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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: RPS14 (CAeditome ID:6208) |
Gene summary for RPS14 |
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Gene information | Gene symbol | RPS14 | Gene ID | 6208 |
Gene name | ribosomal protein S14 | |
Synonyms | EMTB|S14 | |
Cytomap | 5q33.1 | |
Type of gene | protein-coding | |
Description | 40S ribosomal protein S14emetine resistancesmall ribosomal subunit protein uS11 | |
Modification date | 20210518 | |
UniProtAcc | P62263 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
RPS14 | GO:0003735 | 40S ribosomal protein S14 | 23636399 |
RPS14 | GO:0048027 | 40S ribosomal protein S14 | 7867928 |
RPS14 | GO:0000122 | 40S ribosomal protein S14 | 7867928 |
RPS14 | GO:0005730 | 40S ribosomal protein S14 | 9152021 |
RPS14 | GO:0014069 | 40S ribosomal protein S14 | 21170055 |
RPS14 | GO:0022626 | 40S ribosomal protein S14 | 23636399 |
RPS14 | GO:0022627 | 40S ribosomal protein S14 | 8706699 |
RPS14 | GO:0022627 | 40S ribosomal protein S14 | 9152021 |
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RNA A-to-I events for RPS14 |
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CAediting_441269(150444740, -), CAediting_441270(150444756, -), CAediting_441271(150444768, -), CAediting_441272(150444859, -), CAediting_441273(150444903, -), CAediting_441274(150444933, -), CAediting_441275(150444979, -), CAediting_441276(150445017, -), CAediting_441277(150445019, -), CAediting_441278(150447708, -), |
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RNA editing positional annotations for RPS14 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_441269 | chr5_150444740_- | ncRNA_intronic |
CAediting_441270 | chr5_150444756_- | ncRNA_intronic |
CAediting_441271 | chr5_150444768_- | ncRNA_intronic |
CAediting_441272 | chr5_150444859_- | ncRNA_intronic |
CAediting_441273 | chr5_150444903_- | ncRNA_intronic |
CAediting_441274 | chr5_150444933_- | ncRNA_intronic |
CAediting_441275 | chr5_150444979_- | ncRNA_intronic |
CAediting_441276 | chr5_150445017_- | ncRNA_intronic |
CAediting_441277 | chr5_150445019_- | ncRNA_intronic |
CAediting_441278 | chr5_150447708_- | exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_441269 | chr5_150444740_- | SINE | Alu | AluSx |
CAediting_441270 | chr5_150444756_- | SINE | Alu | AluSx |
CAediting_441271 | chr5_150444768_- | SINE | Alu | AluSx |
CAediting_441272 | chr5_150444859_- | SINE | Alu | AluSx |
CAediting_441273 | chr5_150444903_- | SINE | Alu | AluSx |
CAediting_441274 | chr5_150444933_- | SINE | Alu | AluSx |
CAediting_441275 | chr5_150444979_- | SINE | Alu | AluSx |
CAediting_441276 | chr5_150445017_- | SINE | Alu | AluSx |
CAediting_441277 | chr5_150445019_- | SINE | Alu | AluSx |
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RNA A-to-I editing events in the alternative splicing sites for RPS14 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RPS14 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for RPS14 |
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The effects of the RNA editing to the miRNA binding sites for RPS14 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_688080 | chr9_63819626_+ | ENSG00000164587.10 | ENST00000518139 | hsa-miR-4477b | 150444271 | 150444278 | 8mer-1a | 150444271 | 150444292 | 155 | -13.18 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for RPS14 |
![]() * Click on the image to enlarge it in a new window. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_441278 | ENST00000312037.5 | chr5_150447708_- | -274.20 | -271.90 | -274.20 |
CAediting_441278 | ENST00000401695.6 | chr5_150447708_- | -546.30 | -545.80 | -546.30 |
CAediting_441278 | ENST00000407193.4 | chr5_150447708_- | -297.80 | -295.50 | -297.80 |
CAediting_441278 | ENST00000518139.4 | chr5_150447708_- | -242.70 | -240.80 | -242.70 |
CAediting_441278 | ENST00000519690.1 | chr5_150447708_- | -1079.80 | -1080.10 | -1079.80 |
CAediting_441278 | ENST00000521466.4 | chr5_150447708_- | -184.60 | -184.50 | -184.60 |
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Relation with ADAR for RPS14 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for RPS14 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for RPS14 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for RPS14 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for RPS14 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
RPS14 | C0003129 | Anoxemia | 1 | CTD_human |
RPS14 | C0003130 | Anoxia | 1 | CTD_human |
RPS14 | C0007097 | Carcinoma | 1 | CTD_human |
RPS14 | C0024667 | Animal Mammary Neoplasms | 1 | CTD_human |
RPS14 | C0024668 | Mammary Neoplasms, Experimental | 1 | CTD_human |
RPS14 | C0027947 | Neutropenia | 1 | CTD_human |
RPS14 | C0205696 | Anaplastic carcinoma | 1 | CTD_human |
RPS14 | C0205697 | Carcinoma, Spindle-Cell | 1 | CTD_human |
RPS14 | C0205698 | Undifferentiated carcinoma | 1 | CTD_human |
RPS14 | C0205699 | Carcinomatosis | 1 | CTD_human |
RPS14 | C0242184 | Hypoxia | 1 | CTD_human |
RPS14 | C0700292 | Hypoxemia | 1 | CTD_human |
RPS14 | C0740302 | 5q-syndrome | 1 | CTD_human;GENOMICS_ENGLAND;ORPHANET |
RPS14 | C1257925 | Mammary Carcinoma, Animal | 1 | CTD_human |
RPS14 | C1292779 | Myelodysplastic Syndrome with Isolated del(5q) | 1 | ORPHANET |