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Editing gene: RAB5A (CAeditome ID:5868)

Gene summary for RAB5A

Gene summary

Gene information	Gene symbol	RAB5A
	Gene ID	5868
	Gene name	RAB5A, member RAS oncogene family
	Synonyms	RAB5
	Cytomap	3p24.3
	Type of gene	protein-coding
	Description	ras-related protein Rab-5ARAS-associated protein RAB5A
	Modification date	20210518
	UniProtAcc	P20339
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
RAB5A	GO:0003924	Ras-related protein Rab-5A	15378032
RAB5A	GO:0003924	Ras-related protein Rab-5A	17562788
RAB5A	GO:0003924	Ras-related protein Rab-5A	24891604
RAB5A	GO:0005525	Ras-related protein Rab-5A	15378032
RAB5A	GO:0019003	Ras-related protein Rab-5A	15378032
RAB5A	GO:0019003	Ras-related protein Rab-5A	23382462
RAB5A	GO:0006897	Ras-related protein Rab-5A	15378032
RAB5A	GO:0036465	Ras-related protein Rab-5A	16141272
RAB5A	GO:0051489	Ras-related protein Rab-5A	14978216
RAB5A	GO:0005654	Ras-related protein Rab-5A	0000052
RAB5A	GO:0005737	Ras-related protein Rab-5A	18034774
RAB5A	GO:0005737	Ras-related protein Rab-5A	21266579
RAB5A	GO:0005769	Ras-related protein Rab-5A	15078902
RAB5A	GO:0005769	Ras-related protein Rab-5A	15378032
RAB5A	GO:0005769	Ras-related protein Rab-5A	17562788
RAB5A	GO:0005769	Ras-related protein Rab-5A	18767904
RAB5A	GO:0005769	Ras-related protein Rab-5A	21645192
RAB5A	GO:0005769	Ras-related protein Rab-5A	24334765
RAB5A	GO:0005769	Ras-related protein Rab-5A	25869668
RAB5A	GO:0005829	Ras-related protein Rab-5A	23382462
RAB5A	GO:0010008	Ras-related protein Rab-5A	15016378
RAB5A	GO:0010008	Ras-related protein Rab-5A	22431521
RAB5A	GO:0036477	Ras-related protein Rab-5A	16141272
RAB5A	GO:0043195	Ras-related protein Rab-5A	16141272
RAB5A	GO:0043231	Ras-related protein Rab-5A	0000052

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RNA A-to-I events for RAB5A

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000144566.9

RNA A-to-I editing events in Cancer.

CAediting_262022(19951544, +), CAediting_262023(19951545, +), CAediting_262024(19951547, +), CAediting_262025(19951549, +), CAediting_262026(19951581, +), CAediting_262027(19951620, +), CAediting_262028(19951625, +), CAediting_262029(19951633, +), CAediting_262030(19951720, +), CAediting_262031(19951721, +), CAediting_262032(19951746, +), CAediting_262033(19951789, +), CAediting_262034(19951790, +), CAediting_262035(19951797, +), CAediting_262036(19952093, +), CAediting_262037(19952164, +), CAediting_262038(19953487, +), CAediting_262039(19953488, +), CAediting_262040(19953511, +), CAediting_262041(19953556, +), CAediting_262042(19953588, +), CAediting_262043(19953591, +), CAediting_262044(19953642, +), CAediting_262045(19953643, +), CAediting_262046(19954046, +), CAediting_262047(19954070, +), CAediting_262048(19954083, +), CAediting_262049(19954094, +), CAediting_262050(19954095, +), CAediting_262051(19954114, +), CAediting_262052(19954118, +), CAediting_262053(19954132, +), CAediting_262054(19954144, +), CAediting_262055(19954154, +), CAediting_262056(19954176, +), CAediting_262057(19954195, +), CAediting_262058(19954204, +), CAediting_262059(19954235, +), CAediting_262060(19954254, +), CAediting_262061(19954285, +), CAediting_262062(19954298, +), CAediting_262063(19954305, +), CAediting_262064(19954593, +), CAediting_262065(19954603, +), CAediting_262066(19954636, +), CAediting_262067(19954640, +), CAediting_262068(19954653, +), CAediting_262069(19954656, +), CAediting_262070(19954657, +), CAediting_262071(19954659, +), CAediting_262072(19954697, +), CAediting_262073(19954721, +), CAediting_262074(19954757, +), CAediting_262075(19954768, +), CAediting_262076(19955632, +), CAediting_262077(19955639, +), CAediting_262078(19955682, +), CAediting_262079(19955839, +), CAediting_262080(19956213, +), CAediting_262081(19956256, +), CAediting_262082(19956333, +), CAediting_262083(19956374, +), CAediting_262084(19956995, +), CAediting_262085(19956997, +), CAediting_262086(19957071, +), CAediting_262087(19957139, +), CAediting_262088(19957149, +), CAediting_262089(19957542, +), CAediting_262090(19957543, +), CAediting_262091(19957583, +), CAediting_262092(19957617, +), CAediting_262093(19957685, +), CAediting_262094(19958580, +), CAediting_262095(19958589, +), CAediting_262096(19958605, +), CAediting_262097(19958666, +), CAediting_262098(19958685, +), CAediting_262099(19958697, +), CAediting_262100(19958723, +), CAediting_262101(19959809, +), CAediting_262102(19959811, +), CAediting_262103(19959836, +), CAediting_262104(19959887, +), CAediting_262105(19959888, +), CAediting_262106(19959895, +), CAediting_262107(19960412, +), CAediting_262108(19960439, +), CAediting_262109(19960484, +), CAediting_262110(19960501, +), CAediting_262111(19960536, +), CAediting_262112(19960563, +), CAediting_262113(19962314, +), CAediting_262114(19962315, +), CAediting_262115(19962386, +), CAediting_262116(19962418, +), CAediting_262117(19962447, +), CAediting_262118(19962476, +), CAediting_262119(19962513, +), CAediting_262120(19962514, +), CAediting_262121(19962887, +), CAediting_262122(19962930, +), CAediting_262123(19962938, +), CAediting_262124(19962985, +), CAediting_262125(19963000, +), CAediting_262126(19963023, +), CAediting_262127(19963044, +), CAediting_262128(19963084, +), CAediting_262129(19963085, +), CAediting_262130(19963662, +), CAediting_262131(19963664, +), CAediting_262132(19963668, +), CAediting_262133(19963770, +), CAediting_262134(19963774, +), CAediting_262135(19963901, +), CAediting_262136(19964715, +), CAediting_262137(19964802, +), CAediting_262138(19965051, +), CAediting_262139(19965318, +), CAediting_262140(19965331, +), CAediting_262141(19965356, +), CAediting_262142(19965368, +), CAediting_262143(19965379, +), CAediting_262144(19966824, +), CAediting_262145(19966825, +), CAediting_262146(19966828, +), CAediting_262147(19966860, +), CAediting_262148(19966863, +), CAediting_262149(19966874, +), CAediting_262150(19966884, +), CAediting_262151(19966930, +), CAediting_262152(19967334, +), CAediting_262153(19967354, +), CAediting_262154(19968514, +), CAediting_262155(19968523, +), CAediting_262156(19968528, +), CAediting_262157(19968559, +), CAediting_262158(19968588, +), CAediting_262159(19968604, +), CAediting_262160(19970143, +), CAediting_262161(19970174, +), CAediting_262162(19970942, +), CAediting_262163(19970963, +), CAediting_262164(19970964, +), CAediting_262165(19970977, +), CAediting_262166(19970995, +), CAediting_262167(19971010, +), CAediting_262168(19971011, +), CAediting_262169(19971021, +), CAediting_262170(19971026, +), CAediting_262171(19971032, +), CAediting_262172(19971035, +), CAediting_262173(19971036, +), CAediting_262174(19971037, +), CAediting_262175(19971038, +), CAediting_262176(19971039, +), CAediting_262177(19971041, +), CAediting_262178(19971050, +), CAediting_262179(19971076, +), CAediting_262180(19971077, +), CAediting_262181(19971082, +), CAediting_262182(19971122, +), CAediting_262183(19971147, +), CAediting_262184(19971571, +), CAediting_262185(19971649, +), CAediting_262186(19971658, +), CAediting_262187(19971660, +), CAediting_262188(19971665, +), CAediting_262189(19971677, +), CAediting_262190(19971695, +), CAediting_262191(19971709, +), CAediting_262192(19974210, +), CAediting_262193(19974219, +), CAediting_262194(19974229, +), CAediting_262195(19974234, +), CAediting_262196(19974235, +), CAediting_262197(19974246, +), CAediting_262198(19974254, +), CAediting_262199(19974255, +), CAediting_262200(19974256, +), CAediting_262201(19974272, +), CAediting_262202(19974281, +), CAediting_262203(19974284, +), CAediting_262204(19974285, +), CAediting_262205(19974294, +), CAediting_262206(19974301, +), CAediting_262207(19974307, +), CAediting_262208(19974320, +), CAediting_262209(19974321, +), CAediting_262210(19974335, +), CAediting_262211(19974344, +), CAediting_262212(19974352, +), CAediting_262213(19974405, +), CAediting_262214(19974962, +), CAediting_262215(19974976, +), CAediting_262216(19974979, +), CAediting_262217(19974992, +), CAediting_262218(19975013, +), CAediting_262219(19975016, +), CAediting_262220(19975019, +), CAediting_262221(19975039, +), CAediting_262222(19975040, +), CAediting_262223(19975048, +), CAediting_262224(19975049, +), CAediting_262225(19975050, +), CAediting_262226(19975055, +), CAediting_262227(19975061, +), CAediting_262228(19975064, +), CAediting_262229(19975065, +), CAediting_262230(19975066, +), CAediting_262231(19975074, +), CAediting_262232(19975075, +), CAediting_262233(19975076, +), CAediting_262234(19975079, +), CAediting_262235(19975105, +), CAediting_262236(19975111, +), CAediting_262237(19975115, +), CAediting_262238(19975119, +), CAediting_262239(19975122, +), CAediting_262240(19975128, +), CAediting_262241(19975132, +), CAediting_262242(19975138, +), CAediting_262243(19975146, +), CAediting_262244(19975147, +), CAediting_262245(19975154, +), CAediting_262246(19975167, +), CAediting_262247(19975171, +), CAediting_262248(19975176, +), CAediting_262249(19975181, +), CAediting_262250(19975228, +), CAediting_262251(19976640, +), CAediting_262252(19976642, +), CAediting_262253(19979051, +), CAediting_262254(19979056, +), CAediting_262255(19979057, +), CAediting_262256(19979063, +), CAediting_262257(19979072, +), CAediting_262258(19979116, +), CAediting_262259(19979118, +), CAediting_262260(19979155, +), CAediting_262261(19979157, +), CAediting_262262(19979160, +), CAediting_262263(19979166, +), CAediting_262264(19979323, +), CAediting_262265(19979348, +), CAediting_262266(19979364, +), CAediting_262267(19979401, +), CAediting_262268(19979413, +), CAediting_262269(19979420, +), CAediting_262270(19979423, +), CAediting_262271(19979425, +), CAediting_262272(19979470, +), CAediting_262273(19979559, +),

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RNA editing positional annotations for RAB5A using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_262022	chr3_19951544_+	ncRNA_intronic
CAediting_262023	chr3_19951545_+	ncRNA_intronic
CAediting_262024	chr3_19951547_+	ncRNA_intronic
CAediting_262025	chr3_19951549_+	ncRNA_intronic
CAediting_262026	chr3_19951581_+	ncRNA_intronic
CAediting_262027	chr3_19951620_+	ncRNA_intronic
CAediting_262028	chr3_19951625_+	ncRNA_intronic
CAediting_262029	chr3_19951633_+	ncRNA_intronic
CAediting_262030	chr3_19951720_+	ncRNA_intronic
CAediting_262031	chr3_19951721_+	ncRNA_intronic
CAediting_262032	chr3_19951746_+	ncRNA_intronic
CAediting_262033	chr3_19951789_+	ncRNA_intronic
CAediting_262034	chr3_19951790_+	ncRNA_intronic
CAediting_262035	chr3_19951797_+	ncRNA_intronic
CAediting_262036	chr3_19952093_+	ncRNA_intronic
CAediting_262037	chr3_19952164_+	ncRNA_intronic
CAediting_262038	chr3_19953487_+	ncRNA_intronic
CAediting_262039	chr3_19953488_+	ncRNA_intronic
CAediting_262040	chr3_19953511_+	ncRNA_intronic
CAediting_262041	chr3_19953556_+	ncRNA_intronic
CAediting_262042	chr3_19953588_+	ncRNA_intronic
CAediting_262043	chr3_19953591_+	ncRNA_intronic
CAediting_262044	chr3_19953642_+	ncRNA_intronic
CAediting_262045	chr3_19953643_+	ncRNA_intronic
CAediting_262046	chr3_19954046_+	ncRNA_intronic
CAediting_262047	chr3_19954070_+	ncRNA_intronic
CAediting_262048	chr3_19954083_+	ncRNA_intronic
CAediting_262049	chr3_19954094_+	ncRNA_intronic
CAediting_262050	chr3_19954095_+	ncRNA_intronic
CAediting_262051	chr3_19954114_+	ncRNA_intronic
CAediting_262052	chr3_19954118_+	ncRNA_intronic
CAediting_262053	chr3_19954132_+	ncRNA_intronic
CAediting_262054	chr3_19954144_+	ncRNA_intronic
CAediting_262055	chr3_19954154_+	ncRNA_intronic
CAediting_262056	chr3_19954176_+	ncRNA_intronic
CAediting_262057	chr3_19954195_+	ncRNA_intronic
CAediting_262058	chr3_19954204_+	ncRNA_intronic
CAediting_262059	chr3_19954235_+	ncRNA_intronic
CAediting_262060	chr3_19954254_+	ncRNA_intronic
CAediting_262061	chr3_19954285_+	ncRNA_intronic
CAediting_262062	chr3_19954298_+	ncRNA_intronic
CAediting_262063	chr3_19954305_+	ncRNA_intronic
CAediting_262064	chr3_19954593_+	ncRNA_intronic
CAediting_262065	chr3_19954603_+	ncRNA_intronic
CAediting_262066	chr3_19954636_+	ncRNA_intronic
CAediting_262067	chr3_19954640_+	ncRNA_intronic
CAediting_262068	chr3_19954653_+	ncRNA_intronic
CAediting_262069	chr3_19954656_+	ncRNA_intronic
CAediting_262070	chr3_19954657_+	ncRNA_intronic
CAediting_262071	chr3_19954659_+	ncRNA_intronic
CAediting_262072	chr3_19954697_+	ncRNA_intronic
CAediting_262073	chr3_19954721_+	ncRNA_intronic
CAediting_262074	chr3_19954757_+	ncRNA_intronic
CAediting_262075	chr3_19954768_+	ncRNA_intronic
CAediting_262076	chr3_19955632_+	ncRNA_intronic
CAediting_262077	chr3_19955639_+	ncRNA_intronic
CAediting_262078	chr3_19955682_+	ncRNA_intronic
CAediting_262079	chr3_19955839_+	ncRNA_intronic
CAediting_262080	chr3_19956213_+	ncRNA_intronic
CAediting_262081	chr3_19956256_+	ncRNA_intronic
CAediting_262082	chr3_19956333_+	ncRNA_intronic
CAediting_262083	chr3_19956374_+	ncRNA_intronic
CAediting_262084	chr3_19956995_+	ncRNA_intronic
CAediting_262085	chr3_19956997_+	ncRNA_intronic
CAediting_262086	chr3_19957071_+	ncRNA_intronic
CAediting_262087	chr3_19957139_+	ncRNA_intronic
CAediting_262088	chr3_19957149_+	ncRNA_intronic
CAediting_262089	chr3_19957542_+	ncRNA_intronic
CAediting_262090	chr3_19957543_+	ncRNA_intronic
CAediting_262091	chr3_19957583_+	ncRNA_intronic
CAediting_262092	chr3_19957617_+	ncRNA_intronic
CAediting_262093	chr3_19957685_+	ncRNA_intronic
CAediting_262094	chr3_19958580_+	ncRNA_intronic
CAediting_262095	chr3_19958589_+	ncRNA_intronic
CAediting_262096	chr3_19958605_+	ncRNA_intronic
CAediting_262097	chr3_19958666_+	ncRNA_intronic
CAediting_262098	chr3_19958685_+	ncRNA_intronic
CAediting_262099	chr3_19958697_+	ncRNA_intronic
CAediting_262100	chr3_19958723_+	ncRNA_intronic
CAediting_262101	chr3_19959809_+	ncRNA_intronic
CAediting_262102	chr3_19959811_+	ncRNA_intronic
CAediting_262103	chr3_19959836_+	ncRNA_intronic
CAediting_262104	chr3_19959887_+	ncRNA_intronic
CAediting_262105	chr3_19959888_+	ncRNA_intronic
CAediting_262106	chr3_19959895_+	ncRNA_intronic
CAediting_262107	chr3_19960412_+	ncRNA_intronic
CAediting_262108	chr3_19960439_+	ncRNA_intronic
CAediting_262109	chr3_19960484_+	ncRNA_intronic
CAediting_262110	chr3_19960501_+	ncRNA_intronic
CAediting_262111	chr3_19960536_+	ncRNA_intronic
CAediting_262112	chr3_19960563_+	ncRNA_intronic
CAediting_262113	chr3_19962314_+	ncRNA_intronic
CAediting_262114	chr3_19962315_+	ncRNA_intronic
CAediting_262115	chr3_19962386_+	ncRNA_intronic
CAediting_262116	chr3_19962418_+	ncRNA_intronic
CAediting_262117	chr3_19962447_+	ncRNA_intronic
CAediting_262118	chr3_19962476_+	ncRNA_intronic
CAediting_262119	chr3_19962513_+	ncRNA_intronic
CAediting_262120	chr3_19962514_+	ncRNA_intronic
CAediting_262121	chr3_19962887_+	ncRNA_intronic
CAediting_262122	chr3_19962930_+	ncRNA_intronic
CAediting_262123	chr3_19962938_+	ncRNA_intronic
CAediting_262124	chr3_19962985_+	ncRNA_intronic
CAediting_262125	chr3_19963000_+	ncRNA_intronic
CAediting_262126	chr3_19963023_+	ncRNA_intronic
CAediting_262127	chr3_19963044_+	ncRNA_intronic
CAediting_262128	chr3_19963084_+	ncRNA_intronic
CAediting_262129	chr3_19963085_+	ncRNA_intronic
CAediting_262130	chr3_19963662_+	ncRNA_intronic
CAediting_262131	chr3_19963664_+	ncRNA_intronic
CAediting_262132	chr3_19963668_+	ncRNA_intronic
CAediting_262133	chr3_19963770_+	ncRNA_intronic
CAediting_262134	chr3_19963774_+	ncRNA_intronic
CAediting_262135	chr3_19963901_+	ncRNA_intronic
CAediting_262136	chr3_19964715_+	ncRNA_intronic
CAediting_262137	chr3_19964802_+	ncRNA_intronic
CAediting_262138	chr3_19965051_+	ncRNA_intronic
CAediting_262139	chr3_19965318_+	ncRNA_intronic
CAediting_262140	chr3_19965331_+	ncRNA_intronic
CAediting_262141	chr3_19965356_+	ncRNA_intronic
CAediting_262142	chr3_19965368_+	ncRNA_intronic
CAediting_262143	chr3_19965379_+	ncRNA_intronic
CAediting_262144	chr3_19966824_+	ncRNA_intronic
CAediting_262145	chr3_19966825_+	ncRNA_intronic
CAediting_262146	chr3_19966828_+	ncRNA_intronic
CAediting_262147	chr3_19966860_+	ncRNA_intronic
CAediting_262148	chr3_19966863_+	ncRNA_intronic
CAediting_262149	chr3_19966874_+	ncRNA_intronic
CAediting_262150	chr3_19966884_+	ncRNA_intronic
CAediting_262151	chr3_19966930_+	ncRNA_intronic
CAediting_262152	chr3_19967334_+	ncRNA_intronic
CAediting_262153	chr3_19967354_+	ncRNA_intronic
CAediting_262154	chr3_19968514_+	ncRNA_intronic
CAediting_262155	chr3_19968523_+	ncRNA_intronic
CAediting_262156	chr3_19968528_+	ncRNA_intronic
CAediting_262157	chr3_19968559_+	ncRNA_intronic
CAediting_262158	chr3_19968588_+	ncRNA_intronic
CAediting_262159	chr3_19968604_+	ncRNA_intronic
CAediting_262160	chr3_19970143_+	ncRNA_intronic
CAediting_262161	chr3_19970174_+	ncRNA_intronic
CAediting_262162	chr3_19970942_+	ncRNA_intronic
CAediting_262163	chr3_19970963_+	ncRNA_intronic
CAediting_262164	chr3_19970964_+	ncRNA_intronic
CAediting_262165	chr3_19970977_+	ncRNA_intronic
CAediting_262166	chr3_19970995_+	ncRNA_intronic
CAediting_262167	chr3_19971010_+	ncRNA_intronic
CAediting_262168	chr3_19971011_+	ncRNA_intronic
CAediting_262169	chr3_19971021_+	ncRNA_intronic
CAediting_262170	chr3_19971026_+	ncRNA_intronic
CAediting_262171	chr3_19971032_+	ncRNA_intronic
CAediting_262172	chr3_19971035_+	ncRNA_intronic
CAediting_262173	chr3_19971036_+	ncRNA_intronic
CAediting_262174	chr3_19971037_+	ncRNA_intronic
CAediting_262175	chr3_19971038_+	ncRNA_intronic
CAediting_262176	chr3_19971039_+	ncRNA_intronic
CAediting_262177	chr3_19971041_+	ncRNA_intronic
CAediting_262178	chr3_19971050_+	ncRNA_intronic
CAediting_262179	chr3_19971076_+	ncRNA_intronic
CAediting_262180	chr3_19971077_+	ncRNA_intronic
CAediting_262181	chr3_19971082_+	ncRNA_intronic
CAediting_262182	chr3_19971122_+	ncRNA_intronic
CAediting_262183	chr3_19971147_+	ncRNA_intronic
CAediting_262184	chr3_19971571_+	ncRNA_intronic
CAediting_262185	chr3_19971649_+	ncRNA_intronic
CAediting_262186	chr3_19971658_+	ncRNA_intronic
CAediting_262187	chr3_19971660_+	ncRNA_intronic
CAediting_262188	chr3_19971665_+	ncRNA_intronic
CAediting_262189	chr3_19971677_+	ncRNA_intronic
CAediting_262190	chr3_19971695_+	ncRNA_intronic
CAediting_262191	chr3_19971709_+	ncRNA_intronic
CAediting_262192	chr3_19974210_+	ncRNA_intronic
CAediting_262193	chr3_19974219_+	ncRNA_intronic
CAediting_262194	chr3_19974229_+	ncRNA_intronic
CAediting_262195	chr3_19974234_+	ncRNA_intronic
CAediting_262196	chr3_19974235_+	ncRNA_intronic
CAediting_262197	chr3_19974246_+	ncRNA_intronic
CAediting_262198	chr3_19974254_+	ncRNA_intronic
CAediting_262199	chr3_19974255_+	ncRNA_intronic
CAediting_262200	chr3_19974256_+	ncRNA_intronic
CAediting_262201	chr3_19974272_+	ncRNA_intronic
CAediting_262202	chr3_19974281_+	ncRNA_intronic
CAediting_262203	chr3_19974284_+	ncRNA_intronic
CAediting_262204	chr3_19974285_+	ncRNA_intronic
CAediting_262205	chr3_19974294_+	ncRNA_intronic
CAediting_262206	chr3_19974301_+	ncRNA_intronic
CAediting_262207	chr3_19974307_+	ncRNA_intronic
CAediting_262208	chr3_19974320_+	ncRNA_intronic
CAediting_262209	chr3_19974321_+	ncRNA_intronic
CAediting_262210	chr3_19974335_+	ncRNA_intronic
CAediting_262211	chr3_19974344_+	ncRNA_intronic
CAediting_262212	chr3_19974352_+	ncRNA_intronic
CAediting_262213	chr3_19974405_+	ncRNA_intronic
CAediting_262214	chr3_19974962_+	ncRNA_intronic
CAediting_262215	chr3_19974976_+	ncRNA_intronic
CAediting_262216	chr3_19974979_+	ncRNA_intronic
CAediting_262217	chr3_19974992_+	ncRNA_intronic
CAediting_262218	chr3_19975013_+	ncRNA_intronic
CAediting_262219	chr3_19975016_+	ncRNA_intronic
CAediting_262220	chr3_19975019_+	ncRNA_intronic
CAediting_262221	chr3_19975039_+	ncRNA_intronic
CAediting_262222	chr3_19975040_+	ncRNA_intronic
CAediting_262223	chr3_19975048_+	ncRNA_intronic
CAediting_262224	chr3_19975049_+	ncRNA_intronic
CAediting_262225	chr3_19975050_+	ncRNA_intronic
CAediting_262226	chr3_19975055_+	ncRNA_intronic
CAediting_262227	chr3_19975061_+	ncRNA_intronic
CAediting_262228	chr3_19975064_+	ncRNA_intronic
CAediting_262229	chr3_19975065_+	ncRNA_intronic
CAediting_262230	chr3_19975066_+	ncRNA_intronic
CAediting_262231	chr3_19975074_+	ncRNA_intronic
CAediting_262232	chr3_19975075_+	ncRNA_intronic
CAediting_262233	chr3_19975076_+	ncRNA_intronic
CAediting_262234	chr3_19975079_+	ncRNA_intronic
CAediting_262235	chr3_19975105_+	ncRNA_intronic
CAediting_262236	chr3_19975111_+	ncRNA_intronic
CAediting_262237	chr3_19975115_+	ncRNA_intronic
CAediting_262238	chr3_19975119_+	ncRNA_intronic
CAediting_262239	chr3_19975122_+	ncRNA_intronic
CAediting_262240	chr3_19975128_+	ncRNA_intronic
CAediting_262241	chr3_19975132_+	ncRNA_intronic
CAediting_262242	chr3_19975138_+	ncRNA_intronic
CAediting_262243	chr3_19975146_+	ncRNA_intronic
CAediting_262244	chr3_19975147_+	ncRNA_intronic
CAediting_262245	chr3_19975154_+	ncRNA_intronic
CAediting_262246	chr3_19975167_+	ncRNA_intronic
CAediting_262247	chr3_19975171_+	ncRNA_intronic
CAediting_262248	chr3_19975176_+	ncRNA_intronic
CAediting_262249	chr3_19975181_+	ncRNA_intronic
CAediting_262250	chr3_19975228_+	ncRNA_intronic
CAediting_262251	chr3_19976640_+	ncRNA_intronic
CAediting_262252	chr3_19976642_+	ncRNA_intronic
CAediting_262253	chr3_19979051_+	ncRNA_intronic
CAediting_262254	chr3_19979056_+	ncRNA_intronic
CAediting_262255	chr3_19979057_+	ncRNA_intronic
CAediting_262256	chr3_19979063_+	ncRNA_intronic
CAediting_262257	chr3_19979072_+	ncRNA_intronic
CAediting_262258	chr3_19979116_+	ncRNA_intronic
CAediting_262259	chr3_19979118_+	ncRNA_intronic
CAediting_262260	chr3_19979155_+	ncRNA_intronic
CAediting_262261	chr3_19979157_+	ncRNA_intronic
CAediting_262262	chr3_19979160_+	ncRNA_intronic
CAediting_262263	chr3_19979166_+	ncRNA_intronic
CAediting_262264	chr3_19979323_+	ncRNA_intronic
CAediting_262265	chr3_19979348_+	ncRNA_intronic
CAediting_262266	chr3_19979364_+	ncRNA_intronic
CAediting_262267	chr3_19979401_+	ncRNA_intronic
CAediting_262268	chr3_19979413_+	ncRNA_intronic
CAediting_262269	chr3_19979420_+	ncRNA_intronic
CAediting_262270	chr3_19979423_+	ncRNA_intronic
CAediting_262271	chr3_19979425_+	ncRNA_intronic
CAediting_262272	chr3_19979470_+	ncRNA_intronic
CAediting_262273	chr3_19979559_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_262022	chr3_19951544_+	SINE	Alu	AluJr
CAediting_262023	chr3_19951545_+	SINE	Alu	AluJr
CAediting_262024	chr3_19951547_+	SINE	Alu	AluJr
CAediting_262025	chr3_19951549_+	SINE	Alu	AluJr
CAediting_262026	chr3_19951581_+	SINE	Alu	AluJr
CAediting_262027	chr3_19951620_+	SINE	Alu	AluJr
CAediting_262028	chr3_19951625_+	SINE	Alu	AluJr
CAediting_262029	chr3_19951633_+	SINE	Alu	AluJr
CAediting_262030	chr3_19951720_+	SINE	Alu	AluJr
CAediting_262031	chr3_19951721_+	SINE	Alu	AluJr
CAediting_262032	chr3_19951746_+	SINE	Alu	AluJr
CAediting_262033	chr3_19951789_+	SINE	Alu	AluJr
CAediting_262034	chr3_19951790_+	SINE	Alu	AluJr
CAediting_262035	chr3_19951797_+	SINE	Alu	AluJr
CAediting_262036	chr3_19952093_+	SINE	Alu	FLAM_A
CAediting_262037	chr3_19952164_+	SINE	Alu	FLAM_A
CAediting_262038	chr3_19953487_+	SINE	Alu	AluSz6
CAediting_262039	chr3_19953488_+	SINE	Alu	AluSz6
CAediting_262040	chr3_19953511_+	SINE	Alu	AluSz6
CAediting_262041	chr3_19953556_+	SINE	Alu	AluSz6
CAediting_262042	chr3_19953588_+	SINE	Alu	AluSz6
CAediting_262043	chr3_19953591_+	SINE	Alu	AluSz6
CAediting_262044	chr3_19953642_+	SINE	Alu	AluSz6
CAediting_262045	chr3_19953643_+	SINE	Alu	AluSz6
CAediting_262046	chr3_19954046_+	SINE	Alu	AluSz
CAediting_262047	chr3_19954070_+	SINE	Alu	AluSz
CAediting_262048	chr3_19954083_+	SINE	Alu	AluSz
CAediting_262049	chr3_19954094_+	SINE	Alu	AluSz
CAediting_262050	chr3_19954095_+	SINE	Alu	AluSz
CAediting_262051	chr3_19954114_+	SINE	Alu	AluSz
CAediting_262052	chr3_19954118_+	SINE	Alu	AluSz
CAediting_262053	chr3_19954132_+	SINE	Alu	AluSz
CAediting_262054	chr3_19954144_+	SINE	Alu	AluSz
CAediting_262055	chr3_19954154_+	SINE	Alu	AluSz
CAediting_262056	chr3_19954176_+	SINE	Alu	AluSz
CAediting_262057	chr3_19954195_+	SINE	Alu	AluSz
CAediting_262058	chr3_19954204_+	SINE	Alu	AluSz
CAediting_262059	chr3_19954235_+	SINE	Alu	AluSz
CAediting_262060	chr3_19954254_+	SINE	Alu	AluSz
CAediting_262061	chr3_19954285_+	SINE	Alu	AluSz
CAediting_262062	chr3_19954298_+	SINE	Alu	AluSz
CAediting_262063	chr3_19954305_+	SINE	Alu	AluSz
CAediting_262064	chr3_19954593_+	SINE	Alu	AluSz6
CAediting_262065	chr3_19954603_+	SINE	Alu	AluSz6
CAediting_262066	chr3_19954636_+	SINE	Alu	AluSz6
CAediting_262067	chr3_19954640_+	SINE	Alu	AluSz6
CAediting_262068	chr3_19954653_+	SINE	Alu	AluSz6
CAediting_262069	chr3_19954656_+	SINE	Alu	AluSz6
CAediting_262070	chr3_19954657_+	SINE	Alu	AluSz6
CAediting_262071	chr3_19954659_+	SINE	Alu	AluSz6
CAediting_262072	chr3_19954697_+	SINE	Alu	AluSz6
CAediting_262073	chr3_19954721_+	SINE	Alu	AluSz6
CAediting_262074	chr3_19954757_+	SINE	Alu	AluSz6
CAediting_262075	chr3_19954768_+	SINE	Alu	AluSz6
CAediting_262076	chr3_19955632_+	SINE	Alu	AluSx4
CAediting_262077	chr3_19955639_+	SINE	Alu	AluSx4
CAediting_262078	chr3_19955682_+	SINE	Alu	AluSx4
CAediting_262079	chr3_19955839_+	SINE	Alu	AluSx4
CAediting_262080	chr3_19956213_+	SINE	Alu	AluSg
CAediting_262081	chr3_19956256_+	SINE	Alu	AluSg
CAediting_262082	chr3_19956333_+	SINE	Alu	AluSg
CAediting_262083	chr3_19956374_+	SINE	Alu	AluSg
CAediting_262084	chr3_19956995_+	SINE	Alu	AluJo
CAediting_262085	chr3_19956997_+	SINE	Alu	AluJo
CAediting_262086	chr3_19957071_+	SINE	Alu	AluJo
CAediting_262087	chr3_19957139_+	SINE	Alu	AluJo
CAediting_262088	chr3_19957149_+	SINE	Alu	AluJo
CAediting_262089	chr3_19957542_+	SINE	Alu	AluSz6
CAediting_262090	chr3_19957543_+	SINE	Alu	AluSz6
CAediting_262091	chr3_19957583_+	SINE	Alu	AluSz6
CAediting_262092	chr3_19957617_+	SINE	Alu	AluSz6
CAediting_262093	chr3_19957685_+	SINE	Alu	AluSz6
CAediting_262094	chr3_19958580_+	SINE	Alu	AluSz6
CAediting_262095	chr3_19958589_+	SINE	Alu	AluSz6
CAediting_262096	chr3_19958605_+	SINE	Alu	AluSz6
CAediting_262097	chr3_19958666_+	SINE	Alu	AluSz6
CAediting_262098	chr3_19958685_+	SINE	Alu	AluSz6
CAediting_262099	chr3_19958697_+	SINE	Alu	AluSz6
CAediting_262100	chr3_19958723_+	SINE	Alu	AluSz6
CAediting_262101	chr3_19959809_+	SINE	Alu	AluJr
CAediting_262102	chr3_19959811_+	SINE	Alu	AluJr
CAediting_262103	chr3_19959836_+	SINE	Alu	AluJr
CAediting_262104	chr3_19959887_+	SINE	Alu	AluJr
CAediting_262105	chr3_19959888_+	SINE	Alu	AluJr
CAediting_262106	chr3_19959895_+	SINE	Alu	AluJr
CAediting_262107	chr3_19960412_+	SINE	Alu	AluJo
CAediting_262108	chr3_19960439_+	SINE	Alu	AluJo
CAediting_262109	chr3_19960484_+	SINE	Alu	AluJo
CAediting_262110	chr3_19960501_+	SINE	Alu	AluJo
CAediting_262111	chr3_19960536_+	SINE	Alu	AluJo
CAediting_262112	chr3_19960563_+	SINE	Alu	AluJo
CAediting_262113	chr3_19962314_+	SINE	Alu	AluSg
CAediting_262114	chr3_19962315_+	SINE	Alu	AluSg
CAediting_262115	chr3_19962386_+	SINE	Alu	AluSg
CAediting_262116	chr3_19962418_+	SINE	Alu	AluSg
CAediting_262117	chr3_19962447_+	SINE	Alu	AluSg
CAediting_262118	chr3_19962476_+	SINE	Alu	AluSg
CAediting_262119	chr3_19962513_+	SINE	Alu	AluSg
CAediting_262120	chr3_19962514_+	SINE	Alu	AluSg
CAediting_262121	chr3_19962887_+	SINE	Alu	AluJr
CAediting_262122	chr3_19962930_+	SINE	Alu	AluJr
CAediting_262123	chr3_19962938_+	SINE	Alu	AluJr
CAediting_262124	chr3_19962985_+	SINE	Alu	AluJr
CAediting_262125	chr3_19963000_+	SINE	Alu	AluJr
CAediting_262126	chr3_19963023_+	SINE	Alu	AluJr
CAediting_262127	chr3_19963044_+	SINE	Alu	AluJr
CAediting_262128	chr3_19963084_+	SINE	Alu	AluJr
CAediting_262129	chr3_19963085_+	SINE	Alu	AluJr
CAediting_262130	chr3_19963662_+	SINE	Alu	AluJr
CAediting_262131	chr3_19963664_+	SINE	Alu	AluJr
CAediting_262132	chr3_19963668_+	SINE	Alu	AluJr
CAediting_262133	chr3_19963770_+	SINE	Alu	AluJr
CAediting_262134	chr3_19963774_+	SINE	Alu	AluJr
CAediting_262135	chr3_19963901_+	SINE	Alu	AluJr
CAediting_262136	chr3_19964715_+	SINE	Alu	AluSx
CAediting_262137	chr3_19964802_+	SINE	Alu	AluSx
CAediting_262138	chr3_19965051_+	SINE	Alu	AluSz
CAediting_262139	chr3_19965318_+	SINE	Alu	AluJr
CAediting_262140	chr3_19965331_+	SINE	Alu	AluJr
CAediting_262141	chr3_19965356_+	SINE	Alu	AluJr
CAediting_262142	chr3_19965368_+	SINE	Alu	AluJr
CAediting_262143	chr3_19965379_+	SINE	Alu	AluJr
CAediting_262144	chr3_19966824_+	SINE	Alu	AluJr
CAediting_262145	chr3_19966825_+	SINE	Alu	AluJr
CAediting_262146	chr3_19966828_+	SINE	Alu	AluJr
CAediting_262147	chr3_19966860_+	SINE	Alu	AluJr
CAediting_262148	chr3_19966863_+	SINE	Alu	AluJr
CAediting_262149	chr3_19966874_+	SINE	Alu	AluJr
CAediting_262150	chr3_19966884_+	SINE	Alu	AluJr
CAediting_262151	chr3_19966930_+	SINE	Alu	AluJr
CAediting_262152	chr3_19967334_+	SINE	Alu	AluSx1
CAediting_262153	chr3_19967354_+	SINE	Alu	AluSx1
CAediting_262154	chr3_19968514_+	SINE	Alu	AluSz6
CAediting_262155	chr3_19968523_+	SINE	Alu	AluSz6
CAediting_262156	chr3_19968528_+	SINE	Alu	AluSz6
CAediting_262157	chr3_19968559_+	SINE	Alu	AluSz6
CAediting_262158	chr3_19968588_+	SINE	Alu	AluSz6
CAediting_262159	chr3_19968604_+	SINE	Alu	AluSz6
CAediting_262160	chr3_19970143_+	SINE	Alu	AluSg7
CAediting_262161	chr3_19970174_+	SINE	Alu	AluSg7
CAediting_262162	chr3_19970942_+	SINE	Alu	AluSq2
CAediting_262163	chr3_19970963_+	SINE	Alu	AluSq2
CAediting_262164	chr3_19970964_+	SINE	Alu	AluSq2
CAediting_262165	chr3_19970977_+	SINE	Alu	AluSq2
CAediting_262166	chr3_19970995_+	SINE	Alu	AluSq2
CAediting_262167	chr3_19971010_+	SINE	Alu	AluSq2
CAediting_262168	chr3_19971011_+	SINE	Alu	AluSq2
CAediting_262169	chr3_19971021_+	SINE	Alu	AluSq2
CAediting_262170	chr3_19971026_+	SINE	Alu	AluSq2
CAediting_262171	chr3_19971032_+	SINE	Alu	AluSq2
CAediting_262172	chr3_19971035_+	SINE	Alu	AluSq2
CAediting_262173	chr3_19971036_+	SINE	Alu	AluSq2
CAediting_262174	chr3_19971037_+	SINE	Alu	AluSq2
CAediting_262175	chr3_19971038_+	SINE	Alu	AluSq2
CAediting_262176	chr3_19971039_+	SINE	Alu	AluSq2
CAediting_262177	chr3_19971041_+	SINE	Alu	AluSq2
CAediting_262178	chr3_19971050_+	SINE	Alu	AluSq2
CAediting_262179	chr3_19971076_+	SINE	Alu	AluSq2
CAediting_262180	chr3_19971077_+	SINE	Alu	AluSq2
CAediting_262181	chr3_19971082_+	SINE	Alu	AluSq2
CAediting_262182	chr3_19971122_+	SINE	Alu	AluSq2
CAediting_262183	chr3_19971147_+	SINE	Alu	AluSq2
CAediting_262184	chr3_19971571_+	SINE	Alu	AluSp
CAediting_262185	chr3_19971649_+	SINE	Alu	AluSp
CAediting_262186	chr3_19971658_+	SINE	Alu	AluSp
CAediting_262187	chr3_19971660_+	SINE	Alu	AluSp
CAediting_262188	chr3_19971665_+	SINE	Alu	AluSp
CAediting_262189	chr3_19971677_+	SINE	Alu	AluSp
CAediting_262190	chr3_19971695_+	SINE	Alu	AluSp
CAediting_262191	chr3_19971709_+	SINE	Alu	AluSp
CAediting_262192	chr3_19974210_+	SINE	Alu	AluSc
CAediting_262193	chr3_19974219_+	SINE	Alu	AluSc
CAediting_262194	chr3_19974229_+	SINE	Alu	AluSc
CAediting_262195	chr3_19974234_+	SINE	Alu	AluSc
CAediting_262196	chr3_19974235_+	SINE	Alu	AluSc
CAediting_262197	chr3_19974246_+	SINE	Alu	AluSc
CAediting_262198	chr3_19974254_+	SINE	Alu	AluSc
CAediting_262199	chr3_19974255_+	SINE	Alu	AluSc
CAediting_262200	chr3_19974256_+	SINE	Alu	AluSc
CAediting_262201	chr3_19974272_+	SINE	Alu	AluSc
CAediting_262202	chr3_19974281_+	SINE	Alu	AluSc
CAediting_262203	chr3_19974284_+	SINE	Alu	AluSc
CAediting_262204	chr3_19974285_+	SINE	Alu	AluSc
CAediting_262205	chr3_19974294_+	SINE	Alu	AluSc
CAediting_262206	chr3_19974301_+	SINE	Alu	AluSc
CAediting_262207	chr3_19974307_+	SINE	Alu	AluSc
CAediting_262208	chr3_19974320_+	SINE	Alu	AluSc
CAediting_262209	chr3_19974321_+	SINE	Alu	AluSc
CAediting_262210	chr3_19974335_+	SINE	Alu	AluSc
CAediting_262211	chr3_19974344_+	SINE	Alu	AluSc
CAediting_262212	chr3_19974352_+	SINE	Alu	AluSc
CAediting_262213	chr3_19974405_+	SINE	Alu	AluSc
CAediting_262214	chr3_19974962_+	SINE	Alu	AluSx
CAediting_262215	chr3_19974976_+	SINE	Alu	AluSx
CAediting_262216	chr3_19974979_+	SINE	Alu	AluSx
CAediting_262217	chr3_19974992_+	SINE	Alu	AluSx
CAediting_262218	chr3_19975013_+	SINE	Alu	AluSx
CAediting_262219	chr3_19975016_+	SINE	Alu	AluSx
CAediting_262220	chr3_19975019_+	SINE	Alu	AluSx
CAediting_262221	chr3_19975039_+	SINE	Alu	AluSx
CAediting_262222	chr3_19975040_+	SINE	Alu	AluSx
CAediting_262223	chr3_19975048_+	SINE	Alu	AluSx
CAediting_262224	chr3_19975049_+	SINE	Alu	AluSx
CAediting_262225	chr3_19975050_+	SINE	Alu	AluSx
CAediting_262226	chr3_19975055_+	SINE	Alu	AluSx
CAediting_262227	chr3_19975061_+	SINE	Alu	AluSx
CAediting_262228	chr3_19975064_+	SINE	Alu	AluSx
CAediting_262229	chr3_19975065_+	SINE	Alu	AluSx
CAediting_262230	chr3_19975066_+	SINE	Alu	AluSx
CAediting_262231	chr3_19975074_+	SINE	Alu	AluSx
CAediting_262232	chr3_19975075_+	SINE	Alu	AluSx
CAediting_262233	chr3_19975076_+	SINE	Alu	AluSx
CAediting_262234	chr3_19975079_+	SINE	Alu	AluSx
CAediting_262235	chr3_19975105_+	SINE	Alu	AluSx
CAediting_262236	chr3_19975111_+	SINE	Alu	AluSx
CAediting_262237	chr3_19975115_+	SINE	Alu	AluSx
CAediting_262238	chr3_19975119_+	SINE	Alu	AluSx
CAediting_262239	chr3_19975122_+	SINE	Alu	AluSx
CAediting_262240	chr3_19975128_+	SINE	Alu	AluSx
CAediting_262241	chr3_19975132_+	SINE	Alu	AluSx
CAediting_262242	chr3_19975138_+	SINE	Alu	AluSx
CAediting_262243	chr3_19975146_+	SINE	Alu	AluSx
CAediting_262244	chr3_19975147_+	SINE	Alu	AluSx
CAediting_262245	chr3_19975154_+	SINE	Alu	AluSx
CAediting_262246	chr3_19975167_+	SINE	Alu	AluSx
CAediting_262247	chr3_19975171_+	SINE	Alu	AluSx
CAediting_262248	chr3_19975176_+	SINE	Alu	AluSx
CAediting_262249	chr3_19975181_+	SINE	Alu	AluSx
CAediting_262250	chr3_19975228_+	SINE	Alu	AluSx
CAediting_262251	chr3_19976640_+	SINE	Alu	AluSp
CAediting_262252	chr3_19976642_+	SINE	Alu	AluSp
CAediting_262253	chr3_19979051_+	SINE	Alu	AluSg
CAediting_262254	chr3_19979056_+	SINE	Alu	AluSg
CAediting_262255	chr3_19979057_+	SINE	Alu	AluSg
CAediting_262256	chr3_19979063_+	SINE	Alu	AluSg
CAediting_262257	chr3_19979072_+	SINE	Alu	AluSg
CAediting_262258	chr3_19979116_+	SINE	Alu	AluSg
CAediting_262259	chr3_19979118_+	SINE	Alu	AluSg
CAediting_262260	chr3_19979155_+	SINE	Alu	AluSg
CAediting_262261	chr3_19979157_+	SINE	Alu	AluSg
CAediting_262262	chr3_19979160_+	SINE	Alu	AluSg
CAediting_262263	chr3_19979166_+	SINE	Alu	AluSg
CAediting_262264	chr3_19979323_+	SINE	Alu	AluYj4
CAediting_262265	chr3_19979348_+	SINE	Alu	AluYj4
CAediting_262266	chr3_19979364_+	SINE	Alu	AluYj4
CAediting_262267	chr3_19979401_+	SINE	Alu	AluYj4
CAediting_262268	chr3_19979413_+	SINE	Alu	AluYj4
CAediting_262269	chr3_19979420_+	SINE	Alu	AluYj4
CAediting_262270	chr3_19979423_+	SINE	Alu	AluYj4
CAediting_262271	chr3_19979425_+	SINE	Alu	AluYj4
CAediting_262272	chr3_19979470_+	SINE	Alu	AluYj4
CAediting_262273	chr3_19979559_+	SINE	Alu	AluYj4

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RNA A-to-I editing events in the alternative splicing sites for RAB5A

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_262206	chr3_19974301_+	19974295:19974303	5SS	0+4i	CAGGCAAGC	2.13	CAGGCAGGC	2.12
MEX_2	CAediting_262206	chr3_19974301_+	19974295:19974303	5SS	0+4i	CAGGCAAGC	2.13	CAGGCAGGC	2.12
ES	CAediting_262259	chr3_19979118_+	19979117:19979125	5SS	2+0i	CAGGTGCAC	4.29	CGGGTGCAC	-0.67
MEX_1	CAediting_262259	chr3_19979118_+	19979117:19979125	5SS	2+0i	CAGGTGCAC	4.29	CGGGTGCAC	-0.67
ES	CAediting_262272	chr3_19979470_+	19979448:19979470	3SS	3+0i	TAATTTTTTTTGTATTTTTAGTA	-6.18	TAATTTTTTTTGTATTTTTAGTG	-6.12
ES	CAediting_262272	chr3_19979470_+	19979451:19979473	3SS	0+1i	TTTTTTTTGTATTTTTAGTAGAG	-14.24	TTTTTTTTGTATTTTTAGTGGAG	-5.49
MEX_2	CAediting_262272	chr3_19979470_+	19979448:19979470	3SS	3+0i	TAATTTTTTTTGTATTTTTAGTA	-6.18	TAATTTTTTTTGTATTTTTAGTG	-6.12
MEX_2	CAediting_262272	chr3_19979470_+	19979451:19979473	3SS	0+1i	TTTTTTTTGTATTTTTAGTAGAG	-14.24	TTTTTTTTGTATTTTTAGTGGAG	-5.49
MEX_1	CAediting_262272	chr3_19979470_+	19979448:19979470	3SS	3+0i	TAATTTTTTTTGTATTTTTAGTA	-6.18	TAATTTTTTTTGTATTTTTAGTG	-6.12
MEX_1	CAediting_262272	chr3_19979470_+	19979451:19979473	3SS	0+1i	TTTTTTTTGTATTTTTAGTAGAG	-14.24	TTTTTTTTGTATTTTTAGTGGAG	-5.49

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000144566.9.RAB5A.

Correlation between RNA A-to-I editing and PSI for ENSG00000144566.9.RAB5A.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RAB5A

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for RAB5A

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for RAB5A

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1160181	chr17_7017644_-	ENSG00000144566.9	ENST00000446547	hsa-miR-195-3p	19976103	19976109	7mer-m8	19976087	19976110	158	-17.32
CAediting_117844	chr1_162342605_+	ENSG00000144566.9	ENST00000446547	hsa-miR-556-3p	19978395	19978401	7mer-m8	19978378	19978402	159	-13.32

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229415	chr17_67471547_+	ENSG00000144566.9	ENST00000273047	hsa-miR-548aa	19984411	19984417	7mer-m8	19984394	19984418	144	-6.98
CAediting_1229415	chr17_67471547_+	ENSG00000144566.9	ENST00000422242	hsa-miR-548aa	19984411	19984417	7mer-m8	19984394	19984418	144	-6.98

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for RAB5A

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for RAB5A

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_262036	chr3_19952093_+	3.69885520376904e-06	0.34075175519451	.	.	.	.
GBM	CAediting_262036	chr3_19952093_+	0.00778731395589722	0.35208715501014	.	.	.	.
STAD	CAediting_262036	chr3_19952093_+	0.00950508028399558	0.256897772398222	.	.	.	.
PCPG	CAediting_262036	chr3_19952093_+	0.0121151411023234	0.274231485756784	.	.	.	.
SKCM	CAediting_262036	chr3_19952093_+	0.0131792917502736	0.341651777192859	.	.	.	.

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Relation with cancer stages for RAB5A

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	clinical_stage	CAediting_262236	chr3_19975111_+	0.0251627017974777	-0.498831022969025
ESCA	pathologic_stage	CAediting_262226	chr3_19975055_+	0.0103411444447347	0.363093081553546
ESCA	pathologic_stage	CAediting_262237	chr3_19975115_+	0.0125029478330669	0.382170925929565
ESCA	pathologic_stage	CAediting_262238	chr3_19975119_+	0.029998748714009	0.33129193255266

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Relation with survival for RAB5A

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
ESCA	CAediting_262225	chr3_19975050_+	0.017388055455639	0.030818	14.3013

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RelatedDrugs for RAB5A

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for RAB5A

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
RAB5A	C0151744	Myocardial Ischemia	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene