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Editing gene: BCR (CAeditome ID:613)

Gene summary for BCR

Gene summary

Gene information	Gene symbol	BCR
	Gene ID	613
	Gene name	BCR activator of RhoGEF and GTPase
	Synonyms	ALL\|BCR1\|CML\|D22S11\|D22S662\|PHL
	Cytomap	22q11.23
	Type of gene	protein-coding
	Description	breakpoint cluster region proteinBCR, RhoGEF and GTPase activating proteinBCR/FGFR1 chimera proteinFGFR1/BCR chimera proteinbreakpoint cluster regionrenal carcinoma antigen NY-REN-26
	Modification date	20210531
	UniProtAcc	P11274
	Context	- 31837444(Preclinical development of a novel BCR-ABL T315I inhibitor against chronic myeloid leukemia)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
BCR	GO:0005085	Breakpoint cluster region protein	7479768
BCR	GO:0005096	Breakpoint cluster region protein	1903516
BCR	GO:0005096	Breakpoint cluster region protein	7479768
BCR	GO:0090630	Breakpoint cluster region protein	7479768
BCR	GO:0032991	Breakpoint cluster region protein	23382219

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RNA A-to-I events for BCR

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000186716.18

RNA A-to-I editing events in Cancer.

CAediting_1464385(23182025, +), CAediting_1464386(23182077, +), CAediting_1464387(23184147, +), CAediting_1464388(23185477, +), CAediting_1464389(23185981, +), CAediting_1464390(23194755, +), CAediting_1464391(23194762, +), CAediting_1464392(23194790, +), CAediting_1464393(23195022, +), CAediting_1464394(23195519, +), CAediting_1464395(23195525, +), CAediting_1464396(23195768, +), CAediting_1464397(23196546, +), CAediting_1464398(23196683, +), CAediting_1464399(23196955, +), CAediting_1464400(23198918, +), CAediting_1464401(23198964, +), CAediting_1464402(23199030, +), CAediting_1464403(23199066, +), CAediting_1464404(23199067, +), CAediting_1464405(23199835, +), CAediting_1464406(23199844, +), CAediting_1464407(23199967, +), CAediting_1464408(23199981, +), CAediting_1464409(23200009, +), CAediting_1464410(23200020, +), CAediting_1464411(23200029, +), CAediting_1464412(23200033, +), CAediting_1464413(23200038, +), CAediting_1464414(23200340, +), CAediting_1464415(23200389, +), CAediting_1464416(23200440, +), CAediting_1464417(23200441, +), CAediting_1464418(23200444, +), CAediting_1464419(23200578, +), CAediting_1464420(23200688, +), CAediting_1464421(23200803, +), CAediting_1464422(23200822, +), CAediting_1464423(23202987, +), CAediting_1464424(23203049, +), CAediting_1464425(23203080, +), CAediting_1464426(23203095, +), CAediting_1464427(23203096, +), CAediting_1464428(23207433, +), CAediting_1464429(23207434, +), CAediting_1464430(23207502, +), CAediting_1464431(23209166, +), CAediting_1464432(23209172, +), CAediting_1464433(23209177, +), CAediting_1464434(23209187, +), CAediting_1464435(23209673, +), CAediting_1464436(23209813, +), CAediting_1464437(23210217, +), CAediting_1464438(23210229, +), CAediting_1464439(23210230, +), CAediting_1464440(23211693, +), CAediting_1464441(23211699, +), CAediting_1464442(23213709, +), CAediting_1464443(23213719, +), CAediting_1464444(23231399, +), CAediting_1464445(23231412, +), CAediting_1464446(23233510, +), CAediting_1464447(23233573, +), CAediting_1464448(23233669, +), CAediting_1464449(23233683, +), CAediting_1464450(23233692, +), CAediting_1464451(23233711, +), CAediting_1464452(23235181, +), CAediting_1464453(23239888, +), CAediting_1464454(23239893, +), CAediting_1464455(23239931, +), CAediting_1464456(23239944, +), CAediting_1464457(23240032, +), CAediting_1464458(23240071, +), CAediting_1464459(23240089, +), CAediting_1464460(23240504, +), CAediting_1464461(23240530, +), CAediting_1464462(23240540, +), CAediting_1464463(23240557, +), CAediting_1464464(23240572, +), CAediting_1464465(23240601, +), CAediting_1464466(23243845, +), CAediting_1464467(23246326, +), CAediting_1464468(23294420, +), CAediting_1464469(23294518, +), CAediting_1464470(23294530, +), CAediting_1464471(23296217, +), CAediting_1464472(23296227, +), CAediting_1464473(23296253, +), CAediting_1464474(23296263, +), CAediting_1464475(23296276, +), CAediting_1464476(23296286, +), CAediting_1464477(23296295, +), CAediting_1464478(23296329, +), CAediting_1464479(23296331, +), CAediting_1464480(23296700, +), CAediting_1464481(23297057, +), CAediting_1464482(23297099, +), CAediting_1464483(23297107, +), CAediting_1464484(23297154, +), CAediting_1464485(23297162, +), CAediting_1464486(23297176, +), CAediting_1464487(23297333, +), CAediting_1464488(23298665, +), CAediting_1464489(23298696, +), CAediting_1464490(23298722, +), CAediting_1464491(23298723, +), CAediting_1464492(23298741, +), CAediting_1464493(23298772, +), CAediting_1464494(23299020, +), CAediting_1464495(23299114, +), CAediting_1464496(23299172, +), CAediting_1464497(23299308, +), CAediting_1464498(23299426, +), CAediting_1464499(23299440, +), CAediting_1464500(23299660, +), CAediting_1464501(23299671, +), CAediting_1464502(23299718, +), CAediting_1464503(23299724, +), CAediting_1464504(23299753, +), CAediting_1464505(23301102, +), CAediting_1464506(23301126, +), CAediting_1464507(23301127, +), CAediting_1464508(23301128, +), CAediting_1464509(23301139, +), CAediting_1464510(23301142, +), CAediting_1464511(23301143, +), CAediting_1464512(23301148, +), CAediting_1464513(23301151, +), CAediting_1464514(23301152, +), CAediting_1464515(23301153, +), CAediting_1464516(23301154, +), CAediting_1464517(23301155, +), CAediting_1464518(23301156, +), CAediting_1464519(23301159, +), CAediting_1464520(23301163, +), CAediting_1464521(23301238, +), CAediting_1464522(23301255, +), CAediting_1464523(23303096, +), CAediting_1464524(23303097, +), CAediting_1464525(23303102, +), CAediting_1464526(23303142, +), CAediting_1464527(23303604, +), CAediting_1464528(23303609, +), CAediting_1464529(23303610, +), CAediting_1464530(23303611, +), CAediting_1464531(23304129, +), CAediting_1464532(23304837, +), CAediting_1464533(23304868, +), CAediting_1464534(23304873, +), CAediting_1464535(23304905, +), CAediting_1464536(23304929, +), CAediting_1464537(23304953, +), CAediting_1464538(23304968, +), CAediting_1464539(23304976, +), CAediting_1464540(23304994, +), CAediting_1464541(23304995, +), CAediting_1464542(23305000, +), CAediting_1464543(23305008, +), CAediting_1464544(23305021, +), CAediting_1464545(23305035, +), CAediting_1464546(23305039, +), CAediting_1464547(23305046, +), CAediting_1464548(23305096, +), CAediting_1464549(23307175, +), CAediting_1464550(23307213, +), CAediting_1464551(23307241, +), CAediting_1464552(23307243, +), CAediting_1464553(23308327, +), CAediting_1464554(23308331, +), CAediting_1464555(23308392, +), CAediting_1464556(23308400, +), CAediting_1464557(23308431, +), CAediting_1464558(23308432, +), CAediting_1464559(23308490, +), CAediting_1464560(23308496, +), CAediting_1464561(23308504, +), CAediting_1464562(23308512, +), CAediting_1464563(23308557, +), CAediting_1464564(23308567, +), CAediting_1464565(23308579, +),

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RNA editing positional annotations for BCR using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1464386	chr22_23182077_+	nonsynonymous SNV	ENST00000305877.11	c.A1117G	p.N373D	D	B	N
CAediting_1464386	chr22_23182077_+	nonsynonymous SNV	ENST00000359540.6	c.A1117G	p.N373D	D	B	N

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1464385	chr22_23182025_+	exonic
CAediting_1464386	chr22_23182077_+	exonic
CAediting_1464387	chr22_23184147_+	ncRNA_intronic
CAediting_1464388	chr22_23185477_+	ncRNA_intronic
CAediting_1464389	chr22_23185981_+	ncRNA_intronic
CAediting_1464390	chr22_23194755_+	ncRNA_intronic
CAediting_1464391	chr22_23194762_+	ncRNA_intronic
CAediting_1464392	chr22_23194790_+	ncRNA_intronic
CAediting_1464393	chr22_23195022_+	ncRNA_intronic
CAediting_1464394	chr22_23195519_+	ncRNA_intronic
CAediting_1464395	chr22_23195525_+	ncRNA_intronic
CAediting_1464396	chr22_23195768_+	ncRNA_intronic
CAediting_1464397	chr22_23196546_+	ncRNA_intronic
CAediting_1464398	chr22_23196683_+	ncRNA_intronic
CAediting_1464399	chr22_23196955_+	ncRNA_intronic
CAediting_1464400	chr22_23198918_+	ncRNA_intronic
CAediting_1464401	chr22_23198964_+	ncRNA_intronic
CAediting_1464402	chr22_23199030_+	ncRNA_intronic
CAediting_1464403	chr22_23199066_+	ncRNA_intronic
CAediting_1464404	chr22_23199067_+	ncRNA_intronic
CAediting_1464405	chr22_23199835_+	ncRNA_intronic
CAediting_1464406	chr22_23199844_+	ncRNA_intronic
CAediting_1464407	chr22_23199967_+	ncRNA_intronic
CAediting_1464408	chr22_23199981_+	ncRNA_intronic
CAediting_1464409	chr22_23200009_+	ncRNA_intronic
CAediting_1464410	chr22_23200020_+	ncRNA_intronic
CAediting_1464411	chr22_23200029_+	ncRNA_intronic
CAediting_1464412	chr22_23200033_+	ncRNA_intronic
CAediting_1464413	chr22_23200038_+	ncRNA_intronic
CAediting_1464414	chr22_23200340_+	ncRNA_intronic
CAediting_1464415	chr22_23200389_+	ncRNA_intronic
CAediting_1464416	chr22_23200440_+	ncRNA_intronic
CAediting_1464417	chr22_23200441_+	ncRNA_intronic
CAediting_1464418	chr22_23200444_+	ncRNA_intronic
CAediting_1464419	chr22_23200578_+	ncRNA_intronic
CAediting_1464420	chr22_23200688_+	ncRNA_intronic
CAediting_1464421	chr22_23200803_+	ncRNA_intronic
CAediting_1464422	chr22_23200822_+	ncRNA_intronic
CAediting_1464423	chr22_23202987_+	ncRNA_intronic
CAediting_1464424	chr22_23203049_+	ncRNA_intronic
CAediting_1464425	chr22_23203080_+	ncRNA_intronic
CAediting_1464426	chr22_23203095_+	ncRNA_intronic
CAediting_1464427	chr22_23203096_+	ncRNA_intronic
CAediting_1464428	chr22_23207433_+	ncRNA_intronic
CAediting_1464429	chr22_23207434_+	ncRNA_intronic
CAediting_1464430	chr22_23207502_+	ncRNA_intronic
CAediting_1464431	chr22_23209166_+	ncRNA_intronic
CAediting_1464432	chr22_23209172_+	ncRNA_intronic
CAediting_1464433	chr22_23209177_+	ncRNA_intronic
CAediting_1464434	chr22_23209187_+	ncRNA_intronic
CAediting_1464435	chr22_23209673_+	ncRNA_intronic
CAediting_1464436	chr22_23209813_+	ncRNA_intronic
CAediting_1464437	chr22_23210217_+	ncRNA_intronic
CAediting_1464438	chr22_23210229_+	ncRNA_intronic
CAediting_1464439	chr22_23210230_+	ncRNA_intronic
CAediting_1464440	chr22_23211693_+	ncRNA_intronic
CAediting_1464441	chr22_23211699_+	ncRNA_intronic
CAediting_1464442	chr22_23213709_+	ncRNA_intronic
CAediting_1464443	chr22_23213719_+	ncRNA_intronic
CAediting_1464444	chr22_23231399_+	ncRNA_intronic
CAediting_1464445	chr22_23231412_+	ncRNA_intronic
CAediting_1464446	chr22_23233510_+	ncRNA_intronic
CAediting_1464447	chr22_23233573_+	ncRNA_intronic
CAediting_1464448	chr22_23233669_+	ncRNA_intronic
CAediting_1464449	chr22_23233683_+	ncRNA_intronic
CAediting_1464450	chr22_23233692_+	ncRNA_intronic
CAediting_1464451	chr22_23233711_+	ncRNA_intronic
CAediting_1464452	chr22_23235181_+	ncRNA_intronic
CAediting_1464453	chr22_23239888_+	ncRNA_intronic
CAediting_1464454	chr22_23239893_+	ncRNA_intronic
CAediting_1464455	chr22_23239931_+	ncRNA_intronic
CAediting_1464456	chr22_23239944_+	ncRNA_intronic
CAediting_1464457	chr22_23240032_+	ncRNA_intronic
CAediting_1464458	chr22_23240071_+	ncRNA_intronic
CAediting_1464459	chr22_23240089_+	ncRNA_intronic
CAediting_1464460	chr22_23240504_+	ncRNA_intronic
CAediting_1464461	chr22_23240530_+	ncRNA_intronic
CAediting_1464462	chr22_23240540_+	ncRNA_intronic
CAediting_1464463	chr22_23240557_+	ncRNA_intronic
CAediting_1464464	chr22_23240572_+	ncRNA_intronic
CAediting_1464465	chr22_23240601_+	ncRNA_intronic
CAediting_1464466	chr22_23243845_+	ncRNA_intronic
CAediting_1464467	chr22_23246326_+	ncRNA_intronic
CAediting_1464468	chr22_23294420_+	ncRNA_intronic
CAediting_1464469	chr22_23294518_+	ncRNA_intronic
CAediting_1464470	chr22_23294530_+	ncRNA_intronic
CAediting_1464471	chr22_23296217_+	ncRNA_intronic
CAediting_1464472	chr22_23296227_+	ncRNA_intronic
CAediting_1464473	chr22_23296253_+	ncRNA_intronic
CAediting_1464474	chr22_23296263_+	ncRNA_intronic
CAediting_1464475	chr22_23296276_+	ncRNA_intronic
CAediting_1464476	chr22_23296286_+	ncRNA_intronic
CAediting_1464477	chr22_23296295_+	ncRNA_intronic
CAediting_1464478	chr22_23296329_+	ncRNA_intronic
CAediting_1464479	chr22_23296331_+	ncRNA_intronic
CAediting_1464480	chr22_23296700_+	ncRNA_intronic
CAediting_1464481	chr22_23297057_+	ncRNA_intronic
CAediting_1464482	chr22_23297099_+	ncRNA_intronic
CAediting_1464483	chr22_23297107_+	ncRNA_intronic
CAediting_1464484	chr22_23297154_+	ncRNA_intronic
CAediting_1464485	chr22_23297162_+	ncRNA_intronic
CAediting_1464486	chr22_23297176_+	ncRNA_intronic
CAediting_1464487	chr22_23297333_+	ncRNA_intronic
CAediting_1464488	chr22_23298665_+	ncRNA_intronic
CAediting_1464489	chr22_23298696_+	ncRNA_intronic
CAediting_1464490	chr22_23298722_+	ncRNA_intronic
CAediting_1464491	chr22_23298723_+	ncRNA_intronic
CAediting_1464492	chr22_23298741_+	ncRNA_intronic
CAediting_1464493	chr22_23298772_+	ncRNA_intronic
CAediting_1464494	chr22_23299020_+	ncRNA_intronic
CAediting_1464495	chr22_23299114_+	ncRNA_intronic
CAediting_1464496	chr22_23299172_+	ncRNA_intronic
CAediting_1464497	chr22_23299308_+	ncRNA_intronic
CAediting_1464498	chr22_23299426_+	ncRNA_intronic
CAediting_1464499	chr22_23299440_+	ncRNA_intronic
CAediting_1464500	chr22_23299660_+	ncRNA_intronic
CAediting_1464501	chr22_23299671_+	ncRNA_intronic
CAediting_1464502	chr22_23299718_+	ncRNA_intronic
CAediting_1464503	chr22_23299724_+	ncRNA_intronic
CAediting_1464504	chr22_23299753_+	ncRNA_intronic
CAediting_1464505	chr22_23301102_+	ncRNA_intronic
CAediting_1464506	chr22_23301126_+	ncRNA_intronic
CAediting_1464507	chr22_23301127_+	ncRNA_intronic
CAediting_1464508	chr22_23301128_+	ncRNA_intronic
CAediting_1464509	chr22_23301139_+	ncRNA_intronic
CAediting_1464510	chr22_23301142_+	ncRNA_intronic
CAediting_1464511	chr22_23301143_+	ncRNA_intronic
CAediting_1464512	chr22_23301148_+	ncRNA_intronic
CAediting_1464513	chr22_23301151_+	ncRNA_intronic
CAediting_1464514	chr22_23301152_+	ncRNA_intronic
CAediting_1464515	chr22_23301153_+	ncRNA_intronic
CAediting_1464516	chr22_23301154_+	ncRNA_intronic
CAediting_1464517	chr22_23301155_+	ncRNA_intronic
CAediting_1464518	chr22_23301156_+	ncRNA_intronic
CAediting_1464519	chr22_23301159_+	ncRNA_intronic
CAediting_1464520	chr22_23301163_+	ncRNA_intronic
CAediting_1464521	chr22_23301238_+	ncRNA_intronic
CAediting_1464522	chr22_23301255_+	ncRNA_intronic
CAediting_1464523	chr22_23303096_+	ncRNA_intronic
CAediting_1464524	chr22_23303097_+	ncRNA_intronic
CAediting_1464525	chr22_23303102_+	ncRNA_intronic
CAediting_1464526	chr22_23303142_+	ncRNA_intronic
CAediting_1464527	chr22_23303604_+	ncRNA_intronic
CAediting_1464528	chr22_23303609_+	ncRNA_intronic
CAediting_1464529	chr22_23303610_+	ncRNA_intronic
CAediting_1464530	chr22_23303611_+	ncRNA_intronic
CAediting_1464531	chr22_23304129_+	ncRNA_intronic
CAediting_1464532	chr22_23304837_+	ncRNA_intronic
CAediting_1464533	chr22_23304868_+	ncRNA_intronic
CAediting_1464534	chr22_23304873_+	ncRNA_intronic
CAediting_1464535	chr22_23304905_+	ncRNA_intronic
CAediting_1464536	chr22_23304929_+	ncRNA_intronic
CAediting_1464537	chr22_23304953_+	ncRNA_intronic
CAediting_1464538	chr22_23304968_+	ncRNA_intronic
CAediting_1464539	chr22_23304976_+	ncRNA_intronic
CAediting_1464540	chr22_23304994_+	ncRNA_intronic
CAediting_1464541	chr22_23304995_+	ncRNA_intronic
CAediting_1464542	chr22_23305000_+	ncRNA_intronic
CAediting_1464543	chr22_23305008_+	ncRNA_intronic
CAediting_1464544	chr22_23305021_+	ncRNA_intronic
CAediting_1464545	chr22_23305035_+	ncRNA_intronic
CAediting_1464546	chr22_23305039_+	ncRNA_intronic
CAediting_1464547	chr22_23305046_+	ncRNA_intronic
CAediting_1464548	chr22_23305096_+	ncRNA_intronic
CAediting_1464549	chr22_23307175_+	ncRNA_intronic
CAediting_1464550	chr22_23307213_+	ncRNA_intronic
CAediting_1464551	chr22_23307241_+	ncRNA_intronic
CAediting_1464552	chr22_23307243_+	ncRNA_intronic
CAediting_1464553	chr22_23308327_+	ncRNA_intronic
CAediting_1464554	chr22_23308331_+	ncRNA_intronic
CAediting_1464555	chr22_23308392_+	ncRNA_intronic
CAediting_1464556	chr22_23308400_+	ncRNA_intronic
CAediting_1464557	chr22_23308431_+	ncRNA_intronic
CAediting_1464558	chr22_23308432_+	ncRNA_intronic
CAediting_1464559	chr22_23308490_+	ncRNA_intronic
CAediting_1464560	chr22_23308496_+	ncRNA_intronic
CAediting_1464561	chr22_23308504_+	ncRNA_intronic
CAediting_1464562	chr22_23308512_+	ncRNA_intronic
CAediting_1464563	chr22_23308557_+	ncRNA_intronic
CAediting_1464564	chr22_23308567_+	ncRNA_intronic
CAediting_1464565	chr22_23308579_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1464387	chr22_23184147_+	SINE	Alu	AluJo
CAediting_1464388	chr22_23185477_+	SINE	Alu	AluYm1
CAediting_1464389	chr22_23185981_+	SINE	Alu	AluY
CAediting_1464390	chr22_23194755_+	SINE	Alu	AluJr
CAediting_1464391	chr22_23194762_+	SINE	Alu	AluJr
CAediting_1464392	chr22_23194790_+	SINE	Alu	AluJr
CAediting_1464393	chr22_23195022_+	SINE	Alu	AluSx
CAediting_1464394	chr22_23195519_+	SINE	Alu	AluSx
CAediting_1464395	chr22_23195525_+	SINE	Alu	AluSx
CAediting_1464396	chr22_23195768_+	SINE	Alu	AluSq2
CAediting_1464397	chr22_23196546_+	DNA	TcMar-Tigger	MER2
CAediting_1464398	chr22_23196683_+	DNA	hAT-Charlie	MER1B
CAediting_1464399	chr22_23196955_+	DNA	TcMar-Tigger	MER2
CAediting_1464400	chr22_23198918_+	SINE	Alu	AluSq2
CAediting_1464401	chr22_23198964_+	SINE	Alu	AluSq2
CAediting_1464402	chr22_23199030_+	SINE	Alu	AluSq2
CAediting_1464403	chr22_23199066_+	SINE	Alu	AluSq2
CAediting_1464404	chr22_23199067_+	SINE	Alu	AluSq2
CAediting_1464405	chr22_23199835_+	SINE	Alu	AluY
CAediting_1464406	chr22_23199844_+	SINE	Alu	AluY
CAediting_1464407	chr22_23199967_+	SINE	Alu	AluY
CAediting_1464408	chr22_23199981_+	SINE	Alu	AluY
CAediting_1464409	chr22_23200009_+	SINE	Alu	AluY
CAediting_1464410	chr22_23200020_+	SINE	Alu	AluY
CAediting_1464411	chr22_23200029_+	SINE	Alu	AluY
CAediting_1464412	chr22_23200033_+	SINE	Alu	AluY
CAediting_1464413	chr22_23200038_+	SINE	Alu	AluY
CAediting_1464414	chr22_23200340_+	SINE	Alu	AluJb
CAediting_1464415	chr22_23200389_+	SINE	Alu	AluJb
CAediting_1464416	chr22_23200440_+	SINE	Alu	AluJb
CAediting_1464417	chr22_23200441_+	SINE	Alu	AluJb
CAediting_1464418	chr22_23200444_+	SINE	Alu	AluJb
CAediting_1464419	chr22_23200578_+	SINE	Alu	AluJb
CAediting_1464420	chr22_23200688_+	SINE	Alu	AluJb
CAediting_1464421	chr22_23200803_+	SINE	Alu	AluJb
CAediting_1464422	chr22_23200822_+	SINE	Alu	AluJb
CAediting_1464423	chr22_23202987_+	SINE	Alu	AluJo
CAediting_1464424	chr22_23203049_+	SINE	Alu	AluJo
CAediting_1464425	chr22_23203080_+	SINE	Alu	AluJo
CAediting_1464426	chr22_23203095_+	SINE	Alu	AluJo
CAediting_1464427	chr22_23203096_+	SINE	Alu	AluJo
CAediting_1464428	chr22_23207433_+	SINE	Alu	AluJr
CAediting_1464429	chr22_23207434_+	SINE	Alu	AluJr
CAediting_1464430	chr22_23207502_+	SINE	Alu	AluJr
CAediting_1464431	chr22_23209166_+	SINE	Alu	AluSx
CAediting_1464432	chr22_23209172_+	SINE	Alu	AluSx
CAediting_1464433	chr22_23209177_+	SINE	Alu	AluSx
CAediting_1464434	chr22_23209187_+	SINE	Alu	AluSx
CAediting_1464435	chr22_23209673_+	SINE	Alu	AluY
CAediting_1464436	chr22_23209813_+	SINE	Alu	FLAM_A
CAediting_1464437	chr22_23210217_+	SINE	Alu	AluJb
CAediting_1464438	chr22_23210229_+	SINE	Alu	AluJb
CAediting_1464439	chr22_23210230_+	SINE	Alu	AluJb
CAediting_1464440	chr22_23211693_+	SINE	Alu	AluSx1
CAediting_1464441	chr22_23211699_+	SINE	Alu	AluSx1
CAediting_1464442	chr22_23213709_+	SINE	Alu	AluJr4
CAediting_1464443	chr22_23213719_+	SINE	Alu	AluJr4
CAediting_1464444	chr22_23231399_+	SINE	Alu	AluJr
CAediting_1464445	chr22_23231412_+	SINE	Alu	AluJr
CAediting_1464446	chr22_23233510_+	SINE	Alu	AluSz
CAediting_1464447	chr22_23233573_+	SINE	Alu	AluSz
CAediting_1464448	chr22_23233669_+	SINE	Alu	AluSz
CAediting_1464449	chr22_23233683_+	SINE	Alu	AluSz
CAediting_1464450	chr22_23233692_+	SINE	Alu	AluSz
CAediting_1464451	chr22_23233711_+	SINE	Alu	AluSz
CAediting_1464452	chr22_23235181_+	SINE	Alu	AluSz
CAediting_1464453	chr22_23239888_+	SINE	Alu	AluJr
CAediting_1464454	chr22_23239893_+	SINE	Alu	AluJr
CAediting_1464455	chr22_23239931_+	SINE	Alu	AluJr
CAediting_1464456	chr22_23239944_+	SINE	Alu	AluJr
CAediting_1464457	chr22_23240032_+	SINE	Alu	AluJr
CAediting_1464458	chr22_23240071_+	SINE	Alu	AluJr
CAediting_1464459	chr22_23240089_+	SINE	Alu	AluJr
CAediting_1464460	chr22_23240504_+	SINE	Alu	AluY
CAediting_1464461	chr22_23240530_+	SINE	Alu	AluY
CAediting_1464462	chr22_23240540_+	SINE	Alu	AluY
CAediting_1464463	chr22_23240557_+	SINE	Alu	AluY
CAediting_1464464	chr22_23240572_+	SINE	Alu	AluY
CAediting_1464465	chr22_23240601_+	SINE	Alu	AluY
CAediting_1464466	chr22_23243845_+	SINE	Alu	AluSx4
CAediting_1464467	chr22_23246326_+	SINE	Alu	AluJr
CAediting_1464468	chr22_23294420_+	SINE	Alu	AluSz6
CAediting_1464469	chr22_23294518_+	SINE	Alu	AluSz6
CAediting_1464470	chr22_23294530_+	SINE	Alu	AluSz6
CAediting_1464471	chr22_23296217_+	SINE	Alu	AluY
CAediting_1464472	chr22_23296227_+	SINE	Alu	AluY
CAediting_1464473	chr22_23296253_+	SINE	Alu	AluY
CAediting_1464474	chr22_23296263_+	SINE	Alu	AluY
CAediting_1464475	chr22_23296276_+	SINE	Alu	AluY
CAediting_1464476	chr22_23296286_+	SINE	Alu	AluY
CAediting_1464477	chr22_23296295_+	SINE	Alu	AluY
CAediting_1464478	chr22_23296329_+	SINE	Alu	AluY
CAediting_1464479	chr22_23296331_+	SINE	Alu	AluY
CAediting_1464480	chr22_23296700_+	SINE	Alu	FLAM_A
CAediting_1464481	chr22_23297057_+	SINE	Alu	AluJo
CAediting_1464482	chr22_23297099_+	SINE	Alu	AluJo
CAediting_1464483	chr22_23297107_+	SINE	Alu	AluJo
CAediting_1464484	chr22_23297154_+	SINE	Alu	AluJo
CAediting_1464485	chr22_23297162_+	SINE	Alu	AluJo
CAediting_1464486	chr22_23297176_+	SINE	Alu	AluJo
CAediting_1464487	chr22_23297333_+	SINE	Alu	AluJo
CAediting_1464488	chr22_23298665_+	SINE	Alu	AluSz
CAediting_1464489	chr22_23298696_+	SINE	Alu	AluSz
CAediting_1464490	chr22_23298722_+	SINE	Alu	AluSz
CAediting_1464491	chr22_23298723_+	SINE	Alu	AluSz
CAediting_1464492	chr22_23298741_+	SINE	Alu	AluSz
CAediting_1464493	chr22_23298772_+	SINE	Alu	AluSz
CAediting_1464494	chr22_23299020_+	SINE	Alu	AluYc
CAediting_1464495	chr22_23299114_+	SINE	Alu	AluYc
CAediting_1464496	chr22_23299172_+	SINE	Alu	AluYc
CAediting_1464500	chr22_23299660_+	LINE	L2	L2a
CAediting_1464501	chr22_23299671_+	LINE	L2	L2a
CAediting_1464502	chr22_23299718_+	Simple_repeat	Simple_repeat	(TA)n
CAediting_1464503	chr22_23299724_+	Simple_repeat	Simple_repeat	(TA)n
CAediting_1464505	chr22_23301102_+	SINE	Alu	AluSz
CAediting_1464506	chr22_23301126_+	SINE	Alu	AluSz
CAediting_1464507	chr22_23301127_+	SINE	Alu	AluSz
CAediting_1464508	chr22_23301128_+	SINE	Alu	AluSz
CAediting_1464509	chr22_23301139_+	SINE	Alu	AluSz
CAediting_1464510	chr22_23301142_+	SINE	Alu	AluSz
CAediting_1464511	chr22_23301143_+	SINE	Alu	AluSz
CAediting_1464512	chr22_23301148_+	SINE	Alu	AluSz
CAediting_1464513	chr22_23301151_+	SINE	Alu	AluSz
CAediting_1464514	chr22_23301152_+	SINE	Alu	AluSz
CAediting_1464515	chr22_23301153_+	SINE	Alu	AluSz
CAediting_1464516	chr22_23301154_+	SINE	Alu	AluSz
CAediting_1464517	chr22_23301155_+	SINE	Alu	AluSz
CAediting_1464518	chr22_23301156_+	SINE	Alu	AluSz
CAediting_1464519	chr22_23301159_+	SINE	Alu	AluSz
CAediting_1464520	chr22_23301163_+	SINE	Alu	AluSz
CAediting_1464521	chr22_23301238_+	SINE	Alu	AluSz
CAediting_1464522	chr22_23301255_+	SINE	Alu	AluSz
CAediting_1464531	chr22_23304129_+	SINE	Alu	AluJo
CAediting_1464532	chr22_23304837_+	SINE	Alu	AluSx1
CAediting_1464533	chr22_23304868_+	SINE	Alu	AluSx1
CAediting_1464534	chr22_23304873_+	SINE	Alu	AluSx1
CAediting_1464535	chr22_23304905_+	SINE	Alu	AluSx1
CAediting_1464536	chr22_23304929_+	SINE	Alu	AluSx1
CAediting_1464537	chr22_23304953_+	SINE	Alu	AluSx1
CAediting_1464538	chr22_23304968_+	SINE	Alu	AluSx1
CAediting_1464539	chr22_23304976_+	SINE	Alu	AluSx1
CAediting_1464540	chr22_23304994_+	SINE	Alu	AluSx1
CAediting_1464541	chr22_23304995_+	SINE	Alu	AluSx1
CAediting_1464542	chr22_23305000_+	SINE	Alu	AluSx1
CAediting_1464543	chr22_23305008_+	SINE	Alu	AluSx1
CAediting_1464544	chr22_23305021_+	SINE	Alu	AluSx1
CAediting_1464545	chr22_23305035_+	SINE	Alu	AluSx1
CAediting_1464546	chr22_23305039_+	SINE	Alu	AluSx1
CAediting_1464547	chr22_23305046_+	SINE	Alu	AluSx1
CAediting_1464548	chr22_23305096_+	SINE	Alu	AluSx1
CAediting_1464549	chr22_23307175_+	SINE	Alu	AluJb
CAediting_1464550	chr22_23307213_+	SINE	Alu	AluJb
CAediting_1464551	chr22_23307241_+	SINE	Alu	AluJb
CAediting_1464552	chr22_23307243_+	SINE	Alu	AluJb
CAediting_1464553	chr22_23308327_+	SINE	Alu	AluY
CAediting_1464554	chr22_23308331_+	SINE	Alu	AluY
CAediting_1464555	chr22_23308392_+	SINE	Alu	AluY
CAediting_1464556	chr22_23308400_+	SINE	Alu	AluY
CAediting_1464557	chr22_23308431_+	SINE	Alu	AluY
CAediting_1464558	chr22_23308432_+	SINE	Alu	AluY
CAediting_1464559	chr22_23308490_+	SINE	Alu	AluY
CAediting_1464560	chr22_23308496_+	SINE	Alu	AluY
CAediting_1464561	chr22_23308504_+	SINE	Alu	AluY
CAediting_1464562	chr22_23308512_+	SINE	Alu	AluY
CAediting_1464563	chr22_23308557_+	SINE	Alu	AluY
CAediting_1464564	chr22_23308567_+	SINE	Alu	AluY
CAediting_1464565	chr22_23308579_+	SINE	Alu	AluY

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RNA A-to-I editing events in the alternative splicing sites for BCR

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000186716.18.BCR.

Correlation between RNA A-to-I editing and PSI for ENSG00000186716.18.BCR.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for BCR

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for BCR

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for BCR

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000186716.18	ENST00000305877	hsa-miR-200b-3p	23316611	23316617	7mer-m8	23316596	23316618	163	-21.18
CAediting_1229414	chr17_67471546_+	ENSG00000186716.18	ENST00000305877	hsa-miR-548aa	23316618	23316624	7mer-m8	23316600	23316625	148	-11.69
CAediting_1229415	chr17_67471547_+	ENSG00000186716.18	ENST00000305877	hsa-miR-548aa	23317931	23317937	7mer-m8	23317915	23317938	144	-14
CAediting_1229415	chr17_67471547_+	ENSG00000186716.18	ENST00000305877	hsa-miR-548aa	23316082	23316088	7mer-m8	23316064	23316089	143	-7.43

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1524209	chrX_134546392_-	ENSG00000186716.18	ENST00000305877	hsa-miR-503-5p	23315937	23315943	7mer-m8	23315922	23315944	140	-16.71
CAediting_1229414	chr17_67471546_+	ENSG00000186716.18	ENST00000305877	hsa-miR-548aa	23315731	23315737	7mer-m8	23315714	23315738	153	-15.84
CAediting_1229415	chr17_67471547_+	ENSG00000186716.18	ENST00000305877	hsa-miR-548aa	23315731	23315737	7mer-m8	23315714	23315738	153	-15.84
CAediting_1229414	chr17_67471546_+	ENSG00000186716.18	ENST00000305877	hsa-miR-548aa	23315817	23315823	7mer-m8	23315803	23315824	155	-19.4
CAediting_1229415	chr17_67471547_+	ENSG00000186716.18	ENST00000305877	hsa-miR-548aa	23315817	23315823	7mer-m8	23315803	23315824	155	-19.4
CAediting_468389	chr6_31355314_-	ENSG00000186716.18	ENST00000305877	hsa-miR-6891-5p	23317581	23317587	7mer-m8	23317570	23317588	153	-25.63
CAediting_468389	chr6_31355314_-	ENSG00000186716.18	ENST00000305877	hsa-miR-6891-5p	23316146	23316152	7mer-m8	23316134	23316153	144	-19.01

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for BCR

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for BCR

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LAML	CAediting_1464414	chr22_23200340_+	.	.	.	.	0.0157895104730708	0.336415881858519

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Relation with cancer stages for BCR

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for BCR

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for BCR

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
BCR	P11274	DB00619	Imatinib	Breakpoint cluster region protein	SmallMoleculeDrug	approved
BCR	P11274	DB06616	Bosutinib	Breakpoint cluster region protein	SmallMoleculeDrug	approved
BCR	P11274	DB01254	Dasatinib	Breakpoint cluster region protein	SmallMoleculeDrug	approved\|investigational
BCR	P11274	DB08901	Ponatinib	Breakpoint cluster region protein	SmallMoleculeDrug	approved\|investigational

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RelatedDiseases for BCR

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
BCR	C0005586	Bipolar Disorder	4	PSYGENET
BCR	C0023473	Myeloid Leukemia, Chronic	3	CTD_human;ORPHANET
BCR	C0005699	Blast Phase	1	CTD_human
BCR	C0006413	Burkitt Lymphoma	1	ORPHANET
BCR	C0023893	Liver Cirrhosis, Experimental	1	CTD_human
BCR	C0027022	Myeloproliferative disease	1	CTD_human
BCR	C0027540	Necrosis	1	CTD_human
BCR	C0027659	Neoplasms, Experimental	1	CTD_human
BCR	C0041696	Unipolar Depression	1	PSYGENET
BCR	C1269683	Major Depressive Disorder	1	PSYGENET
BCR	C1292769	Precursor B-cell lymphoblastic leukemia	1	ORPHANET

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene