:0005759

tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial

27497299


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RNA A-to-I events for NSUN3

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000178694.8
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_297522(94063902, +), CAediting_297523(94063948, +), CAediting_297524(94063949, +), CAediting_297525(94064069, +), CAediting_297526(94085542, +), CAediting_297527(94085638, +), CAediting_297528(94085660, +), CAediting_297529(94085661, +), CAediting_297530(94085665, +), CAediting_297531(94086013, +), CAediting_297532(94086061, +), CAediting_297533(94086083, +), CAediting_297534(94086179, +), CAediting_297535(94087690, +), CAediting_297536(94087694, +), CAediting_297537(94087695, +), CAediting_297538(94087770, +), CAediting_297539(94087771, +), CAediting_297540(94087929, +), CAediting_297541(94088773, +), CAediting_297542(94088783, +), CAediting_297543(94088790, +), CAediting_297544(94089884, +), CAediting_297545(94089892, +), CAediting_297546(94089900, +), CAediting_297547(94089909, +), CAediting_297548(94089917, +), CAediting_297549(94089925, +), CAediting_297550(94089935, +), CAediting_297551(94089936, +), CAediting_297552(94089944, +), CAediting_297553(94089947, +), CAediting_297554(94089965, +), CAediting_297555(94089974, +), CAediting_297556(94089976, +), CAediting_297557(94091029, +), CAediting_297558(94091031, +), CAediting_297559(94091032, +), CAediting_297560(94091041, +), CAediting_297561(94091046, +), CAediting_297562(94091058, +), CAediting_297563(94091061, +), CAediting_297564(94091062, +), CAediting_297565(94091063, +), CAediting_297566(94091064, +), CAediting_297567(94091070, +), CAediting_297568(94091080, +), CAediting_297569(94091081, +), CAediting_297570(94091082, +), CAediting_297571(94091098, +), CAediting_297572(94091101, +), CAediting_297573(94091102, +), CAediting_297574(94092630, +), CAediting_297575(94092648, +), CAediting_297576(94092654, +), CAediting_297577(94092667, +), CAediting_297578(94092675, +), CAediting_297579(94092679, +), CAediting_297580(94092684, +), CAediting_297581(94092689, +), CAediting_297582(94092694, +), CAediting_297583(94092705, +), CAediting_297584(94092708, +), CAediting_297585(94092718, +), CAediting_297586(94092720, +), CAediting_297587(94092726, +), CAediting_297588(94092727, +), CAediting_297589(94092728, +), CAediting_297590(94092745, +), CAediting_297591(94092761, +), CAediting_297592(94092762, +), CAediting_297593(94092767, +), CAediting_297594(94092768, +), CAediting_297595(94092773, +), CAediting_297596(94092793, +), CAediting_297597(94092799, +), CAediting_297598(94092800, +), CAediting_297599(94092809, +), CAediting_297600(94092816, +), CAediting_297601(94092826, +), CAediting_297602(94092831, +), CAediting_297603(94092832, +), CAediting_297604(94092840, +), CAediting_297605(94092841, +), CAediting_297606(94092854, +), CAediting_297607(94092861, +), CAediting_297608(94092865, +), CAediting_297609(94092875, +), CAediting_297610(94092884, +), CAediting_297611(94092890, +), CAediting_297612(94092899, +), CAediting_297613(94092902, +), CAediting_297614(94112610, +), CAediting_297615(94127943, +), CAediting_297616(94127947, +), CAediting_297617(94127966, +), CAediting_297618(94127971, +), CAediting_297619(94127974, +), CAediting_297620(94127988, +), CAediting_297621(94127992, +), CAediting_297622(94128007, +), CAediting_297623(94128012, +), CAediting_297624(94128014, +), CAediting_297625(94128015, +), CAediting_297626(94128023, +), CAediting_297627(94128038, +), CAediting_297628(94128043, +), CAediting_297629(94128044, +), CAediting_297630(94128045, +), CAediting_297631(94128046, +), CAediting_297632(94128057, +), CAediting_297633(94128061, +), CAediting_297634(94128062, +), CAediting_297635(94128063, +), CAediting_297636(94128064, +), CAediting_297637(94128069, +), CAediting_297638(94128070, +), CAediting_297639(94128071, +), CAediting_297640(94128072, +), CAediting_297641(94128073, +), CAediting_297642(94128074, +), CAediting_297643(94128077, +), CAediting_297644(94128079, +), CAediting_297645(94128097, +), CAediting_297646(94128100, +), CAediting_297647(94128103, +), CAediting_297648(94128104, +), CAediting_297649(94128109, +), CAediting_297650(94128113, +), CAediting_297651(94128117, +), CAediting_297652(94128126, +), CAediting_297653(94128130, +), CAediting_297654(94128135, +), CAediting_297655(94128139, +), CAediting_297656(94128144, +), CAediting_297657(94128145, +), CAediting_297658(94128149, +), CAediting_297659(94128156, +), CAediting_297660(94128165, +), CAediting_297661(94128169, +), CAediting_297662(94128173, +), CAediting_297663(94128174, +), CAediting_297664(94128176, +),

Top

RNA editing positional annotations for NSUN3 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_297522chr3_94063902_+ncRNA_exonic
CAediting_297523chr3_94063948_+ncRNA_exonic
CAediting_297524chr3_94063949_+ncRNA_exonic
CAediting_297525chr3_94064069_+ncRNA_exonic
CAediting_297526chr3_94085542_+intronic
CAediting_297527chr3_94085638_+intronic
CAediting_297528chr3_94085660_+intronic
CAediting_297529chr3_94085661_+intronic
CAediting_297530chr3_94085665_+intronic
CAediting_297531chr3_94086013_+intronic
CAediting_297532chr3_94086061_+intronic
CAediting_297533chr3_94086083_+intronic
CAediting_297534chr3_94086179_+intronic
CAediting_297535chr3_94087690_+intronic
CAediting_297536chr3_94087694_+intronic
CAediting_297537chr3_94087695_+intronic
CAediting_297538chr3_94087770_+intronic
CAediting_297539chr3_94087771_+intronic
CAediting_297540chr3_94087929_+intronic
CAediting_297541chr3_94088773_+intronic
CAediting_297542chr3_94088783_+intronic
CAediting_297543chr3_94088790_+intronic
CAediting_297544chr3_94089884_+intronic
CAediting_297545chr3_94089892_+intronic
CAediting_297546chr3_94089900_+intronic
CAediting_297547chr3_94089909_+intronic
CAediting_297548chr3_94089917_+intronic
CAediting_297549chr3_94089925_+intronic
CAediting_297550chr3_94089935_+intronic
CAediting_297551chr3_94089936_+intronic
CAediting_297552chr3_94089944_+intronic
CAediting_297553chr3_94089947_+intronic
CAediting_297554chr3_94089965_+intronic
CAediting_297555chr3_94089974_+intronic
CAediting_297556chr3_94089976_+intronic
CAediting_297557chr3_94091029_+intronic
CAediting_297558chr3_94091031_+intronic
CAediting_297559chr3_94091032_+intronic
CAediting_297560chr3_94091041_+intronic
CAediting_297561chr3_94091046_+intronic
CAediting_297562chr3_94091058_+intronic
CAediting_297563chr3_94091061_+intronic
CAediting_297564chr3_94091062_+intronic
CAediting_297565chr3_94091063_+intronic
CAediting_297566chr3_94091064_+intronic
CAediting_297567chr3_94091070_+intronic
CAediting_297568chr3_94091080_+intronic
CAediting_297569chr3_94091081_+intronic
CAediting_297570chr3_94091082_+intronic
CAediting_297571chr3_94091098_+intronic
CAediting_297572chr3_94091101_+intronic
CAediting_297573chr3_94091102_+intronic
CAediting_297574chr3_94092630_+intronic
CAediting_297575chr3_94092648_+intronic
CAediting_297576chr3_94092654_+intronic
CAediting_297577chr3_94092667_+intronic
CAediting_297578chr3_94092675_+intronic
CAediting_297579chr3_94092679_+intronic
CAediting_297580chr3_94092684_+intronic
CAediting_297581chr3_94092689_+intronic
CAediting_297582chr3_94092694_+intronic
CAediting_297583chr3_94092705_+intronic
CAediting_297584chr3_94092708_+intronic
CAediting_297585chr3_94092718_+intronic
CAediting_297586chr3_94092720_+intronic
CAediting_297587chr3_94092726_+intronic
CAediting_297588chr3_94092727_+intronic
CAediting_297589chr3_94092728_+intronic
CAediting_297590chr3_94092745_+intronic
CAediting_297591chr3_94092761_+intronic
CAediting_297592chr3_94092762_+intronic
CAediting_297593chr3_94092767_+intronic
CAediting_297594chr3_94092768_+intronic
CAediting_297595chr3_94092773_+intronic
CAediting_297596chr3_94092793_+intronic
CAediting_297597chr3_94092799_+intronic
CAediting_297598chr3_94092800_+intronic
CAediting_297599chr3_94092809_+intronic
CAediting_297600chr3_94092816_+intronic
CAediting_297601chr3_94092826_+intronic
CAediting_297602chr3_94092831_+intronic
CAediting_297603chr3_94092832_+intronic
CAediting_297604chr3_94092840_+intronic
CAediting_297605chr3_94092841_+intronic
CAediting_297606chr3_94092854_+intronic
CAediting_297607chr3_94092861_+intronic
CAediting_297608chr3_94092865_+intronic
CAediting_297609chr3_94092875_+intronic
CAediting_297610chr3_94092884_+intronic
CAediting_297611chr3_94092890_+intronic
CAediting_297612chr3_94092899_+intronic
CAediting_297613chr3_94092902_+intronic
CAediting_297614chr3_94112610_+intronic
CAediting_297615chr3_94127943_+UTR3
CAediting_297616chr3_94127947_+UTR3
CAediting_297617chr3_94127966_+UTR3
CAediting_297618chr3_94127971_+UTR3
CAediting_297619chr3_94127974_+UTR3
CAediting_297620chr3_94127988_+UTR3
CAediting_297621chr3_94127992_+UTR3
CAediting_297622chr3_94128007_+UTR3
CAediting_297623chr3_94128012_+UTR3
CAediting_297624chr3_94128014_+UTR3
CAediting_297625chr3_94128015_+UTR3
CAediting_297626chr3_94128023_+UTR3
CAediting_297627chr3_94128038_+UTR3
CAediting_297628chr3_94128043_+UTR3
CAediting_297629chr3_94128044_+UTR3
CAediting_297630chr3_94128045_+UTR3
CAediting_297631chr3_94128046_+UTR3
CAediting_297632chr3_94128057_+UTR3
CAediting_297633chr3_94128061_+UTR3
CAediting_297634chr3_94128062_+UTR3
CAediting_297635chr3_94128063_+UTR3
CAediting_297636chr3_94128064_+UTR3
CAediting_297637chr3_94128069_+UTR3
CAediting_297638chr3_94128070_+UTR3
CAediting_297639chr3_94128071_+UTR3
CAediting_297640chr3_94128072_+UTR3
CAediting_297641chr3_94128073_+UTR3
CAediting_297642chr3_94128074_+UTR3
CAediting_297643chr3_94128077_+UTR3
CAediting_297644chr3_94128079_+UTR3
CAediting_297645chr3_94128097_+UTR3
CAediting_297646chr3_94128100_+UTR3
CAediting_297647chr3_94128103_+UTR3
CAediting_297648chr3_94128104_+UTR3
CAediting_297649chr3_94128109_+UTR3
CAediting_297650chr3_94128113_+UTR3
CAediting_297651chr3_94128117_+UTR3
CAediting_297652chr3_94128126_+UTR3
CAediting_297653chr3_94128130_+UTR3
CAediting_297654chr3_94128135_+UTR3
CAediting_297655chr3_94128139_+UTR3
CAediting_297656chr3_94128144_+UTR3
CAediting_297657chr3_94128145_+UTR3
CAediting_297658chr3_94128149_+UTR3
CAediting_297659chr3_94128156_+UTR3
CAediting_297660chr3_94128165_+UTR3
CAediting_297661chr3_94128169_+UTR3
CAediting_297662chr3_94128173_+UTR3
CAediting_297663chr3_94128174_+UTR3
CAediting_297664chr3_94128176_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_297522chr3_94063902_+SINEAluAluSx1
CAediting_297523chr3_94063948_+SINEAluAluSx1
CAediting_297524chr3_94063949_+SINEAluAluSx1
CAediting_297525chr3_94064069_+SINEAluAluSx1
CAediting_297526chr3_94085542_+SINEAluAluJb
CAediting_297527chr3_94085638_+SINEAluAluJb
CAediting_297528chr3_94085660_+SINEAluAluJb
CAediting_297529chr3_94085661_+SINEAluAluJb
CAediting_297530chr3_94085665_+SINEAluAluJb
CAediting_297531chr3_94086013_+SINEAluAluSx1
CAediting_297532chr3_94086061_+SINEAluAluSx1
CAediting_297533chr3_94086083_+SINEAluAluSx1
CAediting_297534chr3_94086179_+SINEAluAluSx1
CAediting_297535chr3_94087690_+SINEAluAluJb
CAediting_297536chr3_94087694_+SINEAluAluJb
CAediting_297537chr3_94087695_+SINEAluAluJb
CAediting_297538chr3_94087770_+SINEAluAluJb
CAediting_297539chr3_94087771_+SINEAluAluJb
CAediting_297540chr3_94087929_+SINEAluAluJb
CAediting_297541chr3_94088773_+SINEAluAluSx
CAediting_297542chr3_94088783_+SINEAluAluSx
CAediting_297543chr3_94088790_+SINEAluAluSx
CAediting_297544chr3_94089884_+LTRERV1MER50
CAediting_297545chr3_94089892_+LTRERV1MER50
CAediting_297546chr3_94089900_+LTRERV1MER50
CAediting_297547chr3_94089909_+LTRERV1MER50
CAediting_297548chr3_94089917_+LTRERV1MER50
CAediting_297549chr3_94089925_+LTRERV1MER50
CAediting_297568chr3_94091080_+LTRERV1MER50B
CAediting_297569chr3_94091081_+LTRERV1MER50B
CAediting_297570chr3_94091082_+LTRERV1MER50B
CAediting_297571chr3_94091098_+LTRERV1MER50B
CAediting_297572chr3_94091101_+LTRERV1MER50B
CAediting_297573chr3_94091102_+LTRERV1MER50B
CAediting_297574chr3_94092630_+SINEAluAluSx
CAediting_297575chr3_94092648_+SINEAluAluSx
CAediting_297576chr3_94092654_+SINEAluAluSx
CAediting_297577chr3_94092667_+SINEAluAluSx
CAediting_297578chr3_94092675_+SINEAluAluSx
CAediting_297579chr3_94092679_+SINEAluAluSx
CAediting_297580chr3_94092684_+SINEAluAluSx
CAediting_297581chr3_94092689_+SINEAluAluSx
CAediting_297582chr3_94092694_+SINEAluAluSx
CAediting_297583chr3_94092705_+SINEAluAluSx
CAediting_297584chr3_94092708_+SINEAluAluSx
CAediting_297585chr3_94092718_+SINEAluAluSx
CAediting_297586chr3_94092720_+SINEAluAluSx
CAediting_297587chr3_94092726_+SINEAluAluSx
CAediting_297588chr3_94092727_+SINEAluAluSx
CAediting_297589chr3_94092728_+SINEAluAluSx
CAediting_297590chr3_94092745_+SINEAluAluSx
CAediting_297591chr3_94092761_+SINEAluAluSx
CAediting_297592chr3_94092762_+SINEAluAluSx
CAediting_297593chr3_94092767_+SINEAluAluSx
CAediting_297594chr3_94092768_+SINEAluAluSx
CAediting_297595chr3_94092773_+SINEAluAluSx
CAediting_297596chr3_94092793_+SINEAluAluSx
CAediting_297597chr3_94092799_+SINEAluAluSx
CAediting_297598chr3_94092800_+SINEAluAluSx
CAediting_297599chr3_94092809_+SINEAluAluSx
CAediting_297600chr3_94092816_+SINEAluAluSx
CAediting_297601chr3_94092826_+SINEAluAluSx
CAediting_297602chr3_94092831_+SINEAluAluSx
CAediting_297603chr3_94092832_+SINEAluAluSx
CAediting_297604chr3_94092840_+SINEAluAluSx
CAediting_297605chr3_94092841_+SINEAluAluSx
CAediting_297606chr3_94092854_+SINEAluAluSx
CAediting_297607chr3_94092861_+SINEAluAluSx
CAediting_297608chr3_94092865_+SINEAluAluSx
CAediting_297609chr3_94092875_+SINEAluAluSx
CAediting_297610chr3_94092884_+SINEAluAluSx
CAediting_297611chr3_94092890_+SINEAluAluSx
CAediting_297612chr3_94092899_+SINEAluAluSx
CAediting_297613chr3_94092902_+SINEAluAluSx
CAediting_297615chr3_94127943_+SINEAluAluSq2
CAediting_297616chr3_94127947_+SINEAluAluSq2
CAediting_297617chr3_94127966_+SINEAluAluSq2
CAediting_297618chr3_94127971_+SINEAluAluSq2
CAediting_297619chr3_94127974_+SINEAluAluSq2
CAediting_297620chr3_94127988_+SINEAluAluSq2
CAediting_297621chr3_94127992_+SINEAluAluSq2
CAediting_297622chr3_94128007_+SINEAluAluSq2
CAediting_297623chr3_94128012_+SINEAluAluSq2
CAediting_297624chr3_94128014_+SINEAluAluSq2
CAediting_297625chr3_94128015_+SINEAluAluSq2
CAediting_297626chr3_94128023_+SINEAluAluSq2
CAediting_297627chr3_94128038_+SINEAluAluSq2
CAediting_297628chr3_94128043_+SINEAluAluSq2
CAediting_297629chr3_94128044_+SINEAluAluSq2
CAediting_297630chr3_94128045_+SINEAluAluSq2
CAediting_297631chr3_94128046_+SINEAluAluSq2
CAediting_297632chr3_94128057_+SINEAluAluSq2
CAediting_297633chr3_94128061_+SINEAluAluSq2
CAediting_297634chr3_94128062_+SINEAluAluSq2
CAediting_297635chr3_94128063_+SINEAluAluSq2
CAediting_297636chr3_94128064_+SINEAluAluSq2
CAediting_297637chr3_94128069_+SINEAluAluSq2
CAediting_297638chr3_94128070_+SINEAluAluSq2
CAediting_297639chr3_94128071_+SINEAluAluSq2
CAediting_297640chr3_94128072_+SINEAluAluSq2
CAediting_297641chr3_94128073_+SINEAluAluSq2
CAediting_297642chr3_94128074_+SINEAluAluSq2
CAediting_297643chr3_94128077_+SINEAluAluSq2
CAediting_297644chr3_94128079_+SINEAluAluSq2
CAediting_297645chr3_94128097_+SINEAluAluSq2
CAediting_297646chr3_94128100_+SINEAluAluSq2
CAediting_297647chr3_94128103_+SINEAluAluSq2
CAediting_297648chr3_94128104_+SINEAluAluSq2
CAediting_297649chr3_94128109_+SINEAluAluSq2
CAediting_297650chr3_94128113_+SINEAluAluSq2
CAediting_297651chr3_94128117_+SINEAluAluSq2
CAediting_297652chr3_94128126_+SINEAluAluSq2
CAediting_297653chr3_94128130_+SINEAluAluSq2
CAediting_297654chr3_94128135_+SINEAluAluSq2
CAediting_297655chr3_94128139_+SINEAluAluSq2
CAediting_297656chr3_94128144_+SINEAluAluSq2
CAediting_297657chr3_94128145_+SINEAluAluSq2
CAediting_297658chr3_94128149_+SINEAluAluSq2
CAediting_297659chr3_94128156_+SINEAluAluSq2
CAediting_297660chr3_94128165_+SINEAluAluSq2
CAediting_297661chr3_94128169_+SINEAluAluSq2
CAediting_297662chr3_94128173_+SINEAluAluSq2
CAediting_297663chr3_94128174_+SINEAluAluSq2
CAediting_297664chr3_94128176_+SINEAluAluSq2

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RNA A-to-I editing events in the alternative splicing sites for NSUN3

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000178694.8.NSUN3.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000178694.8.NSUN3.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NSUN3

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
COAD.CAediting_297662.ENSG00000178694.NSUN3.png
Soverview

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Protein coding region RNA A-to-I editings for NSUN3

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for NSUN3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for NSUN3

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000314622.7protein_codingSoverviewSoverview
ENST00000461625.1processed_transcriptSoverviewSoverview
ENST00000468555.1processed_transcriptSoverviewSoverview
ENST00000477077.1processed_transcriptSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_297615ENST00000314622.7chr3_94127943_+-832.50-832.70-894.00
CAediting_297616ENST00000314622.7chr3_94127947_+-832.60-832.70-894.00
CAediting_297617ENST00000314622.7chr3_94127966_+-832.30-832.70-894.00
CAediting_297618ENST00000314622.7chr3_94127971_+-834.10-832.70-894.00
CAediting_297619ENST00000314622.7chr3_94127974_+-832.30-832.70-894.00
CAediting_297620ENST00000314622.7chr3_94127988_+-832.70-832.70-894.00
CAediting_297621ENST00000314622.7chr3_94127992_+-833.10-832.70-894.00
CAediting_297622ENST00000314622.7chr3_94128007_+-836.20-832.70-894.00
CAediting_297623ENST00000314622.7chr3_94128012_+-832.80-832.70-894.00
CAediting_297624ENST00000314622.7chr3_94128014_+-834.10-832.70-894.00
CAediting_297625ENST00000314622.7chr3_94128015_+-834.60-832.70-894.00
CAediting_297626ENST00000314622.7chr3_94128023_+-834.10-832.70-894.00
CAediting_297627ENST00000314622.7chr3_94128038_+-834.80-832.70-894.00
CAediting_297628ENST00000314622.7chr3_94128043_+-832.80-832.70-894.00
CAediting_297629ENST00000314622.7chr3_94128044_+-837.80-832.70-894.00
CAediting_297630ENST00000314622.7chr3_94128045_+-833.20-832.70-894.00
CAediting_297631ENST00000314622.7chr3_94128046_+-835.60-832.70-894.00
CAediting_297632ENST00000314622.7chr3_94128057_+-835.80-832.70-894.00
CAediting_297633ENST00000314622.7chr3_94128061_+-832.70-832.70-894.00
CAediting_297634ENST00000314622.7chr3_94128062_+-832.70-832.70-894.00
CAediting_297635ENST00000314622.7chr3_94128063_+-832.90-832.70-894.00
CAediting_297636ENST00000314622.7chr3_94128064_+-836.20-832.70-894.00
CAediting_297637ENST00000314622.7chr3_94128069_+-832.70-832.70-894.00
CAediting_297638ENST00000314622.7chr3_94128070_+-832.70-832.70-894.00
CAediting_297639ENST00000314622.7chr3_94128071_+-832.70-832.70-894.00
CAediting_297640ENST00000314622.7chr3_94128072_+-832.70-832.70-894.00
CAediting_297641ENST00000314622.7chr3_94128073_+-832.70-832.70-894.00
CAediting_297642ENST00000314622.7chr3_94128074_+-832.90-832.70-894.00
CAediting_297643ENST00000314622.7chr3_94128077_+-834.64-832.70-894.00
CAediting_297644ENST00000314622.7chr3_94128079_+-836.14-832.70-894.00
CAediting_297645ENST00000314622.7chr3_94128097_+-833.30-832.70-894.00
CAediting_297646ENST00000314622.7chr3_94128100_+-832.70-832.70-894.00
CAediting_297647ENST00000314622.7chr3_94128103_+-834.00-832.70-894.00
CAediting_297648ENST00000314622.7chr3_94128104_+-835.20-832.70-894.00
CAediting_297649ENST00000314622.7chr3_94128109_+-832.00-832.70-894.00
CAediting_297650ENST00000314622.7chr3_94128113_+-832.60-832.70-894.00
CAediting_297651ENST00000314622.7chr3_94128117_+-836.10-832.70-894.00
CAediting_297652ENST00000314622.7chr3_94128126_+-835.90-832.70-894.00
CAediting_297653ENST00000314622.7chr3_94128130_+-835.20-832.70-894.00
CAediting_297654ENST00000314622.7chr3_94128135_+-834.70-832.70-894.00
CAediting_297655ENST00000314622.7chr3_94128139_+-833.40-832.70-894.00
CAediting_297656ENST00000314622.7chr3_94128144_+-836.50-832.70-894.00
CAediting_297657ENST00000314622.7chr3_94128145_+-835.00-832.70-894.00
CAediting_297658ENST00000314622.7chr3_94128149_+-832.00-832.70-894.00
CAediting_297659ENST00000314622.7chr3_94128156_+-833.30-832.70-894.00
CAediting_297660ENST00000314622.7chr3_94128165_+-835.00-832.70-894.00
CAediting_297661ENST00000314622.7chr3_94128169_+-834.90-832.70-894.00
CAediting_297662ENST00000314622.7chr3_94128173_+-832.70-832.70-894.00
CAediting_297663ENST00000314622.7chr3_94128174_+-832.70-832.70-894.00
CAediting_297664ENST00000314622.7chr3_94128176_+-832.30-832.70-894.00
CAediting_297522ENST00000461625.1chr3_94063902_+-112.70-110.60-116.10
CAediting_297523ENST00000461625.1chr3_94063948_+-111.20-110.60-116.10
CAediting_297524ENST00000461625.1chr3_94063949_+-113.60-110.60-116.10
CAediting_297522ENST00000468555.1chr3_94063902_+-181.70-176.30-185.20
CAediting_297523ENST00000468555.1chr3_94063948_+-176.00-176.30-185.20
CAediting_297524ENST00000468555.1chr3_94063949_+-176.90-176.30-185.20
CAediting_297525ENST00000468555.1chr3_94064069_+-176.30-176.30-185.20
CAediting_297522ENST00000477077.1chr3_94063902_+-202.70-199.90-206.70
CAediting_297523ENST00000477077.1chr3_94063948_+-200.50-199.90-206.70
CAediting_297524ENST00000477077.1chr3_94063949_+-202.90-199.90-206.70
CAediting_297525ENST00000477077.1chr3_94064069_+-199.90-199.90-206.70

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Relation with ADAR for NSUN3

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_297617chr3_94127966_+0.03845516530852810.07969413038826880.005175179671338530.107502344824231..
CESCCAediting_297617chr3_94127966_+....0.007290254588292220.243793728262492
COADCAediting_297617chr3_94127966_+0.04516275084122670.175336957286605....
HNSCCAediting_297617chr3_94127966_+..0.0006560540324950010.274227018732752..
LUADCAediting_297628chr3_94128043_+....0.001326232016954380.306443036730662
LUSCCAediting_297628chr3_94128043_+..0.01311783898486270.2187359566925710.003458764916733080.256598516828114
HNSCCAediting_297628chr3_94128043_+....0.03947104182908420.264416424937386
ESCACAediting_297628chr3_94128043_+....0.007436466145530380.271586154582178
SKCMCAediting_297628chr3_94128043_+0.0389139486242160.223134199985726....
BRCACAediting_297629chr3_94128044_+..0.01739439222127570.2176914598324780.009954709127137880.235424025659145
ESCACAediting_297647chr3_94128103_+....0.004607496733859620.386881428027009
LGGCAediting_297648chr3_94128104_+....0.007084216070047510.365704403086399
BRCACAediting_297648chr3_94128104_+0.001636722108004660.226394086338715....
LUSCCAediting_297648chr3_94128104_+..0.01429851786155450.3097204729453370.008769463978609530.330184175472765
STADCAediting_297648chr3_94128104_+....0.04385987883379910.179161933576755
ESCACAediting_297651chr3_94128117_+..0.00055301796047370.379944127981589..
BRCACAediting_297662chr3_94128173_+0.02678594190280280.10924488701385....
COADCAediting_297662chr3_94128173_+....0.0009876006834060680.451857994136378
THCACAediting_297662chr3_94128173_+....0.01678845599901890.250136193711604

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Relation with cancer stages for NSUN3

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
COADpathologic_stageCAediting_297662chr3_94128173_+0.01861264751617240.331699730320049
ESCAclinical_stageCAediting_297628chr3_94128043_+0.0253026846679468-0.367364132139905
ESCAclinical_stageCAediting_297647chr3_94128103_+0.036413126075652-0.470236597624451
ESCAclinical_stageCAediting_297651chr3_94128117_+0.0470466085972962-0.378458814775233
OVclinical_stageCAediting_297647chr3_94128103_+0.0403741759831029-0.256981742704595

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Relation with survival for NSUN3

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
LUSCCAediting_297648chr3_94128104_+0.0178654946633380.01658354.926e-05
HNSCCAediting_297617chr3_94127966_+0.006090913310048960.04955313.0918

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RelatedDrugs for NSUN3

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for NSUN3

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource