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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: PRODH2 (CAeditome ID:58510) |
Gene summary for PRODH2 |
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Gene information | Gene symbol | PRODH2 | Gene ID | 58510 |
Gene name | proline dehydrogenase 2 | |
Synonyms | HSPOX1|HYPDH | |
Cytomap | 19q13.12 | |
Type of gene | protein-coding | |
Description | hydroxyproline dehydrogenasekidney and liver proline oxidase 1probable proline dehydrogenase 2probable proline oxidase 2proline dehydrogenase (oxidase) 2 | |
Modification date | 20210518 | |
UniProtAcc | Q9UF12 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
PRODH2 | GO:0016645 | Hydroxyproline dehydrogenase | 25697095 |
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RNA A-to-I events for PRODH2 |
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CAediting_1339045(35800326, -), CAediting_1339046(35800335, -), CAediting_1339047(35800345, -), CAediting_1339048(35800346, -), CAediting_1339049(35800381, -), CAediting_1339050(35800386, -), CAediting_1339051(35800413, -), CAediting_1339052(35800419, -), CAediting_1339053(35800422, -), CAediting_1339054(35800424, -), CAediting_1339055(35800427, -), CAediting_1339056(35800431, -), CAediting_1339057(35800498, -), CAediting_1339058(35800516, -), CAediting_1339059(35800521, -), CAediting_1339060(35800522, -), CAediting_1339061(35800540, -), CAediting_1339062(35800753, -), CAediting_1339063(35800790, -), CAediting_1339064(35800808, -), CAediting_1339065(35800817, -), CAediting_1339066(35800825, -), CAediting_1339067(35800857, -), CAediting_1339068(35800933, -), CAediting_1339069(35801023, -), CAediting_1339070(35801058, -), CAediting_1339071(35801084, -), CAediting_1339072(35801123, -), CAediting_1339073(35801141, -), CAediting_1339074(35801206, -), CAediting_1339075(35801208, -), CAediting_1339076(35801244, -), CAediting_1339077(35801249, -), CAediting_1339078(35801286, -), CAediting_1339079(35801300, -), CAediting_1339080(35801318, -), CAediting_1339081(35801322, -), CAediting_1339082(35801344, -), CAediting_1339083(35801354, -), CAediting_1339084(35801358, -), CAediting_1339085(35801383, -), CAediting_1339086(35802596, -), CAediting_1339087(35802654, -), CAediting_1339088(35802659, -), CAediting_1339089(35802664, -), CAediting_1339090(35802761, -), CAediting_1339091(35802820, -), CAediting_1339092(35802822, -), CAediting_1339093(35802839, -), CAediting_1339094(35802843, -), CAediting_1339095(35809210, -), CAediting_1339096(35809308, -), |
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RNA editing positional annotations for PRODH2 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_1339045 | chr19_35800326_- | ncRNA_intronic |
CAediting_1339046 | chr19_35800335_- | ncRNA_intronic |
CAediting_1339047 | chr19_35800345_- | ncRNA_intronic |
CAediting_1339048 | chr19_35800346_- | ncRNA_intronic |
CAediting_1339049 | chr19_35800381_- | ncRNA_intronic |
CAediting_1339050 | chr19_35800386_- | ncRNA_intronic |
CAediting_1339051 | chr19_35800413_- | ncRNA_intronic |
CAediting_1339052 | chr19_35800419_- | ncRNA_intronic |
CAediting_1339053 | chr19_35800422_- | ncRNA_intronic |
CAediting_1339054 | chr19_35800424_- | ncRNA_intronic |
CAediting_1339055 | chr19_35800427_- | ncRNA_intronic |
CAediting_1339056 | chr19_35800431_- | ncRNA_intronic |
CAediting_1339057 | chr19_35800498_- | ncRNA_intronic |
CAediting_1339058 | chr19_35800516_- | ncRNA_intronic |
CAediting_1339059 | chr19_35800521_- | ncRNA_intronic |
CAediting_1339060 | chr19_35800522_- | ncRNA_intronic |
CAediting_1339061 | chr19_35800540_- | ncRNA_intronic |
CAediting_1339062 | chr19_35800753_- | ncRNA_intronic |
CAediting_1339063 | chr19_35800790_- | ncRNA_intronic |
CAediting_1339064 | chr19_35800808_- | ncRNA_intronic |
CAediting_1339065 | chr19_35800817_- | ncRNA_intronic |
CAediting_1339066 | chr19_35800825_- | ncRNA_intronic |
CAediting_1339067 | chr19_35800857_- | ncRNA_intronic |
CAediting_1339068 | chr19_35800933_- | ncRNA_intronic |
CAediting_1339069 | chr19_35801023_- | ncRNA_intronic |
CAediting_1339070 | chr19_35801058_- | ncRNA_intronic |
CAediting_1339071 | chr19_35801084_- | ncRNA_intronic |
CAediting_1339072 | chr19_35801123_- | ncRNA_intronic |
CAediting_1339073 | chr19_35801141_- | ncRNA_intronic |
CAediting_1339074 | chr19_35801206_- | ncRNA_intronic |
CAediting_1339075 | chr19_35801208_- | ncRNA_intronic |
CAediting_1339076 | chr19_35801244_- | ncRNA_intronic |
CAediting_1339077 | chr19_35801249_- | ncRNA_intronic |
CAediting_1339078 | chr19_35801286_- | ncRNA_intronic |
CAediting_1339079 | chr19_35801300_- | ncRNA_intronic |
CAediting_1339080 | chr19_35801318_- | ncRNA_intronic |
CAediting_1339081 | chr19_35801322_- | ncRNA_intronic |
CAediting_1339082 | chr19_35801344_- | ncRNA_intronic |
CAediting_1339083 | chr19_35801354_- | ncRNA_intronic |
CAediting_1339084 | chr19_35801358_- | ncRNA_intronic |
CAediting_1339085 | chr19_35801383_- | ncRNA_intronic |
CAediting_1339086 | chr19_35802596_- | ncRNA_intronic |
CAediting_1339087 | chr19_35802654_- | ncRNA_intronic |
CAediting_1339088 | chr19_35802659_- | ncRNA_intronic |
CAediting_1339089 | chr19_35802664_- | ncRNA_intronic |
CAediting_1339090 | chr19_35802761_- | ncRNA_intronic |
CAediting_1339091 | chr19_35802820_- | ncRNA_intronic |
CAediting_1339092 | chr19_35802822_- | ncRNA_intronic |
CAediting_1339093 | chr19_35802839_- | ncRNA_intronic |
CAediting_1339094 | chr19_35802843_- | ncRNA_intronic |
CAediting_1339095 | chr19_35809210_- | ncRNA_intronic |
CAediting_1339096 | chr19_35809308_- | ncRNA_intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_1339045 | chr19_35800326_- | SINE | Alu | AluSz |
CAediting_1339046 | chr19_35800335_- | SINE | Alu | AluSz |
CAediting_1339047 | chr19_35800345_- | SINE | Alu | AluSz |
CAediting_1339048 | chr19_35800346_- | SINE | Alu | AluSz |
CAediting_1339049 | chr19_35800381_- | SINE | Alu | AluSz |
CAediting_1339050 | chr19_35800386_- | SINE | Alu | AluSz |
CAediting_1339051 | chr19_35800413_- | SINE | Alu | AluSz |
CAediting_1339052 | chr19_35800419_- | SINE | Alu | AluSz |
CAediting_1339053 | chr19_35800422_- | SINE | Alu | AluSz |
CAediting_1339054 | chr19_35800424_- | SINE | Alu | AluSz |
CAediting_1339055 | chr19_35800427_- | SINE | Alu | AluSz |
CAediting_1339056 | chr19_35800431_- | SINE | Alu | AluSz |
CAediting_1339057 | chr19_35800498_- | SINE | Alu | AluSz |
CAediting_1339058 | chr19_35800516_- | SINE | Alu | AluSz |
CAediting_1339059 | chr19_35800521_- | SINE | Alu | AluSz |
CAediting_1339060 | chr19_35800522_- | SINE | Alu | AluSz |
CAediting_1339061 | chr19_35800540_- | SINE | Alu | AluSz |
CAediting_1339062 | chr19_35800753_- | SINE | Alu | AluJb |
CAediting_1339063 | chr19_35800790_- | SINE | Alu | AluJb |
CAediting_1339064 | chr19_35800808_- | SINE | Alu | AluJb |
CAediting_1339065 | chr19_35800817_- | SINE | Alu | AluJb |
CAediting_1339066 | chr19_35800825_- | SINE | Alu | AluJb |
CAediting_1339067 | chr19_35800857_- | SINE | Alu | AluJb |
CAediting_1339068 | chr19_35800933_- | SINE | Alu | AluYj4 |
CAediting_1339069 | chr19_35801023_- | SINE | Alu | AluSx |
CAediting_1339070 | chr19_35801058_- | SINE | Alu | AluSx |
CAediting_1339071 | chr19_35801084_- | SINE | Alu | AluSx |
CAediting_1339072 | chr19_35801123_- | SINE | Alu | AluSx |
CAediting_1339073 | chr19_35801141_- | SINE | Alu | AluSx |
CAediting_1339074 | chr19_35801206_- | SINE | Alu | AluSx1 |
CAediting_1339075 | chr19_35801208_- | SINE | Alu | AluSx1 |
CAediting_1339076 | chr19_35801244_- | SINE | Alu | AluSx1 |
CAediting_1339077 | chr19_35801249_- | SINE | Alu | AluSx1 |
CAediting_1339078 | chr19_35801286_- | SINE | Alu | AluSx1 |
CAediting_1339079 | chr19_35801300_- | SINE | Alu | AluSx1 |
CAediting_1339080 | chr19_35801318_- | SINE | Alu | AluSx1 |
CAediting_1339081 | chr19_35801322_- | SINE | Alu | AluSx1 |
CAediting_1339082 | chr19_35801344_- | SINE | Alu | AluSx1 |
CAediting_1339083 | chr19_35801354_- | SINE | Alu | AluSx1 |
CAediting_1339084 | chr19_35801358_- | SINE | Alu | AluSx1 |
CAediting_1339085 | chr19_35801383_- | SINE | Alu | AluSx1 |
CAediting_1339086 | chr19_35802596_- | SINE | Alu | AluJr |
CAediting_1339087 | chr19_35802654_- | SINE | Alu | AluJr |
CAediting_1339088 | chr19_35802659_- | SINE | Alu | AluJr |
CAediting_1339089 | chr19_35802664_- | SINE | Alu | AluJr |
CAediting_1339090 | chr19_35802761_- | SINE | Alu | AluJr |
CAediting_1339091 | chr19_35802820_- | SINE | Alu | AluJr |
CAediting_1339092 | chr19_35802822_- | SINE | Alu | AluJr |
CAediting_1339093 | chr19_35802839_- | SINE | Alu | AluJr |
CAediting_1339094 | chr19_35802843_- | SINE | Alu | AluJr |
CAediting_1339095 | chr19_35809210_- | SINE | Alu | AluJr4 |
CAediting_1339096 | chr19_35809308_- | SINE | Alu | AluJr4 |
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RNA A-to-I editing events in the alternative splicing sites for PRODH2 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PRODH2 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for PRODH2 |
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The effects of the RNA editing to the miRNA binding sites for PRODH2 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for PRODH2 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for PRODH2 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for PRODH2 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for PRODH2 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for PRODH2 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PRODH2 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
PRODH2 | C0268531 | Hydroxyprolinemia | 2 | CLINGEN |
PRODH2 | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
PRODH2 | C0036341 | Schizophrenia | 1 | PSYGENET |