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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: RENBP (CAeditome ID:5973)

Gene summary for RENBP

check button Gene summary
Gene informationGene symbol

RENBP

Gene ID

5973

Gene namerenin binding protein
SynonymsRBP|RNBP
Cytomap

Xq28

Type of geneprotein-coding
DescriptionN-acylglucosamine 2-epimeraseAGEGlcNAc 2-epimeraseN-acetyl-D-glucosamine 2-epimerase
Modification date20210518
UniProtAcc

P51606

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for RENBP

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000102032.11
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1527087(153935913, -), CAediting_1527088(153935967, -), CAediting_1527089(153936004, -), CAediting_1527090(153936033, -), CAediting_1527091(153936046, -), CAediting_1527092(153936050, -), CAediting_1527093(153936051, -), CAediting_1527094(153936070, -), CAediting_1527095(153936071, -), CAediting_1527096(153936076, -), CAediting_1527097(153936263, -), CAediting_1527098(153936318, -), CAediting_1527099(153936326, -), CAediting_1527100(153936343, -), CAediting_1527101(153936384, -), CAediting_1527102(153936938, -), CAediting_1527103(153936979, -), CAediting_1527104(153937014, -), CAediting_1527105(153937017, -), CAediting_1527106(153937045, -), CAediting_1527107(153937079, -), CAediting_1527108(153937093, -), CAediting_1527109(153937101, -), CAediting_1527110(153937106, -), CAediting_1527111(153937118, -), CAediting_1527112(153937139, -), CAediting_1527113(153937144, -), CAediting_1527114(153937157, -), CAediting_1527115(153937465, -), CAediting_1527116(153937504, -), CAediting_1527117(153937514, -), CAediting_1527118(153937518, -), CAediting_1527119(153937525, -), CAediting_1527120(153937553, -), CAediting_1527121(153937556, -), CAediting_1527122(153937566, -), CAediting_1527123(153937579, -), CAediting_1527124(153937606, -), CAediting_1527125(153937623, -), CAediting_1527126(153937704, -), CAediting_1527127(153937730, -), CAediting_1527128(153937763, -), CAediting_1527129(153937841, -), CAediting_1527130(153938854, -), CAediting_1527131(153938879, -), CAediting_1527132(153938899, -), CAediting_1527133(153938905, -), CAediting_1527134(153938931, -), CAediting_1527135(153938932, -), CAediting_1527136(153939186, -), CAediting_1527137(153939199, -), CAediting_1527138(153939203, -), CAediting_1527139(153939212, -), CAediting_1527140(153939257, -), CAediting_1527141(153939263, -), CAediting_1527142(153939264, -), CAediting_1527143(153939269, -), CAediting_1527144(153939285, -), CAediting_1527145(153939286, -), CAediting_1527146(153939288, -), CAediting_1527147(153939290, -), CAediting_1527148(153939303, -), CAediting_1527149(153939304, -), CAediting_1527150(153939305, -), CAediting_1527151(153939351, -), CAediting_1527152(153939359, -), CAediting_1527153(153939362, -), CAediting_1527154(153942329, -), CAediting_1527155(153942333, -), CAediting_1527156(153942334, -), CAediting_1527157(153942348, -),

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RNA editing positional annotations for RENBP using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_1527090chrX_153936033_-nonsynonymous SNVENST00000451114.1c.A187Gp.S63GD.N
CAediting_1527092chrX_153936050_-nonsynonymous SNVENST00000451114.1c.A170Gp.K57RD.N
CAediting_1527093chrX_153936051_-nonsynonymous SNVENST00000451114.1c.A169Gp.K57ED.N
CAediting_1527095chrX_153936071_-nonsynonymous SNVENST00000451114.1c.A149Gp.Q50RD.N

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1527087chrX_153935913_-intronic
CAediting_1527088chrX_153935967_-intronic
CAediting_1527089chrX_153936004_-exonic
CAediting_1527090chrX_153936033_-exonic
CAediting_1527091chrX_153936046_-exonic
CAediting_1527092chrX_153936050_-exonic
CAediting_1527093chrX_153936051_-exonic
CAediting_1527094chrX_153936070_-exonic
CAediting_1527095chrX_153936071_-exonic
CAediting_1527096chrX_153936076_-exonic
CAediting_1527097chrX_153936263_-intronic
CAediting_1527098chrX_153936318_-intronic
CAediting_1527099chrX_153936326_-intronic
CAediting_1527100chrX_153936343_-intronic
CAediting_1527101chrX_153936384_-intronic
CAediting_1527102chrX_153936938_-intronic
CAediting_1527103chrX_153936979_-intronic
CAediting_1527104chrX_153937014_-intronic
CAediting_1527105chrX_153937017_-intronic
CAediting_1527106chrX_153937045_-intronic
CAediting_1527107chrX_153937079_-intronic
CAediting_1527108chrX_153937093_-UTR3
CAediting_1527109chrX_153937101_-UTR3
CAediting_1527110chrX_153937106_-UTR3
CAediting_1527111chrX_153937118_-UTR3
CAediting_1527112chrX_153937139_-UTR3
CAediting_1527113chrX_153937144_-UTR3
CAediting_1527114chrX_153937157_-UTR3
CAediting_1527115chrX_153937465_-intronic
CAediting_1527116chrX_153937504_-intronic
CAediting_1527117chrX_153937514_-intronic
CAediting_1527118chrX_153937518_-intronic
CAediting_1527119chrX_153937525_-intronic
CAediting_1527120chrX_153937553_-intronic
CAediting_1527121chrX_153937556_-intronic
CAediting_1527122chrX_153937566_-intronic
CAediting_1527123chrX_153937579_-intronic
CAediting_1527124chrX_153937606_-intronic
CAediting_1527125chrX_153937623_-intronic
CAediting_1527126chrX_153937704_-intronic
CAediting_1527127chrX_153937730_-intronic
CAediting_1527128chrX_153937763_-intronic
CAediting_1527129chrX_153937841_-intronic
CAediting_1527130chrX_153938854_-intronic
CAediting_1527131chrX_153938879_-intronic
CAediting_1527132chrX_153938899_-intronic
CAediting_1527133chrX_153938905_-intronic
CAediting_1527134chrX_153938931_-intronic
CAediting_1527135chrX_153938932_-intronic
CAediting_1527136chrX_153939186_-intronic
CAediting_1527137chrX_153939199_-intronic
CAediting_1527138chrX_153939203_-intronic
CAediting_1527139chrX_153939212_-intronic
CAediting_1527140chrX_153939257_-intronic
CAediting_1527141chrX_153939263_-intronic
CAediting_1527142chrX_153939264_-intronic
CAediting_1527143chrX_153939269_-intronic
CAediting_1527144chrX_153939285_-intronic
CAediting_1527145chrX_153939286_-intronic
CAediting_1527146chrX_153939288_-intronic
CAediting_1527147chrX_153939290_-intronic
CAediting_1527148chrX_153939303_-intronic
CAediting_1527149chrX_153939304_-intronic
CAediting_1527150chrX_153939305_-intronic
CAediting_1527151chrX_153939351_-intronic
CAediting_1527152chrX_153939359_-intronic
CAediting_1527153chrX_153939362_-intronic
CAediting_1527154chrX_153942329_-ncRNA_exonic
CAediting_1527155chrX_153942333_-ncRNA_exonic
CAediting_1527156chrX_153942334_-ncRNA_exonic
CAediting_1527157chrX_153942348_-ncRNA_exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1527087chrX_153935913_-SINEAluAluSx
CAediting_1527088chrX_153935967_-SINEAluAluSx
CAediting_1527089chrX_153936004_-SINEAluAluSx
CAediting_1527090chrX_153936033_-SINEAluAluSx
CAediting_1527091chrX_153936046_-SINEAluAluSx
CAediting_1527092chrX_153936050_-SINEAluAluSx
CAediting_1527093chrX_153936051_-SINEAluAluSx
CAediting_1527094chrX_153936070_-SINEAluAluSx
CAediting_1527095chrX_153936071_-SINEAluAluSx
CAediting_1527096chrX_153936076_-SINEAluAluSx
CAediting_1527097chrX_153936263_-SINEAluAluY
CAediting_1527098chrX_153936318_-SINEAluAluY
CAediting_1527099chrX_153936326_-SINEAluAluY
CAediting_1527100chrX_153936343_-SINEAluAluY
CAediting_1527101chrX_153936384_-SINEAluAluY
CAediting_1527102chrX_153936938_-SINEAluAluJr
CAediting_1527103chrX_153936979_-SINEAluAluJr
CAediting_1527104chrX_153937014_-SINEAluAluJr
CAediting_1527105chrX_153937017_-SINEAluAluJr
CAediting_1527106chrX_153937045_-SINEAluAluJr
CAediting_1527107chrX_153937079_-SINEAluAluJr
CAediting_1527108chrX_153937093_-SINEAluAluJr
CAediting_1527109chrX_153937101_-SINEAluAluJr
CAediting_1527110chrX_153937106_-SINEAluAluJr
CAediting_1527111chrX_153937118_-SINEAluAluJr
CAediting_1527112chrX_153937139_-SINEAluAluJr
CAediting_1527113chrX_153937144_-SINEAluAluJr
CAediting_1527114chrX_153937157_-SINEAluAluJr
CAediting_1527115chrX_153937465_-SINEAluAluSq2
CAediting_1527116chrX_153937504_-SINEAluAluSq2
CAediting_1527117chrX_153937514_-SINEAluAluSq2
CAediting_1527118chrX_153937518_-SINEAluAluSq2
CAediting_1527119chrX_153937525_-SINEAluAluSq2
CAediting_1527120chrX_153937553_-SINEAluAluSq2
CAediting_1527121chrX_153937556_-SINEAluAluSq2
CAediting_1527122chrX_153937566_-SINEAluAluSq2
CAediting_1527123chrX_153937579_-SINEAluAluSq2
CAediting_1527124chrX_153937606_-SINEAluAluSq2
CAediting_1527125chrX_153937623_-SINEAluAluSq
CAediting_1527126chrX_153937704_-SINEAluAluSq
CAediting_1527127chrX_153937730_-SINEAluAluSq
CAediting_1527128chrX_153937763_-SINEAluAluSq
CAediting_1527129chrX_153937841_-SINEAluAluSq
CAediting_1527130chrX_153938854_-SINEAluAluSq10
CAediting_1527131chrX_153938879_-SINEAluAluSq10
CAediting_1527132chrX_153938899_-SINEAluAluSq10
CAediting_1527133chrX_153938905_-SINEAluAluSq10
CAediting_1527134chrX_153938931_-SINEAluAluSq10
CAediting_1527135chrX_153938932_-SINEAluAluSq10
CAediting_1527136chrX_153939186_-SINEAluAluJo
CAediting_1527137chrX_153939199_-SINEAluAluJo
CAediting_1527138chrX_153939203_-SINEAluAluJo
CAediting_1527139chrX_153939212_-SINEAluAluJo
CAediting_1527140chrX_153939257_-SINEAluAluJo
CAediting_1527141chrX_153939263_-SINEAluAluJo
CAediting_1527142chrX_153939264_-SINEAluAluJo
CAediting_1527143chrX_153939269_-SINEAluAluJo
CAediting_1527144chrX_153939285_-SINEAluAluJo
CAediting_1527145chrX_153939286_-SINEAluAluJo
CAediting_1527146chrX_153939288_-SINEAluAluJo
CAediting_1527147chrX_153939290_-SINEAluAluJo
CAediting_1527148chrX_153939303_-SINEAluAluJo
CAediting_1527149chrX_153939304_-SINEAluAluJo
CAediting_1527150chrX_153939305_-SINEAluAluJo
CAediting_1527151chrX_153939351_-SINEAluAluJo
CAediting_1527152chrX_153939359_-SINEAluAluJo
CAediting_1527153chrX_153939362_-SINEAluAluJo
CAediting_1527154chrX_153942329_-SINEAluAluSx
CAediting_1527155chrX_153942333_-SINEAluAluSx
CAediting_1527156chrX_153942334_-SINEAluAluSx
CAediting_1527157chrX_153942348_-SINEAluAluSx

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RNA A-to-I editing events in the alternative splicing sites for RENBP

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_1527089chrX_153936004_-153935997:1539360055SS2+0iAAGTGCGTG-17.91AGGTGCGTG-24.83
ESCAediting_1527108chrX_153937093_-153937085:1539370935SS3+0iAGGTAGCTG-17.37GGGTAGCTG-19.65

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000102032.11.RENBP.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000102032.11.RENBP.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RENBP

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
SKCM.CAediting_1527089.ENSG00000102032.RENBP.png
Soverview

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Protein coding region RNA A-to-I editings for RENBP

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for RENBP

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1527089chrX_153936004_-ENSG00000102032.11ENST00000442361hsa-miR-6804-3p1539360001539360067mer-m8153935999153936021148.00-26.81
CAediting_1527091chrX_153936046_-ENSG00000102032.11ENST00000457282hsa-miR-47731539360421539360487mer-m8153936041153936065159.00-23.53
CAediting_1527091chrX_153936046_-ENSG00000102032.11ENST00000457282hsa-miR-47731539360421539360487mer-m8153936041153936065159.00-23.53
CAediting_1527091chrX_153936046_-ENSG00000102032.11ENST00000442361hsa-miR-47731539360421539360487mer-m8153936041153936065159.00-23.53
CAediting_1527091chrX_153936046_-ENSG00000102032.11ENST00000442361hsa-miR-47731539360421539360487mer-m8153936041153936065159.00-23.53
CAediting_1527092chrX_153936050_-ENSG00000102032.11ENST00000457282hsa-miR-42931539360461539360538mer-1a153936046153936065148.00-16.98
CAediting_1527092chrX_153936050_-ENSG00000102032.11ENST00000442361hsa-miR-42931539360461539360538mer-1a153936046153936065148.00-16.98
CAediting_1527094chrX_153936070_-ENSG00000102032.11ENST00000457282hsa-miR-17-3p1539360701539360767mer-m8153936069153936090150.00-18.47
CAediting_1527094chrX_153936070_-ENSG00000102032.11ENST00000457282hsa-miR-39291539360671539360726mer153936066153936090140.00-27.65
CAediting_1527094chrX_153936070_-ENSG00000102032.11ENST00000457282hsa-miR-485-5p1539360661539360727mer-m8153936065153936088156.00-19.43
CAediting_1527094chrX_153936070_-ENSG00000102032.11ENST00000457282hsa-miR-6884-5p1539360661539360727mer-m8153936065153936088154.00-24.34
CAediting_1527094chrX_153936070_-ENSG00000102032.11ENST00000442361hsa-miR-17-3p1539360701539360767mer-m8153936069153936090150.00-18.47
CAediting_1527094chrX_153936070_-ENSG00000102032.11ENST00000442361hsa-miR-39291539360671539360726mer153936066153936090140.00-27.65
CAediting_1527094chrX_153936070_-ENSG00000102032.11ENST00000442361hsa-miR-485-5p1539360661539360727mer-m8153936065153936088156.00-19.43
CAediting_1527094chrX_153936070_-ENSG00000102032.11ENST00000442361hsa-miR-6884-5p1539360661539360727mer-m8153936065153936088154.00-24.34
CAediting_1527110chrX_153937106_-ENSG00000102032.11ENST00000457282hsa-miR-61251539371061539371127mer-m8153937105153937124140.00-21.80
CAediting_1527110chrX_153937106_-ENSG00000102032.11ENST00000457282hsa-miR-6765-5p1539371011539371077mer-m8153937100153937121151.00-25.11
CAediting_1527111chrX_153937118_-ENSG00000102032.11ENST00000457282hsa-miR-1199-5p1539371181539371247mer-m8153937117153937136156.00-28.57
CAediting_1527111chrX_153937118_-ENSG00000102032.11ENST00000457282hsa-miR-60781539371141539371218mer-1a153937114153937133152.00-22.59
CAediting_1527111chrX_153937118_-ENSG00000102032.11ENST00000457282hsa-miR-6751-3p1539371181539371247mer-m8153937117153937137141.00-13.15
CAediting_1527112chrX_153937139_-ENSG00000102032.11ENST00000457282hsa-miR-106b-3p1539371391539371457mer-m8153937138153937160145.00-22.84
CAediting_1527113chrX_153937144_-ENSG00000102032.11ENST00000457282hsa-miR-615-3p1539371431539371497mer-m8153937142153937164155.00-22.58

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1527113chrX_153937144_-ENSG00000102032.11ENST00000457282hsa-miR-1199-5p1539371431539371497mer-m8153937142153937161146-17.48
CAediting_1527110chrX_153937106_-ENSG00000102032.11ENST00000457282hsa-miR-121141539371031539371097mer-m8153937102153937120149-17.06
CAediting_1527110chrX_153937106_-ENSG00000102032.11ENST00000457282hsa-miR-3190-3p1539371051539371117mer-m8153937104153937126145-19.77
CAediting_1527112chrX_153937139_-ENSG00000102032.11ENST00000457282hsa-miR-485-5p1539371331539371408mer-1a153937133153937157150-23.51
CAediting_1527113chrX_153937144_-ENSG00000102032.11ENST00000457282hsa-miR-6751-3p1539371431539371497mer-m8153937142153937162140-17.41
CAediting_1527108chrX_153937093_-ENSG00000102032.11ENST00000457282hsa-miR-6776-5p1539370921539370987mer-m8153937092153937110152-20.62
CAediting_1527113chrX_153937144_-ENSG00000102032.11ENST00000457282hsa-miR-6807-5p1539371441539371507mer-m8153937143153937162144-14.61
CAediting_1527112chrX_153937139_-ENSG00000102032.11ENST00000457282hsa-miR-6884-5p1539371331539371408mer-1a153937133153937155146-17.59
CAediting_1527109chrX_153937101_-ENSG00000102032.11ENST00000457282hsa-miR-7160-5p1539370991539371057mer-m8153937098153937118146-20.03
CAediting_1527096chrX_153936076_-ENSG00000102032.11ENST00000457282hsa-miR-31741539360741539360796mer153936073153936093146-25.35
CAediting_1527094chrX_153936070_-ENSG00000102032.11ENST00000457282hsa-miR-377-5p1539360661539360727mer-m8153936065153936088154-17.48
CAediting_1527095chrX_153936071_-ENSG00000102032.11ENST00000457282hsa-miR-377-5p1539360661539360727mer-m8153936065153936088154-17.48
CAediting_1527090chrX_153936033_-ENSG00000102032.11ENST00000457282hsa-miR-44781539360291539360357mer-m8153936028153936044151-27.88
CAediting_1527090chrX_153936033_-ENSG00000102032.11ENST00000457282hsa-miR-4649-3p1539360321539360387mer-m8153936031153936051140-13.09
CAediting_1527094chrX_153936070_-ENSG00000102032.11ENST00000457282hsa-miR-60861539360661539360727mer-m8153936065153936084150-23.6
CAediting_1527095chrX_153936071_-ENSG00000102032.11ENST00000457282hsa-miR-60861539360661539360727mer-m8153936065153936084150-23.6
CAediting_1527094chrX_153936070_-ENSG00000102032.11ENST00000457282hsa-miR-6516-5p1539360701539360767mer-m8153936069153936088148-12.72
CAediting_1527095chrX_153936071_-ENSG00000102032.11ENST00000457282hsa-miR-6516-5p1539360701539360767mer-m8153936069153936088148-12.72
CAediting_1527090chrX_153936033_-ENSG00000102032.11ENST00000457282hsa-miR-6884-5p1539360281539360347mer-m8153936027153936047155-21.75
CAediting_1527090chrX_153936033_-ENSG00000102032.11ENST00000457282hsa-miR-7160-5p1539360311539360377mer-m8153936030153936048147-20.43
CAediting_1527090chrX_153936033_-ENSG00000102032.11ENST00000457282hsa-miR-7162-3p1539360321539360376mer153936031153936049141-19.59
CAediting_1527096chrX_153936076_-ENSG00000102032.11ENST00000442361hsa-miR-31741539360741539360796mer153936073153936093146-25.35
CAediting_1527094chrX_153936070_-ENSG00000102032.11ENST00000442361hsa-miR-377-5p1539360661539360727mer-m8153936065153936088154-17.48
CAediting_1527095chrX_153936071_-ENSG00000102032.11ENST00000442361hsa-miR-377-5p1539360661539360727mer-m8153936065153936088154-17.48
CAediting_1527090chrX_153936033_-ENSG00000102032.11ENST00000442361hsa-miR-44781539360291539360357mer-m8153936028153936044151-27.88
CAediting_1527090chrX_153936033_-ENSG00000102032.11ENST00000442361hsa-miR-4649-3p1539360321539360387mer-m8153936031153936051140-13.09
CAediting_1527094chrX_153936070_-ENSG00000102032.11ENST00000442361hsa-miR-60861539360661539360727mer-m8153936065153936084150-23.6
CAediting_1527095chrX_153936071_-ENSG00000102032.11ENST00000442361hsa-miR-60861539360661539360727mer-m8153936065153936084150-23.6
CAediting_1527089chrX_153936004_-ENSG00000102032.11ENST00000442361hsa-miR-6500-3p1539360011539360077mer-m8153936000153936020140-12.83
CAediting_1527094chrX_153936070_-ENSG00000102032.11ENST00000442361hsa-miR-6516-5p1539360701539360767mer-m8153936069153936088148-12.72
CAediting_1527095chrX_153936071_-ENSG00000102032.11ENST00000442361hsa-miR-6516-5p1539360701539360767mer-m8153936069153936088148-12.72
CAediting_1527090chrX_153936033_-ENSG00000102032.11ENST00000442361hsa-miR-6884-5p1539360281539360347mer-m8153936027153936047155-21.75
CAediting_1527090chrX_153936033_-ENSG00000102032.11ENST00000442361hsa-miR-7160-5p1539360311539360377mer-m8153936030153936048147-20.43
CAediting_1527090chrX_153936033_-ENSG00000102032.11ENST00000442361hsa-miR-7162-3p1539360321539360376mer153936031153936049141-19.59

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000102032.11ENST00000423624hsa-miR-624-3p1539401481539401547mer-m8153940147153940168146-19.07
CAediting_980496chr14_31014685_-ENSG00000102032.11ENST00000442361hsa-miR-624-3p1539401481539401547mer-m8153940147153940168146-19.07
CAediting_1368054chr19_46709310_-ENSG00000102032.11ENST00000423624hsa-miR-320e1539430021539430087mer-m8153943001153943018145-18.13
CAediting_77128chr1_85133844_+ENSG00000102032.11ENST00000423624hsa-miR-4423-3p1539429651539429717mer-m8153942964153942984145-18.56
CAediting_1229413chr17_67471544_+ENSG00000102032.11ENST00000423624hsa-miR-548aa1539416271539416337mer-m8153941626153941650140-14.84

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network
boxplot

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The effects of the RNA editing to the stability of the RNA structures for RENBP

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for RENBP

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
SKCMCAediting_1527089chrX_153936004_-0.03041884560272050.15388779914923....

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Relation with cancer stages for RENBP

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for RENBP

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for RENBP

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
RENBPP51606DB00141N-AcetylglucosamineN-acylglucosamine 2-epimerase SmallMoleculeDrugapproved|investigational|nutraceutical

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RelatedDiseases for RENBP

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
RENBPC0007193Cardiomyopathy, Dilated1CTD_human
RENBPC1449563Cardiomyopathy, Familial Idiopathic1CTD_human