CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact

Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: MIIP (CAeditome ID:60672)

Gene summary for MIIP

check button Gene summary
Gene informationGene symbol

MIIP

Gene ID

60672

Gene namemigration and invasion inhibitory protein
SynonymsIIP45
Cytomap

1p36.22

Type of geneprotein-coding
Descriptionmigration and invasion-inhibitory proteinIGFBP2-binding proteininvasion-inhibitory protein 45
Modification date20210518
UniProtAcc

Q5JXC2

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

Top

RNA A-to-I events for MIIP

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000116691.9

check button RNA A-to-I editing events in Cancer.
CAediting_13565(12023122, +), CAediting_13566(12023190, +), CAediting_13567(12023203, +), CAediting_13568(12023243, +), CAediting_13569(12023311, +), CAediting_13570(12023326, +), CAediting_13571(12023332, +), CAediting_13572(12023497, +), CAediting_13573(12023833, +), CAediting_13574(12023838, +), CAediting_13575(12023874, +), CAediting_13576(12024457, +), CAediting_13577(12024462, +), CAediting_13578(12024470, +), CAediting_13579(12024513, +), CAediting_13580(12024514, +), CAediting_13581(12024543, +), CAediting_13582(12024553, +), CAediting_13583(12024555, +), CAediting_13584(12024597, +), CAediting_13585(12024645, +), CAediting_13586(12024663, +), CAediting_13587(12024673, +), CAediting_13588(12025839, +), CAediting_13589(12026085, +), CAediting_13590(12026090, +), CAediting_13591(12026140, +), CAediting_13592(12026143, +), CAediting_13593(12026145, +), CAediting_13594(12026146, +), CAediting_13595(12026147, +), CAediting_13596(12026149, +), CAediting_13597(12026152, +), CAediting_13598(12026154, +), CAediting_13599(12026155, +), CAediting_13600(12026158, +), CAediting_13601(12026162, +), CAediting_13602(12026184, +), CAediting_13603(12026185, +), CAediting_13604(12026190, +), CAediting_13605(12026194, +), CAediting_13606(12026198, +), CAediting_13607(12026211, +), CAediting_13608(12026225, +), CAediting_13609(12026234, +), CAediting_13610(12026253, +), CAediting_13611(12026257, +), CAediting_13612(12026288, +), CAediting_13613(12026289, +), CAediting_13614(12026293, +), CAediting_13615(12027045, +), CAediting_13616(12027078, +), CAediting_13617(12027102, +), CAediting_13618(12027108, +), CAediting_13619(12027109, +), CAediting_13620(12027134, +), CAediting_13621(12027135, +), CAediting_13622(12027148, +), CAediting_13623(12027150, +), CAediting_13624(12027154, +), CAediting_13625(12027158, +), CAediting_13626(12027183, +), CAediting_13627(12027193, +), CAediting_13628(12027195, +), CAediting_13629(12027199, +), CAediting_13630(12027244, +), CAediting_13631(12027245, +), CAediting_13632(12027271, +), CAediting_13633(12027272, +), CAediting_13634(12027284, +), CAediting_13635(12027290, +), CAediting_13636(12027957, +), CAediting_13637(12027962, +), CAediting_13638(12027965, +), CAediting_13639(12027997, +), CAediting_13640(12028031, +), CAediting_13641(12028042, +), CAediting_13642(12028047, +), CAediting_13643(12028048, +), CAediting_13644(12028049, +), CAediting_13645(12028051, +), CAediting_13646(12028054, +), CAediting_13647(12028056, +), CAediting_13648(12028057, +), CAediting_13649(12028060, +), CAediting_13650(12028086, +), CAediting_13651(12028116, +), CAediting_13652(12028119, +), CAediting_13653(12028127, +), CAediting_13654(12028128, +), CAediting_13655(12028135, +), CAediting_13656(12028152, +), CAediting_13657(12028157, +), CAediting_13658(12030707, +), CAediting_13659(12030720, +), CAediting_13660(12031801, +),

Top

RNA editing positional annotations for MIIP using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_13660chr1_12031801_+nonsynonymous SNVENST00000235332.5c.A1160Gp.K387RDBN

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_13565chr1_12023122_+ncRNA_intronic
CAediting_13566chr1_12023190_+ncRNA_intronic
CAediting_13567chr1_12023203_+ncRNA_intronic
CAediting_13568chr1_12023243_+ncRNA_intronic
CAediting_13569chr1_12023311_+ncRNA_intronic
CAediting_13570chr1_12023326_+ncRNA_intronic
CAediting_13571chr1_12023332_+ncRNA_intronic
CAediting_13572chr1_12023497_+ncRNA_intronic
CAediting_13573chr1_12023833_+ncRNA_intronic
CAediting_13574chr1_12023838_+ncRNA_intronic
CAediting_13575chr1_12023874_+ncRNA_intronic
CAediting_13576chr1_12024457_+ncRNA_intronic
CAediting_13577chr1_12024462_+ncRNA_intronic
CAediting_13578chr1_12024470_+ncRNA_intronic
CAediting_13579chr1_12024513_+ncRNA_intronic
CAediting_13580chr1_12024514_+ncRNA_intronic
CAediting_13581chr1_12024543_+ncRNA_intronic
CAediting_13582chr1_12024553_+ncRNA_intronic
CAediting_13583chr1_12024555_+ncRNA_intronic
CAediting_13584chr1_12024597_+ncRNA_intronic
CAediting_13585chr1_12024645_+ncRNA_intronic
CAediting_13586chr1_12024663_+ncRNA_intronic
CAediting_13587chr1_12024673_+ncRNA_intronic
CAediting_13588chr1_12025839_+ncRNA_intronic
CAediting_13589chr1_12026085_+ncRNA_intronic
CAediting_13590chr1_12026090_+ncRNA_intronic
CAediting_13591chr1_12026140_+ncRNA_intronic
CAediting_13592chr1_12026143_+ncRNA_intronic
CAediting_13593chr1_12026145_+ncRNA_intronic
CAediting_13594chr1_12026146_+ncRNA_intronic
CAediting_13595chr1_12026147_+ncRNA_intronic
CAediting_13596chr1_12026149_+ncRNA_intronic
CAediting_13597chr1_12026152_+ncRNA_intronic
CAediting_13598chr1_12026154_+ncRNA_intronic
CAediting_13599chr1_12026155_+ncRNA_intronic
CAediting_13600chr1_12026158_+ncRNA_intronic
CAediting_13601chr1_12026162_+ncRNA_intronic
CAediting_13602chr1_12026184_+ncRNA_intronic
CAediting_13603chr1_12026185_+ncRNA_intronic
CAediting_13604chr1_12026190_+ncRNA_intronic
CAediting_13605chr1_12026194_+ncRNA_intronic
CAediting_13606chr1_12026198_+ncRNA_intronic
CAediting_13607chr1_12026211_+ncRNA_intronic
CAediting_13608chr1_12026225_+ncRNA_intronic
CAediting_13609chr1_12026234_+ncRNA_intronic
CAediting_13610chr1_12026253_+ncRNA_intronic
CAediting_13611chr1_12026257_+ncRNA_intronic
CAediting_13612chr1_12026288_+ncRNA_intronic
CAediting_13613chr1_12026289_+ncRNA_intronic
CAediting_13614chr1_12026293_+ncRNA_intronic
CAediting_13615chr1_12027045_+ncRNA_intronic
CAediting_13616chr1_12027078_+ncRNA_intronic
CAediting_13617chr1_12027102_+ncRNA_intronic
CAediting_13618chr1_12027108_+ncRNA_intronic
CAediting_13619chr1_12027109_+ncRNA_intronic
CAediting_13620chr1_12027134_+ncRNA_intronic
CAediting_13621chr1_12027135_+ncRNA_intronic
CAediting_13622chr1_12027148_+ncRNA_intronic
CAediting_13623chr1_12027150_+ncRNA_intronic
CAediting_13624chr1_12027154_+ncRNA_intronic
CAediting_13625chr1_12027158_+ncRNA_intronic
CAediting_13626chr1_12027183_+ncRNA_intronic
CAediting_13627chr1_12027193_+ncRNA_intronic
CAediting_13628chr1_12027195_+ncRNA_intronic
CAediting_13629chr1_12027199_+ncRNA_intronic
CAediting_13630chr1_12027244_+ncRNA_intronic
CAediting_13631chr1_12027245_+ncRNA_intronic
CAediting_13632chr1_12027271_+ncRNA_intronic
CAediting_13633chr1_12027272_+ncRNA_intronic
CAediting_13634chr1_12027284_+ncRNA_intronic
CAediting_13635chr1_12027290_+ncRNA_intronic
CAediting_13636chr1_12027957_+ncRNA_intronic
CAediting_13637chr1_12027962_+ncRNA_intronic
CAediting_13638chr1_12027965_+ncRNA_intronic
CAediting_13639chr1_12027997_+ncRNA_intronic
CAediting_13640chr1_12028031_+ncRNA_intronic
CAediting_13641chr1_12028042_+ncRNA_intronic
CAediting_13642chr1_12028047_+ncRNA_intronic
CAediting_13643chr1_12028048_+ncRNA_intronic
CAediting_13644chr1_12028049_+ncRNA_intronic
CAediting_13645chr1_12028051_+ncRNA_intronic
CAediting_13646chr1_12028054_+ncRNA_intronic
CAediting_13647chr1_12028056_+ncRNA_intronic
CAediting_13648chr1_12028057_+ncRNA_intronic
CAediting_13649chr1_12028060_+ncRNA_intronic
CAediting_13650chr1_12028086_+ncRNA_intronic
CAediting_13651chr1_12028116_+ncRNA_intronic
CAediting_13652chr1_12028119_+ncRNA_intronic
CAediting_13653chr1_12028127_+ncRNA_intronic
CAediting_13654chr1_12028128_+ncRNA_intronic
CAediting_13655chr1_12028135_+ncRNA_intronic
CAediting_13656chr1_12028152_+ncRNA_intronic
CAediting_13657chr1_12028157_+ncRNA_intronic
CAediting_13658chr1_12030707_+ncRNA_intronic
CAediting_13659chr1_12030720_+ncRNA_intronic
CAediting_13660chr1_12031801_+exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_13565chr1_12023122_+SINEAluAluSz
CAediting_13566chr1_12023190_+SINEAluAluSz
CAediting_13567chr1_12023203_+SINEAluAluSz
CAediting_13568chr1_12023243_+SINEAluAluSz
CAediting_13569chr1_12023311_+SINEAluAluSz
CAediting_13570chr1_12023326_+SINEAluAluSz
CAediting_13571chr1_12023332_+SINEAluAluSz
CAediting_13572chr1_12023497_+SINEAluAluYc
CAediting_13573chr1_12023833_+SINEAluAluSg
CAediting_13574chr1_12023838_+SINEAluAluSg
CAediting_13575chr1_12023874_+SINEAluAluSg
CAediting_13576chr1_12024457_+SINEAluAluSq2
CAediting_13577chr1_12024462_+SINEAluAluSq2
CAediting_13578chr1_12024470_+SINEAluAluSq2
CAediting_13579chr1_12024513_+SINEAluAluSq2
CAediting_13580chr1_12024514_+SINEAluAluSq2
CAediting_13581chr1_12024543_+SINEAluAluSq2
CAediting_13582chr1_12024553_+SINEAluAluSq2
CAediting_13583chr1_12024555_+SINEAluAluSq2
CAediting_13584chr1_12024597_+SINEAluAluSq2
CAediting_13585chr1_12024645_+SINEAluAluSq2
CAediting_13586chr1_12024663_+SINEAluAluSq2
CAediting_13587chr1_12024673_+SINEAluAluSq2
CAediting_13588chr1_12025839_+SINEAluAluSq
CAediting_13589chr1_12026085_+SINEAluAluSx1
CAediting_13590chr1_12026090_+SINEAluAluSx1
CAediting_13591chr1_12026140_+SINEAluAluSx1
CAediting_13592chr1_12026143_+SINEAluAluSx1
CAediting_13593chr1_12026145_+SINEAluAluSx1
CAediting_13594chr1_12026146_+SINEAluAluSx1
CAediting_13595chr1_12026147_+SINEAluAluSx1
CAediting_13596chr1_12026149_+SINEAluAluSx1
CAediting_13597chr1_12026152_+SINEAluAluSx1
CAediting_13598chr1_12026154_+SINEAluAluSx1
CAediting_13599chr1_12026155_+SINEAluAluSx1
CAediting_13600chr1_12026158_+SINEAluAluSx1
CAediting_13601chr1_12026162_+SINEAluAluSx1
CAediting_13602chr1_12026184_+SINEAluAluSx1
CAediting_13603chr1_12026185_+SINEAluAluSx1
CAediting_13604chr1_12026190_+SINEAluAluSx1
CAediting_13605chr1_12026194_+SINEAluAluSx1
CAediting_13606chr1_12026198_+SINEAluAluSx1
CAediting_13607chr1_12026211_+SINEAluAluSx1
CAediting_13608chr1_12026225_+SINEAluAluSx1
CAediting_13609chr1_12026234_+SINEAluAluSx1
CAediting_13610chr1_12026253_+SINEAluAluSx1
CAediting_13611chr1_12026257_+SINEAluAluSx1
CAediting_13612chr1_12026288_+SINEAluAluSx1
CAediting_13613chr1_12026289_+SINEAluAluSx1
CAediting_13614chr1_12026293_+SINEAluAluSx1
CAediting_13615chr1_12027045_+SINEAluAluSz
CAediting_13616chr1_12027078_+SINEAluAluSz
CAediting_13617chr1_12027102_+SINEAluAluSz
CAediting_13618chr1_12027108_+SINEAluAluSz
CAediting_13619chr1_12027109_+SINEAluAluSz
CAediting_13620chr1_12027134_+SINEAluAluSz
CAediting_13621chr1_12027135_+SINEAluAluSz
CAediting_13622chr1_12027148_+SINEAluAluSz
CAediting_13623chr1_12027150_+SINEAluAluSz
CAediting_13624chr1_12027154_+SINEAluAluSz
CAediting_13625chr1_12027158_+SINEAluAluSz
CAediting_13626chr1_12027183_+SINEAluAluSz
CAediting_13627chr1_12027193_+SINEAluAluSz
CAediting_13628chr1_12027195_+SINEAluAluSz
CAediting_13629chr1_12027199_+SINEAluAluSz
CAediting_13630chr1_12027244_+SINEAluAluSz
CAediting_13631chr1_12027245_+SINEAluAluSz
CAediting_13632chr1_12027271_+SINEAluAluSz
CAediting_13633chr1_12027272_+SINEAluAluSz
CAediting_13634chr1_12027284_+SINEAluAluSz
CAediting_13635chr1_12027290_+SINEAluAluSz
CAediting_13636chr1_12027957_+SINEAluAluSg
CAediting_13637chr1_12027962_+SINEAluAluSg
CAediting_13638chr1_12027965_+SINEAluAluSg
CAediting_13639chr1_12027997_+SINEAluAluSg
CAediting_13640chr1_12028031_+SINEAluAluSg
CAediting_13641chr1_12028042_+SINEAluAluSg
CAediting_13642chr1_12028047_+SINEAluAluSg
CAediting_13643chr1_12028048_+SINEAluAluSg
CAediting_13644chr1_12028049_+SINEAluAluSg
CAediting_13645chr1_12028051_+SINEAluAluSg
CAediting_13646chr1_12028054_+SINEAluAluSg
CAediting_13647chr1_12028056_+SINEAluAluSg
CAediting_13648chr1_12028057_+SINEAluAluSg
CAediting_13649chr1_12028060_+SINEAluAluSg
CAediting_13650chr1_12028086_+SINEAluAluSg
CAediting_13651chr1_12028116_+SINEAluAluSg
CAediting_13652chr1_12028119_+SINEAluAluSg
CAediting_13653chr1_12028127_+SINEAluAluSg
CAediting_13654chr1_12028128_+SINEAluAluSg
CAediting_13655chr1_12028135_+SINEAluAluSg
CAediting_13656chr1_12028152_+SINEAluAluSg
CAediting_13657chr1_12028157_+SINEAluAluSg
CAediting_13658chr1_12030707_+SINEAluAluSx3
CAediting_13659chr1_12030720_+SINEAluAluSx3

Top

RNA A-to-I editing events in the alternative splicing sites for MIIP

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000116691.9.MIIP.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000116691.9.MIIP.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for MIIP

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for MIIP

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.
all structure


Top

The effects of the RNA editing to the miRNA binding sites for MIIP

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000116691.9ENST00000235332hsa-miR-200b-3p12031829120318357mer-m81203181512031836140-13.22
CAediting_1368054chr19_46709310_-ENSG00000116691.9ENST00000235332hsa-miR-320e12031898120319058mer-1a1203188812031905148-20.67
CAediting_524911chr7_5495852_-ENSG00000116691.9ENST00000235332hsa-miR-589-3p12032030120320367mer-m81203201412032037140-12.86
CAediting_1524209chrX_134546392_-ENSG00000116691.9ENST00000235332hsa-miR-503-5p12031953120319586mer1203193912031959140-19.92

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for MIIP

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000235332.5protein_codingSoverviewSoverview
ENST00000466860.4processed_transcriptSoverviewSoverview
ENST00000498685.4processed_transcriptSoverviewSoverview
ENST00000460823.1processed_transcriptSoverviewSoverview
ENST00000478299.1processed_transcriptSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_13660ENST00000235332.5chr1_12031801_+-716.20-715.20-716.20
CAediting_13660ENST00000466860.4chr1_12031801_+-816.60-816.70-816.60
CAediting_13660ENST00000498685.4chr1_12031801_+-665.30-664.20-665.30
CAediting_13660ENST00000460823.1chr1_12031801_+-397.30-394.60-397.30
CAediting_13660ENST00000478299.1chr1_12031801_+-270.20-265.40-270.20

Top

Relation with ADAR for MIIP

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

Top

Relation with cancer stages for MIIP

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

Top

Relation with survival for MIIP

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

Top

RelatedDrugs for MIIP

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for MIIP

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource