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Editing gene: RPS20 (CAeditome ID:6224)

Gene summary for RPS20

Gene summary

Gene information	Gene symbol	RPS20
	Gene ID	6224
	Gene name	ribosomal protein S20
	Synonyms	S20\|uS10
	Cytomap	8q12.1
	Type of gene	protein-coding
	Description	40S ribosomal protein S20small ribosomal subunit protein uS10
	Modification date	20210518
	UniProtAcc	P60866
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
RPS20	GO:0003735	40S ribosomal protein S20	23636399
RPS20	GO:1990948	40S ribosomal protein S20	23874713
RPS20	GO:1901798	40S ribosomal protein S20	23874713
RPS20	GO:0022626	40S ribosomal protein S20	23636399
RPS20	GO:0022627	40S ribosomal protein S20	8706699

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RNA A-to-I events for RPS20

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000008988.8

RNA A-to-I editing events in Cancer.

CAediting_640571(56067384, -), CAediting_640572(56067400, -), CAediting_640573(56067416, -), CAediting_640574(56067420, -), CAediting_640575(56067429, -), CAediting_640576(56067442, -), CAediting_640577(56067443, -), CAediting_640578(56067472, -), CAediting_640579(56067489, -), CAediting_640580(56067492, -), CAediting_640581(56067495, -), CAediting_640582(56067496, -), CAediting_640583(56067504, -), CAediting_640584(56067510, -), CAediting_640585(56067518, -), CAediting_640586(56067527, -), CAediting_640587(56067538, -), CAediting_640588(56067546, -), CAediting_640589(56067551, -), CAediting_640590(56067562, -), CAediting_640591(56067564, -), CAediting_640592(56067567, -), CAediting_640593(56067574, -), CAediting_640594(56067577, -), CAediting_640595(56067604, -), CAediting_640596(56067623, -), CAediting_640597(56067624, -), CAediting_640598(56067629, -), CAediting_640599(56067639, -), CAediting_640600(56067648, -), CAediting_640601(56067678, -), CAediting_640602(56067682, -), CAediting_640603(56067684, -), CAediting_640604(56068326, -), CAediting_640605(56068333, -), CAediting_640606(56068334, -), CAediting_640607(56068346, -), CAediting_640608(56068360, -), CAediting_640609(56068370, -), CAediting_640610(56068376, -), CAediting_640611(56068381, -), CAediting_640612(56068403, -), CAediting_640613(56068414, -), CAediting_640614(56068416, -), CAediting_640615(56068419, -), CAediting_640616(56068421, -), CAediting_640617(56068426, -), CAediting_640618(56068429, -), CAediting_640619(56068438, -), CAediting_640620(56068451, -), CAediting_640621(56068456, -), CAediting_640622(56068481, -), CAediting_640623(56068486, -), CAediting_640624(56068499, -), CAediting_640625(56068500, -), CAediting_640626(56068516, -), CAediting_640627(56068828, -), CAediting_640628(56068829, -), CAediting_640629(56068830, -), CAediting_640630(56068831, -), CAediting_640631(56068835, -), CAediting_640632(56068837, -), CAediting_640633(56068838, -), CAediting_640634(56068839, -), CAediting_640635(56068840, -), CAediting_640636(56068841, -), CAediting_640637(56068842, -), CAediting_640638(56068843, -), CAediting_640639(56068854, -), CAediting_640640(56068856, -), CAediting_640641(56068860, -), CAediting_640642(56068862, -), CAediting_640643(56068864, -), CAediting_640644(56068883, -), CAediting_640645(56068895, -), CAediting_640646(56068896, -), CAediting_640647(56068901, -), CAediting_640648(56068904, -), CAediting_640649(56068905, -), CAediting_640650(56068907, -), CAediting_640651(56068910, -), CAediting_640652(56068914, -), CAediting_640653(56068920, -), CAediting_640654(56068927, -), CAediting_640655(56068931, -), CAediting_640656(56068950, -), CAediting_640657(56068963, -), CAediting_640658(56068966, -), CAediting_640659(56068967, -), CAediting_640660(56068968, -), CAediting_640661(56068973, -), CAediting_640662(56068974, -), CAediting_640663(56068975, -), CAediting_640664(56068976, -), CAediting_640665(56068977, -), CAediting_640666(56068991, -), CAediting_640667(56068992, -), CAediting_640668(56068993, -), CAediting_640669(56068999, -), CAediting_640670(56069001, -), CAediting_640671(56069002, -), CAediting_640672(56069005, -), CAediting_640673(56069011, -), CAediting_640674(56069014, -), CAediting_640675(56069016, -), CAediting_640676(56069022, -), CAediting_640677(56069025, -), CAediting_640678(56069030, -), CAediting_640679(56069035, -), CAediting_640680(56069038, -), CAediting_640681(56069231, -), CAediting_640682(56069254, -), CAediting_640683(56069255, -), CAediting_640684(56069257, -), CAediting_640685(56069258, -), CAediting_640686(56069260, -), CAediting_640687(56069270, -), CAediting_640688(56069271, -), CAediting_640689(56069276, -), CAediting_640690(56069278, -), CAediting_640691(56069281, -), CAediting_640692(56069295, -), CAediting_640693(56069305, -), CAediting_640694(56069319, -), CAediting_640695(56069320, -), CAediting_640696(56069328, -), CAediting_640697(56069364, -), CAediting_640698(56069382, -), CAediting_640699(56069384, -), CAediting_640700(56069388, -), CAediting_640701(56069395, -), CAediting_640702(56069396, -), CAediting_640703(56069404, -), CAediting_640704(56069407, -), CAediting_640705(56069410, -), CAediting_640706(56069413, -), CAediting_640707(56069414, -), CAediting_640708(56069427, -), CAediting_640709(56069431, -), CAediting_640710(56069436, -), CAediting_640711(56069437, -), CAediting_640712(56069447, -), CAediting_640713(56069459, -), CAediting_640714(56069463, -), CAediting_640715(56069466, -), CAediting_640716(56069467, -), CAediting_640717(56069468, -), CAediting_640718(56069469, -), CAediting_640719(56069472, -), CAediting_640720(56069474, -), CAediting_640721(56069475, -), CAediting_640722(56069476, -), CAediting_640723(56069478, -), CAediting_640724(56069481, -), CAediting_640725(56069492, -), CAediting_640726(56069493, -), CAediting_640727(56069494, -), CAediting_640728(56069498, -), CAediting_640729(56069500, -), CAediting_640730(56069502, -), CAediting_640731(56069503, -), CAediting_640732(56069512, -), CAediting_640733(56069531, -), CAediting_640734(56069536, -), CAediting_640735(56069549, -), CAediting_640736(56069555, -), CAediting_640737(56069563, -), CAediting_640738(56069566, -), CAediting_640739(56069571, -), CAediting_640740(56069578, -), CAediting_640741(56069580, -), CAediting_640742(56069600, -), CAediting_640743(56069607, -), CAediting_640744(56069613, -), CAediting_640745(56070472, -), CAediting_640746(56070473, -), CAediting_640747(56070479, -), CAediting_640748(56070485, -), CAediting_640749(56070510, -), CAediting_640750(56070514, -), CAediting_640751(56070519, -), CAediting_640752(56070531, -), CAediting_640753(56070532, -), CAediting_640754(56070544, -), CAediting_640755(56070553, -), CAediting_640756(56070609, -), CAediting_640757(56070619, -), CAediting_640758(56070623, -), CAediting_640759(56070628, -), CAediting_640760(56070629, -), CAediting_640761(56070647, -), CAediting_640762(56070667, -), CAediting_640763(56070681, -), CAediting_640764(56070707, -), CAediting_640765(56071997, -), CAediting_640766(56072007, -), CAediting_640767(56072024, -), CAediting_640768(56072051, -), CAediting_640769(56072111, -), CAediting_640770(56072114, -), CAediting_640771(56072129, -), CAediting_640772(56072140, -), CAediting_640773(56072172, -), CAediting_640774(56072217, -), CAediting_640775(56072286, -), CAediting_640776(56072289, -), CAediting_640777(56072293, -), CAediting_640778(56072295, -), CAediting_640779(56072307, -), CAediting_640780(56072317, -), CAediting_640781(56072326, -), CAediting_640782(56072335, -), CAediting_640783(56072348, -), CAediting_640784(56072349, -), CAediting_640785(56072360, -), CAediting_640786(56072386, -), CAediting_640787(56072389, -), CAediting_640788(56072391, -), CAediting_640789(56072403, -), CAediting_640790(56072413, -), CAediting_640791(56072414, -), CAediting_640792(56072417, -), CAediting_640793(56072427, -), CAediting_640794(56072428, -), CAediting_640795(56072430, -), CAediting_640796(56072440, -), CAediting_640797(56072443, -), CAediting_640798(56072452, -), CAediting_640799(56072466, -), CAediting_640800(56072469, -), CAediting_640801(56072489, -), CAediting_640802(56072490, -), CAediting_640803(56072514, -),

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RNA editing positional annotations for RPS20 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_640571	chr8_56067384_-	UTR3
CAediting_640572	chr8_56067400_-	UTR3
CAediting_640573	chr8_56067416_-	UTR3
CAediting_640574	chr8_56067420_-	UTR3
CAediting_640575	chr8_56067429_-	UTR3
CAediting_640576	chr8_56067442_-	UTR3
CAediting_640577	chr8_56067443_-	UTR3
CAediting_640578	chr8_56067472_-	UTR3
CAediting_640579	chr8_56067489_-	UTR3
CAediting_640580	chr8_56067492_-	UTR3
CAediting_640581	chr8_56067495_-	UTR3
CAediting_640582	chr8_56067496_-	UTR3
CAediting_640583	chr8_56067504_-	UTR3
CAediting_640584	chr8_56067510_-	UTR3
CAediting_640585	chr8_56067518_-	UTR3
CAediting_640586	chr8_56067527_-	UTR3
CAediting_640587	chr8_56067538_-	UTR3
CAediting_640588	chr8_56067546_-	UTR3
CAediting_640589	chr8_56067551_-	UTR3
CAediting_640590	chr8_56067562_-	UTR3
CAediting_640591	chr8_56067564_-	UTR3
CAediting_640592	chr8_56067567_-	UTR3
CAediting_640593	chr8_56067574_-	UTR3
CAediting_640594	chr8_56067577_-	UTR3
CAediting_640595	chr8_56067604_-	UTR3
CAediting_640596	chr8_56067623_-	UTR3
CAediting_640597	chr8_56067624_-	UTR3
CAediting_640598	chr8_56067629_-	UTR3
CAediting_640599	chr8_56067639_-	UTR3
CAediting_640600	chr8_56067648_-	UTR3
CAediting_640601	chr8_56067678_-	UTR3
CAediting_640602	chr8_56067682_-	UTR3
CAediting_640603	chr8_56067684_-	UTR3
CAediting_640604	chr8_56068326_-	UTR3
CAediting_640605	chr8_56068333_-	UTR3
CAediting_640606	chr8_56068334_-	UTR3
CAediting_640607	chr8_56068346_-	UTR3
CAediting_640608	chr8_56068360_-	UTR3
CAediting_640609	chr8_56068370_-	UTR3
CAediting_640610	chr8_56068376_-	UTR3
CAediting_640611	chr8_56068381_-	UTR3
CAediting_640612	chr8_56068403_-	UTR3
CAediting_640613	chr8_56068414_-	UTR3
CAediting_640614	chr8_56068416_-	UTR3
CAediting_640615	chr8_56068419_-	UTR3
CAediting_640616	chr8_56068421_-	UTR3
CAediting_640617	chr8_56068426_-	UTR3
CAediting_640618	chr8_56068429_-	UTR3
CAediting_640619	chr8_56068438_-	UTR3
CAediting_640620	chr8_56068451_-	UTR3
CAediting_640621	chr8_56068456_-	UTR3
CAediting_640622	chr8_56068481_-	UTR3
CAediting_640623	chr8_56068486_-	UTR3
CAediting_640624	chr8_56068499_-	UTR3
CAediting_640625	chr8_56068500_-	UTR3
CAediting_640626	chr8_56068516_-	UTR3
CAediting_640627	chr8_56068828_-	intronic
CAediting_640628	chr8_56068829_-	intronic
CAediting_640629	chr8_56068830_-	intronic
CAediting_640630	chr8_56068831_-	intronic
CAediting_640631	chr8_56068835_-	intronic
CAediting_640632	chr8_56068837_-	intronic
CAediting_640633	chr8_56068838_-	intronic
CAediting_640634	chr8_56068839_-	intronic
CAediting_640635	chr8_56068840_-	intronic
CAediting_640636	chr8_56068841_-	intronic
CAediting_640637	chr8_56068842_-	intronic
CAediting_640638	chr8_56068843_-	intronic
CAediting_640639	chr8_56068854_-	intronic
CAediting_640640	chr8_56068856_-	intronic
CAediting_640641	chr8_56068860_-	intronic
CAediting_640642	chr8_56068862_-	intronic
CAediting_640643	chr8_56068864_-	intronic
CAediting_640644	chr8_56068883_-	intronic
CAediting_640645	chr8_56068895_-	intronic
CAediting_640646	chr8_56068896_-	intronic
CAediting_640647	chr8_56068901_-	intronic
CAediting_640648	chr8_56068904_-	intronic
CAediting_640649	chr8_56068905_-	intronic
CAediting_640650	chr8_56068907_-	intronic
CAediting_640651	chr8_56068910_-	intronic
CAediting_640652	chr8_56068914_-	intronic
CAediting_640653	chr8_56068920_-	intronic
CAediting_640654	chr8_56068927_-	intronic
CAediting_640655	chr8_56068931_-	intronic
CAediting_640656	chr8_56068950_-	intronic
CAediting_640657	chr8_56068963_-	intronic
CAediting_640658	chr8_56068966_-	intronic
CAediting_640659	chr8_56068967_-	intronic
CAediting_640660	chr8_56068968_-	intronic
CAediting_640661	chr8_56068973_-	intronic
CAediting_640662	chr8_56068974_-	intronic
CAediting_640663	chr8_56068975_-	intronic
CAediting_640664	chr8_56068976_-	intronic
CAediting_640665	chr8_56068977_-	intronic
CAediting_640666	chr8_56068991_-	intronic
CAediting_640667	chr8_56068992_-	intronic
CAediting_640668	chr8_56068993_-	intronic
CAediting_640669	chr8_56068999_-	intronic
CAediting_640670	chr8_56069001_-	intronic
CAediting_640671	chr8_56069002_-	intronic
CAediting_640672	chr8_56069005_-	intronic
CAediting_640673	chr8_56069011_-	intronic
CAediting_640674	chr8_56069014_-	intronic
CAediting_640675	chr8_56069016_-	intronic
CAediting_640676	chr8_56069022_-	intronic
CAediting_640677	chr8_56069025_-	intronic
CAediting_640678	chr8_56069030_-	intronic
CAediting_640679	chr8_56069035_-	intronic
CAediting_640680	chr8_56069038_-	intronic
CAediting_640681	chr8_56069231_-	intronic
CAediting_640682	chr8_56069254_-	intronic
CAediting_640683	chr8_56069255_-	intronic
CAediting_640684	chr8_56069257_-	intronic
CAediting_640685	chr8_56069258_-	intronic
CAediting_640686	chr8_56069260_-	intronic
CAediting_640687	chr8_56069270_-	intronic
CAediting_640688	chr8_56069271_-	intronic
CAediting_640689	chr8_56069276_-	intronic
CAediting_640690	chr8_56069278_-	intronic
CAediting_640691	chr8_56069281_-	intronic
CAediting_640692	chr8_56069295_-	intronic
CAediting_640693	chr8_56069305_-	intronic
CAediting_640694	chr8_56069319_-	intronic
CAediting_640695	chr8_56069320_-	intronic
CAediting_640696	chr8_56069328_-	intronic
CAediting_640697	chr8_56069364_-	intronic
CAediting_640698	chr8_56069382_-	intronic
CAediting_640699	chr8_56069384_-	intronic
CAediting_640700	chr8_56069388_-	intronic
CAediting_640701	chr8_56069395_-	intronic
CAediting_640702	chr8_56069396_-	intronic
CAediting_640703	chr8_56069404_-	intronic
CAediting_640704	chr8_56069407_-	intronic
CAediting_640705	chr8_56069410_-	intronic
CAediting_640706	chr8_56069413_-	intronic
CAediting_640707	chr8_56069414_-	intronic
CAediting_640708	chr8_56069427_-	intronic
CAediting_640709	chr8_56069431_-	intronic
CAediting_640710	chr8_56069436_-	intronic
CAediting_640711	chr8_56069437_-	intronic
CAediting_640712	chr8_56069447_-	intronic
CAediting_640713	chr8_56069459_-	intronic
CAediting_640714	chr8_56069463_-	intronic
CAediting_640715	chr8_56069466_-	intronic
CAediting_640716	chr8_56069467_-	intronic
CAediting_640717	chr8_56069468_-	intronic
CAediting_640718	chr8_56069469_-	intronic
CAediting_640719	chr8_56069472_-	intronic
CAediting_640720	chr8_56069474_-	intronic
CAediting_640721	chr8_56069475_-	intronic
CAediting_640722	chr8_56069476_-	intronic
CAediting_640723	chr8_56069478_-	intronic
CAediting_640724	chr8_56069481_-	intronic
CAediting_640725	chr8_56069492_-	intronic
CAediting_640726	chr8_56069493_-	intronic
CAediting_640727	chr8_56069494_-	intronic
CAediting_640728	chr8_56069498_-	intronic
CAediting_640729	chr8_56069500_-	intronic
CAediting_640730	chr8_56069502_-	intronic
CAediting_640731	chr8_56069503_-	intronic
CAediting_640732	chr8_56069512_-	intronic
CAediting_640733	chr8_56069531_-	intronic
CAediting_640734	chr8_56069536_-	intronic
CAediting_640735	chr8_56069549_-	intronic
CAediting_640736	chr8_56069555_-	intronic
CAediting_640737	chr8_56069563_-	intronic
CAediting_640738	chr8_56069566_-	intronic
CAediting_640739	chr8_56069571_-	intronic
CAediting_640740	chr8_56069578_-	intronic
CAediting_640741	chr8_56069580_-	intronic
CAediting_640742	chr8_56069600_-	intronic
CAediting_640743	chr8_56069607_-	intronic
CAediting_640744	chr8_56069613_-	intronic
CAediting_640745	chr8_56070472_-	intronic
CAediting_640746	chr8_56070473_-	intronic
CAediting_640747	chr8_56070479_-	intronic
CAediting_640748	chr8_56070485_-	intronic
CAediting_640749	chr8_56070510_-	intronic
CAediting_640750	chr8_56070514_-	intronic
CAediting_640751	chr8_56070519_-	intronic
CAediting_640752	chr8_56070531_-	intronic
CAediting_640753	chr8_56070532_-	intronic
CAediting_640754	chr8_56070544_-	intronic
CAediting_640755	chr8_56070553_-	intronic
CAediting_640756	chr8_56070609_-	intronic
CAediting_640757	chr8_56070619_-	intronic
CAediting_640758	chr8_56070623_-	intronic
CAediting_640759	chr8_56070628_-	intronic
CAediting_640760	chr8_56070629_-	intronic
CAediting_640761	chr8_56070647_-	intronic
CAediting_640762	chr8_56070667_-	intronic
CAediting_640763	chr8_56070681_-	intronic
CAediting_640764	chr8_56070707_-	intronic
CAediting_640765	chr8_56071997_-	intronic
CAediting_640766	chr8_56072007_-	intronic
CAediting_640767	chr8_56072024_-	intronic
CAediting_640768	chr8_56072051_-	intronic
CAediting_640769	chr8_56072111_-	intronic
CAediting_640770	chr8_56072114_-	intronic
CAediting_640771	chr8_56072129_-	intronic
CAediting_640772	chr8_56072140_-	intronic
CAediting_640773	chr8_56072172_-	intronic
CAediting_640774	chr8_56072217_-	intronic
CAediting_640775	chr8_56072286_-	intronic
CAediting_640776	chr8_56072289_-	intronic
CAediting_640777	chr8_56072293_-	intronic
CAediting_640778	chr8_56072295_-	intronic
CAediting_640779	chr8_56072307_-	intronic
CAediting_640780	chr8_56072317_-	intronic
CAediting_640781	chr8_56072326_-	intronic
CAediting_640782	chr8_56072335_-	intronic
CAediting_640783	chr8_56072348_-	intronic
CAediting_640784	chr8_56072349_-	intronic
CAediting_640785	chr8_56072360_-	intronic
CAediting_640786	chr8_56072386_-	intronic
CAediting_640787	chr8_56072389_-	intronic
CAediting_640788	chr8_56072391_-	intronic
CAediting_640789	chr8_56072403_-	intronic
CAediting_640790	chr8_56072413_-	intronic
CAediting_640791	chr8_56072414_-	intronic
CAediting_640792	chr8_56072417_-	intronic
CAediting_640793	chr8_56072427_-	intronic
CAediting_640794	chr8_56072428_-	intronic
CAediting_640795	chr8_56072430_-	intronic
CAediting_640796	chr8_56072440_-	intronic
CAediting_640797	chr8_56072443_-	intronic
CAediting_640798	chr8_56072452_-	intronic
CAediting_640799	chr8_56072466_-	intronic
CAediting_640800	chr8_56072469_-	intronic
CAediting_640801	chr8_56072489_-	intronic
CAediting_640802	chr8_56072490_-	intronic
CAediting_640803	chr8_56072514_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_640571	chr8_56067384_-	LINE	L1	L1MB2
CAediting_640572	chr8_56067400_-	LINE	L1	L1MB2
CAediting_640573	chr8_56067416_-	SINE	Alu	AluY
CAediting_640574	chr8_56067420_-	SINE	Alu	AluY
CAediting_640575	chr8_56067429_-	SINE	Alu	AluY
CAediting_640576	chr8_56067442_-	SINE	Alu	AluY
CAediting_640577	chr8_56067443_-	SINE	Alu	AluY
CAediting_640578	chr8_56067472_-	SINE	Alu	AluY
CAediting_640579	chr8_56067489_-	SINE	Alu	AluY
CAediting_640580	chr8_56067492_-	SINE	Alu	AluY
CAediting_640581	chr8_56067495_-	SINE	Alu	AluY
CAediting_640582	chr8_56067496_-	SINE	Alu	AluY
CAediting_640583	chr8_56067504_-	SINE	Alu	AluY
CAediting_640584	chr8_56067510_-	SINE	Alu	AluY
CAediting_640585	chr8_56067518_-	SINE	Alu	AluY
CAediting_640586	chr8_56067527_-	SINE	Alu	AluY
CAediting_640587	chr8_56067538_-	SINE	Alu	AluY
CAediting_640588	chr8_56067546_-	SINE	Alu	AluY
CAediting_640589	chr8_56067551_-	SINE	Alu	AluY
CAediting_640590	chr8_56067562_-	SINE	Alu	AluY
CAediting_640591	chr8_56067564_-	SINE	Alu	AluY
CAediting_640592	chr8_56067567_-	SINE	Alu	AluY
CAediting_640593	chr8_56067574_-	SINE	Alu	AluY
CAediting_640594	chr8_56067577_-	SINE	Alu	AluY
CAediting_640595	chr8_56067604_-	SINE	Alu	AluY
CAediting_640596	chr8_56067623_-	SINE	Alu	AluY
CAediting_640597	chr8_56067624_-	SINE	Alu	AluY
CAediting_640598	chr8_56067629_-	SINE	Alu	AluY
CAediting_640599	chr8_56067639_-	SINE	Alu	AluY
CAediting_640600	chr8_56067648_-	SINE	Alu	AluY
CAediting_640601	chr8_56067678_-	SINE	Alu	AluY
CAediting_640602	chr8_56067682_-	SINE	Alu	AluY
CAediting_640603	chr8_56067684_-	SINE	Alu	AluY
CAediting_640604	chr8_56068326_-	SINE	Alu	AluSz6
CAediting_640605	chr8_56068333_-	SINE	Alu	AluSz6
CAediting_640606	chr8_56068334_-	SINE	Alu	AluSz6
CAediting_640607	chr8_56068346_-	SINE	Alu	AluSz6
CAediting_640608	chr8_56068360_-	SINE	Alu	AluSz6
CAediting_640609	chr8_56068370_-	SINE	Alu	AluSz6
CAediting_640610	chr8_56068376_-	SINE	Alu	AluSz6
CAediting_640611	chr8_56068381_-	SINE	Alu	AluSz6
CAediting_640612	chr8_56068403_-	SINE	Alu	AluSz6
CAediting_640613	chr8_56068414_-	SINE	Alu	AluSz6
CAediting_640614	chr8_56068416_-	SINE	Alu	AluSz6
CAediting_640615	chr8_56068419_-	SINE	Alu	AluSz6
CAediting_640616	chr8_56068421_-	SINE	Alu	AluSz6
CAediting_640617	chr8_56068426_-	SINE	Alu	AluSz6
CAediting_640618	chr8_56068429_-	SINE	Alu	AluSz6
CAediting_640619	chr8_56068438_-	SINE	Alu	AluSz6
CAediting_640620	chr8_56068451_-	SINE	Alu	AluSz6
CAediting_640621	chr8_56068456_-	SINE	Alu	AluSz6
CAediting_640622	chr8_56068481_-	SINE	Alu	AluSz6
CAediting_640623	chr8_56068486_-	SINE	Alu	AluSz6
CAediting_640624	chr8_56068499_-	SINE	Alu	AluSz6
CAediting_640625	chr8_56068500_-	SINE	Alu	AluSz6
CAediting_640626	chr8_56068516_-	SINE	Alu	AluSz6
CAediting_640627	chr8_56068828_-	SINE	Alu	AluSx
CAediting_640628	chr8_56068829_-	SINE	Alu	AluSx
CAediting_640629	chr8_56068830_-	SINE	Alu	AluSx
CAediting_640630	chr8_56068831_-	SINE	Alu	AluSx
CAediting_640631	chr8_56068835_-	SINE	Alu	AluSx
CAediting_640632	chr8_56068837_-	SINE	Alu	AluSx
CAediting_640633	chr8_56068838_-	SINE	Alu	AluSx
CAediting_640634	chr8_56068839_-	SINE	Alu	AluSx
CAediting_640635	chr8_56068840_-	SINE	Alu	AluSx
CAediting_640636	chr8_56068841_-	SINE	Alu	AluSx
CAediting_640637	chr8_56068842_-	SINE	Alu	AluSx
CAediting_640638	chr8_56068843_-	SINE	Alu	AluSx
CAediting_640639	chr8_56068854_-	SINE	Alu	AluSx
CAediting_640640	chr8_56068856_-	SINE	Alu	AluSx
CAediting_640641	chr8_56068860_-	SINE	Alu	AluSx
CAediting_640642	chr8_56068862_-	SINE	Alu	AluSx
CAediting_640643	chr8_56068864_-	SINE	Alu	AluSx
CAediting_640644	chr8_56068883_-	SINE	Alu	AluSx
CAediting_640645	chr8_56068895_-	SINE	Alu	AluSx
CAediting_640646	chr8_56068896_-	SINE	Alu	AluSx
CAediting_640647	chr8_56068901_-	SINE	Alu	AluSx
CAediting_640648	chr8_56068904_-	SINE	Alu	AluSx
CAediting_640649	chr8_56068905_-	SINE	Alu	AluSx
CAediting_640650	chr8_56068907_-	SINE	Alu	AluSx
CAediting_640651	chr8_56068910_-	SINE	Alu	AluSx
CAediting_640652	chr8_56068914_-	SINE	Alu	AluSx
CAediting_640653	chr8_56068920_-	SINE	Alu	AluSx
CAediting_640654	chr8_56068927_-	SINE	Alu	AluSx
CAediting_640655	chr8_56068931_-	SINE	Alu	AluSx
CAediting_640656	chr8_56068950_-	SINE	Alu	AluSx
CAediting_640657	chr8_56068963_-	SINE	Alu	AluSx
CAediting_640658	chr8_56068966_-	SINE	Alu	AluSx
CAediting_640659	chr8_56068967_-	SINE	Alu	AluSx
CAediting_640660	chr8_56068968_-	SINE	Alu	AluSx
CAediting_640661	chr8_56068973_-	SINE	Alu	AluSx
CAediting_640662	chr8_56068974_-	SINE	Alu	AluSx
CAediting_640663	chr8_56068975_-	SINE	Alu	AluSx
CAediting_640664	chr8_56068976_-	SINE	Alu	AluSx
CAediting_640665	chr8_56068977_-	SINE	Alu	AluSx
CAediting_640666	chr8_56068991_-	SINE	Alu	AluSx
CAediting_640667	chr8_56068992_-	SINE	Alu	AluSx
CAediting_640668	chr8_56068993_-	SINE	Alu	AluSx
CAediting_640669	chr8_56068999_-	SINE	Alu	AluSx
CAediting_640670	chr8_56069001_-	SINE	Alu	AluSx
CAediting_640671	chr8_56069002_-	SINE	Alu	AluSx
CAediting_640672	chr8_56069005_-	SINE	Alu	AluSx
CAediting_640673	chr8_56069011_-	SINE	Alu	AluSx
CAediting_640674	chr8_56069014_-	SINE	Alu	AluSx
CAediting_640675	chr8_56069016_-	SINE	Alu	AluSx
CAediting_640676	chr8_56069022_-	SINE	Alu	AluSx
CAediting_640677	chr8_56069025_-	SINE	Alu	AluSx
CAediting_640678	chr8_56069030_-	SINE	Alu	AluSx
CAediting_640679	chr8_56069035_-	SINE	Alu	AluSx
CAediting_640680	chr8_56069038_-	SINE	Alu	AluSx
CAediting_640682	chr8_56069254_-	SINE	Alu	AluYg6
CAediting_640683	chr8_56069255_-	SINE	Alu	AluYg6
CAediting_640684	chr8_56069257_-	SINE	Alu	AluYg6
CAediting_640685	chr8_56069258_-	SINE	Alu	AluYg6
CAediting_640686	chr8_56069260_-	SINE	Alu	AluYg6
CAediting_640687	chr8_56069270_-	SINE	Alu	AluYg6
CAediting_640688	chr8_56069271_-	SINE	Alu	AluYg6
CAediting_640689	chr8_56069276_-	SINE	Alu	AluYg6
CAediting_640690	chr8_56069278_-	SINE	Alu	AluYg6
CAediting_640691	chr8_56069281_-	SINE	Alu	AluYg6
CAediting_640692	chr8_56069295_-	SINE	Alu	AluYg6
CAediting_640693	chr8_56069305_-	SINE	Alu	AluYg6
CAediting_640694	chr8_56069319_-	SINE	Alu	AluYg6
CAediting_640695	chr8_56069320_-	SINE	Alu	AluYg6
CAediting_640696	chr8_56069328_-	SINE	Alu	AluYg6
CAediting_640697	chr8_56069364_-	SINE	Alu	AluSx
CAediting_640698	chr8_56069382_-	SINE	Alu	AluSx
CAediting_640699	chr8_56069384_-	SINE	Alu	AluSx
CAediting_640700	chr8_56069388_-	SINE	Alu	AluSx
CAediting_640701	chr8_56069395_-	SINE	Alu	AluSx
CAediting_640702	chr8_56069396_-	SINE	Alu	AluSx
CAediting_640703	chr8_56069404_-	SINE	Alu	AluSx
CAediting_640704	chr8_56069407_-	SINE	Alu	AluSx
CAediting_640705	chr8_56069410_-	SINE	Alu	AluSx
CAediting_640706	chr8_56069413_-	SINE	Alu	AluSx
CAediting_640707	chr8_56069414_-	SINE	Alu	AluSx
CAediting_640708	chr8_56069427_-	SINE	Alu	AluSx
CAediting_640709	chr8_56069431_-	SINE	Alu	AluSx
CAediting_640710	chr8_56069436_-	SINE	Alu	AluSx
CAediting_640711	chr8_56069437_-	SINE	Alu	AluSx
CAediting_640712	chr8_56069447_-	SINE	Alu	AluSx
CAediting_640713	chr8_56069459_-	SINE	Alu	AluSx
CAediting_640714	chr8_56069463_-	SINE	Alu	AluSx
CAediting_640715	chr8_56069466_-	SINE	Alu	AluSx
CAediting_640716	chr8_56069467_-	SINE	Alu	AluSx
CAediting_640717	chr8_56069468_-	SINE	Alu	AluSx
CAediting_640718	chr8_56069469_-	SINE	Alu	AluSx
CAediting_640719	chr8_56069472_-	SINE	Alu	AluSx
CAediting_640720	chr8_56069474_-	SINE	Alu	AluSx
CAediting_640721	chr8_56069475_-	SINE	Alu	AluSx
CAediting_640722	chr8_56069476_-	SINE	Alu	AluSx
CAediting_640723	chr8_56069478_-	SINE	Alu	AluSx
CAediting_640724	chr8_56069481_-	SINE	Alu	AluSx
CAediting_640725	chr8_56069492_-	SINE	Alu	AluSx
CAediting_640726	chr8_56069493_-	SINE	Alu	AluSx
CAediting_640727	chr8_56069494_-	SINE	Alu	AluSx
CAediting_640728	chr8_56069498_-	SINE	Alu	AluSx
CAediting_640729	chr8_56069500_-	SINE	Alu	AluSx
CAediting_640730	chr8_56069502_-	SINE	Alu	AluSx
CAediting_640731	chr8_56069503_-	SINE	Alu	AluSx
CAediting_640732	chr8_56069512_-	SINE	Alu	AluSx
CAediting_640733	chr8_56069531_-	SINE	Alu	AluSx
CAediting_640734	chr8_56069536_-	SINE	Alu	AluSx
CAediting_640735	chr8_56069549_-	SINE	Alu	AluSx
CAediting_640736	chr8_56069555_-	SINE	Alu	AluSx
CAediting_640737	chr8_56069563_-	SINE	Alu	AluSx
CAediting_640738	chr8_56069566_-	SINE	Alu	AluSx
CAediting_640739	chr8_56069571_-	SINE	Alu	AluSx
CAediting_640740	chr8_56069578_-	SINE	Alu	AluSx
CAediting_640741	chr8_56069580_-	SINE	Alu	AluSx
CAediting_640745	chr8_56070472_-	SINE	Alu	AluJo
CAediting_640746	chr8_56070473_-	SINE	Alu	AluJo
CAediting_640747	chr8_56070479_-	SINE	Alu	AluJo
CAediting_640748	chr8_56070485_-	SINE	Alu	AluJo
CAediting_640749	chr8_56070510_-	SINE	Alu	AluJo
CAediting_640750	chr8_56070514_-	SINE	Alu	AluJo
CAediting_640751	chr8_56070519_-	SINE	Alu	AluJo
CAediting_640752	chr8_56070531_-	SINE	Alu	AluJo
CAediting_640753	chr8_56070532_-	SINE	Alu	AluJo
CAediting_640754	chr8_56070544_-	SINE	Alu	AluJo
CAediting_640755	chr8_56070553_-	SINE	Alu	AluJo
CAediting_640756	chr8_56070609_-	SINE	Alu	AluJo
CAediting_640757	chr8_56070619_-	SINE	Alu	AluJo
CAediting_640758	chr8_56070623_-	SINE	Alu	AluJo
CAediting_640759	chr8_56070628_-	SINE	Alu	AluJo
CAediting_640760	chr8_56070629_-	SINE	Alu	AluJo
CAediting_640761	chr8_56070647_-	SINE	Alu	AluJo
CAediting_640762	chr8_56070667_-	SINE	Alu	AluJo
CAediting_640763	chr8_56070681_-	SINE	Alu	AluJo
CAediting_640764	chr8_56070707_-	SINE	Alu	AluJo
CAediting_640765	chr8_56071997_-	SINE	Alu	AluJo
CAediting_640766	chr8_56072007_-	SINE	Alu	AluJo
CAediting_640767	chr8_56072024_-	SINE	Alu	AluJo
CAediting_640768	chr8_56072051_-	SINE	Alu	AluJo
CAediting_640769	chr8_56072111_-	SINE	Alu	AluJo
CAediting_640770	chr8_56072114_-	SINE	Alu	AluJo
CAediting_640771	chr8_56072129_-	SINE	Alu	AluJo
CAediting_640772	chr8_56072140_-	SINE	Alu	AluJo
CAediting_640773	chr8_56072172_-	SINE	Alu	AluJo
CAediting_640774	chr8_56072217_-	SINE	Alu	AluJo
CAediting_640775	chr8_56072286_-	SINE	Alu	AluSx1
CAediting_640776	chr8_56072289_-	SINE	Alu	AluSx1
CAediting_640777	chr8_56072293_-	SINE	Alu	AluSx1
CAediting_640778	chr8_56072295_-	SINE	Alu	AluSx1
CAediting_640779	chr8_56072307_-	SINE	Alu	AluSx1
CAediting_640780	chr8_56072317_-	SINE	Alu	AluSx1
CAediting_640781	chr8_56072326_-	SINE	Alu	AluSx1
CAediting_640782	chr8_56072335_-	SINE	Alu	AluSx1
CAediting_640783	chr8_56072348_-	SINE	Alu	AluSx1
CAediting_640784	chr8_56072349_-	SINE	Alu	AluSx1
CAediting_640785	chr8_56072360_-	SINE	Alu	AluSx1
CAediting_640786	chr8_56072386_-	SINE	Alu	AluSx1
CAediting_640787	chr8_56072389_-	SINE	Alu	AluSx1
CAediting_640788	chr8_56072391_-	SINE	Alu	AluSx1
CAediting_640789	chr8_56072403_-	SINE	Alu	AluSx1
CAediting_640790	chr8_56072413_-	SINE	Alu	AluSx1
CAediting_640791	chr8_56072414_-	SINE	Alu	AluSx1
CAediting_640792	chr8_56072417_-	SINE	Alu	AluSx1
CAediting_640793	chr8_56072427_-	SINE	Alu	AluSx1
CAediting_640794	chr8_56072428_-	SINE	Alu	AluSx1
CAediting_640795	chr8_56072430_-	SINE	Alu	AluSx1
CAediting_640796	chr8_56072440_-	SINE	Alu	AluSx1
CAediting_640797	chr8_56072443_-	SINE	Alu	AluSx1
CAediting_640798	chr8_56072452_-	SINE	Alu	AluSx1
CAediting_640799	chr8_56072466_-	SINE	Alu	AluSx1
CAediting_640800	chr8_56072469_-	SINE	Alu	AluSx1
CAediting_640801	chr8_56072489_-	SINE	Alu	AluSx1
CAediting_640802	chr8_56072490_-	SINE	Alu	AluSx1
CAediting_640803	chr8_56072514_-	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for RPS20

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_640585	chr8_56067518_-	56067517:56067539	3SS	2+0i	TAATTTTTTTGTATTTTTAGTAG	5.12	TAATTTTTTTGTATTTTTAGTGG	6.45
IR	CAediting_640586	chr8_56067527_-	56067517:56067539	3SS	0+8i	TAATTTTTTTGTATTTTTAGTAG	5.12	TAATTTTTTTGTGTTTTTAGTAG	5.83
IR	CAediting_640587	chr8_56067538_-	56067517:56067539	3SS	0+19i	TAATTTTTTTGTATTTTTAGTAG	5.12	TGATTTTTTTGTATTTTTAGTAG	6.07
IR	CAediting_640602	chr8_56067682_-	56067680:56067702	3SS	1+0i	TCCCTTTTTTTTTTTTTCAGACG	11.07	TCCCTTTTTTTTTTTTTCAGGCG	11.68
IR	CAediting_640603	chr8_56067684_-	56067680:56067702	3SS	0+2i	TCCCTTTTTTTTTTTTTCAGACG	11.07	TCCCTTTTTTTTTTTTTCGGACG	3.12
ES	CAediting_640613	chr8_56068414_-	56068406:56068414	5SS	3+0i	AGGTGTGCA	-27.62	GGGTGTGCA	-31.5
IR	CAediting_640613	chr8_56068414_-	56068406:56068414	5SS	3+0i	AGGTGTGCA	-27.62	GGGTGTGCA	-31.5

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000008988.8.RPS20.

Correlation between RNA A-to-I editing and PSI for ENSG00000008988.8.RPS20.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RPS20

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

LGG.CAediting_640793.ENSG00000008988.RPS20.png
Soverview

PCPG.CAediting_640617.ENSG00000008988.RPS20.png
Soverview

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Protein coding region RNA A-to-I editings for RPS20

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for RPS20

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_640575	chr8_56067429_-	ENSG00000008988.8	ENST00000519807	hsa-miR-106a-3p	56067427	56067432	6mer	56067426	56067447	141.00	-21.13
CAediting_640576	chr8_56067442_-	ENSG00000008988.8	ENST00000519807	hsa-miR-326	56067440	56067446	7mer-m8	56067439	56067458	140.00	-13.39
CAediting_640576	chr8_56067442_-	ENSG00000008988.8	ENST00000519807	hsa-miR-330-5p	56067440	56067446	7mer-m8	56067439	56067460	140.00	-18.93
CAediting_640576	chr8_56067442_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4314	56067441	56067447	7mer-m8	56067440	56067458	147.00	-25.57
CAediting_640576	chr8_56067442_-	ENSG00000008988.8	ENST00000519807	hsa-miR-514a-5p	56067439	56067445	7mer-m8	56067438	56067461	148.00	-19.37
CAediting_640576	chr8_56067442_-	ENSG00000008988.8	ENST00000519807	hsa-miR-514a-5p	56067439	56067445	7mer-m8	56067438	56067461	148.00	-19.37
CAediting_640576	chr8_56067442_-	ENSG00000008988.8	ENST00000519807	hsa-miR-514a-5p	56067439	56067445	7mer-m8	56067438	56067461	148.00	-19.37
CAediting_640577	chr8_56067443_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6771-5p	56067441	56067448	8mer-1a	56067441	56067465	155.00	-24.77
CAediting_640586	chr8_56067527_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4801	56067526	56067531	6mer	56067525	56067546	144.00	-13.85
CAediting_640587	chr8_56067538_-	ENSG00000008988.8	ENST00000519807	hsa-miR-34a-3p	56067535	56067541	7mer-m8	56067534	56067556	149.00	-9.31
CAediting_640588	chr8_56067546_-	ENSG00000008988.8	ENST00000519807	hsa-miR-27a-5p	56067543	56067549	7mer-m8	56067542	56067562	150.00	-18.12
CAediting_640591	chr8_56067564_-	ENSG00000008988.8	ENST00000519807	hsa-miR-17-3p	56067561	56067567	7mer-m8	56067560	56067582	150.00	-22.27
CAediting_640593	chr8_56067574_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4691-3p	56067570	56067576	7mer-m8	56067569	56067596	150.00	-26.36
CAediting_640607	chr8_56068346_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3940-3p	56068341	56068348	8mer-1a	56068341	56068362	140.00	-17.60
CAediting_640607	chr8_56068346_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6850-3p	56068345	56068350	6mer	56068344	56068363	142.00	-23.65
CAediting_640617	chr8_56068426_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3157-5p	56068421	56068427	7mer-m8	56068420	56068441	140.00	-19.01
CAediting_640617	chr8_56068426_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4691-3p	56068421	56068428	8mer-1a	56068421	56068448	155.00	-24.38
CAediting_640571	chr8_56067384_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3613-3p	56067383	56067390	8mer-1a	56067383	56067405	148.00	-4.77
CAediting_640571	chr8_56067384_-	ENSG00000008988.8	ENST00000519807	hsa-miR-371b-5p	56067382	56067388	7mer-m8	56067381	56067402	148.00	-10.36
CAediting_640571	chr8_56067384_-	ENSG00000008988.8	ENST00000519807	hsa-miR-373-5p	56067382	56067388	7mer-m8	56067381	56067402	150.00	-12.10
CAediting_640571	chr8_56067384_-	ENSG00000008988.8	ENST00000519807	hsa-miR-616-5p	56067382	56067388	7mer-m8	56067381	56067402	140.00	-5.62
CAediting_640572	chr8_56067400_-	ENSG00000008988.8	ENST00000519807	hsa-miR-548aa	56067396	56067402	7mer-m8	56067395	56067419	140.00	-12.27
CAediting_640572	chr8_56067400_-	ENSG00000008988.8	ENST00000519807	hsa-miR-548aa	56067396	56067402	7mer-m8	56067395	56067419	140.00	-12.27
CAediting_640572	chr8_56067400_-	ENSG00000008988.8	ENST00000519807	hsa-miR-548ac	56067395	56067401	7mer-m8	56067394	56067417	142.00	-12.61
CAediting_640572	chr8_56067400_-	ENSG00000008988.8	ENST00000519807	hsa-miR-548ap-3p	56067396	56067402	7mer-m8	56067395	56067413	140.00	-7.46
CAediting_640572	chr8_56067400_-	ENSG00000008988.8	ENST00000519807	hsa-miR-548bb-3p	56067395	56067401	7mer-m8	56067394	56067415	154.00	-11.00
CAediting_640572	chr8_56067400_-	ENSG00000008988.8	ENST00000519807	hsa-miR-548d-3p	56067395	56067401	7mer-m8	56067394	56067415	146.00	-9.81
CAediting_640572	chr8_56067400_-	ENSG00000008988.8	ENST00000519807	hsa-miR-548d-3p	56067395	56067401	7mer-m8	56067394	56067415	146.00	-9.81
CAediting_640572	chr8_56067400_-	ENSG00000008988.8	ENST00000519807	hsa-miR-548h-3p	56067395	56067401	7mer-m8	56067394	56067416	141.00	-12.03
CAediting_640572	chr8_56067400_-	ENSG00000008988.8	ENST00000519807	hsa-miR-548t-3p	56067396	56067402	7mer-m8	56067395	56067419	140.00	-12.27
CAediting_640572	chr8_56067400_-	ENSG00000008988.8	ENST00000519807	hsa-miR-548z	56067395	56067401	7mer-m8	56067394	56067416	141.00	-12.03
CAediting_640572	chr8_56067400_-	ENSG00000008988.8	ENST00000519807	hsa-miR-7153-3p	56067399	56067405	7mer-m8	56067398	56067415	152.00	-17.20
CAediting_640573	chr8_56067416_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3960	56067412	56067418	7mer-m8	56067411	56067430	151.00	-24.29
CAediting_640573	chr8_56067416_-	ENSG00000008988.8	ENST00000519807	hsa-miR-8072	56067412	56067418	7mer-m8	56067411	56067430	140.00	-18.96
CAediting_640574	chr8_56067420_-	ENSG00000008988.8	ENST00000519807	hsa-miR-662	56067419	56067424	6mer	56067418	56067440	153.00	-32.51
CAediting_640574	chr8_56067420_-	ENSG00000008988.8	ENST00000519807	hsa-miR-663b	56067415	56067421	7mer-m8	56067414	56067437	149.00	-31.22
CAediting_640580	chr8_56067492_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6729-3p	56067487	56067493	7mer-m8	56067486	56067506	144.00	-14.61
CAediting_640584	chr8_56067510_-	ENSG00000008988.8	ENST00000519807	hsa-miR-10a-5p	56067508	56067514	7mer-m8	56067507	56067529	145.00	-13.67
CAediting_640584	chr8_56067510_-	ENSG00000008988.8	ENST00000519807	hsa-miR-10b-5p	56067508	56067514	7mer-m8	56067507	56067529	140.00	-13.05
CAediting_640584	chr8_56067510_-	ENSG00000008988.8	ENST00000519807	hsa-miR-339-5p	56067509	56067515	7mer-m8	56067508	56067532	151.00	-18.58
CAediting_640584	chr8_56067510_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4421	56067510	56067516	7mer-m8	56067509	56067530	154.00	-16.19
CAediting_640584	chr8_56067510_-	ENSG00000008988.8	ENST00000519807	hsa-miR-5699-3p	56067510	56067516	7mer-m8	56067509	56067530	153.00	-17.34
CAediting_640584	chr8_56067510_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6732-3p	56067507	56067513	7mer-m8	56067506	56067527	158.00	-19.01
CAediting_640589	chr8_56067551_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4321	56067547	56067554	8mer-1a	56067547	56067565	159.00	-29.26
CAediting_640589	chr8_56067551_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6786-5p	56067551	56067557	7mer-m8	56067550	56067571	151.00	-27.13
CAediting_640592	chr8_56067567_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4323	56067564	56067571	8mer-1a	56067564	56067581	148.00	-20.43
CAediting_640594	chr8_56067577_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6840-3p	56067576	56067582	7mer-m8	56067575	56067597	155.00	-26.67
CAediting_640596	chr8_56067623_-	ENSG00000008988.8	ENST00000519807	hsa-miR-17-3p	56067623	56067629	7mer-m8	56067622	56067643	150.00	-17.66
CAediting_640596	chr8_56067623_-	ENSG00000008988.8	ENST00000519807	hsa-miR-596	56067620	56067626	7mer-m8	56067619	56067639	140.00	-18.43
CAediting_640602	chr8_56067682_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4485-5p	56067678	56067685	8mer-1a	56067678	56067693	140.00	-15.34
CAediting_640602	chr8_56067682_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6078	56067680	56067686	7mer-m8	56067679	56067697	141.00	-18.14
CAediting_640604	chr8_56068326_-	ENSG00000008988.8	ENST00000519807	hsa-miR-665	56068326	56068332	7mer-m8	56068325	56068344	156.00	-24.95
CAediting_640604	chr8_56068326_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6840-3p	56068325	56068331	7mer-m8	56068324	56068345	155.00	-23.82
CAediting_640605	chr8_56068333_-	ENSG00000008988.8	ENST00000519807	hsa-miR-28-5p	56068328	56068334	7mer-m8	56068327	56068347	155.00	-19.39
CAediting_640605	chr8_56068333_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3139	56068328	56068334	7mer-m8	56068327	56068349	165.00	-26.52
CAediting_640605	chr8_56068333_-	ENSG00000008988.8	ENST00000519807	hsa-miR-708-5p	56068328	56068334	7mer-m8	56068327	56068348	154.00	-22.90
CAediting_640613	chr8_56068414_-	ENSG00000008988.8	ENST00000519807	hsa-miR-100-5p	56068411	56068417	7mer-m8	56068410	56068430	152.00	-18.43
CAediting_640613	chr8_56068414_-	ENSG00000008988.8	ENST00000519807	hsa-miR-99a-5p	56068411	56068417	7mer-m8	56068410	56068430	152.00	-17.31
CAediting_640613	chr8_56068414_-	ENSG00000008988.8	ENST00000519807	hsa-miR-99b-5p	56068411	56068417	7mer-m8	56068410	56068431	145.00	-21.26
CAediting_640614	chr8_56068416_-	ENSG00000008988.8	ENST00000519807	hsa-miR-17-3p	56068413	56068419	7mer-m8	56068412	56068434	150.00	-22.27
CAediting_640616	chr8_56068421_-	ENSG00000008988.8	ENST00000519807	hsa-miR-5588-3p	56068416	56068423	8mer-1a	56068416	56068435	148.00	-17.06
CAediting_640616	chr8_56068421_-	ENSG00000008988.8	ENST00000519807	hsa-miR-7977	56068419	56068425	7mer-m8	56068418	56068434	145.00	-12.78
CAediting_640618	chr8_56068429_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6840-3p	56068428	56068434	7mer-m8	56068427	56068448	147.00	-21.75
CAediting_640620	chr8_56068451_-	ENSG00000008988.8	ENST00000519807	hsa-miR-1255b-2-3p	56068450	56068456	7mer-m8	56068449	56068470	140.00	-13.19
CAediting_640620	chr8_56068451_-	ENSG00000008988.8	ENST00000519807	hsa-miR-589-5p	56068446	56068452	7mer-m8	56068445	56068466	160.00	-22.47
CAediting_640623	chr8_56068486_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4537	56068481	56068488	8mer-1a	56068481	56068504	154.00	-21.70
CAediting_640624	chr8_56068499_-	ENSG00000008988.8	ENST00000519807	hsa-miR-324-3p	56068496	56068502	7mer-m8	56068495	56068517	148.00	-24.16
CAediting_640624	chr8_56068499_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4252	56068495	56068501	7mer-m8	56068494	56068514	149.00	-21.82
CAediting_640624	chr8_56068499_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4793-3p	56068499	56068505	7mer-m8	56068498	56068520	157.00	-22.82
CAediting_640624	chr8_56068499_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6807-3p	56068498	56068503	6mer	56068497	56068519	162.00	-32.69
CAediting_640626	chr8_56068516_-	ENSG00000008988.8	ENST00000519807	hsa-miR-1285-3p	56068511	56068516	6mer	56068510	56068530	148.00	-24.48
CAediting_640626	chr8_56068516_-	ENSG00000008988.8	ENST00000519807	hsa-miR-1285-3p	56068511	56068516	6mer	56068510	56068530	148.00	-24.48
CAediting_640626	chr8_56068516_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4486	56068511	56068516	6mer	56068510	56068526	145.00	-17.91
CAediting_640579	chr8_56067489_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6865-3p	56067487	56067493	7mer-m8	56067486	56067506	147.00	-12.75
CAediting_640606	chr8_56068334_-	ENSG00000008988.8	ENST00000519807	hsa-miR-1289	56068329	56068335	7mer-m8	56068328	56068350	150.00	-21.17
CAediting_640606	chr8_56068334_-	ENSG00000008988.8	ENST00000519807	hsa-miR-1289	56068329	56068335	7mer-m8	56068328	56068350	150.00	-21.17

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_640612	chr8_56068403_-	ENSG00000008988.8	ENST00000519807	hsa-miR-141-3p	56068398	56068404	7mer-m8	56068397	56068418	140	-11.82
CAediting_640612	chr8_56068403_-	ENSG00000008988.8	ENST00000519807	hsa-miR-200a-3p	56068398	56068404	7mer-m8	56068397	56068418	140	-13.28
CAediting_640590	chr8_56067562_-	ENSG00000008988.8	ENST00000519807	hsa-miR-20b-3p	56067561	56067567	7mer-m8	56067560	56067582	153	-18.04
CAediting_640591	chr8_56067564_-	ENSG00000008988.8	ENST00000519807	hsa-miR-20b-3p	56067561	56067567	7mer-m8	56067560	56067582	153	-18.04
CAediting_640572	chr8_56067400_-	ENSG00000008988.8	ENST00000519807	hsa-miR-2681-3p	56067399	56067405	7mer-m8	56067398	56067419	140	-14.72
CAediting_640577	chr8_56067443_-	ENSG00000008988.8	ENST00000519807	hsa-miR-30b-3p	56067442	56067449	8mer-1a	56067442	56067463	148	-19.68
CAediting_640582	chr8_56067496_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3143	56067495	56067501	7mer-1a	56067495	56067520	150	-13.63
CAediting_640623	chr8_56068486_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3160-3p	56068481	56068488	8mer-1a	56068481	56068502	153	-19.05
CAediting_640623	chr8_56068486_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3160-3p	56068481	56068488	8mer-1a	56068481	56068502	153	-19.05
CAediting_640610	chr8_56068376_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3163	56068375	56068381	7mer-m8	56068374	56068394	150	-10.16
CAediting_640622	chr8_56068481_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3174	56068479	56068484	6mer	56068478	56068498	146	-25.35
CAediting_640598	chr8_56067629_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3174	56067627	56067632	6mer	56067626	56067648	142	-23.77
CAediting_640607	chr8_56068346_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3190-5p	56068345	56068351	7mer-m8	56068344	56068363	141	-16.06
CAediting_640624	chr8_56068499_-	ENSG00000008988.8	ENST00000519807	hsa-miR-32-5p	56068498	56068504	7mer-m8	56068497	56068519	147	-12.53
CAediting_640625	chr8_56068500_-	ENSG00000008988.8	ENST00000519807	hsa-miR-32-5p	56068498	56068504	7mer-m8	56068497	56068519	147	-12.53
CAediting_640600	chr8_56067648_-	ENSG00000008988.8	ENST00000519807	hsa-miR-324-3p	56067644	56067650	7mer-m8	56067643	56067665	148	-24.15
CAediting_640620	chr8_56068451_-	ENSG00000008988.8	ENST00000519807	hsa-miR-34b-3p	56068449	56068455	7mer-m8	56068448	56068471	148	-11.44
CAediting_640621	chr8_56068456_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3614-5p	56068451	56068457	7mer-1a	56068451	56068474	151	-22.59
CAediting_640624	chr8_56068499_-	ENSG00000008988.8	ENST00000519807	hsa-miR-363-3p	56068498	56068504	7mer-m8	56068497	56068518	147	-16.12
CAediting_640625	chr8_56068500_-	ENSG00000008988.8	ENST00000519807	hsa-miR-363-3p	56068498	56068504	7mer-m8	56068497	56068518	147	-16.12
CAediting_640594	chr8_56067577_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3664-3p	56067576	56067582	7mer-m8	56067575	56067598	154	-20.99
CAediting_640604	chr8_56068326_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3670	56068321	56068328	8mer-1a	56068321	56068344	140	-10.73
CAediting_640604	chr8_56068326_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3670	56068321	56068328	8mer-1a	56068321	56068344	140	-10.73
CAediting_640604	chr8_56068326_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3670	56068321	56068328	8mer-1a	56068321	56068344	140	-10.73
CAediting_640604	chr8_56068326_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3670	56068321	56068328	8mer-1a	56068321	56068344	140	-10.73
CAediting_640609	chr8_56068370_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3675-3p	56068367	56068373	7mer-m8	56068366	56068388	148	-12.58
CAediting_640577	chr8_56067443_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3689a-3p	56067442	56067449	8mer-1a	56067442	56067465	148	-19.68
CAediting_640577	chr8_56067443_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3689b-3p	56067442	56067449	8mer-1a	56067442	56067462	146	-20.21
CAediting_640577	chr8_56067443_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3689c	56067442	56067449	8mer-1a	56067442	56067462	146	-20.21
CAediting_640611	chr8_56068381_-	ENSG00000008988.8	ENST00000519807	hsa-miR-381-3p	56068380	56068385	6mer	56068379	56068400	140	-13.12
CAediting_640619	chr8_56068438_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3929	56068434	56068440	7mer-m8	56068433	56068455	149	-23.39
CAediting_640604	chr8_56068326_-	ENSG00000008988.8	ENST00000519807	hsa-miR-3934-3p	56068324	56068330	7mer-m8	56068323	56068345	145	-18.24
CAediting_640600	chr8_56067648_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4252	56067643	56067649	7mer-m8	56067642	56067662	149	-21.82
CAediting_640574	chr8_56067420_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4284	56067416	56067423	8mer-1a	56067416	56067433	143	-15.61
CAediting_640596	chr8_56067623_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4327	56067621	56067627	7mer-m8	56067620	56067639	147	-17.64
CAediting_640597	chr8_56067624_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4327	56067621	56067627	7mer-m8	56067620	56067639	147	-17.64
CAediting_640619	chr8_56068438_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4329	56068437	56068443	7mer-m8	56068436	56068454	149	-13.99
CAediting_640589	chr8_56067551_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4460	56067547	56067554	8mer-1a	56067547	56067569	145	-12.23
CAediting_640614	chr8_56068416_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4474-5p	56068416	56068422	7mer-m8	56068415	56068437	155	-15.62
CAediting_640615	chr8_56068419_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4474-5p	56068416	56068422	7mer-m8	56068415	56068437	155	-15.62
CAediting_640616	chr8_56068421_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4474-5p	56068416	56068422	7mer-m8	56068415	56068437	155	-15.62
CAediting_640619	chr8_56068438_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4478	56068434	56068440	7mer-m8	56068433	56068451	149	-24.9
CAediting_640596	chr8_56067623_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4538	56067620	56067625	6mer	56067619	56067641	143	-27.8
CAediting_640597	chr8_56067624_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4538	56067620	56067625	6mer	56067619	56067641	143	-27.8
CAediting_640600	chr8_56067648_-	ENSG00000008988.8	ENST00000519807	hsa-miR-4793-3p	56067647	56067653	7mer-m8	56067646	56067668	153	-23.14
CAediting_640579	chr8_56067489_-	ENSG00000008988.8	ENST00000519807	hsa-miR-5196-3p	56067487	56067493	7mer-m8	56067486	56067506	146	-15.84
CAediting_640580	chr8_56067492_-	ENSG00000008988.8	ENST00000519807	hsa-miR-5196-3p	56067487	56067493	7mer-m8	56067486	56067506	146	-15.84
CAediting_640609	chr8_56068370_-	ENSG00000008988.8	ENST00000519807	hsa-miR-519a-2-5p	56068368	56068375	8mer-1a	56068368	56068388	149	-11.12
CAediting_640609	chr8_56068370_-	ENSG00000008988.8	ENST00000519807	hsa-miR-520b-5p	56068368	56068375	8mer-1a	56068368	56068388	149	-11.12
CAediting_640572	chr8_56067400_-	ENSG00000008988.8	ENST00000519807	hsa-miR-548c-3p	56067395	56067401	7mer-m8	56067394	56067415	140	-6.02
CAediting_640612	chr8_56068403_-	ENSG00000008988.8	ENST00000519807	hsa-miR-548q	56068402	56068408	7mer-m8	56068401	56068424	148	-18.14
CAediting_640592	chr8_56067567_-	ENSG00000008988.8	ENST00000519807	hsa-miR-5588-3p	56067564	56067571	8mer-1a	56067564	56067583	148	-17.06
CAediting_640617	chr8_56068426_-	ENSG00000008988.8	ENST00000519807	hsa-miR-5690	56068421	56068428	8mer-1a	56068421	56068441	145	-18.06
CAediting_640593	chr8_56067574_-	ENSG00000008988.8	ENST00000519807	hsa-miR-5690	56067570	56067576	7mer-m8	56067569	56067589	145	-17.72
CAediting_640585	chr8_56067518_-	ENSG00000008988.8	ENST00000519807	hsa-miR-593-3p	56067512	56067518	7mer-1a	56067512	56067530	140	-19.02
CAediting_640588	chr8_56067546_-	ENSG00000008988.8	ENST00000519807	hsa-miR-629-5p	56067543	56067549	7mer-m8	56067542	56067563	152	-19.59
CAediting_640596	chr8_56067623_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6516-5p	56067623	56067629	7mer-m8	56067622	56067644	144	-17.11
CAediting_640597	chr8_56067624_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6516-5p	56067623	56067629	7mer-m8	56067622	56067644	144	-17.11
CAediting_640590	chr8_56067562_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6720-3p	56067557	56067563	7mer-m8	56067556	56067577	152	-20.67
CAediting_640612	chr8_56068403_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6757-3p	56068399	56068405	7mer-m8	56068398	56068415	142	-17.18
CAediting_640577	chr8_56067443_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6779-5p	56067442	56067449	8mer-1a	56067442	56067460	144	-21.14
CAediting_640577	chr8_56067443_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6780a-5p	56067442	56067449	8mer-1a	56067442	56067465	153	-26.11
CAediting_640616	chr8_56068421_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6787-3p	56068419	56068426	8mer-1a	56068419	56068440	151	-19.76
CAediting_640584	chr8_56067510_-	ENSG00000008988.8	ENST00000519807	hsa-miR-6888-3p	56067510	56067516	7mer-m8	56067509	56067529	154	-14.28
CAediting_640623	chr8_56068486_-	ENSG00000008988.8	ENST00000519807	hsa-miR-7160-5p	56068484	56068489	6mer	56068483	56068502	140	-20.08
CAediting_640592	chr8_56067567_-	ENSG00000008988.8	ENST00000519807	hsa-miR-7977	56067567	56067573	7mer-m8	56067566	56067582	145	-12.78
CAediting_640612	chr8_56068403_-	ENSG00000008988.8	ENST00000519807	hsa-miR-7978	56068402	56068407	6mer	56068401	56068423	141	-23.96
CAediting_640576	chr8_56067442_-	ENSG00000008988.8	ENST00000519807	hsa-miR-887-5p	56067441	56067448	8mer-1a	56067441	56067458	150	-17
CAediting_640577	chr8_56067443_-	ENSG00000008988.8	ENST00000519807	hsa-miR-887-5p	56067441	56067448	8mer-1a	56067441	56067458	150	-17
CAediting_640624	chr8_56068499_-	ENSG00000008988.8	ENST00000519807	hsa-miR-92a-3p	56068498	56068504	7mer-m8	56068497	56068514	155	-26.92
CAediting_640625	chr8_56068500_-	ENSG00000008988.8	ENST00000519807	hsa-miR-92a-3p	56068498	56068504	7mer-m8	56068497	56068514	155	-26.92
CAediting_640624	chr8_56068499_-	ENSG00000008988.8	ENST00000519807	hsa-miR-92a-3p	56068498	56068504	7mer-m8	56068497	56068514	155	-26.92
CAediting_640625	chr8_56068500_-	ENSG00000008988.8	ENST00000519807	hsa-miR-92a-3p	56068498	56068504	7mer-m8	56068497	56068514	155	-26.92

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_580943	chr7_100356700_+	ENSG00000008988.8	ENST00000519807	hsa-miR-6840-3p	56067608	56067614	7mer-m8	56067607	56067628	144	-27.77
CAediting_1229413	chr17_67471544_+	ENSG00000008988.8	ENST00000523936	hsa-miR-548aa	56073291	56073297	7mer-m8	56073290	56073318	148	-10.15

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1351755	chr19_40282625_-	ENSG00000008988.8	ENST00000519807	hsa-miR-641	56067740	56067746	7mer-m8	56067739	56067763	155	-10.87
CAediting_580943	chr7_100356700_+	ENSG00000008988.8	ENST00000519807	hsa-miR-6840-3p	56068460	56068466	7mer-m8	56068459	56068480	140	-22.98

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for RPS20

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000519807.4	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_640571	ENST00000519807.4	chr8_56067384_-	-502.00	-500.40	-553.70
CAediting_640572	ENST00000519807.4	chr8_56067400_-	-500.50	-500.40	-553.70
CAediting_640573	ENST00000519807.4	chr8_56067416_-	-500.40	-500.40	-553.70
CAediting_640574	ENST00000519807.4	chr8_56067420_-	-504.50	-500.40	-553.70
CAediting_640575	ENST00000519807.4	chr8_56067429_-	-501.50	-500.40	-553.70
CAediting_640576	ENST00000519807.4	chr8_56067442_-	-503.10	-500.40	-553.70
CAediting_640577	ENST00000519807.4	chr8_56067443_-	-499.70	-500.40	-553.70
CAediting_640578	ENST00000519807.4	chr8_56067472_-	-504.00	-500.40	-553.70
CAediting_640579	ENST00000519807.4	chr8_56067489_-	-499.80	-500.40	-553.70
CAediting_640580	ENST00000519807.4	chr8_56067492_-	-506.30	-500.40	-553.70
CAediting_640581	ENST00000519807.4	chr8_56067495_-	-505.00	-500.40	-553.70
CAediting_640582	ENST00000519807.4	chr8_56067496_-	-499.60	-500.40	-553.70
CAediting_640583	ENST00000519807.4	chr8_56067504_-	-500.00	-500.40	-553.70
CAediting_640584	ENST00000519807.4	chr8_56067510_-	-501.10	-500.40	-553.70
CAediting_640585	ENST00000519807.4	chr8_56067518_-	-502.40	-500.40	-553.70
CAediting_640586	ENST00000519807.4	chr8_56067527_-	-500.80	-500.40	-553.70
CAediting_640587	ENST00000519807.4	chr8_56067538_-	-502.30	-500.40	-553.70
CAediting_640588	ENST00000519807.4	chr8_56067546_-	-500.60	-500.40	-553.70
CAediting_640589	ENST00000519807.4	chr8_56067551_-	-500.60	-500.40	-553.70
CAediting_640590	ENST00000519807.4	chr8_56067562_-	-500.80	-500.40	-553.70
CAediting_640591	ENST00000519807.4	chr8_56067564_-	-499.40	-500.40	-553.70
CAediting_640592	ENST00000519807.4	chr8_56067567_-	-500.00	-500.40	-553.70
CAediting_640593	ENST00000519807.4	chr8_56067574_-	-499.40	-500.40	-553.70
CAediting_640594	ENST00000519807.4	chr8_56067577_-	-499.50	-500.40	-553.70
CAediting_640595	ENST00000519807.4	chr8_56067604_-	-500.70	-500.40	-553.70
CAediting_640596	ENST00000519807.4	chr8_56067623_-	-500.40	-500.40	-553.70
CAediting_640597	ENST00000519807.4	chr8_56067624_-	-500.40	-500.40	-553.70
CAediting_640598	ENST00000519807.4	chr8_56067629_-	-500.00	-500.40	-553.70
CAediting_640599	ENST00000519807.4	chr8_56067639_-	-500.40	-500.40	-553.70
CAediting_640600	ENST00000519807.4	chr8_56067648_-	-499.70	-500.40	-553.70
CAediting_640601	ENST00000519807.4	chr8_56067678_-	-499.50	-500.40	-553.70
CAediting_640602	ENST00000519807.4	chr8_56067682_-	-499.80	-500.40	-553.70
CAediting_640603	ENST00000519807.4	chr8_56067684_-	-500.60	-500.40	-553.70
CAediting_640604	ENST00000519807.4	chr8_56068326_-	-501.40	-500.40	-553.70
CAediting_640605	ENST00000519807.4	chr8_56068333_-	-502.40	-500.40	-553.70
CAediting_640606	ENST00000519807.4	chr8_56068334_-	-500.80	-500.40	-553.70
CAediting_640607	ENST00000519807.4	chr8_56068346_-	-499.10	-500.40	-553.70
CAediting_640608	ENST00000519807.4	chr8_56068360_-	-503.40	-500.40	-553.70
CAediting_640609	ENST00000519807.4	chr8_56068370_-	-499.50	-500.40	-553.70
CAediting_640610	ENST00000519807.4	chr8_56068376_-	-503.10	-500.40	-553.70
CAediting_640611	ENST00000519807.4	chr8_56068381_-	-504.40	-500.40	-553.70
CAediting_640612	ENST00000519807.4	chr8_56068403_-	-500.80	-500.40	-553.70
CAediting_640613	ENST00000519807.4	chr8_56068414_-	-503.20	-500.40	-553.70
CAediting_640614	ENST00000519807.4	chr8_56068416_-	-500.40	-500.40	-553.70
CAediting_640615	ENST00000519807.4	chr8_56068419_-	-502.00	-500.40	-553.70
CAediting_640616	ENST00000519807.4	chr8_56068421_-	-502.80	-500.40	-553.70
CAediting_640617	ENST00000519807.4	chr8_56068426_-	-504.70	-500.40	-553.70
CAediting_640618	ENST00000519807.4	chr8_56068429_-	-502.20	-500.40	-553.70
CAediting_640619	ENST00000519807.4	chr8_56068438_-	-499.70	-500.40	-553.70
CAediting_640620	ENST00000519807.4	chr8_56068451_-	-501.90	-500.40	-553.70
CAediting_640621	ENST00000519807.4	chr8_56068456_-	-500.30	-500.40	-553.70
CAediting_640622	ENST00000519807.4	chr8_56068481_-	-503.30	-500.40	-553.70
CAediting_640623	ENST00000519807.4	chr8_56068486_-	-503.30	-500.40	-553.70
CAediting_640624	ENST00000519807.4	chr8_56068499_-	-505.90	-500.40	-553.70
CAediting_640625	ENST00000519807.4	chr8_56068500_-	-500.60	-500.40	-553.70
CAediting_640626	ENST00000519807.4	chr8_56068516_-	-500.00	-500.40	-553.70

Top

Relation with ADAR for RPS20

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_640575	chr8_56067429_-	0.0179116983062036	0.330331842023059	.	.	.	.
LGG	CAediting_640575	chr8_56067429_-	1.58922402302757e-18	0.405038079703302	.	.	.	.
BRCA	CAediting_640575	chr8_56067429_-	4.69473988768782e-09	0.305791163456458	.	.	.	.
GBM	CAediting_640575	chr8_56067429_-	8.39749903638826e-05	0.314497582364236	.	.	.	.
PRAD	CAediting_640575	chr8_56067429_-	7.51861630579113e-06	0.299436618302397	.	.	.	.
STAD	CAediting_640575	chr8_56067429_-	0.0019582990667617	0.245299627235834	.	.	.	.
THCA	CAediting_640575	chr8_56067429_-	0.000216890504509116	0.203167570659239	.	.	.	.
UCEC	CAediting_640575	chr8_56067429_-	2.81568867206539e-05	0.271241059099861	.	.	.	.
PCPG	CAediting_640575	chr8_56067429_-	2.52378218335487e-05	0.319785910573215	.	.	.	.
SKCM	CAediting_640575	chr8_56067429_-	0.0240595728831605	0.192014273114852	.	.	.	.
UVM	CAediting_640575	chr8_56067429_-	0.00348389767238216	0.359951329316039	.	.	.	.
SARC	CAediting_640575	chr8_56067429_-	0.000242768704357813	0.320189059793716	.	.	.	.
THYM	CAediting_640575	chr8_56067429_-	0.0476620862864371	0.211735400592916	0.0108824923498872	0.270245479761376	.	.
LGG	CAediting_640576	chr8_56067442_-	3.47444121061341e-09	0.32456669735198	.	.	.	.
BRCA	CAediting_640576	chr8_56067442_-	4.67886961548604e-05	0.246000583676796	.	.	.	.
GBM	CAediting_640576	chr8_56067442_-	0.000306001929794908	0.3038941091576	.	.	.	.
THCA	CAediting_640576	chr8_56067442_-	1.49908495375443e-07	0.305035312736582	.	.	.	.
UCEC	CAediting_640576	chr8_56067442_-	0.00567398614221777	0.18304599648103	.	.	.	.
PCPG	CAediting_640576	chr8_56067442_-	9.40107940540888e-06	0.352988049654582	.	.	.	.
SKCM	CAediting_640576	chr8_56067442_-	0.0277663295230259	0.203494123472241	.	.	.	.
SARC	CAediting_640576	chr8_56067442_-	0.0332441766470558	0.205078333676769	.	.	.	.
THYM	CAediting_640576	chr8_56067442_-	0.0100559112661336	0.310143578220279	.	.	0.0331578904480578	0.258701725662242
BLCA	CAediting_640582	chr8_56067496_-	0.0213331796935108	0.262025446537585	.	.	.	.
LGG	CAediting_640582	chr8_56067496_-	9.4512132833457e-11	0.314909784938253	.	.	.	.
BRCA	CAediting_640582	chr8_56067496_-	1.16471893682138e-06	0.234327156877916	.	.	.	.
LUSC	CAediting_640582	chr8_56067496_-	0.0329666617625622	0.251660644053497	.	.	.	.
GBM	CAediting_640582	chr8_56067496_-	0.00211091754659773	0.257721484945304	.	.	.	.
PRAD	CAediting_640582	chr8_56067496_-	0.00196935965384115	0.17711680383789	.	.	.	.
UCEC	CAediting_640582	chr8_56067496_-	0.0249987865335367	0.149420481348153	.	.	.	.
OV	CAediting_640582	chr8_56067496_-	0.0355551732288185	0.127283666797997	.	.	.	.
PCPG	CAediting_640582	chr8_56067496_-	0.0335946707423578	0.163083195475851	.	.	.	.
SKCM	CAediting_640582	chr8_56067496_-	0.0240022309581543	0.179528753868465	.	.	.	.
THYM	CAediting_640582	chr8_56067496_-	.	.	7.40853472290923e-05	0.409598524989647	.	.
BRCA	CAediting_640585	chr8_56067518_-	0.0320257399030169	0.258436948518744	.	.	.	.
LGG	CAediting_640586	chr8_56067527_-	9.84855010300363e-06	0.459204612900858	.	.	.	.
BRCA	CAediting_640586	chr8_56067527_-	0.00522064876267485	0.191637523441408	.	.	.	.
THCA	CAediting_640586	chr8_56067527_-	0.000248790709929773	0.266977449491336	.	.	.	.
OV	CAediting_640586	chr8_56067527_-	0.0073322637595961	0.222576739898828	.	.	.	.
PCPG	CAediting_640586	chr8_56067527_-	0.0174665417804743	0.285361759202957	.	.	.	.
SKCM	CAediting_640586	chr8_56067527_-	0.0073153671000652	0.294125523846188	.	.	.	.
SARC	CAediting_640586	chr8_56067527_-	0.0149074918651651	0.258793718840139	.	.	.	.
LGG	CAediting_640587	chr8_56067538_-	3.13721580575192e-07	0.320425771025223	.	.	.	.
BRCA	CAediting_640587	chr8_56067538_-	0.00482253736411182	0.183674593933211	.	.	.	.
CESC	CAediting_640587	chr8_56067538_-	.	.	.	.	0.0271271706744734	0.309450671996328
STAD	CAediting_640587	chr8_56067538_-	0.0166990309450484	0.295908847931103	.	.	.	.
THCA	CAediting_640587	chr8_56067538_-	1.1223149718863e-08	0.34121335498378	.	.	.	.
PCPG	CAediting_640587	chr8_56067538_-	0.0351083758639797	0.212050578152892	.	.	.	.
THYM	CAediting_640587	chr8_56067538_-	0.0113031513175627	0.336177968393621	.	.	0.0242558469737573	0.300849793615481
THCA	CAediting_640591	chr8_56067564_-	0.0075957323496966	0.335952486616065	.	.	.	.
OV	CAediting_640591	chr8_56067564_-	0.0345211994265401	0.208540944898661	.	.	.	.
BLCA	CAediting_640593	chr8_56067574_-	0.00152256191845647	0.304206045159435	.	.	.	.
LGG	CAediting_640593	chr8_56067574_-	4.7203787934919e-06	0.20069882625897	.	.	.	.
BRCA	CAediting_640593	chr8_56067574_-	0.00305635024180446	0.14420505289119	.	.	.	.
THCA	CAediting_640593	chr8_56067574_-	0.00529546215263886	0.134254377663824	.	.	.	.
PCPG	CAediting_640593	chr8_56067574_-	0.00241440458977205	0.227945421002859	.	.	.	.
THYM	CAediting_640593	chr8_56067574_-	.	.	0.0431438578327382	0.205799305917902	.	.
THCA	CAediting_640603	chr8_56067684_-	0.0262678435418152	0.284505015014431	.	.	.	.
LGG	CAediting_640607	chr8_56068346_-	1.23227189319395e-07	0.362525329321498	.	.	.	.
BRCA	CAediting_640607	chr8_56068346_-	3.96792492297073e-08	0.43954842519814	.	.	.	.
PRAD	CAediting_640607	chr8_56068346_-	0.000547074131058933	0.423298364823803	.	.	.	.
GBM	CAediting_640608	chr8_56068360_-	0.0159992753466083	0.250554270700152	.	.	.	.
OV	CAediting_640608	chr8_56068360_-	0.00349185836527584	0.215436841459546	.	.	.	.
LGG	CAediting_640610	chr8_56068376_-	6.34545445586077e-12	0.432076578725628	.	.	.	.
BRCA	CAediting_640610	chr8_56068376_-	5.56722276836808e-05	0.255564117020615	.	.	.	.
THCA	CAediting_640610	chr8_56068376_-	0.00110791582064979	0.301651370982785	.	.	.	.
OV	CAediting_640616	chr8_56068421_-	0.0116503340854262	0.264837312246087	.	.	.	.
LGG	CAediting_640617	chr8_56068426_-	9.32016587104839e-06	0.192641467516413	1.9445144061867e-05	0.18575977964199	.	.
BRCA	CAediting_640617	chr8_56068426_-	.	.	6.4470197560883e-05	0.189519428366068	.	.
GBM	CAediting_640617	chr8_56068426_-	4.14600677054593e-05	0.317152251467807	.	.	.	.
PRAD	CAediting_640617	chr8_56068426_-	.	.	0.00321628160927794	0.177388137258564	.	.
STAD	CAediting_640617	chr8_56068426_-	.	.	0.0173522886517951	0.177654242013127	.	.
UCEC	CAediting_640617	chr8_56068426_-	0.00661994889813913	0.287435009958868	.	.	.	.
KIRP	CAediting_640617	chr8_56068426_-	.	.	0.00085026107000177	0.331641118709242	.	.
PCPG	CAediting_640617	chr8_56068426_-	.	.	0.0043839846277112	0.234513448143252	.	.
SKCM	CAediting_640617	chr8_56068426_-	.	.	1.39355404105766e-05	0.324642798697607	.	.
UVM	CAediting_640617	chr8_56068426_-	.	.	0.00972270215710417	0.355399714923247	.	.
SARC	CAediting_640617	chr8_56068426_-	0.0103394098522425	0.242490355417955	0.00015606046050521	0.351361859255029	.	.
THYM	CAediting_640617	chr8_56068426_-	.	.	.	.	0.0158654491791448	0.315445155339547
LGG	CAediting_640619	chr8_56068438_-	0.0290420880237121	0.0955539426000318	.	.	.	.
BRCA	CAediting_640619	chr8_56068438_-	0.038987228173579	0.103005746891021	.	.	.	.
PRAD	CAediting_640619	chr8_56068438_-	0.0476356715056852	0.136847813361279	.	.	.	.
SARC	CAediting_640619	chr8_56068438_-	.	.	0.00255458020292114	0.307690276424991	.	.
STAD	CAediting_640621	chr8_56068456_-	0.0322126295145382	0.256311538989412	.	.	.	.
LGG	CAediting_640647	chr8_56068901_-	0.000281466708772959	0.211756862703103	.	.	.	.
BRCA	CAediting_640647	chr8_56068901_-	0.0391588969186901	0.200665801559514	.	.	.	.
PRAD	CAediting_640647	chr8_56068901_-	0.0194033103306957	0.209714617989846	.	.	.	.
THCA	CAediting_640647	chr8_56068901_-	0.0305688304883445	0.187627083312047	.	.	.	.
ESCA	CAediting_640647	chr8_56068901_-	.	.	0.0077772205676221	0.277348398314963	.	.
LGG	CAediting_640648	chr8_56068904_-	0.00153846977178188	0.176633318582573	0.0343445628450102	0.118520797630505	.	.
UCEC	CAediting_640648	chr8_56068904_-	.	.	.	.	0.0330058419941553	0.248174949534172
ESCA	CAediting_640648	chr8_56068904_-	.	.	0.0029120318157304	0.345979537614983	.	.
PCPG	CAediting_640648	chr8_56068904_-	.	.	0.0109659349639433	0.234403377402137	.	.
SARC	CAediting_640648	chr8_56068904_-	0.00874781758039542	0.306854621735225	0.0252510992515261	0.263626744468149	.	.
LGG	CAediting_640650	chr8_56068907_-	0.000886305354228978	0.178188317294068	0.0268048544367681	0.119223659029034	.	.
BRCA	CAediting_640650	chr8_56068907_-	0.00932562943235343	0.215234516895812	.	.	.	.
PRAD	CAediting_640650	chr8_56068907_-	.	.	0.00856816573543322	0.238009594888859	.	.
STAD	CAediting_640650	chr8_56068907_-	.	.	0.0128477007504113	0.189366582262036	.	.
UCEC	CAediting_640650	chr8_56068907_-	.	.	0.00668118189029462	0.341014882971321	0.0335078870375413	0.270445555260148
ESCA	CAediting_640650	chr8_56068907_-	.	.	2.1830345583424e-05	0.466288163804967	.	.
LGG	CAediting_640652	chr8_56068914_-	1.84574671211612e-05	0.185729712291731	.	.	0.045496329235302	0.0873300772299419
BRCA	CAediting_640652	chr8_56068914_-	1.82558381054674e-05	0.224679615730058	.	.	.	.
LUSC	CAediting_640652	chr8_56068914_-	0.00697726227937404	0.309054552207751	.	.	.	.
GBM	CAediting_640652	chr8_56068914_-	0.0245151324119427	0.181790612193255	.	.	.	.
PRAD	CAediting_640652	chr8_56068914_-	0.000847333803621561	0.190722779961871	.	.	.	.
THCA	CAediting_640652	chr8_56068914_-	0.0239798939220452	0.125017965480608	.	.	.	.
UCEC	CAediting_640652	chr8_56068914_-	0.0404421142736081	0.145774754995249	.	.	.	.
PCPG	CAediting_640652	chr8_56068914_-	0.000499068958889568	0.272138189929421	.	.	.	.
SKCM	CAediting_640652	chr8_56068914_-	5.14227569501668e-05	0.297029037140291	.	.	.	.
THYM	CAediting_640652	chr8_56068914_-	.	.	.	.	0.000694936641808593	0.364883629797175
LGG	CAediting_640654	chr8_56068927_-	8.82829419339454e-06	0.225188101020313	0.000333413248883317	0.182622905763245	.	.
GBM	CAediting_640654	chr8_56068927_-	0.0148715967997563	0.220054409410832	.	.	.	.
PRAD	CAediting_640654	chr8_56068927_-	0.000801543220293615	0.292656861209525	.	.	.	.
STAD	CAediting_640654	chr8_56068927_-	.	.	3.72336765272665e-06	0.293550900272546	.	.
UCEC	CAediting_640654	chr8_56068927_-	0.00491766099028429	0.25409795680759	0.0220329075163441	0.208040042548519	.	.
ESCA	CAediting_640654	chr8_56068927_-	.	.	0.000793745954117525	0.309865129921809	.	.
OV	CAediting_640654	chr8_56068927_-	0.0110928133075193	0.163012556845964	.	.	.	.
PCPG	CAediting_640654	chr8_56068927_-	0.023473825260338	0.20504709576543	.	.	.	.
SKCM	CAediting_640654	chr8_56068927_-	0.016599208788616	0.285467770961148	0.0078687498564351	0.315184653172085	.	.
SARC	CAediting_640654	chr8_56068927_-	0.00887242486133279	0.315064133443552	0.000877716988007233	0.394294614106457	.	.
STAD	CAediting_640655	chr8_56068931_-	0.0054575254748565	0.354458575970228	.	.	.	.
STAD	CAediting_640657	chr8_56068963_-	.	.	0.0286516555965582	0.300753420809699	.	.
LGG	CAediting_640660	chr8_56068968_-	0.00267152239792669	0.270711722889076	.	.	.	.
LGG	CAediting_640661	chr8_56068973_-	5.05435019985548e-14	0.338664416331866	.	.	.	.
BRCA	CAediting_640661	chr8_56068973_-	1.49659202845726e-06	0.346058906846827	.	.	.	.
GBM	CAediting_640661	chr8_56068973_-	0.00194740643561557	0.261504682772062	.	.	.	.
STAD	CAediting_640661	chr8_56068973_-	6.19059539783009e-05	0.270892129810065	0.0386962913285137	0.141773995248908	.	.
THCA	CAediting_640661	chr8_56068973_-	0.00117590734416416	0.251967370807313	.	.	.	.
UCEC	CAediting_640661	chr8_56068973_-	0.000904652333269706	0.373014638380466	.	.	0.00457356283180566	0.321898266246258
ESCA	CAediting_640661	chr8_56068973_-	0.0419569900953821	0.1960938871799	.	.	.	.
OV	CAediting_640661	chr8_56068973_-	1.23438214178725e-05	0.287496585292208	.	.	.	.
PCPG	CAediting_640661	chr8_56068973_-	0.000823318007170442	0.288756085411481	.	.	.	.
SARC	CAediting_640661	chr8_56068973_-	0.00725189683911388	0.325183675553824	.	.	.	.
LGG	CAediting_640664	chr8_56068976_-	0.000165492446008101	0.322120700173079	.	.	.	.
BRCA	CAediting_640664	chr8_56068976_-	0.0175776828880926	0.308149819208705	.	.	0.0415331747207574	0.266233214576782
PCPG	CAediting_640664	chr8_56068976_-	0.0191508992855881	0.28557816833131	.	.	.	.
LGG	CAediting_640665	chr8_56068977_-	0.00314317979461164	0.405670214327586	.	.	.	.
LGG	CAediting_640666	chr8_56068991_-	.	.	8.42696070485497e-06	0.292692392464829	.	.
BRCA	CAediting_640666	chr8_56068991_-	0.000484618234249538	0.318908504423023	.	.	.	.
GBM	CAediting_640666	chr8_56068991_-	0.0319328236211826	0.182078128395691	.	.	.	.
PRAD	CAediting_640666	chr8_56068991_-	0.0211994761567003	0.265750133347419	.	.	.	.
STAD	CAediting_640666	chr8_56068991_-	.	.	0.00246979392879346	0.2017494371391	.	.
ESCA	CAediting_640666	chr8_56068991_-	.	.	0.0189214942891769	0.220520652197989	.	.
OV	CAediting_640666	chr8_56068991_-	0.00658874048768187	0.179457408097029	.	.	.	.
PCPG	CAediting_640666	chr8_56068991_-	.	.	0.00411284444736301	0.304685853719403	.	.
STAD	CAediting_640670	chr8_56069001_-	0.0036224894995311	0.216985226599751	.	.	.	.
STAD	CAediting_640671	chr8_56069002_-	.	.	.	.	0.04623032733304	0.203966568509685
LGG	CAediting_640673	chr8_56069011_-	0.0115816813449399	0.338098135381243	.	.	.	.
GBM	CAediting_640673	chr8_56069011_-	0.0277250784581855	0.289116331077641	.	.	.	.
STAD	CAediting_640673	chr8_56069011_-	0.0362104444916227	0.186075173978124	.	.	.	.
ESCA	CAediting_640673	chr8_56069011_-	0.00504130896224547	0.327081023824891	0.0358052768331974	0.24784867526722	0.0235207832313829	0.266729804707688
OV	CAediting_640673	chr8_56069011_-	0.0208060629843391	0.180944924330863	.	.	.	.
LGG	CAediting_640677	chr8_56069025_-	2.10702976193561e-14	0.59356578613711	.	.	.	.
BRCA	CAediting_640677	chr8_56069025_-	0.000468171626488197	0.302524107950676	.	.	.	.
GBM	CAediting_640677	chr8_56069025_-	0.000471777373947828	0.421450028429113	.	.	.	.
THCA	CAediting_640677	chr8_56069025_-	0.0319264670694628	0.192023832222346	.	.	.	.
OV	CAediting_640677	chr8_56069025_-	0.00764663526812441	0.195008332274673	.	.	.	.
PCPG	CAediting_640677	chr8_56069025_-	0.0437415062085606	0.278135904418252	.	.	.	.
LGG	CAediting_640678	chr8_56069030_-	8.15361239130638e-07	0.377156574461649	.	.	.	.
BRCA	CAediting_640678	chr8_56069030_-	2.6970276798823e-06	0.323270581640215	.	.	.	.
GBM	CAediting_640678	chr8_56069030_-	0.000274153240170275	0.356318407587266	.	.	.	.
PRAD	CAediting_640678	chr8_56069030_-	0.00118948534398309	0.37207807090026	.	.	.	.
STAD	CAediting_640678	chr8_56069030_-	0.0209122055905603	0.1697192175555	.	.	.	.
ESCA	CAediting_640678	chr8_56069030_-	0.000907576267319791	0.340170218401447	.	.	.	.
OV	CAediting_640678	chr8_56069030_-	0.000255032384533858	0.25341669729187	.	.	.	.
LGG	CAediting_640688	chr8_56069271_-	0.00331205819122978	0.251065357359326	.	.	.	.
OV	CAediting_640688	chr8_56069271_-	0.0187998817108597	0.163586862042713	.	.	.	.
LGG	CAediting_640699	chr8_56069384_-	1.90425520216781e-06	0.262219477202365	.	.	.	.
BRCA	CAediting_640699	chr8_56069384_-	0.000101064262236627	0.244854717174819	.	.	.	.
PCPG	CAediting_640699	chr8_56069384_-	0.0156378006456046	0.26459429288034	.	.	.	.
LGG	CAediting_640701	chr8_56069395_-	1.99331259614494e-08	0.367977576433884	.	.	.	.
BRCA	CAediting_640701	chr8_56069395_-	0.0214264818344306	0.182338867986731	.	.	.	.
GBM	CAediting_640701	chr8_56069395_-	0.00753432310700762	0.247993014086856	.	.	.	.
LGG	CAediting_640706	chr8_56069413_-	2.44400200488536e-08	0.372272880729075	.	.	.	.
GBM	CAediting_640706	chr8_56069413_-	0.00495786598073308	0.237902476105159	.	.	.	.
LGG	CAediting_640710	chr8_56069436_-	5.58981675161603e-05	0.231222910406392	.	.	.	.
LGG	CAediting_640714	chr8_56069463_-	0.00132725584155631	0.255607141769657	.	.	.	.
GBM	CAediting_640737	chr8_56069563_-	0.0120557817063863	0.305098061289658	.	.	.	.
LGG	CAediting_640739	chr8_56069571_-	6.23527388587016e-09	0.287433247813293	.	.	.	.
PCPG	CAediting_640739	chr8_56069571_-	0.0406732578653015	0.222514561348281	.	.	.	.
LGG	CAediting_640740	chr8_56069578_-	2.56185245778262e-07	0.233773376959086	.	.	.	.
BRCA	CAediting_640740	chr8_56069578_-	0.00031819854181227	0.359755522527787	.	.	.	.
PRAD	CAediting_640740	chr8_56069578_-	.	.	.	.	0.0313077275683292	0.288092337417078
STAD	CAediting_640740	chr8_56069578_-	0.0271602849494662	0.23291385707048	.	.	.	.
PCPG	CAediting_640740	chr8_56069578_-	6.94739555383259e-06	0.442973533753318	.	.	.	.
KIRC	CAediting_640749	chr8_56070510_-	.	.	.	.	0.0219619332762421	0.32341848616618
BRCA	CAediting_640755	chr8_56070553_-	0.0152079609525947	0.234142818667952	.	.	.	.
OV	CAediting_640755	chr8_56070553_-	0.0147309739300896	0.263741793534367	.	.	.	.
LGG	CAediting_640793	chr8_56072427_-	0.00193273977245106	0.184842579632755	.	.	.	.
BRCA	CAediting_640793	chr8_56072427_-	0.00268567623048699	0.300038419475057	.	.	.	.

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Relation with cancer stages for RPS20

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_640575	chr8_56067429_-	0.0436672428813582	0.283675063617554
BRCA	pathologic_stage	CAediting_640706	chr8_56069413_-	0.0138937168195221	-0.297058644374207
CESC	clinical_stage	CAediting_640593	chr8_56067574_-	0.0402750456181778	0.232778399774379
ESCA	clinical_stage	CAediting_640582	chr8_56067496_-	0.0214739960289351	-0.48716493469506
ESCA	clinical_stage	CAediting_640664	chr8_56068976_-	0.0239665512724729	-0.433281727559005
ESCA	clinical_stage	CAediting_640678	chr8_56069030_-	0.0462247650630311	-0.394314418567699
ESCA	clinical_stage	CAediting_640706	chr8_56069413_-	0.0439817812578129	-0.383451087980441
ESCA	clinical_stage	CAediting_640740	chr8_56069578_-	0.0430053144993294	-0.456583854618263
ESCA	pathologic_stage	CAediting_640607	chr8_56068346_-	0.00963697402113003	0.366303559225154
ESCA	pathologic_stage	CAediting_640678	chr8_56069030_-	0.0241347090500564	0.247406605920653
ESCA	pathologic_stage	CAediting_640701	chr8_56069395_-	0.042509030078755	0.246748887462842
KIRC	pathologic_stage	CAediting_640576	chr8_56067442_-	0.00734666577422829	0.190453144320115
KIRC	pathologic_stage	CAediting_640582	chr8_56067496_-	0.0220522437246739	0.13149831464468
KIRC	pathologic_stage	CAediting_640650	chr8_56068907_-	0.0375339625755714	0.19092253002255
KIRC	pathologic_stage	CAediting_640652	chr8_56068914_-	0.000751139903963475	0.228661387612926
KIRC	pathologic_stage	CAediting_640688	chr8_56069271_-	0.00281343126809696	0.264032367967072
KIRC	pathologic_stage	CAediting_640701	chr8_56069395_-	0.0264331616291324	0.202651707679794
LUSC	pathologic_stage	CAediting_640699	chr8_56069384_-	0.0140488477220743	-0.348768018615495
OV	clinical_stage	CAediting_640575	chr8_56067429_-	0.0211951236583192	0.136228126190987
SKCM	pathologic_stage	CAediting_640576	chr8_56067442_-	0.0174964009740793	-0.242062973576857
STAD	pathologic_stage	CAediting_640608	chr8_56068360_-	0.0457467272967242	0.196354625286627
STAD	pathologic_stage	CAediting_640657	chr8_56068963_-	0.0193696817479249	0.323364610696613
STAD	pathologic_stage	CAediting_640673	chr8_56069011_-	0.045208279789676	-0.180932540614157
THCA	pathologic_stage	CAediting_640593	chr8_56067574_-	0.0309540665552392	0.104806030579601
THCA	pathologic_stage	CAediting_640603	chr8_56067684_-	0.000329058732239464	0.451722767165518
THCA	pathologic_stage	CAediting_640619	chr8_56068438_-	0.0272606370389346	0.130789286306083
THCA	pathologic_stage	CAediting_640650	chr8_56068907_-	0.00739627119119858	0.20781577487058
THCA	pathologic_stage	CAediting_640699	chr8_56069384_-	0.0017021098946324	0.247696250386427

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Relation with survival for RPS20

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_640664	chr8_56068976_-	0.0367466763264152	0.00217869	1146040
LGG	CAediting_640688	chr8_56069271_-	0.00384357582003914	0.00240972	618481
LGG	CAediting_640706	chr8_56069413_-	7.04395498106747e-05	0.0206564	28.1151
LGG	CAediting_640793	chr8_56072427_-	0.00437682196428324	0.0225554	62.3097
LUSC	CAediting_640582	chr8_56067496_-	0.0190673251132929	0.0434565	0.0287562
GBM	CAediting_640666	chr8_56068991_-	0.02943843218014	0.00246468	19.303
STAD	CAediting_640621	chr8_56068456_-	0.0346719897903307	0.00760242	6664.95
STAD	CAediting_640661	chr8_56068973_-	0.00826065911270024	0.022998	6.27512
STAD	CAediting_640666	chr8_56068991_-	0.0364180773788272	0.00792928	7.64964
UCEC	CAediting_640575	chr8_56067429_-	0.0252599791923998	0.0417557	13.3081
UCEC	CAediting_640648	chr8_56068904_-	0.00507280228257467	0.0121503	59862700
UCEC	CAediting_640678	chr8_56069030_-	0.0496409762924865	0.00762269	828.271
ESCA	CAediting_640576	chr8_56067442_-	0.0253069681007436	0.0197251	0.00207495
ESCA	CAediting_640607	chr8_56068346_-	0.0409871919038974	0.00233351	21308800
ESCA	CAediting_640647	chr8_56068901_-	0.0243139630573164	0.022483	0.00746466
ESCA	CAediting_640661	chr8_56068973_-	0.0292894187126097	0.0194965	0.0261467
OV	CAediting_640647	chr8_56068901_-	0.00535822513133499	0.0122871	23.4267
THYM	CAediting_640593	chr8_56067574_-	0.00672717258553024	0.0460239	1296980

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RelatedDrugs for RPS20

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for RPS20

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
RPS20	C0009405	Hereditary Nonpolyposis Colorectal Neoplasms	2	CLINGEN
RPS20	C1112155	Hereditary non-polyposis colorectal cancer syndrome	2	CLINGEN
RPS20	C1333990	Hereditary Nonpolyposis Colorectal Cancer	2	CLINGEN
RPS20	C1333991	Hereditary Non-Polyposis Colon Cancer Type 2	2	CLINGEN
RPS20	C2936783	Colorectal cancer, hereditary nonpolyposis, type 1	2	CLINGEN
RPS20	C3896578	Familial Colorectal Cancer Type X	1	ORPHANET

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene