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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: S100A2 (CAeditome ID:6273) |
Gene summary for S100A2 |
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Gene information | Gene symbol | S100A2 | Gene ID | 6273 |
Gene name | S100 calcium binding protein A2 | |
Synonyms | CAN19|S100L | |
Cytomap | 1q21.3 | |
Type of gene | protein-coding | |
Description | protein S100-A2 | |
Modification date | 20210518 | |
UniProtAcc | P29034 | |
Context | - 34047450(Novel cytotoxic 1,2,3-triazoles as potential new leads targeting the S100A2-p53complex) |
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Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for S100A2 |
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CAediting_103799(153562054, -), CAediting_103800(153562059, -), CAediting_103801(153562090, -), CAediting_103802(153562126, -), CAediting_103803(153562160, -), CAediting_103804(153562169, -), CAediting_103805(153562202, -), CAediting_103806(153562219, -), CAediting_103807(153562226, -), CAediting_103808(153562232, -), CAediting_103809(153562269, -), CAediting_103810(153562273, -), CAediting_103811(153562279, -), CAediting_103812(153562297, -), CAediting_103813(153562301, -), CAediting_103814(153562311, -), CAediting_103815(153562312, -), CAediting_103816(153562339, -), CAediting_103817(153562343, -), CAediting_103818(153562357, -), CAediting_103819(153562375, -), CAediting_103820(153562388, -), CAediting_103821(153562392, -), CAediting_103822(153562393, -), CAediting_103823(153562414, -), CAediting_103824(153562761, -), CAediting_103825(153562773, -), CAediting_103826(153562774, -), CAediting_103827(153562833, -), CAediting_103828(153562865, -), CAediting_103829(153562867, -), CAediting_103830(153562877, -), CAediting_103831(153562880, -), CAediting_103832(153562889, -), CAediting_103833(153562893, -), CAediting_103834(153562894, -), CAediting_103835(153562906, -), CAediting_103836(153562907, -), CAediting_103837(153562914, -), CAediting_103838(153562919, -), CAediting_103839(153562924, -), CAediting_103840(153562926, -), CAediting_103841(153562940, -), CAediting_103842(153562948, -), CAediting_103843(153562955, -), CAediting_103844(153563017, -), CAediting_103845(153563108, -), CAediting_103846(153563187, -), CAediting_103847(153563234, -), CAediting_103848(153563248, -), CAediting_103849(153563250, -), CAediting_103850(153563260, -), CAediting_103851(153563309, -), CAediting_103852(153563310, -), CAediting_103853(153563315, -), CAediting_103854(153563328, -), CAediting_103855(153563333, -), CAediting_103856(153563346, -), CAediting_103857(153565042, -), CAediting_103858(153565046, -), CAediting_103859(153565230, -), |
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RNA editing positional annotations for S100A2 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_103799 | chr1_153562054_- | intronic |
CAediting_103800 | chr1_153562059_- | intronic |
CAediting_103801 | chr1_153562090_- | intronic |
CAediting_103802 | chr1_153562126_- | intronic |
CAediting_103803 | chr1_153562160_- | intronic |
CAediting_103804 | chr1_153562169_- | intronic |
CAediting_103805 | chr1_153562202_- | intronic |
CAediting_103806 | chr1_153562219_- | intronic |
CAediting_103807 | chr1_153562226_- | intronic |
CAediting_103808 | chr1_153562232_- | intronic |
CAediting_103809 | chr1_153562269_- | intronic |
CAediting_103810 | chr1_153562273_- | intronic |
CAediting_103811 | chr1_153562279_- | intronic |
CAediting_103812 | chr1_153562297_- | intronic |
CAediting_103813 | chr1_153562301_- | intronic |
CAediting_103814 | chr1_153562311_- | intronic |
CAediting_103815 | chr1_153562312_- | intronic |
CAediting_103816 | chr1_153562339_- | intronic |
CAediting_103817 | chr1_153562343_- | intronic |
CAediting_103818 | chr1_153562357_- | intronic |
CAediting_103819 | chr1_153562375_- | intronic |
CAediting_103820 | chr1_153562388_- | intronic |
CAediting_103821 | chr1_153562392_- | intronic |
CAediting_103822 | chr1_153562393_- | intronic |
CAediting_103823 | chr1_153562414_- | intronic |
CAediting_103824 | chr1_153562761_- | intronic |
CAediting_103825 | chr1_153562773_- | intronic |
CAediting_103826 | chr1_153562774_- | intronic |
CAediting_103827 | chr1_153562833_- | intronic |
CAediting_103828 | chr1_153562865_- | intronic |
CAediting_103829 | chr1_153562867_- | intronic |
CAediting_103830 | chr1_153562877_- | intronic |
CAediting_103831 | chr1_153562880_- | intronic |
CAediting_103832 | chr1_153562889_- | intronic |
CAediting_103833 | chr1_153562893_- | intronic |
CAediting_103834 | chr1_153562894_- | intronic |
CAediting_103835 | chr1_153562906_- | intronic |
CAediting_103836 | chr1_153562907_- | intronic |
CAediting_103837 | chr1_153562914_- | intronic |
CAediting_103838 | chr1_153562919_- | intronic |
CAediting_103839 | chr1_153562924_- | intronic |
CAediting_103840 | chr1_153562926_- | intronic |
CAediting_103841 | chr1_153562940_- | intronic |
CAediting_103842 | chr1_153562948_- | intronic |
CAediting_103843 | chr1_153562955_- | intronic |
CAediting_103844 | chr1_153563017_- | intronic |
CAediting_103845 | chr1_153563108_- | intronic |
CAediting_103846 | chr1_153563187_- | intronic |
CAediting_103847 | chr1_153563234_- | intronic |
CAediting_103848 | chr1_153563248_- | intronic |
CAediting_103849 | chr1_153563250_- | intronic |
CAediting_103850 | chr1_153563260_- | intronic |
CAediting_103851 | chr1_153563309_- | intronic |
CAediting_103852 | chr1_153563310_- | intronic |
CAediting_103853 | chr1_153563315_- | intronic |
CAediting_103854 | chr1_153563328_- | intronic |
CAediting_103855 | chr1_153563333_- | intronic |
CAediting_103856 | chr1_153563346_- | intronic |
CAediting_103857 | chr1_153565042_- | intronic |
CAediting_103858 | chr1_153565046_- | intronic |
CAediting_103859 | chr1_153565230_- | intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_103799 | chr1_153562054_- | SINE | Alu | AluJr |
CAediting_103800 | chr1_153562059_- | SINE | Alu | AluJr |
CAediting_103801 | chr1_153562090_- | SINE | Alu | AluJr |
CAediting_103802 | chr1_153562126_- | SINE | Alu | AluJr |
CAediting_103803 | chr1_153562160_- | SINE | Alu | AluJr |
CAediting_103804 | chr1_153562169_- | SINE | Alu | AluJr |
CAediting_103805 | chr1_153562202_- | SINE | Alu | AluJo |
CAediting_103806 | chr1_153562219_- | SINE | Alu | AluJo |
CAediting_103807 | chr1_153562226_- | SINE | Alu | AluJo |
CAediting_103808 | chr1_153562232_- | SINE | Alu | AluJo |
CAediting_103809 | chr1_153562269_- | SINE | Alu | AluJo |
CAediting_103810 | chr1_153562273_- | SINE | Alu | AluJo |
CAediting_103811 | chr1_153562279_- | SINE | Alu | AluJo |
CAediting_103812 | chr1_153562297_- | SINE | Alu | AluJo |
CAediting_103813 | chr1_153562301_- | SINE | Alu | AluJo |
CAediting_103814 | chr1_153562311_- | SINE | Alu | AluJo |
CAediting_103815 | chr1_153562312_- | SINE | Alu | AluJo |
CAediting_103816 | chr1_153562339_- | SINE | Alu | AluJo |
CAediting_103817 | chr1_153562343_- | SINE | Alu | AluJo |
CAediting_103818 | chr1_153562357_- | SINE | Alu | AluJo |
CAediting_103819 | chr1_153562375_- | SINE | Alu | AluJo |
CAediting_103820 | chr1_153562388_- | SINE | Alu | AluJo |
CAediting_103821 | chr1_153562392_- | SINE | Alu | AluJo |
CAediting_103822 | chr1_153562393_- | SINE | Alu | AluJo |
CAediting_103823 | chr1_153562414_- | SINE | Alu | AluJo |
CAediting_103824 | chr1_153562761_- | SINE | Alu | AluJo |
CAediting_103825 | chr1_153562773_- | SINE | Alu | AluJo |
CAediting_103826 | chr1_153562774_- | SINE | Alu | AluJo |
CAediting_103827 | chr1_153562833_- | SINE | Alu | AluJo |
CAediting_103828 | chr1_153562865_- | SINE | Alu | AluJo |
CAediting_103829 | chr1_153562867_- | SINE | Alu | AluJo |
CAediting_103830 | chr1_153562877_- | SINE | Alu | AluJo |
CAediting_103831 | chr1_153562880_- | SINE | Alu | AluJo |
CAediting_103832 | chr1_153562889_- | SINE | Alu | AluJo |
CAediting_103833 | chr1_153562893_- | SINE | Alu | AluJo |
CAediting_103834 | chr1_153562894_- | SINE | Alu | AluJo |
CAediting_103835 | chr1_153562906_- | SINE | Alu | AluJo |
CAediting_103836 | chr1_153562907_- | SINE | Alu | AluJo |
CAediting_103837 | chr1_153562914_- | SINE | Alu | AluJo |
CAediting_103838 | chr1_153562919_- | SINE | Alu | AluJo |
CAediting_103839 | chr1_153562924_- | SINE | Alu | AluJo |
CAediting_103840 | chr1_153562926_- | SINE | Alu | AluJo |
CAediting_103841 | chr1_153562940_- | SINE | Alu | AluJo |
CAediting_103842 | chr1_153562948_- | SINE | Alu | AluJo |
CAediting_103843 | chr1_153562955_- | SINE | Alu | AluJo |
CAediting_103844 | chr1_153563017_- | SINE | Alu | AluSx |
CAediting_103845 | chr1_153563108_- | SINE | Alu | AluSx |
CAediting_103846 | chr1_153563187_- | SINE | Alu | AluSq2 |
CAediting_103847 | chr1_153563234_- | SINE | Alu | AluSq2 |
CAediting_103848 | chr1_153563248_- | SINE | Alu | AluSq2 |
CAediting_103849 | chr1_153563250_- | SINE | Alu | AluSq2 |
CAediting_103850 | chr1_153563260_- | SINE | Alu | AluSq2 |
CAediting_103851 | chr1_153563309_- | SINE | Alu | AluSq2 |
CAediting_103852 | chr1_153563310_- | SINE | Alu | AluSq2 |
CAediting_103853 | chr1_153563315_- | SINE | Alu | AluSq2 |
CAediting_103854 | chr1_153563328_- | SINE | Alu | AluSq2 |
CAediting_103855 | chr1_153563333_- | SINE | Alu | AluSq2 |
CAediting_103856 | chr1_153563346_- | SINE | Alu | AluSq2 |
CAediting_103857 | chr1_153565042_- | SINE | Alu | AluY |
CAediting_103858 | chr1_153565046_- | SINE | Alu | AluY |
CAediting_103859 | chr1_153565230_- | SINE | Alu | AluY |
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RNA A-to-I editing events in the alternative splicing sites for S100A2 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
ES | CAediting_103858 | chr1_153565046_- | 153565043:153565051 | 5SS | 0+3i | GAGTAAGCC | -10.52 | GAGTAGGCC | -15.03 |
IR | CAediting_103858 | chr1_153565046_- | 153565043:153565051 | 5SS | 0+3i | GAGTAAGCC | -10.52 | GAGTAGGCC | -15.03 |
ES | CAediting_103859 | chr1_153565230_- | 153565228:153565236 | 5SS | 0+4i | AGGTTCACG | -12.18 | AGGTTCGCG | -17.94 |
IR | CAediting_103859 | chr1_153565230_- | 153565228:153565236 | 5SS | 0+4i | AGGTTCACG | -12.18 | AGGTTCGCG | -17.94 |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for S100A2 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for S100A2 |
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The effects of the RNA editing to the miRNA binding sites for S100A2 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_442554 | chr5_154685830_+ | ENSG00000196754.9 | ENST00000368708 | hsa-miR-1303 | 153561224 | 153561230 | 7mer-m8 | 153561223 | 153561243 | 144 | -15.6 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_228905 | chr2_188297554_+ | ENSG00000196754.9 | ENST00000368707 | hsa-miR-561-3p | 153561358 | 153561364 | 7mer-m8 | 153561357 | 153561378 | 145 | -6.41 |
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The effects of the RNA editing to the stability of the RNA structures for S100A2 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for S100A2 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
BLCA | CAediting_103804 | chr1_153562169_- | 0.0448991063008654 | 0.191639235599627 | . | . | . | . |
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Relation with cancer stages for S100A2 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for S100A2 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for S100A2 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
S100A2 | P29034 | DB00768 | Olopatadine | Protein S100-A2 | SmallMoleculeDrug | approved |
S100A2 | P29034 | DB14548 | Zinc sulfate, unspecified form | Protein S100-A2 | SmallMoleculeDrug | approved|experimental |
S100A2 | P29034 | DB01593 | Zinc | Protein S100-A2 | SmallMoleculeDrug | approved|investigational |
S100A2 | P29034 | DB09130 | Copper | Protein S100-A2 | SmallMoleculeDrug | approved|investigational |
S100A2 | P29034 | DB14487 | Zinc acetate | Protein S100-A2 | SmallMoleculeDrug | approved|investigational |
S100A2 | P29034 | DB14533 | Zinc chloride | Protein S100-A2 | SmallMoleculeDrug | approved|investigational |
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RelatedDiseases for S100A2 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |