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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: RPS8 (CAeditome ID:6202) |
Gene summary for RPS8 |
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Gene information | Gene symbol | RPS8 | Gene ID | 6202 |
Gene name | ribosomal protein S8 | |
Synonyms | S8 | |
Cytomap | 1p34.1 | |
Type of gene | protein-coding | |
Description | 40S ribosomal protein S8OK/SW-cl.83small ribosomal subunit protein eS8 | |
Modification date | 20210518 | |
UniProtAcc | P62241 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
RPS8 | GO:0003735 | 40S ribosomal protein S8 | 23636399 |
RPS8 | GO:0005783 | 40S ribosomal protein S8 | 0000052 |
RPS8 | GO:0005829 | 40S ribosomal protein S8 | 0000052 |
RPS8 | GO:0022626 | 40S ribosomal protein S8 | 23636399 |
RPS8 | GO:0022627 | 40S ribosomal protein S8 | 8706699 |
RPS8 | GO:1990904 | 40S ribosomal protein S8 | 17289661 |
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RNA A-to-I events for RPS8 |
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CAediting_56001(44776825, +), CAediting_56002(44776858, +), CAediting_56003(44776864, +), CAediting_56004(44776866, +), CAediting_56005(44776867, +), CAediting_56006(44776872, +), CAediting_56007(44776875, +), CAediting_56008(44776889, +), CAediting_56009(44776907, +), CAediting_56010(44776912, +), CAediting_56011(44776926, +), CAediting_56012(44776940, +), CAediting_56013(44776957, +), CAediting_56014(44776970, +), CAediting_56015(44776979, +), CAediting_56016(44777004, +), CAediting_56017(44777014, +), CAediting_56018(44777171, +), CAediting_56019(44777172, +), CAediting_56020(44777176, +), CAediting_56021(44777189, +), CAediting_56022(44777197, +), CAediting_56023(44777201, +), CAediting_56024(44777227, +), CAediting_56025(44777229, +), CAediting_56026(44777268, +), CAediting_56027(44777291, +), CAediting_56028(44777292, +), CAediting_56029(44777305, +), CAediting_56030(44777310, +), CAediting_56031(44777314, +), CAediting_56032(44777324, +), CAediting_56033(44777333, +), CAediting_56034(44777345, +), CAediting_56035(44777354, +), CAediting_56036(44777368, +), CAediting_56037(44777609, +), |
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RNA editing positional annotations for RPS8 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_56001 | chr1_44776825_+ | ncRNA_exonic |
CAediting_56002 | chr1_44776858_+ | ncRNA_exonic |
CAediting_56003 | chr1_44776864_+ | ncRNA_exonic |
CAediting_56004 | chr1_44776866_+ | ncRNA_exonic |
CAediting_56005 | chr1_44776867_+ | ncRNA_exonic |
CAediting_56006 | chr1_44776872_+ | ncRNA_exonic |
CAediting_56007 | chr1_44776875_+ | ncRNA_exonic |
CAediting_56008 | chr1_44776889_+ | ncRNA_exonic |
CAediting_56009 | chr1_44776907_+ | ncRNA_exonic |
CAediting_56010 | chr1_44776912_+ | ncRNA_exonic |
CAediting_56011 | chr1_44776926_+ | ncRNA_exonic |
CAediting_56012 | chr1_44776940_+ | ncRNA_exonic |
CAediting_56013 | chr1_44776957_+ | ncRNA_exonic |
CAediting_56014 | chr1_44776970_+ | ncRNA_exonic |
CAediting_56015 | chr1_44776979_+ | ncRNA_exonic |
CAediting_56016 | chr1_44777004_+ | ncRNA_exonic |
CAediting_56017 | chr1_44777014_+ | ncRNA_exonic |
CAediting_56018 | chr1_44777171_+ | ncRNA_exonic |
CAediting_56019 | chr1_44777172_+ | ncRNA_exonic |
CAediting_56020 | chr1_44777176_+ | ncRNA_exonic |
CAediting_56021 | chr1_44777189_+ | ncRNA_exonic |
CAediting_56022 | chr1_44777197_+ | ncRNA_exonic |
CAediting_56023 | chr1_44777201_+ | ncRNA_exonic |
CAediting_56024 | chr1_44777227_+ | ncRNA_exonic |
CAediting_56025 | chr1_44777229_+ | ncRNA_exonic |
CAediting_56026 | chr1_44777268_+ | ncRNA_exonic |
CAediting_56027 | chr1_44777291_+ | ncRNA_exonic |
CAediting_56028 | chr1_44777292_+ | ncRNA_exonic |
CAediting_56029 | chr1_44777305_+ | ncRNA_exonic |
CAediting_56030 | chr1_44777310_+ | ncRNA_exonic |
CAediting_56031 | chr1_44777314_+ | ncRNA_exonic |
CAediting_56032 | chr1_44777324_+ | ncRNA_exonic |
CAediting_56033 | chr1_44777333_+ | ncRNA_exonic |
CAediting_56034 | chr1_44777345_+ | ncRNA_exonic |
CAediting_56035 | chr1_44777354_+ | ncRNA_exonic |
CAediting_56036 | chr1_44777368_+ | ncRNA_exonic |
CAediting_56037 | chr1_44777609_+ | ncRNA_exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_56002 | chr1_44776858_+ | SINE | Alu | FLAM_C |
CAediting_56003 | chr1_44776864_+ | SINE | Alu | FLAM_C |
CAediting_56004 | chr1_44776866_+ | SINE | Alu | FLAM_C |
CAediting_56005 | chr1_44776867_+ | SINE | Alu | FLAM_C |
CAediting_56006 | chr1_44776872_+ | SINE | Alu | FLAM_C |
CAediting_56007 | chr1_44776875_+ | SINE | Alu | FLAM_C |
CAediting_56008 | chr1_44776889_+ | SINE | Alu | FLAM_C |
CAediting_56009 | chr1_44776907_+ | SINE | Alu | FLAM_C |
CAediting_56010 | chr1_44776912_+ | SINE | Alu | FLAM_C |
CAediting_56011 | chr1_44776926_+ | SINE | Alu | FLAM_C |
CAediting_56012 | chr1_44776940_+ | SINE | Alu | FLAM_C |
CAediting_56013 | chr1_44776957_+ | SINE | Alu | FLAM_C |
CAediting_56018 | chr1_44777171_+ | SINE | Alu | AluSz |
CAediting_56019 | chr1_44777172_+ | SINE | Alu | AluSz |
CAediting_56020 | chr1_44777176_+ | SINE | Alu | AluSz |
CAediting_56021 | chr1_44777189_+ | SINE | Alu | AluSz |
CAediting_56022 | chr1_44777197_+ | SINE | Alu | AluSz |
CAediting_56023 | chr1_44777201_+ | SINE | Alu | AluSz |
CAediting_56024 | chr1_44777227_+ | SINE | Alu | AluSz |
CAediting_56025 | chr1_44777229_+ | SINE | Alu | AluSz |
CAediting_56026 | chr1_44777268_+ | SINE | Alu | AluSz |
CAediting_56027 | chr1_44777291_+ | SINE | Alu | AluSz |
CAediting_56028 | chr1_44777292_+ | SINE | Alu | AluSz |
CAediting_56029 | chr1_44777305_+ | SINE | Alu | AluSz |
CAediting_56030 | chr1_44777310_+ | SINE | Alu | AluSz |
CAediting_56031 | chr1_44777314_+ | SINE | Alu | AluSz |
CAediting_56032 | chr1_44777324_+ | SINE | Alu | AluSz |
CAediting_56033 | chr1_44777333_+ | SINE | Alu | AluSz |
CAediting_56034 | chr1_44777345_+ | SINE | Alu | AluSz |
CAediting_56035 | chr1_44777354_+ | SINE | Alu | AluSz |
CAediting_56036 | chr1_44777368_+ | SINE | Alu | AluSz |
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RNA A-to-I editing events in the alternative splicing sites for RPS8 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
ES | CAediting_56037 | chr1_44777609_+ | 44777593:44777615 | 3SS | 0+4i | CCAAATTTCTCCTGTGAGCAGGT | -23.38 | CCAAATTTCTCCTGTGGGCAGGT | -24.44 |
ES | CAediting_56037 | chr1_44777609_+ | 44777590:44777612 | 3SS | 0+1i | ATGCCAAATTTCTCCTGTGAGCA | -8.3 | ATGCCAAATTTCTCCTGTGGGCA | 0.45 |
ES | CAediting_56037 | chr1_44777609_+ | 44777594:44777616 | 3SS | 0+5i | CAAATTTCTCCTGTGAGCAGGTT | 5.35 | CAAATTTCTCCTGTGGGCAGGTT | 7.34 |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RPS8 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for RPS8 |
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The effects of the RNA editing to the miRNA binding sites for RPS8 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for RPS8 |
![]() * Click on the image to enlarge it in a new window. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_56001 | ENST00000470475.1 | chr1_44776825_+ | -452.00 | -452.00 | -502.50 |
CAediting_56002 | ENST00000470475.1 | chr1_44776858_+ | -451.60 | -452.00 | -502.50 |
CAediting_56003 | ENST00000470475.1 | chr1_44776864_+ | -457.50 | -452.00 | -502.50 |
CAediting_56004 | ENST00000470475.1 | chr1_44776866_+ | -452.10 | -452.00 | -502.50 |
CAediting_56005 | ENST00000470475.1 | chr1_44776867_+ | -451.70 | -452.00 | -502.50 |
CAediting_56006 | ENST00000470475.1 | chr1_44776872_+ | -451.30 | -452.00 | -502.50 |
CAediting_56007 | ENST00000470475.1 | chr1_44776875_+ | -451.60 | -452.00 | -502.50 |
CAediting_56008 | ENST00000470475.1 | chr1_44776889_+ | -451.20 | -452.00 | -502.50 |
CAediting_56009 | ENST00000470475.1 | chr1_44776907_+ | -451.10 | -452.00 | -502.50 |
CAediting_56010 | ENST00000470475.1 | chr1_44776912_+ | -451.20 | -452.00 | -502.50 |
CAediting_56011 | ENST00000470475.1 | chr1_44776926_+ | -451.30 | -452.00 | -502.50 |
CAediting_56012 | ENST00000470475.1 | chr1_44776940_+ | -454.80 | -452.00 | -502.50 |
CAediting_56013 | ENST00000470475.1 | chr1_44776957_+ | -454.10 | -452.00 | -502.50 |
CAediting_56014 | ENST00000470475.1 | chr1_44776970_+ | -451.60 | -452.00 | -502.50 |
CAediting_56015 | ENST00000470475.1 | chr1_44776979_+ | -455.10 | -452.00 | -502.50 |
CAediting_56016 | ENST00000470475.1 | chr1_44777004_+ | -451.60 | -452.00 | -502.50 |
CAediting_56017 | ENST00000470475.1 | chr1_44777014_+ | -452.90 | -452.00 | -502.50 |
CAediting_56018 | ENST00000470475.1 | chr1_44777171_+ | -458.20 | -452.00 | -502.50 |
CAediting_56019 | ENST00000470475.1 | chr1_44777172_+ | -456.90 | -452.00 | -502.50 |
CAediting_56020 | ENST00000470475.1 | chr1_44777176_+ | -453.50 | -452.00 | -502.50 |
CAediting_56021 | ENST00000470475.1 | chr1_44777189_+ | -453.20 | -452.00 | -502.50 |
CAediting_56022 | ENST00000470475.1 | chr1_44777197_+ | -452.20 | -452.00 | -502.50 |
CAediting_56023 | ENST00000470475.1 | chr1_44777201_+ | -458.50 | -452.00 | -502.50 |
CAediting_56024 | ENST00000470475.1 | chr1_44777227_+ | -453.50 | -452.00 | -502.50 |
CAediting_56025 | ENST00000470475.1 | chr1_44777229_+ | -456.50 | -452.00 | -502.50 |
CAediting_56026 | ENST00000470475.1 | chr1_44777268_+ | -457.40 | -452.00 | -502.50 |
CAediting_56027 | ENST00000470475.1 | chr1_44777291_+ | -458.00 | -452.00 | -502.50 |
CAediting_56028 | ENST00000470475.1 | chr1_44777292_+ | -452.30 | -452.00 | -502.50 |
CAediting_56029 | ENST00000470475.1 | chr1_44777305_+ | -450.70 | -452.00 | -502.50 |
CAediting_56030 | ENST00000470475.1 | chr1_44777310_+ | -451.40 | -452.00 | -502.50 |
CAediting_56031 | ENST00000470475.1 | chr1_44777314_+ | -457.40 | -452.00 | -502.50 |
CAediting_56032 | ENST00000470475.1 | chr1_44777324_+ | -459.20 | -452.00 | -502.50 |
CAediting_56033 | ENST00000470475.1 | chr1_44777333_+ | -454.60 | -452.00 | -502.50 |
CAediting_56034 | ENST00000470475.1 | chr1_44777345_+ | -451.70 | -452.00 | -502.50 |
CAediting_56035 | ENST00000470475.1 | chr1_44777354_+ | -451.10 | -452.00 | -502.50 |
CAediting_56036 | ENST00000470475.1 | chr1_44777368_+ | -457.30 | -452.00 | -502.50 |
CAediting_56024 | ENST00000464658.1 | chr1_44777227_+ | -275.40 | -275.10 | -289.70 |
CAediting_56025 | ENST00000464658.1 | chr1_44777229_+ | -275.10 | -275.10 | -289.70 |
CAediting_56026 | ENST00000464658.1 | chr1_44777268_+ | -276.60 | -275.10 | -289.70 |
CAediting_56027 | ENST00000464658.1 | chr1_44777291_+ | -275.10 | -275.10 | -289.70 |
CAediting_56028 | ENST00000464658.1 | chr1_44777292_+ | -275.10 | -275.10 | -289.70 |
CAediting_56029 | ENST00000464658.1 | chr1_44777305_+ | -277.40 | -275.10 | -289.70 |
CAediting_56030 | ENST00000464658.1 | chr1_44777310_+ | -274.50 | -275.10 | -289.70 |
CAediting_56031 | ENST00000464658.1 | chr1_44777314_+ | -274.70 | -275.10 | -289.70 |
CAediting_56032 | ENST00000464658.1 | chr1_44777324_+ | -278.90 | -275.10 | -289.70 |
CAediting_56033 | ENST00000464658.1 | chr1_44777333_+ | -278.90 | -275.10 | -289.70 |
CAediting_56034 | ENST00000464658.1 | chr1_44777345_+ | -275.30 | -275.10 | -289.70 |
CAediting_56035 | ENST00000464658.1 | chr1_44777354_+ | -279.20 | -275.10 | -289.70 |
CAediting_56036 | ENST00000464658.1 | chr1_44777368_+ | -275.90 | -275.10 | -289.70 |
CAediting_56037 | ENST00000464658.1 | chr1_44777609_+ | -275.40 | -275.10 | -289.70 |
CAediting_56037 | ENST00000484599.1 | chr1_44777609_+ | -286.80 | -284.50 | -286.80 |
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Relation with ADAR for RPS8 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
BRCA | CAediting_56005 | chr1_44776867_+ | 0.0295210120066501 | 0.197952307716992 | . | . | 0.0073215555618271 | 0.242668244380064 |
BRCA | CAediting_56021 | chr1_44777189_+ | 0.0303185910049944 | 0.216733769331928 | . | . | . | . |
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Relation with cancer stages for RPS8 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for RPS8 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
LUSC | CAediting_56005 | chr1_44776867_+ | 0.00111623750941225 | 0.0069406 | 0.00174597 |
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RelatedDrugs for RPS8 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for RPS8 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
RPS8 | C0006142 | Malignant neoplasm of breast | 1 | CTD_human |
RPS8 | C0030567 | Parkinson Disease | 1 | CTD_human |
RPS8 | C0043094 | Weight Gain | 1 | CTD_human |
RPS8 | C0678222 | Breast Carcinoma | 1 | CTD_human |
RPS8 | C1257931 | Mammary Neoplasms, Human | 1 | CTD_human |
RPS8 | C1458155 | Mammary Neoplasms | 1 | CTD_human |
RPS8 | C4704874 | Mammary Carcinoma, Human | 1 | CTD_human |