Home

Download

Statistics

Examples

Help

Contact

Editing gene: RPS15A (CAeditome ID:6210)

Gene summary for RPS15A

Gene summary

Gene information	Gene symbol	RPS15A
	Gene ID	6210
	Gene name	ribosomal protein S15a
	Synonyms	DBA20\|S15a
	Cytomap	16p12.3
	Type of gene	protein-coding
	Description	40S ribosomal protein S15asmall ribosomal subunit protein uS8up-regulated by HBV X protein
	Modification date	20210518
	UniProtAcc	P62244
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
RPS15A	GO:0003735	40S ribosomal protein S15a	23636399
RPS15A	GO:0008284	40S ribosomal protein S15a	15108328
RPS15A	GO:0009615	40S ribosomal protein S15a	15108328
RPS15A	GO:0045787	40S ribosomal protein S15a	15108328
RPS15A	GO:0005737	40S ribosomal protein S15a	15108328
RPS15A	GO:0022626	40S ribosomal protein S15a	23636399
RPS15A	GO:0022627	40S ribosomal protein S15a	8706699

Top

RNA A-to-I events for RPS15A

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000134419.14

RNA A-to-I editing events in Cancer.

CAediting_1095401(18782270, -), CAediting_1095402(18782493, -), CAediting_1095403(18782505, -), CAediting_1095404(18782531, -), CAediting_1095405(18782551, -), CAediting_1095406(18782560, -), CAediting_1095407(18782567, -), CAediting_1095408(18782582, -), CAediting_1095409(18782609, -), CAediting_1095410(18782610, -), CAediting_1095411(18782622, -), CAediting_1095412(18782639, -), CAediting_1095413(18782653, -), CAediting_1095414(18782660, -), CAediting_1095415(18782665, -), CAediting_1095416(18784123, -), CAediting_1095417(18784143, -), CAediting_1095418(18784157, -), CAediting_1095419(18784248, -), CAediting_1095420(18784297, -), CAediting_1095421(18784317, -), CAediting_1095422(18784344, -), CAediting_1095423(18784355, -), CAediting_1095424(18784359, -), CAediting_1095425(18784392, -), CAediting_1095426(18784394, -), CAediting_1095427(18784408, -), CAediting_1095428(18784412, -), CAediting_1095429(18784416, -), CAediting_1095430(18784453, -), CAediting_1095431(18784483, -), CAediting_1095432(18784492, -), CAediting_1095433(18784496, -), CAediting_1095434(18784527, -), CAediting_1095435(18784535, -), CAediting_1095436(18784541, -), CAediting_1095437(18784551, -), CAediting_1095438(18786197, -), CAediting_1095439(18786199, -), CAediting_1095440(18786216, -), CAediting_1095441(18786217, -), CAediting_1095442(18786241, -), CAediting_1095443(18786243, -), CAediting_1095444(18786253, -), CAediting_1095445(18786265, -), CAediting_1095446(18786282, -), CAediting_1095447(18786283, -), CAediting_1095448(18786289, -), CAediting_1095449(18786303, -), CAediting_1095450(18786308, -), CAediting_1095451(18786320, -), CAediting_1095452(18786331, -), CAediting_1095453(18786338, -), CAediting_1095454(18786348, -), CAediting_1095455(18786661, -), CAediting_1095456(18786670, -), CAediting_1095457(18786687, -), CAediting_1095458(18786699, -), CAediting_1095459(18786937, -), CAediting_1095460(18786943, -), CAediting_1095461(18786961, -), CAediting_1095462(18786962, -), CAediting_1095463(18786997, -), CAediting_1095464(18787003, -), CAediting_1095465(18787025, -), CAediting_1095466(18787041, -), CAediting_1095467(18787042, -), CAediting_1095468(18787047, -), CAediting_1095469(18787058, -), CAediting_1095470(18787109, -), CAediting_1095471(18788512, -), CAediting_1095472(18788698, -),

Top

RNA editing positional annotations for RPS15A using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1095401	chr16_18782270_-	UTR3
CAediting_1095402	chr16_18782493_-	UTR3
CAediting_1095403	chr16_18782505_-	UTR3
CAediting_1095404	chr16_18782531_-	UTR3
CAediting_1095405	chr16_18782551_-	UTR3
CAediting_1095406	chr16_18782560_-	UTR3
CAediting_1095407	chr16_18782567_-	UTR3
CAediting_1095408	chr16_18782582_-	UTR3
CAediting_1095409	chr16_18782609_-	UTR3
CAediting_1095410	chr16_18782610_-	UTR3
CAediting_1095411	chr16_18782622_-	UTR3
CAediting_1095412	chr16_18782639_-	UTR3
CAediting_1095413	chr16_18782653_-	UTR3
CAediting_1095414	chr16_18782660_-	UTR3
CAediting_1095415	chr16_18782665_-	UTR3
CAediting_1095416	chr16_18784123_-	ncRNA_exonic
CAediting_1095417	chr16_18784143_-	ncRNA_exonic
CAediting_1095418	chr16_18784157_-	ncRNA_exonic
CAediting_1095419	chr16_18784248_-	ncRNA_exonic
CAediting_1095420	chr16_18784297_-	ncRNA_exonic
CAediting_1095421	chr16_18784317_-	ncRNA_exonic
CAediting_1095422	chr16_18784344_-	ncRNA_exonic
CAediting_1095423	chr16_18784355_-	ncRNA_exonic
CAediting_1095424	chr16_18784359_-	ncRNA_exonic
CAediting_1095425	chr16_18784392_-	ncRNA_exonic
CAediting_1095426	chr16_18784394_-	ncRNA_exonic
CAediting_1095427	chr16_18784408_-	ncRNA_exonic
CAediting_1095428	chr16_18784412_-	ncRNA_exonic
CAediting_1095429	chr16_18784416_-	ncRNA_exonic
CAediting_1095430	chr16_18784453_-	ncRNA_exonic
CAediting_1095431	chr16_18784483_-	ncRNA_exonic
CAediting_1095432	chr16_18784492_-	ncRNA_exonic
CAediting_1095433	chr16_18784496_-	ncRNA_exonic
CAediting_1095434	chr16_18784527_-	ncRNA_exonic
CAediting_1095435	chr16_18784535_-	ncRNA_exonic
CAediting_1095436	chr16_18784541_-	ncRNA_exonic
CAediting_1095437	chr16_18784551_-	ncRNA_exonic
CAediting_1095438	chr16_18786197_-	ncRNA_exonic
CAediting_1095439	chr16_18786199_-	ncRNA_exonic
CAediting_1095440	chr16_18786216_-	ncRNA_exonic
CAediting_1095441	chr16_18786217_-	ncRNA_exonic
CAediting_1095442	chr16_18786241_-	exonic
CAediting_1095443	chr16_18786243_-	exonic
CAediting_1095444	chr16_18786253_-	exonic
CAediting_1095445	chr16_18786265_-	exonic
CAediting_1095446	chr16_18786282_-	exonic
CAediting_1095447	chr16_18786283_-	exonic
CAediting_1095448	chr16_18786289_-	exonic
CAediting_1095449	chr16_18786303_-	exonic
CAediting_1095450	chr16_18786308_-	exonic
CAediting_1095451	chr16_18786320_-	exonic
CAediting_1095452	chr16_18786331_-	exonic
CAediting_1095453	chr16_18786338_-	ncRNA_exonic;splicing
CAediting_1095454	chr16_18786348_-	ncRNA_exonic
CAediting_1095455	chr16_18786661_-	ncRNA_exonic
CAediting_1095456	chr16_18786670_-	ncRNA_exonic
CAediting_1095457	chr16_18786687_-	ncRNA_exonic
CAediting_1095458	chr16_18786699_-	ncRNA_exonic
CAediting_1095459	chr16_18786937_-	intronic
CAediting_1095460	chr16_18786943_-	intronic
CAediting_1095461	chr16_18786961_-	intronic
CAediting_1095462	chr16_18786962_-	intronic
CAediting_1095463	chr16_18786997_-	intronic
CAediting_1095464	chr16_18787003_-	intronic
CAediting_1095465	chr16_18787025_-	intronic
CAediting_1095466	chr16_18787041_-	intronic
CAediting_1095467	chr16_18787042_-	intronic
CAediting_1095468	chr16_18787047_-	intronic
CAediting_1095469	chr16_18787058_-	intronic
CAediting_1095470	chr16_18787109_-	intronic
CAediting_1095471	chr16_18788512_-	intronic
CAediting_1095472	chr16_18788698_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1095401	chr16_18782270_-	SINE	Alu	AluSz
CAediting_1095402	chr16_18782493_-	SINE	Alu	AluSz6
CAediting_1095403	chr16_18782505_-	SINE	Alu	AluSz6
CAediting_1095404	chr16_18782531_-	SINE	Alu	AluSz6
CAediting_1095405	chr16_18782551_-	SINE	Alu	AluSz6
CAediting_1095406	chr16_18782560_-	SINE	Alu	AluSz6
CAediting_1095407	chr16_18782567_-	SINE	Alu	AluSz6
CAediting_1095408	chr16_18782582_-	SINE	Alu	AluSz6
CAediting_1095409	chr16_18782609_-	SINE	Alu	AluSz6
CAediting_1095410	chr16_18782610_-	SINE	Alu	AluSz6
CAediting_1095411	chr16_18782622_-	SINE	Alu	AluSz6
CAediting_1095412	chr16_18782639_-	SINE	Alu	AluSz6
CAediting_1095413	chr16_18782653_-	SINE	Alu	AluSz6
CAediting_1095414	chr16_18782660_-	SINE	Alu	AluSz6
CAediting_1095415	chr16_18782665_-	SINE	Alu	AluSz6
CAediting_1095416	chr16_18784123_-	SINE	Alu	FAM
CAediting_1095417	chr16_18784143_-	SINE	Alu	FAM
CAediting_1095418	chr16_18784157_-	SINE	Alu	FAM
CAediting_1095419	chr16_18784248_-	SINE	Alu	FAM
CAediting_1095420	chr16_18784297_-	SINE	Alu	AluSp
CAediting_1095421	chr16_18784317_-	SINE	Alu	AluSp
CAediting_1095422	chr16_18784344_-	SINE	Alu	AluSp
CAediting_1095423	chr16_18784355_-	SINE	Alu	AluSp
CAediting_1095424	chr16_18784359_-	SINE	Alu	AluSp
CAediting_1095425	chr16_18784392_-	SINE	Alu	AluSp
CAediting_1095426	chr16_18784394_-	SINE	Alu	AluSp
CAediting_1095427	chr16_18784408_-	SINE	Alu	AluSp
CAediting_1095428	chr16_18784412_-	SINE	Alu	AluSp
CAediting_1095429	chr16_18784416_-	SINE	Alu	AluSp
CAediting_1095430	chr16_18784453_-	SINE	Alu	AluSp
CAediting_1095431	chr16_18784483_-	SINE	Alu	AluSp
CAediting_1095432	chr16_18784492_-	SINE	Alu	AluSp
CAediting_1095433	chr16_18784496_-	SINE	Alu	AluSp
CAediting_1095434	chr16_18784527_-	SINE	Alu	AluSp
CAediting_1095435	chr16_18784535_-	SINE	Alu	AluSp
CAediting_1095436	chr16_18784541_-	SINE	Alu	AluSp
CAediting_1095438	chr16_18786197_-	SINE	Alu	AluSx
CAediting_1095439	chr16_18786199_-	SINE	Alu	AluSx
CAediting_1095440	chr16_18786216_-	SINE	Alu	AluSx
CAediting_1095441	chr16_18786217_-	SINE	Alu	AluSx
CAediting_1095442	chr16_18786241_-	SINE	Alu	AluSx
CAediting_1095443	chr16_18786243_-	SINE	Alu	AluSx
CAediting_1095444	chr16_18786253_-	SINE	Alu	AluSx
CAediting_1095445	chr16_18786265_-	SINE	Alu	AluSx
CAediting_1095446	chr16_18786282_-	SINE	Alu	AluSx
CAediting_1095447	chr16_18786283_-	SINE	Alu	AluSx
CAediting_1095448	chr16_18786289_-	SINE	Alu	AluSx
CAediting_1095449	chr16_18786303_-	SINE	Alu	AluSx
CAediting_1095450	chr16_18786308_-	SINE	Alu	AluSx
CAediting_1095451	chr16_18786320_-	SINE	Alu	AluSx
CAediting_1095452	chr16_18786331_-	SINE	Alu	AluSx
CAediting_1095453	chr16_18786338_-	SINE	Alu	AluSx
CAediting_1095454	chr16_18786348_-	SINE	Alu	AluSx
CAediting_1095455	chr16_18786661_-	SINE	Alu	AluJo
CAediting_1095456	chr16_18786670_-	SINE	Alu	AluJo
CAediting_1095457	chr16_18786687_-	SINE	Alu	AluJo
CAediting_1095458	chr16_18786699_-	SINE	Alu	AluJo
CAediting_1095459	chr16_18786937_-	SINE	Alu	AluSg
CAediting_1095460	chr16_18786943_-	SINE	Alu	AluSg
CAediting_1095461	chr16_18786961_-	SINE	Alu	AluSg
CAediting_1095462	chr16_18786962_-	SINE	Alu	AluSg
CAediting_1095463	chr16_18786997_-	SINE	Alu	AluSg
CAediting_1095464	chr16_18787003_-	SINE	Alu	AluSg
CAediting_1095465	chr16_18787025_-	SINE	Alu	AluSg
CAediting_1095466	chr16_18787041_-	SINE	Alu	AluSg
CAediting_1095467	chr16_18787042_-	SINE	Alu	AluSg
CAediting_1095468	chr16_18787047_-	SINE	Alu	AluSg
CAediting_1095469	chr16_18787058_-	SINE	Alu	AluSg
CAediting_1095470	chr16_18787109_-	SINE	Alu	AluSg
CAediting_1095471	chr16_18788512_-	SINE	Alu	AluSx1
CAediting_1095472	chr16_18788698_-	SINE	Alu	AluSx1

Top

RNA A-to-I editing events in the alternative splicing sites for RPS15A

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_1095442	chr16_18786241_-	18786233:18786241	5SS	3+0i	AGGTGAGTG	-15.24	GGGTGAGTG	-17.09

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000134419.14.RPS15A.

Correlation between RNA A-to-I editing and PSI for ENSG00000134419.14.RPS15A.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for RPS15A

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for RPS15A

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for RPS15A

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1095416	chr16_18784123_-	ENSG00000134419.14	ENST00000576436	hsa-miR-150-5p	18784123	18784129	7mer-m8	18784122	18784142	142.00	-14.57
CAediting_1095416	chr16_18784123_-	ENSG00000134419.14	ENST00000569083	hsa-miR-150-5p	18784123	18784129	7mer-m8	18784122	18784142	142.00	-14.57
CAediting_1095419	chr16_18784248_-	ENSG00000134419.14	ENST00000576436	hsa-miR-340-3p	18784247	18784253	7mer-m8	18784246	18784267	159.00	-17.83
CAediting_1095419	chr16_18784248_-	ENSG00000134419.14	ENST00000576436	hsa-miR-6827-3p	18784247	18784253	7mer-m8	18784246	18784267	158.00	-18.63
CAediting_1095419	chr16_18784248_-	ENSG00000134419.14	ENST00000569083	hsa-miR-340-3p	18784247	18784253	7mer-m8	18784246	18784267	159.00	-17.83
CAediting_1095419	chr16_18784248_-	ENSG00000134419.14	ENST00000569083	hsa-miR-6827-3p	18784247	18784253	7mer-m8	18784246	18784267	158.00	-18.63
CAediting_1095421	chr16_18784317_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4267	18784317	18784323	7mer-m8	18784316	18784331	144.00	-20.86
CAediting_1095421	chr16_18784317_-	ENSG00000134419.14	ENST00000576436	hsa-miR-7977	18784315	18784321	7mer-m8	18784314	18784332	158.00	-23.88
CAediting_1095421	chr16_18784317_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4267	18784317	18784323	7mer-m8	18784316	18784331	144.00	-20.86
CAediting_1095421	chr16_18784317_-	ENSG00000134419.14	ENST00000569083	hsa-miR-7977	18784315	18784321	7mer-m8	18784314	18784332	158.00	-23.88
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-miR-1827	18782489	18782495	7mer-m8	18782488	18782506	146.00	-16.73
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-miR-1910-3p	18782490	18782495	6mer	18782483	18782502	142.00	-22.84
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-miR-6808-5p	18782490	18782496	7mer-m8	18782489	18782510	145.00	-16.02
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-miR-6893-5p	18782490	18782496	7mer-m8	18782489	18782510	142.00	-17.63
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-miR-940	18782490	18782496	7mer-m8	18782489	18782509	141.00	-16.73
CAediting_1095403	chr16_18782505_-	ENSG00000134419.14	ENST00000322989	hsa-miR-3622a-3p	18782501	18782508	8mer-1a	18782501	18782521	150.00	-20.49
CAediting_1095403	chr16_18782505_-	ENSG00000134419.14	ENST00000322989	hsa-miR-3622b-3p	18782501	18782508	8mer-1a	18782501	18782521	158.00	-24.55
CAediting_1095403	chr16_18782505_-	ENSG00000134419.14	ENST00000322989	hsa-miR-4649-3p	18782505	18782511	7mer-m8	18782504	18782524	153.00	-22.05
CAediting_1095403	chr16_18782505_-	ENSG00000134419.14	ENST00000322989	hsa-miR-544b	18782504	18782510	7mer-m8	18782503	18782524	150.00	-17.65
CAediting_1095404	chr16_18782531_-	ENSG00000134419.14	ENST00000322989	hsa-miR-3940-3p	18782527	18782533	7mer-m8	18782526	18782547	142.00	-21.15
CAediting_1095405	chr16_18782551_-	ENSG00000134419.14	ENST00000322989	hsa-miR-340-3p	18782550	18782556	7mer-m8	18782549	18782570	160.00	-18.65
CAediting_1095405	chr16_18782551_-	ENSG00000134419.14	ENST00000322989	hsa-miR-6827-3p	18782550	18782556	7mer-m8	18782549	18782569	153.00	-17.53
CAediting_1095406	chr16_18782560_-	ENSG00000134419.14	ENST00000322989	hsa-miR-4698	18782560	18782565	6mer	18782559	18782581	144.00	-14.62
CAediting_1095409	chr16_18782609_-	ENSG00000134419.14	ENST00000322989	hsa-miR-5690	18782606	18782612	7mer-m8	18782605	18782625	145.00	-17.72
CAediting_1095410	chr16_18782610_-	ENSG00000134419.14	ENST00000322989	hsa-miR-4704-3p	18782606	18782612	7mer-m8	18782605	18782626	143.00	-16.85
CAediting_1095410	chr16_18782610_-	ENSG00000134419.14	ENST00000322989	hsa-miR-668-3p	18782608	18782614	7mer-m8	18782607	18782628	154.00	-23.47
CAediting_1095412	chr16_18782639_-	ENSG00000134419.14	ENST00000322989	hsa-miR-3622a-3p	18782635	18782642	8mer-1a	18782635	18782656	148.00	-19.42
CAediting_1095412	chr16_18782639_-	ENSG00000134419.14	ENST00000322989	hsa-miR-3622b-3p	18782635	18782642	8mer-1a	18782635	18782655	153.00	-23.04
CAediting_1095412	chr16_18782639_-	ENSG00000134419.14	ENST00000322989	hsa-miR-4539	18782639	18782644	6mer	18782638	18782657	145.00	-21.50
CAediting_1095413	chr16_18782653_-	ENSG00000134419.14	ENST00000322989	hsa-miR-25-5p	18782651	18782657	7mer-m8	18782650	18782674	145.00	-24.45
CAediting_1095413	chr16_18782653_-	ENSG00000134419.14	ENST00000322989	hsa-miR-658	18782652	18782658	7mer-m8	18782651	18782677	157.00	-31.41
CAediting_1095420	chr16_18784297_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4743-5p	18784294	18784300	7mer-m8	18784293	18784315	145.00	-24.30
CAediting_1095420	chr16_18784297_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4743-5p	18784294	18784300	7mer-m8	18784293	18784315	145.00	-24.30
CAediting_1095422	chr16_18784344_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4437	18784341	18784347	7mer-m8	18784340	18784360	153.00	-20.38
CAediting_1095422	chr16_18784344_-	ENSG00000134419.14	ENST00000576436	hsa-miR-7158-5p	18784343	18784348	6mer	18784342	18784365	144.00	-26.10
CAediting_1095422	chr16_18784344_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4437	18784341	18784347	7mer-m8	18784340	18784360	153.00	-20.38
CAediting_1095422	chr16_18784344_-	ENSG00000134419.14	ENST00000569083	hsa-miR-7158-5p	18784343	18784348	6mer	18784342	18784365	144.00	-26.10
CAediting_1095423	chr16_18784355_-	ENSG00000134419.14	ENST00000576436	hsa-miR-1976	18784354	18784361	8mer-1a	18784354	18784375	148.00	-20.20
CAediting_1095423	chr16_18784355_-	ENSG00000134419.14	ENST00000576436	hsa-miR-26a-1-3p	18784350	18784356	7mer-m8	18784349	18784367	143.00	-11.37
CAediting_1095423	chr16_18784355_-	ENSG00000134419.14	ENST00000576436	hsa-miR-26a-2-3p	18784350	18784356	7mer-m8	18784349	18784368	142.00	-13.57
CAediting_1095423	chr16_18784355_-	ENSG00000134419.14	ENST00000569083	hsa-miR-1976	18784354	18784361	8mer-1a	18784354	18784375	148.00	-20.20
CAediting_1095423	chr16_18784355_-	ENSG00000134419.14	ENST00000569083	hsa-miR-26a-1-3p	18784350	18784356	7mer-m8	18784349	18784367	143.00	-11.37
CAediting_1095423	chr16_18784355_-	ENSG00000134419.14	ENST00000569083	hsa-miR-26a-2-3p	18784350	18784356	7mer-m8	18784349	18784368	142.00	-13.57
CAediting_1095427	chr16_18784408_-	ENSG00000134419.14	ENST00000576436	hsa-miR-1538	18784404	18784410	7mer-m8	18784403	18784424	153.00	-20.19
CAediting_1095427	chr16_18784408_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4745-3p	18784404	18784410	7mer-m8	18784403	18784425	148.00	-21.77
CAediting_1095427	chr16_18784408_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4747-3p	18784403	18784409	7mer-m8	18784402	18784422	146.00	-19.05
CAediting_1095427	chr16_18784408_-	ENSG00000134419.14	ENST00000569083	hsa-miR-1538	18784404	18784410	7mer-m8	18784403	18784424	153.00	-20.19
CAediting_1095427	chr16_18784408_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4745-3p	18784404	18784410	7mer-m8	18784403	18784425	148.00	-21.77
CAediting_1095427	chr16_18784408_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4747-3p	18784403	18784409	7mer-m8	18784402	18784422	146.00	-19.05
CAediting_1095428	chr16_18784412_-	ENSG00000134419.14	ENST00000576436	hsa-miR-3190-5p	18784407	18784413	7mer-m8	18784406	18784425	147.00	-16.24
CAediting_1095428	chr16_18784412_-	ENSG00000134419.14	ENST00000576436	hsa-miR-548s	18784408	18784414	7mer-m8	18784407	18784429	150.00	-11.39
CAediting_1095428	chr16_18784412_-	ENSG00000134419.14	ENST00000569083	hsa-miR-3190-5p	18784407	18784413	7mer-m8	18784406	18784425	147.00	-16.24
CAediting_1095428	chr16_18784412_-	ENSG00000134419.14	ENST00000569083	hsa-miR-548s	18784408	18784414	7mer-m8	18784407	18784429	150.00	-11.39
CAediting_1095432	chr16_18784492_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4707-3p	18784489	18784495	7mer-m8	18784488	18784509	162.00	-27.77
CAediting_1095432	chr16_18784492_-	ENSG00000134419.14	ENST00000576436	hsa-miR-7108-3p	18784490	18784495	6mer	18784485	18784504	141.00	-27.45
CAediting_1095432	chr16_18784492_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4707-3p	18784489	18784495	7mer-m8	18784488	18784509	162.00	-27.77
CAediting_1095432	chr16_18784492_-	ENSG00000134419.14	ENST00000569083	hsa-miR-7108-3p	18784490	18784495	6mer	18784485	18784504	141.00	-27.45
CAediting_1095433	chr16_18784496_-	ENSG00000134419.14	ENST00000576436	hsa-miR-1913	18784491	18784497	7mer-m8	18784490	18784511	147.00	-22.10
CAediting_1095433	chr16_18784496_-	ENSG00000134419.14	ENST00000569083	hsa-miR-1913	18784491	18784497	7mer-m8	18784490	18784511	147.00	-22.10
CAediting_1095434	chr16_18784527_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4634	18784523	18784529	7mer-m8	18784522	18784540	145.00	-19.69
CAediting_1095434	chr16_18784527_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4634	18784523	18784529	7mer-m8	18784522	18784540	145.00	-19.69
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000576436	hsa-miR-340-3p	18784550	18784556	7mer-m8	18784549	18784566	146.00	-15.89
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000576436	hsa-miR-6827-3p	18784550	18784556	7mer-m8	18784549	18784569	152.00	-16.81
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000569083	hsa-miR-340-3p	18784550	18784556	7mer-m8	18784549	18784566	146.00	-15.89
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000569083	hsa-miR-6827-3p	18784550	18784556	7mer-m8	18784549	18784569	152.00	-16.81
CAediting_1095411	chr16_18782622_-	ENSG00000134419.14	ENST00000322989	hsa-miR-1199-3p	18782617	18782623	7mer-m8	18782616	18782636	145.00	-18.96
CAediting_1095429	chr16_18784416_-	ENSG00000134419.14	ENST00000576436	hsa-miR-643	18784415	18784422	8mer-1a	18784415	18784435	154.00	-15.11
CAediting_1095429	chr16_18784416_-	ENSG00000134419.14	ENST00000569083	hsa-miR-643	18784415	18784422	8mer-1a	18784415	18784435	154.00	-15.11
CAediting_1095430	chr16_18784453_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4435	18784449	18784456	8mer-1a	18784449	18784470	142.00	-16.21
CAediting_1095430	chr16_18784453_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4435	18784449	18784456	8mer-1a	18784449	18784470	142.00	-16.21
CAediting_1095430	chr16_18784453_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4435	18784449	18784456	8mer-1a	18784449	18784470	142.00	-16.21
CAediting_1095430	chr16_18784453_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4435	18784449	18784456	8mer-1a	18784449	18784470	142.00	-16.21

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-let-7a-5p	18782489	18782495	7mer-m8	18782488	18782511	146	-16.96
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-let-7a-5p	18782489	18782495	7mer-m8	18782488	18782511	146	-16.96
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-let-7a-5p	18782489	18782495	7mer-m8	18782488	18782511	146	-16.96
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-let-7b-5p	18782489	18782495	7mer-m8	18782488	18782510	151	-17.65
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-let-7c-5p	18782489	18782495	7mer-m8	18782488	18782510	151	-17.88
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-let-7d-5p	18782489	18782495	7mer-m8	18782488	18782511	150	-14.91
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-let-7e-5p	18782489	18782495	7mer-m8	18782488	18782511	150	-20.18
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-let-7f-5p	18782489	18782495	7mer-m8	18782488	18782511	150	-15.05
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-let-7f-5p	18782489	18782495	7mer-m8	18782488	18782511	150	-15.05
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-let-7g-5p	18782489	18782495	7mer-m8	18782488	18782508	142	-15.66
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-let-7i-5p	18782489	18782495	7mer-m8	18782488	18782508	143	-16.41
CAediting_1095408	chr16_18782582_-	ENSG00000134419.14	ENST00000322989	hsa-miR-105-3p	18782578	18782584	7mer-m8	18782577	18782598	149	-21.56
CAediting_1095408	chr16_18782582_-	ENSG00000134419.14	ENST00000322989	hsa-miR-105-3p	18782578	18782584	7mer-m8	18782577	18782598	149	-21.56
CAediting_1095405	chr16_18782551_-	ENSG00000134419.14	ENST00000322989	hsa-miR-10a-5p	18782547	18782553	7mer-m8	18782546	18782568	145	-13.73
CAediting_1095405	chr16_18782551_-	ENSG00000134419.14	ENST00000322989	hsa-miR-10b-5p	18782547	18782553	7mer-m8	18782546	18782569	142	-13.92
CAediting_1095403	chr16_18782505_-	ENSG00000134419.14	ENST00000322989	hsa-miR-1304-5p	18782505	18782511	7mer-m8	18782504	18782524	147	-17.57
CAediting_1095415	chr16_18782665_-	ENSG00000134419.14	ENST00000322989	hsa-miR-194-3p	18782662	18782668	7mer-m8	18782661	18782682	142	-17.13
CAediting_1095405	chr16_18782551_-	ENSG00000134419.14	ENST00000322989	hsa-miR-339-5p	18782548	18782554	7mer-m8	18782547	18782570	148	-16.53
CAediting_1095412	chr16_18782639_-	ENSG00000134419.14	ENST00000322989	hsa-miR-3614-5p	18782635	18782641	7mer-1a	18782635	18782657	148	-22.44
CAediting_1095411	chr16_18782622_-	ENSG00000134419.14	ENST00000322989	hsa-miR-4329	18782621	18782627	7mer-m8	18782620	18782638	140	-11.53
CAediting_1095405	chr16_18782551_-	ENSG00000134419.14	ENST00000322989	hsa-miR-4421	18782549	18782555	7mer-m8	18782548	18782569	149	-15.39
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-miR-4458	18782489	18782495	7mer-m8	18782488	18782505	148	-17.91
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-miR-4500	18782489	18782495	7mer-m8	18782488	18782504	140	-12.93
CAediting_1095408	chr16_18782582_-	ENSG00000134419.14	ENST00000322989	hsa-miR-4764-5p	18782579	18782585	7mer-m8	18782578	18782598	145	-18.99
CAediting_1095405	chr16_18782551_-	ENSG00000134419.14	ENST00000322989	hsa-miR-5699-3p	18782549	18782555	7mer-m8	18782548	18782569	153	-17.99
CAediting_1095414	chr16_18782660_-	ENSG00000134419.14	ENST00000322989	hsa-miR-6086	18782655	18782661	7mer-m8	18782654	18782673	152	-25
CAediting_1095404	chr16_18782531_-	ENSG00000134419.14	ENST00000322989	hsa-miR-612	18782530	18782536	7mer-m8	18782529	18782553	150	-24.35
CAediting_1095414	chr16_18782660_-	ENSG00000134419.14	ENST00000322989	hsa-miR-6516-5p	18782659	18782665	7mer-m8	18782658	18782679	140	-14.48
CAediting_1095404	chr16_18782531_-	ENSG00000134419.14	ENST00000322989	hsa-miR-661	18782528	18782534	7mer-m8	18782527	18782551	151	-24.25
CAediting_1095401	chr16_18782270_-	ENSG00000134419.14	ENST00000322989	hsa-miR-6811-3p	18782267	18782273	7mer-m8	18782266	18782286	140	-15.63
CAediting_1095405	chr16_18782551_-	ENSG00000134419.14	ENST00000322989	hsa-miR-6818-3p	18782551	18782557	7mer-m8	18782550	18782571	140	-11.1
CAediting_1095401	chr16_18782270_-	ENSG00000134419.14	ENST00000322989	hsa-miR-6818-5p	18782270	18782276	7mer-m8	18782269	18782289	151	-18.88
CAediting_1095404	chr16_18782531_-	ENSG00000134419.14	ENST00000322989	hsa-miR-6860	18782530	18782536	7mer-m8	18782529	18782547	152	-24.63
CAediting_1095413	chr16_18782653_-	ENSG00000134419.14	ENST00000322989	hsa-miR-6880-5p	18782651	18782657	7mer-m8	18782650	18782674	152	-26.84
CAediting_1095413	chr16_18782653_-	ENSG00000134419.14	ENST00000322989	hsa-miR-7847-3p	18782652	18782658	7mer-m8	18782651	18782671	149	-21.05
CAediting_1095409	chr16_18782609_-	ENSG00000134419.14	ENST00000322989	hsa-miR-935	18782606	18782612	7mer-m8	18782605	18782627	142	-16.42
CAediting_1095410	chr16_18782610_-	ENSG00000134419.14	ENST00000322989	hsa-miR-935	18782606	18782612	7mer-m8	18782605	18782627	142	-16.42
CAediting_1095404	chr16_18782531_-	ENSG00000134419.14	ENST00000322989	hsa-miR-939-3p	18782529	18782535	7mer-m8	18782528	18782548	140	-15.63
CAediting_1095402	chr16_18782493_-	ENSG00000134419.14	ENST00000322989	hsa-miR-98-5p	18782489	18782495	7mer-m8	18782488	18782509	144	-18.01
CAediting_1095416	chr16_18784123_-	ENSG00000134419.14	ENST00000576436	hsa-miR-10395-3p	18784119	18784125	7mer-m8	18784118	18784137	144	-10.13
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000576436	hsa-miR-10a-5p	18784547	18784553	7mer-m8	18784546	18784568	140	-16.15
CAediting_1095419	chr16_18784248_-	ENSG00000134419.14	ENST00000576436	hsa-miR-10a-5p	18784244	18784250	7mer-m8	18784243	18784265	144	-14.91
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000576436	hsa-miR-10b-5p	18784547	18784553	7mer-m8	18784546	18784568	140	-16.15
CAediting_1095419	chr16_18784248_-	ENSG00000134419.14	ENST00000576436	hsa-miR-10b-5p	18784244	18784250	7mer-m8	18784243	18784265	140	-12.21
CAediting_1095431	chr16_18784483_-	ENSG00000134419.14	ENST00000576436	hsa-miR-125a-3p	18784478	18784485	8mer-1a	18784478	18784499	148	-17.14
CAediting_1095436	chr16_18784541_-	ENSG00000134419.14	ENST00000576436	hsa-miR-1271-3p	18784535	18784542	8mer-1a	18784535	18784557	142	-19.41
CAediting_1095418	chr16_18784157_-	ENSG00000134419.14	ENST00000576436	hsa-miR-1288-3p	18784153	18784159	7mer-m8	18784152	18784173	146	-17.5
CAediting_1095427	chr16_18784408_-	ENSG00000134419.14	ENST00000576436	hsa-miR-3064-5p	18784407	18784412	6mer	18784406	18784426	141	-16.79
CAediting_1095428	chr16_18784412_-	ENSG00000134419.14	ENST00000576436	hsa-miR-3064-5p	18784407	18784412	6mer	18784406	18784426	141	-16.79
CAediting_1095423	chr16_18784355_-	ENSG00000134419.14	ENST00000576436	hsa-miR-3074-5p	18784354	18784361	8mer-1a	18784354	18784370	146	-19.63
CAediting_1095424	chr16_18784359_-	ENSG00000134419.14	ENST00000576436	hsa-miR-3074-5p	18784354	18784361	8mer-1a	18784354	18784370	146	-19.63
CAediting_1095420	chr16_18784297_-	ENSG00000134419.14	ENST00000576436	hsa-miR-3135b	18784295	18784301	7mer-m8	18784294	18784311	155	-29.1
CAediting_1095418	chr16_18784157_-	ENSG00000134419.14	ENST00000576436	hsa-miR-3169	18784152	18784158	7mer-m8	18784151	18784171	153	-20
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000576436	hsa-miR-339-5p	18784548	18784554	7mer-m8	18784547	18784570	141	-19.89
CAediting_1095419	chr16_18784248_-	ENSG00000134419.14	ENST00000576436	hsa-miR-339-5p	18784245	18784251	7mer-m8	18784244	18784267	146	-20.82
CAediting_1095425	chr16_18784392_-	ENSG00000134419.14	ENST00000576436	hsa-miR-3650	18784390	18784396	7mer-m8	18784389	18784407	140	-17.73
CAediting_1095426	chr16_18784394_-	ENSG00000134419.14	ENST00000576436	hsa-miR-3650	18784390	18784396	7mer-m8	18784389	18784407	140	-17.73
CAediting_1095420	chr16_18784297_-	ENSG00000134419.14	ENST00000576436	hsa-miR-3652	18784294	18784300	7mer-m8	18784293	18784309	153	-18.69
CAediting_1095417	chr16_18784143_-	ENSG00000134419.14	ENST00000576436	hsa-miR-3929	18784139	18784145	7mer-m8	18784138	18784160	152	-21.93
CAediting_1095435	chr16_18784535_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4252	18784530	18784536	7mer-m8	18784529	18784547	150	-18.8
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4421	18784549	18784555	7mer-m8	18784548	18784570	150	-20.53
CAediting_1095419	chr16_18784248_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4421	18784246	18784252	7mer-m8	18784245	18784266	142	-12.06
CAediting_1095417	chr16_18784143_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4478	18784139	18784145	7mer-m8	18784138	18784154	155	-28.18
CAediting_1095417	chr16_18784143_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4663	18784141	18784147	7mer-m8	18784140	18784162	151	-22.69
CAediting_1095428	chr16_18784412_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4735-5p	18784411	18784417	7mer-m8	18784410	18784431	140	-6.86
CAediting_1095429	chr16_18784416_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4735-5p	18784411	18784417	7mer-m8	18784410	18784431	140	-6.86
CAediting_1095416	chr16_18784123_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4742-3p	18784118	18784124	7mer-m8	18784117	18784139	151	-21.19
CAediting_1095427	chr16_18784408_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4794	18784407	18784413	7mer-m8	18784406	18784427	140	-12.3
CAediting_1095428	chr16_18784412_-	ENSG00000134419.14	ENST00000576436	hsa-miR-4794	18784407	18784413	7mer-m8	18784406	18784427	140	-12.3
CAediting_1095422	chr16_18784344_-	ENSG00000134419.14	ENST00000576436	hsa-miR-498-5p	18784344	18784350	7mer-m8	18784343	18784365	142	-9.89
CAediting_1095436	chr16_18784541_-	ENSG00000134419.14	ENST00000576436	hsa-miR-550a-3-5p	18784535	18784542	8mer-1a	18784535	18784554	140	-12.5
CAediting_1095436	chr16_18784541_-	ENSG00000134419.14	ENST00000576436	hsa-miR-550a-5p	18784535	18784542	8mer-1a	18784535	18784557	140	-16.97
CAediting_1095436	chr16_18784541_-	ENSG00000134419.14	ENST00000576436	hsa-miR-550a-5p	18784535	18784542	8mer-1a	18784535	18784557	140	-16.97
CAediting_1095435	chr16_18784535_-	ENSG00000134419.14	ENST00000576436	hsa-miR-550b-2-5p	18784535	18784541	7mer-m8	18784534	18784555	145	-14.49
CAediting_1095435	chr16_18784535_-	ENSG00000134419.14	ENST00000576436	hsa-miR-550b-2-5p	18784535	18784541	7mer-m8	18784534	18784555	145	-14.49
CAediting_1095425	chr16_18784392_-	ENSG00000134419.14	ENST00000576436	hsa-miR-552-3p	18784387	18784393	7mer-m8	18784386	18784408	146	-15.93
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000576436	hsa-miR-5699-3p	18784549	18784555	7mer-m8	18784548	18784566	152	-19.58
CAediting_1095420	chr16_18784297_-	ENSG00000134419.14	ENST00000576436	hsa-miR-5787	18784294	18784299	6mer	18784293	18784312	140	-24.96
CAediting_1095435	chr16_18784535_-	ENSG00000134419.14	ENST00000576436	hsa-miR-6529-3p	18784534	18784540	7mer-m8	18784533	18784555	151	-16.31
CAediting_1095427	chr16_18784408_-	ENSG00000134419.14	ENST00000576436	hsa-miR-664a-5p	18784407	18784413	7mer-m8	18784406	18784429	141	-15.14
CAediting_1095428	chr16_18784412_-	ENSG00000134419.14	ENST00000576436	hsa-miR-664a-5p	18784407	18784413	7mer-m8	18784406	18784429	141	-15.14
CAediting_1095432	chr16_18784492_-	ENSG00000134419.14	ENST00000576436	hsa-miR-6747-3p	18784490	18784496	7mer-m8	18784489	18784510	150	-22.22
CAediting_1095424	chr16_18784359_-	ENSG00000134419.14	ENST00000576436	hsa-miR-6747-3p	18784356	18784363	8mer-1a	18784356	18784377	154	-24.84
CAediting_1095434	chr16_18784527_-	ENSG00000134419.14	ENST00000576436	hsa-miR-6807-5p	18784527	18784533	7mer-m8	18784526	18784548	152	-25.08
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000576436	hsa-miR-6818-3p	18784551	18784557	7mer-m8	18784550	18784571	152	-12.39
CAediting_1095419	chr16_18784248_-	ENSG00000134419.14	ENST00000576436	hsa-miR-6818-3p	18784248	18784254	7mer-m8	18784247	18784268	151	-15.54
CAediting_1095425	chr16_18784392_-	ENSG00000134419.14	ENST00000576436	hsa-miR-6867-5p	18784391	18784397	7mer-m8	18784390	18784412	141	-17.87
CAediting_1095426	chr16_18784394_-	ENSG00000134419.14	ENST00000576436	hsa-miR-6867-5p	18784391	18784397	7mer-m8	18784390	18784412	141	-17.87
CAediting_1095435	chr16_18784535_-	ENSG00000134419.14	ENST00000576436	hsa-miR-6889-3p	18784534	18784540	7mer-m8	18784533	18784552	142	-19.5
CAediting_1095417	chr16_18784143_-	ENSG00000134419.14	ENST00000576436	hsa-miR-8077	18784141	18784146	6mer	18784140	18784159	145	-32.46
CAediting_1095416	chr16_18784123_-	ENSG00000134419.14	ENST00000569083	hsa-miR-10395-3p	18784119	18784125	7mer-m8	18784118	18784137	144	-10.13
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000569083	hsa-miR-10a-5p	18784547	18784553	7mer-m8	18784546	18784568	140	-16.15
CAediting_1095419	chr16_18784248_-	ENSG00000134419.14	ENST00000569083	hsa-miR-10a-5p	18784244	18784250	7mer-m8	18784243	18784265	144	-14.91
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000569083	hsa-miR-10b-5p	18784547	18784553	7mer-m8	18784546	18784568	140	-16.15
CAediting_1095419	chr16_18784248_-	ENSG00000134419.14	ENST00000569083	hsa-miR-10b-5p	18784244	18784250	7mer-m8	18784243	18784265	140	-12.21
CAediting_1095431	chr16_18784483_-	ENSG00000134419.14	ENST00000569083	hsa-miR-125a-3p	18784478	18784485	8mer-1a	18784478	18784499	148	-17.14
CAediting_1095436	chr16_18784541_-	ENSG00000134419.14	ENST00000569083	hsa-miR-1271-3p	18784535	18784542	8mer-1a	18784535	18784557	142	-19.41
CAediting_1095418	chr16_18784157_-	ENSG00000134419.14	ENST00000569083	hsa-miR-1288-3p	18784153	18784159	7mer-m8	18784152	18784173	146	-17.5
CAediting_1095427	chr16_18784408_-	ENSG00000134419.14	ENST00000569083	hsa-miR-3064-5p	18784407	18784412	6mer	18784406	18784426	141	-16.79
CAediting_1095428	chr16_18784412_-	ENSG00000134419.14	ENST00000569083	hsa-miR-3064-5p	18784407	18784412	6mer	18784406	18784426	141	-16.79
CAediting_1095423	chr16_18784355_-	ENSG00000134419.14	ENST00000569083	hsa-miR-3074-5p	18784354	18784361	8mer-1a	18784354	18784370	146	-19.63
CAediting_1095424	chr16_18784359_-	ENSG00000134419.14	ENST00000569083	hsa-miR-3074-5p	18784354	18784361	8mer-1a	18784354	18784370	146	-19.63
CAediting_1095420	chr16_18784297_-	ENSG00000134419.14	ENST00000569083	hsa-miR-3135b	18784295	18784301	7mer-m8	18784294	18784311	155	-29.1
CAediting_1095418	chr16_18784157_-	ENSG00000134419.14	ENST00000569083	hsa-miR-3169	18784152	18784158	7mer-m8	18784151	18784171	153	-20
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000569083	hsa-miR-339-5p	18784548	18784554	7mer-m8	18784547	18784570	141	-19.89
CAediting_1095419	chr16_18784248_-	ENSG00000134419.14	ENST00000569083	hsa-miR-339-5p	18784245	18784251	7mer-m8	18784244	18784267	146	-20.82
CAediting_1095425	chr16_18784392_-	ENSG00000134419.14	ENST00000569083	hsa-miR-3650	18784390	18784396	7mer-m8	18784389	18784407	140	-17.73
CAediting_1095426	chr16_18784394_-	ENSG00000134419.14	ENST00000569083	hsa-miR-3650	18784390	18784396	7mer-m8	18784389	18784407	140	-17.73
CAediting_1095420	chr16_18784297_-	ENSG00000134419.14	ENST00000569083	hsa-miR-3652	18784294	18784300	7mer-m8	18784293	18784309	153	-18.69
CAediting_1095417	chr16_18784143_-	ENSG00000134419.14	ENST00000569083	hsa-miR-3929	18784139	18784145	7mer-m8	18784138	18784160	152	-21.93
CAediting_1095435	chr16_18784535_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4252	18784530	18784536	7mer-m8	18784529	18784547	150	-18.8
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4421	18784549	18784555	7mer-m8	18784548	18784570	150	-20.53
CAediting_1095419	chr16_18784248_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4421	18784246	18784252	7mer-m8	18784245	18784266	142	-12.06
CAediting_1095417	chr16_18784143_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4478	18784139	18784145	7mer-m8	18784138	18784154	155	-28.18
CAediting_1095417	chr16_18784143_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4663	18784141	18784147	7mer-m8	18784140	18784162	151	-22.69
CAediting_1095428	chr16_18784412_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4735-5p	18784411	18784417	7mer-m8	18784410	18784431	140	-6.86
CAediting_1095429	chr16_18784416_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4735-5p	18784411	18784417	7mer-m8	18784410	18784431	140	-6.86
CAediting_1095416	chr16_18784123_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4742-3p	18784118	18784124	7mer-m8	18784117	18784139	151	-21.19
CAediting_1095427	chr16_18784408_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4794	18784407	18784413	7mer-m8	18784406	18784427	140	-12.3
CAediting_1095428	chr16_18784412_-	ENSG00000134419.14	ENST00000569083	hsa-miR-4794	18784407	18784413	7mer-m8	18784406	18784427	140	-12.3
CAediting_1095422	chr16_18784344_-	ENSG00000134419.14	ENST00000569083	hsa-miR-498-5p	18784344	18784350	7mer-m8	18784343	18784365	142	-9.89
CAediting_1095436	chr16_18784541_-	ENSG00000134419.14	ENST00000569083	hsa-miR-550a-3-5p	18784535	18784542	8mer-1a	18784535	18784554	140	-12.5
CAediting_1095436	chr16_18784541_-	ENSG00000134419.14	ENST00000569083	hsa-miR-550a-5p	18784535	18784542	8mer-1a	18784535	18784557	140	-16.97
CAediting_1095436	chr16_18784541_-	ENSG00000134419.14	ENST00000569083	hsa-miR-550a-5p	18784535	18784542	8mer-1a	18784535	18784557	140	-16.97
CAediting_1095435	chr16_18784535_-	ENSG00000134419.14	ENST00000569083	hsa-miR-550b-2-5p	18784535	18784541	7mer-m8	18784534	18784555	145	-14.49
CAediting_1095435	chr16_18784535_-	ENSG00000134419.14	ENST00000569083	hsa-miR-550b-2-5p	18784535	18784541	7mer-m8	18784534	18784555	145	-14.49
CAediting_1095425	chr16_18784392_-	ENSG00000134419.14	ENST00000569083	hsa-miR-552-3p	18784387	18784393	7mer-m8	18784386	18784408	146	-15.93
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000569083	hsa-miR-5699-3p	18784549	18784555	7mer-m8	18784548	18784566	152	-19.58
CAediting_1095420	chr16_18784297_-	ENSG00000134419.14	ENST00000569083	hsa-miR-5787	18784294	18784299	6mer	18784293	18784312	140	-24.96
CAediting_1095435	chr16_18784535_-	ENSG00000134419.14	ENST00000569083	hsa-miR-6529-3p	18784534	18784540	7mer-m8	18784533	18784555	151	-16.31
CAediting_1095427	chr16_18784408_-	ENSG00000134419.14	ENST00000569083	hsa-miR-664a-5p	18784407	18784413	7mer-m8	18784406	18784429	141	-15.14
CAediting_1095428	chr16_18784412_-	ENSG00000134419.14	ENST00000569083	hsa-miR-664a-5p	18784407	18784413	7mer-m8	18784406	18784429	141	-15.14
CAediting_1095432	chr16_18784492_-	ENSG00000134419.14	ENST00000569083	hsa-miR-6747-3p	18784490	18784496	7mer-m8	18784489	18784510	150	-22.22
CAediting_1095424	chr16_18784359_-	ENSG00000134419.14	ENST00000569083	hsa-miR-6747-3p	18784356	18784363	8mer-1a	18784356	18784377	154	-24.84
CAediting_1095434	chr16_18784527_-	ENSG00000134419.14	ENST00000569083	hsa-miR-6807-5p	18784527	18784533	7mer-m8	18784526	18784548	152	-25.08
CAediting_1095437	chr16_18784551_-	ENSG00000134419.14	ENST00000569083	hsa-miR-6818-3p	18784551	18784557	7mer-m8	18784550	18784571	152	-12.39
CAediting_1095419	chr16_18784248_-	ENSG00000134419.14	ENST00000569083	hsa-miR-6818-3p	18784248	18784254	7mer-m8	18784247	18784268	151	-15.54
CAediting_1095425	chr16_18784392_-	ENSG00000134419.14	ENST00000569083	hsa-miR-6867-5p	18784391	18784397	7mer-m8	18784390	18784412	141	-17.87
CAediting_1095426	chr16_18784394_-	ENSG00000134419.14	ENST00000569083	hsa-miR-6867-5p	18784391	18784397	7mer-m8	18784390	18784412	141	-17.87
CAediting_1095435	chr16_18784535_-	ENSG00000134419.14	ENST00000569083	hsa-miR-6889-3p	18784534	18784540	7mer-m8	18784533	18784552	142	-19.5
CAediting_1095417	chr16_18784143_-	ENSG00000134419.14	ENST00000569083	hsa-miR-8077	18784141	18784146	6mer	18784140	18784159	145	-32.46

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000134419.14	ENST00000322989	hsa-miR-200b-3p	18781463	18781469	7mer-m8	18781462	18781483	149	-10.54
CAediting_1229414	chr17_67471546_+	ENSG00000134419.14	ENST00000322989	hsa-miR-548aa	18782521	18782527	7mer-m8	18782520	18782544	140	-12.81
CAediting_1229415	chr17_67471547_+	ENSG00000134419.14	ENST00000322989	hsa-miR-548aa	18782354	18782360	7mer-m8	18782353	18782377	150	-11.06
CAediting_77128	chr1_85133844_+	ENSG00000134419.14	ENST00000322989	hsa-miR-4423-3p	18781971	18781977	7mer-m8	18781970	18781990	151	-20.71
CAediting_396018	chr5_1062918_-	ENSG00000134419.14	ENST00000322989	hsa-miR-4635	18782504	18782510	7mer-m8	18782503	18782524	165	-23.44
CAediting_396018	chr5_1062918_-	ENSG00000134419.14	ENST00000322989	hsa-miR-4635	18782078	18782083	6mer	18782077	18782097	146	-20.25
CAediting_580943	chr7_100356700_+	ENSG00000134419.14	ENST00000322989	hsa-miR-6840-3p	18782644	18782650	7mer-m8	18782643	18782664	143	-27.39
CAediting_604450	chr7_133034877_-	ENSG00000134419.14	ENST00000322989	hsa-miR-3654	18781640	18781647	8mer-1a	18781640	18781662	144	-16.05
CAediting_396018	chr5_1062918_-	ENSG00000134419.14	ENST00000572008	hsa-miR-4635	18782078	18782083	6mer	18782077	18782097	146	-20.25
CAediting_1368054	chr19_46709310_-	ENSG00000134419.14	ENST00000576436	hsa-miR-320e	18783238	18783245	8mer-1a	18783238	18783255	140	-13.63
CAediting_228905	chr2_188297554_+	ENSG00000134419.14	ENST00000576436	hsa-miR-561-3p	18784274	18784280	7mer-m8	18784273	18784293	152	-15.41
CAediting_228905	chr2_188297554_+	ENSG00000134419.14	ENST00000569083	hsa-miR-561-3p	18784274	18784280	7mer-m8	18784273	18784293	152	-15.41

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000134419.14	ENST00000322989	hsa-miR-200b-3p	18782427	18782433	7mer-m8	18782426	18782447	140	-8.97
CAediting_580943	chr7_100356700_+	ENSG00000134419.14	ENST00000576436	hsa-miR-6840-3p	18783021	18783028	8mer-1a	18783021	18783042	152	-18.34

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for RPS15A

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for RPS15A

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LIHC	CAediting_1095452	chr16_18786331_-	.	.	0.0204863919528266	0.289146348767266	.	.
PRAD	CAediting_1095452	chr16_18786331_-	0.00822847975729699	0.254238824348463	.	.	.	.
HNSC	CAediting_1095452	chr16_18786331_-	.	.	.	.	0.000319574254142952	0.293771988302429

Top

Relation with cancer stages for RPS15A

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
LUSC	pathologic_stage	CAediting_1095452	chr16_18786331_-	0.0246457067220793	0.202560339949571
SKCM	pathologic_stage	CAediting_1095452	chr16_18786331_-	0.00192499887091646	0.280366360487458

Top

Relation with survival for RPS15A

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
SKCM	CAediting_1095452	chr16_18786331_-	0.013495168863971	0.00798892	127.892

Top

RelatedDrugs for RPS15A

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for RPS15A

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
RPS15A	C1260899	Anemia, Diamond-Blackfan	1	ORPHANET
RPS15A	C2931850	Aase Smith syndrome 2	1	ORPHANET

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene