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Editing gene: PTBP2 (CAeditome ID:58155)

Gene summary for PTBP2

Gene summary

Gene information	Gene symbol	PTBP2
	Gene ID	58155
	Gene name	polypyrimidine tract binding protein 2
	Synonyms	PTBLP\|brPTB\|nPTB
	Cytomap	1p21.3
	Type of gene	protein-coding
	Description	polypyrimidine tract-binding protein 2PTB-like proteinneural polypyrimidine tract binding proteinneurally-enriched homolog of PTB
	Modification date	20210518
	UniProtAcc	Q9UKA9
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
PTBP2	GO:0033119	Polypyrimidine tract-binding protein 2	18335065

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RNA A-to-I events for PTBP2

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000117569.17

RNA A-to-I editing events in Cancer.

CAediting_82743(96725361, +), CAediting_82744(96725374, +), CAediting_82745(96725377, +), CAediting_82746(96725429, +), CAediting_82747(96725818, +), CAediting_82748(96725824, +), CAediting_82749(96725825, +), CAediting_82750(96725830, +), CAediting_82751(96725878, +), CAediting_82752(96725888, +), CAediting_82753(96725896, +), CAediting_82754(96725897, +), CAediting_82755(96725898, +), CAediting_82756(96725909, +), CAediting_82757(96725913, +), CAediting_82758(96725914, +), CAediting_82759(96725915, +), CAediting_82760(96725916, +), CAediting_82761(96725918, +), CAediting_82762(96725921, +), CAediting_82763(96725922, +), CAediting_82764(96725923, +), CAediting_82765(96725924, +), CAediting_82766(96725928, +), CAediting_82767(96725954, +), CAediting_82768(96725960, +), CAediting_82769(96725971, +), CAediting_82770(96725981, +), CAediting_82771(96725987, +), CAediting_82772(96725992, +), CAediting_82773(96725995, +), CAediting_82774(96725996, +), CAediting_82775(96726007, +), CAediting_82776(96726019, +), CAediting_82777(96726020, +), CAediting_82778(96726032, +), CAediting_82779(96726347, +), CAediting_82780(96726390, +), CAediting_82781(96726402, +), CAediting_82782(96726412, +), CAediting_82783(96726567, +), CAediting_82784(96726630, +), CAediting_82785(96726644, +), CAediting_82786(96726714, +), CAediting_82787(96726750, +), CAediting_82788(96726751, +), CAediting_82789(96726782, +), CAediting_82790(96726785, +), CAediting_82791(96726857, +), CAediting_82792(96726859, +), CAediting_82793(96728159, +), CAediting_82794(96733417, +), CAediting_82795(96733423, +), CAediting_82796(96733424, +), CAediting_82797(96733436, +), CAediting_82798(96733533, +), CAediting_82799(96733559, +), CAediting_82800(96736707, +), CAediting_82801(96736794, +), CAediting_82802(96741354, +), CAediting_82803(96741365, +), CAediting_82804(96741464, +), CAediting_82805(96743925, +), CAediting_82806(96743963, +), CAediting_82807(96744068, +), CAediting_82808(96744070, +), CAediting_82809(96745218, +), CAediting_82810(96745227, +), CAediting_82811(96745239, +), CAediting_82812(96745243, +), CAediting_82813(96745292, +), CAediting_82814(96745344, +), CAediting_82815(96745347, +), CAediting_82816(96745369, +), CAediting_82817(96745373, +), CAediting_82818(96745833, +), CAediting_82819(96745869, +), CAediting_82820(96745878, +), CAediting_82821(96745879, +), CAediting_82822(96745883, +), CAediting_82823(96745919, +), CAediting_82824(96745927, +), CAediting_82825(96745945, +), CAediting_82826(96745959, +), CAediting_82827(96746580, +), CAediting_82828(96746581, +), CAediting_82829(96746603, +), CAediting_82830(96773044, +), CAediting_82831(96773045, +), CAediting_82832(96792022, +), CAediting_82833(96792111, +), CAediting_82834(96793450, +), CAediting_82835(96793469, +), CAediting_82836(96793499, +), CAediting_82837(96793509, +), CAediting_82838(96793553, +), CAediting_82839(96793556, +), CAediting_82840(96793558, +), CAediting_82841(96793578, +), CAediting_82842(96793632, +), CAediting_82843(96793633, +), CAediting_82844(96796179, +), CAediting_82845(96796191, +), CAediting_82846(96796197, +), CAediting_82847(96796206, +), CAediting_82848(96796214, +), CAediting_82849(96796224, +), CAediting_82850(96796243, +), CAediting_82851(96796274, +), CAediting_82852(96796275, +), CAediting_82853(96797955, +), CAediting_82854(96797972, +), CAediting_82855(96797985, +), CAediting_82856(96797988, +), CAediting_82857(96797989, +), CAediting_82858(96797996, +), CAediting_82859(96797997, +), CAediting_82860(96798004, +), CAediting_82861(96798017, +), CAediting_82862(96798021, +), CAediting_82863(96798026, +), CAediting_82864(96798036, +), CAediting_82865(96798151, +), CAediting_82866(96798204, +), CAediting_82867(96798205, +), CAediting_82868(96798206, +), CAediting_82869(96798210, +), CAediting_82870(96798219, +), CAediting_82871(96798220, +), CAediting_82872(96798228, +), CAediting_82873(96798230, +), CAediting_82874(96798245, +), CAediting_82875(96798246, +), CAediting_82876(96798253, +), CAediting_82877(96798254, +), CAediting_82878(96798259, +), CAediting_82879(96798263, +), CAediting_82880(96798285, +), CAediting_82881(96798286, +), CAediting_82882(96798299, +), CAediting_82883(96798312, +), CAediting_82884(96798318, +), CAediting_82885(96798327, +), CAediting_82886(96798334, +), CAediting_82887(96798347, +), CAediting_82888(96798351, +), CAediting_82889(96798356, +), CAediting_82890(96798358, +), CAediting_82891(96798361, +), CAediting_82892(96798376, +), CAediting_82893(96798388, +), CAediting_82894(96798390, +), CAediting_82895(96799376, +), CAediting_82896(96799377, +), CAediting_82897(96799413, +), CAediting_82898(96799422, +), CAediting_82899(96799425, +), CAediting_82900(96799435, +), CAediting_82901(96799457, +), CAediting_82902(96799462, +), CAediting_82903(96799478, +), CAediting_82904(96799481, +), CAediting_82905(96799503, +), CAediting_82906(96800476, +), CAediting_82907(96800477, +), CAediting_82908(96800498, +), CAediting_82909(96800546, +), CAediting_82910(96800568, +), CAediting_82911(96800573, +), CAediting_82912(96800580, +), CAediting_82913(96800581, +), CAediting_82914(96800582, +), CAediting_82915(96800583, +), CAediting_82916(96800587, +), CAediting_82917(96800627, +), CAediting_82918(96800630, +), CAediting_82919(96800636, +), CAediting_82920(96800683, +), CAediting_82921(96800689, +), CAediting_82922(96801599, +), CAediting_82923(96801600, +), CAediting_82924(96801626, +), CAediting_82925(96801674, +), CAediting_82926(96801708, +), CAediting_82927(96801711, +), CAediting_82928(96801714, +), CAediting_82929(96801718, +), CAediting_82930(96801727, +), CAediting_82931(96801740, +), CAediting_82932(96801750, +), CAediting_82933(96801770, +), CAediting_82934(96801776, +), CAediting_82935(96801781, +), CAediting_82936(96801782, +), CAediting_82937(96801810, +), CAediting_82938(96801812, +), CAediting_82939(96801813, +), CAediting_82940(96801849, +), CAediting_82941(96801957, +), CAediting_82942(96801973, +), CAediting_82943(96801979, +), CAediting_82944(96802008, +), CAediting_82945(96802014, +), CAediting_82946(96802023, +), CAediting_82947(96802024, +), CAediting_82948(96802026, +), CAediting_82949(96802090, +), CAediting_82950(96802117, +), CAediting_82951(96802132, +), CAediting_82952(96802156, +), CAediting_82953(96802166, +), CAediting_82954(96802182, +),

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RNA editing positional annotations for PTBP2 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_82743	chr1_96725361_+	ncRNA_intronic
CAediting_82744	chr1_96725374_+	ncRNA_intronic
CAediting_82745	chr1_96725377_+	ncRNA_intronic
CAediting_82746	chr1_96725429_+	ncRNA_intronic
CAediting_82747	chr1_96725818_+	ncRNA_intronic
CAediting_82748	chr1_96725824_+	ncRNA_intronic
CAediting_82749	chr1_96725825_+	ncRNA_intronic
CAediting_82750	chr1_96725830_+	ncRNA_intronic
CAediting_82751	chr1_96725878_+	ncRNA_intronic
CAediting_82752	chr1_96725888_+	ncRNA_intronic
CAediting_82753	chr1_96725896_+	ncRNA_intronic
CAediting_82754	chr1_96725897_+	ncRNA_intronic
CAediting_82755	chr1_96725898_+	ncRNA_intronic
CAediting_82756	chr1_96725909_+	ncRNA_intronic
CAediting_82757	chr1_96725913_+	ncRNA_intronic
CAediting_82758	chr1_96725914_+	ncRNA_intronic
CAediting_82759	chr1_96725915_+	ncRNA_intronic
CAediting_82760	chr1_96725916_+	ncRNA_intronic
CAediting_82761	chr1_96725918_+	ncRNA_intronic
CAediting_82762	chr1_96725921_+	ncRNA_intronic
CAediting_82763	chr1_96725922_+	ncRNA_intronic
CAediting_82764	chr1_96725923_+	ncRNA_intronic
CAediting_82765	chr1_96725924_+	ncRNA_intronic
CAediting_82766	chr1_96725928_+	ncRNA_intronic
CAediting_82767	chr1_96725954_+	ncRNA_intronic
CAediting_82768	chr1_96725960_+	ncRNA_intronic
CAediting_82769	chr1_96725971_+	ncRNA_intronic
CAediting_82770	chr1_96725981_+	ncRNA_intronic
CAediting_82771	chr1_96725987_+	ncRNA_intronic
CAediting_82772	chr1_96725992_+	ncRNA_intronic
CAediting_82773	chr1_96725995_+	ncRNA_intronic
CAediting_82774	chr1_96725996_+	ncRNA_intronic
CAediting_82775	chr1_96726007_+	ncRNA_intronic
CAediting_82776	chr1_96726019_+	ncRNA_intronic
CAediting_82777	chr1_96726020_+	ncRNA_intronic
CAediting_82778	chr1_96726032_+	ncRNA_intronic
CAediting_82779	chr1_96726347_+	ncRNA_intronic
CAediting_82780	chr1_96726390_+	ncRNA_intronic
CAediting_82781	chr1_96726402_+	ncRNA_intronic
CAediting_82782	chr1_96726412_+	ncRNA_intronic
CAediting_82783	chr1_96726567_+	ncRNA_intronic
CAediting_82784	chr1_96726630_+	ncRNA_intronic
CAediting_82785	chr1_96726644_+	ncRNA_intronic
CAediting_82786	chr1_96726714_+	ncRNA_intronic
CAediting_82787	chr1_96726750_+	ncRNA_intronic
CAediting_82788	chr1_96726751_+	ncRNA_intronic
CAediting_82789	chr1_96726782_+	ncRNA_intronic
CAediting_82790	chr1_96726785_+	ncRNA_intronic
CAediting_82791	chr1_96726857_+	ncRNA_intronic
CAediting_82792	chr1_96726859_+	ncRNA_intronic
CAediting_82793	chr1_96728159_+	ncRNA_intronic
CAediting_82794	chr1_96733417_+	ncRNA_intronic
CAediting_82795	chr1_96733423_+	ncRNA_intronic
CAediting_82796	chr1_96733424_+	ncRNA_intronic
CAediting_82797	chr1_96733436_+	ncRNA_intronic
CAediting_82798	chr1_96733533_+	ncRNA_intronic
CAediting_82799	chr1_96733559_+	ncRNA_intronic
CAediting_82800	chr1_96736707_+	ncRNA_intronic
CAediting_82801	chr1_96736794_+	ncRNA_intronic
CAediting_82802	chr1_96741354_+	ncRNA_intronic
CAediting_82803	chr1_96741365_+	ncRNA_intronic
CAediting_82804	chr1_96741464_+	ncRNA_intronic
CAediting_82805	chr1_96743925_+	ncRNA_intronic
CAediting_82806	chr1_96743963_+	ncRNA_intronic
CAediting_82807	chr1_96744068_+	ncRNA_intronic
CAediting_82808	chr1_96744070_+	ncRNA_intronic
CAediting_82809	chr1_96745218_+	ncRNA_intronic
CAediting_82810	chr1_96745227_+	ncRNA_intronic
CAediting_82811	chr1_96745239_+	ncRNA_intronic
CAediting_82812	chr1_96745243_+	ncRNA_intronic
CAediting_82813	chr1_96745292_+	ncRNA_intronic
CAediting_82814	chr1_96745344_+	ncRNA_intronic
CAediting_82815	chr1_96745347_+	ncRNA_intronic
CAediting_82816	chr1_96745369_+	ncRNA_intronic
CAediting_82817	chr1_96745373_+	ncRNA_intronic
CAediting_82818	chr1_96745833_+	ncRNA_intronic
CAediting_82819	chr1_96745869_+	ncRNA_intronic
CAediting_82820	chr1_96745878_+	ncRNA_intronic
CAediting_82821	chr1_96745879_+	ncRNA_intronic
CAediting_82822	chr1_96745883_+	ncRNA_intronic
CAediting_82823	chr1_96745919_+	ncRNA_intronic
CAediting_82824	chr1_96745927_+	ncRNA_intronic
CAediting_82825	chr1_96745945_+	ncRNA_intronic
CAediting_82826	chr1_96745959_+	ncRNA_intronic
CAediting_82827	chr1_96746580_+	ncRNA_intronic
CAediting_82828	chr1_96746581_+	ncRNA_intronic
CAediting_82829	chr1_96746603_+	ncRNA_intronic
CAediting_82830	chr1_96773044_+	ncRNA_intronic
CAediting_82831	chr1_96773045_+	ncRNA_intronic
CAediting_82832	chr1_96792022_+	ncRNA_intronic
CAediting_82833	chr1_96792111_+	ncRNA_intronic
CAediting_82834	chr1_96793450_+	ncRNA_intronic
CAediting_82835	chr1_96793469_+	ncRNA_intronic
CAediting_82836	chr1_96793499_+	ncRNA_intronic
CAediting_82837	chr1_96793509_+	ncRNA_intronic
CAediting_82838	chr1_96793553_+	ncRNA_intronic
CAediting_82839	chr1_96793556_+	ncRNA_intronic
CAediting_82840	chr1_96793558_+	ncRNA_intronic
CAediting_82841	chr1_96793578_+	ncRNA_intronic
CAediting_82842	chr1_96793632_+	ncRNA_intronic
CAediting_82843	chr1_96793633_+	ncRNA_intronic
CAediting_82844	chr1_96796179_+	ncRNA_intronic
CAediting_82845	chr1_96796191_+	ncRNA_intronic
CAediting_82846	chr1_96796197_+	ncRNA_intronic
CAediting_82847	chr1_96796206_+	ncRNA_intronic
CAediting_82848	chr1_96796214_+	ncRNA_intronic
CAediting_82849	chr1_96796224_+	ncRNA_intronic
CAediting_82850	chr1_96796243_+	ncRNA_intronic
CAediting_82851	chr1_96796274_+	ncRNA_intronic
CAediting_82852	chr1_96796275_+	ncRNA_intronic
CAediting_82853	chr1_96797955_+	ncRNA_intronic
CAediting_82854	chr1_96797972_+	ncRNA_intronic
CAediting_82855	chr1_96797985_+	ncRNA_intronic
CAediting_82856	chr1_96797988_+	ncRNA_intronic
CAediting_82857	chr1_96797989_+	ncRNA_intronic
CAediting_82858	chr1_96797996_+	ncRNA_intronic
CAediting_82859	chr1_96797997_+	ncRNA_intronic
CAediting_82860	chr1_96798004_+	ncRNA_intronic
CAediting_82861	chr1_96798017_+	ncRNA_intronic
CAediting_82862	chr1_96798021_+	ncRNA_intronic
CAediting_82863	chr1_96798026_+	ncRNA_intronic
CAediting_82864	chr1_96798036_+	ncRNA_intronic
CAediting_82865	chr1_96798151_+	ncRNA_intronic
CAediting_82866	chr1_96798204_+	ncRNA_intronic
CAediting_82867	chr1_96798205_+	ncRNA_intronic
CAediting_82868	chr1_96798206_+	ncRNA_intronic
CAediting_82869	chr1_96798210_+	ncRNA_intronic
CAediting_82870	chr1_96798219_+	ncRNA_intronic
CAediting_82871	chr1_96798220_+	ncRNA_intronic
CAediting_82872	chr1_96798228_+	ncRNA_intronic
CAediting_82873	chr1_96798230_+	ncRNA_intronic
CAediting_82874	chr1_96798245_+	ncRNA_intronic
CAediting_82875	chr1_96798246_+	ncRNA_intronic
CAediting_82876	chr1_96798253_+	ncRNA_intronic
CAediting_82877	chr1_96798254_+	ncRNA_intronic
CAediting_82878	chr1_96798259_+	ncRNA_intronic
CAediting_82879	chr1_96798263_+	ncRNA_intronic
CAediting_82880	chr1_96798285_+	ncRNA_intronic
CAediting_82881	chr1_96798286_+	ncRNA_intronic
CAediting_82882	chr1_96798299_+	ncRNA_intronic
CAediting_82883	chr1_96798312_+	ncRNA_intronic
CAediting_82884	chr1_96798318_+	ncRNA_intronic
CAediting_82885	chr1_96798327_+	ncRNA_intronic
CAediting_82886	chr1_96798334_+	ncRNA_intronic
CAediting_82887	chr1_96798347_+	ncRNA_intronic
CAediting_82888	chr1_96798351_+	ncRNA_intronic
CAediting_82889	chr1_96798356_+	ncRNA_intronic
CAediting_82890	chr1_96798358_+	ncRNA_intronic
CAediting_82891	chr1_96798361_+	ncRNA_intronic
CAediting_82892	chr1_96798376_+	ncRNA_intronic
CAediting_82893	chr1_96798388_+	ncRNA_intronic
CAediting_82894	chr1_96798390_+	ncRNA_intronic
CAediting_82895	chr1_96799376_+	ncRNA_intronic
CAediting_82896	chr1_96799377_+	ncRNA_intronic
CAediting_82897	chr1_96799413_+	ncRNA_intronic
CAediting_82898	chr1_96799422_+	ncRNA_intronic
CAediting_82899	chr1_96799425_+	ncRNA_intronic
CAediting_82900	chr1_96799435_+	ncRNA_intronic
CAediting_82901	chr1_96799457_+	ncRNA_intronic
CAediting_82902	chr1_96799462_+	ncRNA_intronic
CAediting_82903	chr1_96799478_+	ncRNA_intronic
CAediting_82904	chr1_96799481_+	ncRNA_intronic
CAediting_82905	chr1_96799503_+	ncRNA_intronic
CAediting_82906	chr1_96800476_+	ncRNA_intronic
CAediting_82907	chr1_96800477_+	ncRNA_intronic
CAediting_82908	chr1_96800498_+	ncRNA_intronic
CAediting_82909	chr1_96800546_+	ncRNA_intronic
CAediting_82910	chr1_96800568_+	ncRNA_intronic
CAediting_82911	chr1_96800573_+	ncRNA_intronic
CAediting_82912	chr1_96800580_+	ncRNA_intronic
CAediting_82913	chr1_96800581_+	ncRNA_intronic
CAediting_82914	chr1_96800582_+	ncRNA_intronic
CAediting_82915	chr1_96800583_+	ncRNA_intronic
CAediting_82916	chr1_96800587_+	ncRNA_intronic
CAediting_82917	chr1_96800627_+	ncRNA_intronic
CAediting_82918	chr1_96800630_+	ncRNA_intronic
CAediting_82919	chr1_96800636_+	ncRNA_intronic
CAediting_82920	chr1_96800683_+	ncRNA_intronic
CAediting_82921	chr1_96800689_+	ncRNA_intronic
CAediting_82922	chr1_96801599_+	ncRNA_intronic
CAediting_82923	chr1_96801600_+	ncRNA_intronic
CAediting_82924	chr1_96801626_+	ncRNA_intronic
CAediting_82925	chr1_96801674_+	ncRNA_intronic
CAediting_82926	chr1_96801708_+	ncRNA_intronic
CAediting_82927	chr1_96801711_+	ncRNA_intronic
CAediting_82928	chr1_96801714_+	ncRNA_intronic
CAediting_82929	chr1_96801718_+	ncRNA_intronic
CAediting_82930	chr1_96801727_+	ncRNA_intronic
CAediting_82931	chr1_96801740_+	ncRNA_intronic
CAediting_82932	chr1_96801750_+	ncRNA_intronic
CAediting_82933	chr1_96801770_+	ncRNA_intronic
CAediting_82934	chr1_96801776_+	ncRNA_intronic
CAediting_82935	chr1_96801781_+	ncRNA_intronic
CAediting_82936	chr1_96801782_+	ncRNA_intronic
CAediting_82937	chr1_96801810_+	ncRNA_intronic
CAediting_82938	chr1_96801812_+	ncRNA_intronic
CAediting_82939	chr1_96801813_+	ncRNA_intronic
CAediting_82940	chr1_96801849_+	ncRNA_intronic
CAediting_82941	chr1_96801957_+	ncRNA_intronic
CAediting_82942	chr1_96801973_+	ncRNA_intronic
CAediting_82943	chr1_96801979_+	ncRNA_intronic
CAediting_82944	chr1_96802008_+	ncRNA_intronic
CAediting_82945	chr1_96802014_+	ncRNA_intronic
CAediting_82946	chr1_96802023_+	ncRNA_intronic
CAediting_82947	chr1_96802024_+	ncRNA_intronic
CAediting_82948	chr1_96802026_+	ncRNA_intronic
CAediting_82949	chr1_96802090_+	ncRNA_intronic
CAediting_82950	chr1_96802117_+	ncRNA_intronic
CAediting_82951	chr1_96802132_+	ncRNA_intronic
CAediting_82952	chr1_96802156_+	ncRNA_intronic
CAediting_82953	chr1_96802166_+	ncRNA_intronic
CAediting_82954	chr1_96802182_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_82743	chr1_96725361_+	SINE	Alu	AluY
CAediting_82744	chr1_96725374_+	SINE	Alu	AluY
CAediting_82745	chr1_96725377_+	SINE	Alu	AluY
CAediting_82746	chr1_96725429_+	SINE	Alu	AluY
CAediting_82747	chr1_96725818_+	SINE	Alu	AluY
CAediting_82748	chr1_96725824_+	SINE	Alu	AluY
CAediting_82749	chr1_96725825_+	SINE	Alu	AluY
CAediting_82750	chr1_96725830_+	SINE	Alu	AluY
CAediting_82751	chr1_96725878_+	SINE	Alu	AluY
CAediting_82752	chr1_96725888_+	SINE	Alu	AluY
CAediting_82753	chr1_96725896_+	SINE	Alu	AluY
CAediting_82754	chr1_96725897_+	SINE	Alu	AluY
CAediting_82755	chr1_96725898_+	SINE	Alu	AluY
CAediting_82756	chr1_96725909_+	SINE	Alu	AluY
CAediting_82757	chr1_96725913_+	SINE	Alu	AluY
CAediting_82758	chr1_96725914_+	SINE	Alu	AluY
CAediting_82759	chr1_96725915_+	SINE	Alu	AluY
CAediting_82760	chr1_96725916_+	SINE	Alu	AluY
CAediting_82761	chr1_96725918_+	SINE	Alu	AluY
CAediting_82762	chr1_96725921_+	SINE	Alu	AluY
CAediting_82763	chr1_96725922_+	SINE	Alu	AluY
CAediting_82764	chr1_96725923_+	SINE	Alu	AluY
CAediting_82765	chr1_96725924_+	SINE	Alu	AluY
CAediting_82766	chr1_96725928_+	SINE	Alu	AluY
CAediting_82767	chr1_96725954_+	SINE	Alu	AluY
CAediting_82768	chr1_96725960_+	SINE	Alu	AluY
CAediting_82769	chr1_96725971_+	SINE	Alu	AluY
CAediting_82770	chr1_96725981_+	SINE	Alu	AluY
CAediting_82771	chr1_96725987_+	SINE	Alu	AluY
CAediting_82772	chr1_96725992_+	SINE	Alu	AluY
CAediting_82773	chr1_96725995_+	SINE	Alu	AluY
CAediting_82774	chr1_96725996_+	SINE	Alu	AluY
CAediting_82775	chr1_96726007_+	SINE	Alu	AluY
CAediting_82776	chr1_96726019_+	SINE	Alu	AluY
CAediting_82777	chr1_96726020_+	SINE	Alu	AluY
CAediting_82778	chr1_96726032_+	SINE	Alu	AluY
CAediting_82779	chr1_96726347_+	SINE	Alu	AluSc
CAediting_82780	chr1_96726390_+	SINE	Alu	AluSc
CAediting_82781	chr1_96726402_+	SINE	Alu	AluSc
CAediting_82782	chr1_96726412_+	SINE	Alu	AluSc
CAediting_82783	chr1_96726567_+	SINE	Alu	AluY
CAediting_82784	chr1_96726630_+	SINE	Alu	AluY
CAediting_82785	chr1_96726644_+	SINE	Alu	AluY
CAediting_82786	chr1_96726714_+	SINE	Alu	AluY
CAediting_82787	chr1_96726750_+	SINE	Alu	AluSc
CAediting_82788	chr1_96726751_+	SINE	Alu	AluSc
CAediting_82789	chr1_96726782_+	SINE	Alu	AluSc
CAediting_82790	chr1_96726785_+	SINE	Alu	AluSc
CAediting_82791	chr1_96726857_+	SINE	Alu	AluSc
CAediting_82792	chr1_96726859_+	SINE	Alu	AluSc
CAediting_82793	chr1_96728159_+	SINE	Alu	AluJr4
CAediting_82794	chr1_96733417_+	SINE	Alu	AluJo
CAediting_82795	chr1_96733423_+	SINE	Alu	AluJo
CAediting_82796	chr1_96733424_+	SINE	Alu	AluJo
CAediting_82797	chr1_96733436_+	SINE	Alu	AluJo
CAediting_82798	chr1_96733533_+	SINE	Alu	AluJo
CAediting_82799	chr1_96733559_+	SINE	Alu	AluJo
CAediting_82800	chr1_96736707_+	SINE	Alu	AluJo
CAediting_82801	chr1_96736794_+	SINE	Alu	AluJo
CAediting_82802	chr1_96741354_+	SINE	Alu	AluJb
CAediting_82803	chr1_96741365_+	SINE	Alu	AluJb
CAediting_82804	chr1_96741464_+	SINE	Alu	AluJb
CAediting_82805	chr1_96743925_+	SINE	Alu	AluSx4
CAediting_82806	chr1_96743963_+	SINE	Alu	AluSx4
CAediting_82807	chr1_96744068_+	SINE	Alu	AluSx4
CAediting_82808	chr1_96744070_+	SINE	Alu	AluSx4
CAediting_82809	chr1_96745218_+	SINE	Alu	AluY
CAediting_82810	chr1_96745227_+	SINE	Alu	AluY
CAediting_82811	chr1_96745239_+	SINE	Alu	AluY
CAediting_82812	chr1_96745243_+	SINE	Alu	AluY
CAediting_82813	chr1_96745292_+	SINE	Alu	AluY
CAediting_82814	chr1_96745344_+	SINE	Alu	AluY
CAediting_82815	chr1_96745347_+	SINE	Alu	AluY
CAediting_82816	chr1_96745369_+	SINE	Alu	AluY
CAediting_82817	chr1_96745373_+	SINE	Alu	AluY
CAediting_82818	chr1_96745833_+	SINE	Alu	AluSg
CAediting_82819	chr1_96745869_+	SINE	Alu	AluSg
CAediting_82820	chr1_96745878_+	SINE	Alu	AluSg
CAediting_82821	chr1_96745879_+	SINE	Alu	AluSg
CAediting_82822	chr1_96745883_+	SINE	Alu	AluSg
CAediting_82823	chr1_96745919_+	SINE	Alu	AluSg
CAediting_82824	chr1_96745927_+	SINE	Alu	AluSg
CAediting_82825	chr1_96745945_+	SINE	Alu	AluSg
CAediting_82826	chr1_96745959_+	SINE	Alu	AluSg
CAediting_82827	chr1_96746580_+	SINE	Alu	AluJo
CAediting_82828	chr1_96746581_+	SINE	Alu	AluJo
CAediting_82829	chr1_96746603_+	SINE	Alu	AluJo
CAediting_82830	chr1_96773044_+	SINE	Alu	AluSx1
CAediting_82831	chr1_96773045_+	SINE	Alu	AluSx1
CAediting_82832	chr1_96792022_+	SINE	Alu	AluY
CAediting_82833	chr1_96792111_+	SINE	Alu	AluY
CAediting_82834	chr1_96793450_+	SINE	Alu	AluY
CAediting_82835	chr1_96793469_+	SINE	Alu	AluY
CAediting_82836	chr1_96793499_+	SINE	Alu	AluY
CAediting_82837	chr1_96793509_+	SINE	Alu	AluY
CAediting_82838	chr1_96793553_+	SINE	Alu	AluY
CAediting_82839	chr1_96793556_+	SINE	Alu	AluY
CAediting_82840	chr1_96793558_+	SINE	Alu	AluY
CAediting_82841	chr1_96793578_+	SINE	Alu	AluY
CAediting_82842	chr1_96793632_+	SINE	Alu	AluY
CAediting_82843	chr1_96793633_+	SINE	Alu	AluY
CAediting_82844	chr1_96796179_+	SINE	Alu	FLAM_C
CAediting_82845	chr1_96796191_+	SINE	Alu	FLAM_C
CAediting_82846	chr1_96796197_+	SINE	Alu	FLAM_C
CAediting_82847	chr1_96796206_+	SINE	Alu	FLAM_C
CAediting_82848	chr1_96796214_+	SINE	Alu	FLAM_C
CAediting_82849	chr1_96796224_+	SINE	Alu	FLAM_C
CAediting_82850	chr1_96796243_+	SINE	Alu	FLAM_C
CAediting_82851	chr1_96796274_+	SINE	Alu	FLAM_C
CAediting_82852	chr1_96796275_+	SINE	Alu	FLAM_C
CAediting_82853	chr1_96797955_+	SINE	Alu	AluYh3
CAediting_82854	chr1_96797972_+	SINE	Alu	AluYh3
CAediting_82855	chr1_96797985_+	SINE	Alu	AluYh3
CAediting_82856	chr1_96797988_+	SINE	Alu	AluYh3
CAediting_82857	chr1_96797989_+	SINE	Alu	AluYh3
CAediting_82858	chr1_96797996_+	SINE	Alu	AluYh3
CAediting_82859	chr1_96797997_+	SINE	Alu	AluYh3
CAediting_82860	chr1_96798004_+	SINE	Alu	AluYh3
CAediting_82861	chr1_96798017_+	SINE	Alu	AluYh3
CAediting_82862	chr1_96798021_+	SINE	Alu	AluYh3
CAediting_82863	chr1_96798026_+	SINE	Alu	AluYh3
CAediting_82864	chr1_96798036_+	SINE	Alu	AluYh3
CAediting_82865	chr1_96798151_+	SINE	Alu	AluSx1
CAediting_82866	chr1_96798204_+	SINE	Alu	AluSx1
CAediting_82867	chr1_96798205_+	SINE	Alu	AluSx1
CAediting_82868	chr1_96798206_+	SINE	Alu	AluSx1
CAediting_82869	chr1_96798210_+	SINE	Alu	AluSx1
CAediting_82870	chr1_96798219_+	SINE	Alu	AluSx1
CAediting_82871	chr1_96798220_+	SINE	Alu	AluSx1
CAediting_82872	chr1_96798228_+	SINE	Alu	AluSx1
CAediting_82873	chr1_96798230_+	SINE	Alu	AluSx1
CAediting_82874	chr1_96798245_+	SINE	Alu	AluSx1
CAediting_82875	chr1_96798246_+	SINE	Alu	AluSx1
CAediting_82876	chr1_96798253_+	SINE	Alu	AluSx1
CAediting_82877	chr1_96798254_+	SINE	Alu	AluSx1
CAediting_82878	chr1_96798259_+	SINE	Alu	AluSx1
CAediting_82879	chr1_96798263_+	SINE	Alu	AluSx1
CAediting_82880	chr1_96798285_+	SINE	Alu	AluSx1
CAediting_82881	chr1_96798286_+	SINE	Alu	AluSx1
CAediting_82882	chr1_96798299_+	SINE	Alu	AluSx1
CAediting_82883	chr1_96798312_+	SINE	Alu	AluSx1
CAediting_82884	chr1_96798318_+	SINE	Alu	AluSx1
CAediting_82885	chr1_96798327_+	SINE	Alu	AluSx1
CAediting_82886	chr1_96798334_+	SINE	Alu	AluSx1
CAediting_82887	chr1_96798347_+	SINE	Alu	AluSx1
CAediting_82888	chr1_96798351_+	SINE	Alu	AluSx1
CAediting_82889	chr1_96798356_+	SINE	Alu	AluSx1
CAediting_82890	chr1_96798358_+	SINE	Alu	AluSx1
CAediting_82891	chr1_96798361_+	SINE	Alu	AluSx1
CAediting_82892	chr1_96798376_+	SINE	Alu	AluSx1
CAediting_82893	chr1_96798388_+	SINE	Alu	AluSx1
CAediting_82894	chr1_96798390_+	SINE	Alu	AluSx1
CAediting_82895	chr1_96799376_+	SINE	Alu	AluY
CAediting_82896	chr1_96799377_+	SINE	Alu	AluY
CAediting_82897	chr1_96799413_+	SINE	Alu	AluY
CAediting_82898	chr1_96799422_+	SINE	Alu	AluY
CAediting_82899	chr1_96799425_+	SINE	Alu	AluY
CAediting_82900	chr1_96799435_+	SINE	Alu	AluY
CAediting_82901	chr1_96799457_+	SINE	Alu	AluY
CAediting_82902	chr1_96799462_+	SINE	Alu	AluY
CAediting_82903	chr1_96799478_+	SINE	Alu	AluY
CAediting_82904	chr1_96799481_+	SINE	Alu	AluY
CAediting_82905	chr1_96799503_+	SINE	Alu	AluY
CAediting_82906	chr1_96800476_+	SINE	Alu	AluJr
CAediting_82907	chr1_96800477_+	SINE	Alu	AluJr
CAediting_82908	chr1_96800498_+	SINE	Alu	AluJr
CAediting_82909	chr1_96800546_+	SINE	Alu	AluJr
CAediting_82910	chr1_96800568_+	SINE	Alu	AluJr
CAediting_82911	chr1_96800573_+	SINE	Alu	AluJr
CAediting_82912	chr1_96800580_+	SINE	Alu	AluJr
CAediting_82913	chr1_96800581_+	SINE	Alu	AluJr
CAediting_82914	chr1_96800582_+	SINE	Alu	AluJr
CAediting_82915	chr1_96800583_+	SINE	Alu	AluJr
CAediting_82916	chr1_96800587_+	SINE	Alu	AluJr
CAediting_82917	chr1_96800627_+	SINE	Alu	AluJr
CAediting_82918	chr1_96800630_+	SINE	Alu	AluJr
CAediting_82919	chr1_96800636_+	SINE	Alu	AluJr
CAediting_82920	chr1_96800683_+	SINE	Alu	AluJr
CAediting_82921	chr1_96800689_+	SINE	Alu	AluJr
CAediting_82922	chr1_96801599_+	SINE	Alu	AluSq2
CAediting_82923	chr1_96801600_+	SINE	Alu	AluSq2
CAediting_82924	chr1_96801626_+	SINE	Alu	AluSq2
CAediting_82925	chr1_96801674_+	SINE	Alu	AluSq2
CAediting_82926	chr1_96801708_+	SINE	Alu	AluSq2
CAediting_82927	chr1_96801711_+	SINE	Alu	AluSq2
CAediting_82928	chr1_96801714_+	SINE	Alu	AluSq2
CAediting_82929	chr1_96801718_+	SINE	Alu	AluSq2
CAediting_82930	chr1_96801727_+	SINE	Alu	AluSq2
CAediting_82931	chr1_96801740_+	SINE	Alu	AluSq2
CAediting_82932	chr1_96801750_+	SINE	Alu	AluSq2
CAediting_82933	chr1_96801770_+	SINE	Alu	AluSq2
CAediting_82934	chr1_96801776_+	SINE	Alu	AluSq2
CAediting_82935	chr1_96801781_+	SINE	Alu	AluSq2
CAediting_82936	chr1_96801782_+	SINE	Alu	AluSq2
CAediting_82937	chr1_96801810_+	SINE	Alu	AluSq2
CAediting_82938	chr1_96801812_+	SINE	Alu	AluSq2
CAediting_82939	chr1_96801813_+	SINE	Alu	AluSq2
CAediting_82940	chr1_96801849_+	SINE	Alu	AluSq2
CAediting_82941	chr1_96801957_+	SINE	Alu	AluY
CAediting_82942	chr1_96801973_+	SINE	Alu	AluY
CAediting_82943	chr1_96801979_+	SINE	Alu	AluY
CAediting_82944	chr1_96802008_+	SINE	Alu	AluY
CAediting_82945	chr1_96802014_+	SINE	Alu	AluY
CAediting_82946	chr1_96802023_+	SINE	Alu	AluY
CAediting_82947	chr1_96802024_+	SINE	Alu	AluY
CAediting_82948	chr1_96802026_+	SINE	Alu	AluY
CAediting_82949	chr1_96802090_+	SINE	Alu	AluY
CAediting_82950	chr1_96802117_+	SINE	Alu	AluY
CAediting_82951	chr1_96802132_+	SINE	Alu	AluY
CAediting_82952	chr1_96802156_+	SINE	Alu	AluY
CAediting_82953	chr1_96802166_+	SINE	Alu	AluY
CAediting_82954	chr1_96802182_+	SINE	Alu	AluY

Top

RNA A-to-I editing events in the alternative splicing sites for PTBP2

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000117569.17.PTBP2.

Correlation between RNA A-to-I editing and PSI for ENSG00000117569.17.PTBP2.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for PTBP2

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for PTBP2

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for PTBP2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000117569.17	ENST00000609116	hsa-miR-624-3p	96815119	96815125	7mer-m8	96815106	96815126	140	-12.34
CAediting_1306324	chr19_13836464_-	ENSG00000117569.17	ENST00000609116	hsa-miR-27a-3p	96814376	96814383	8mer-1a	96814362	96814383	144	-15.6
CAediting_393	chr1_1167164_+	ENSG00000117569.17	ENST00000609116	hsa-miR-200b-3p	96813927	96813933	7mer-m8	96813913	96813934	150	-11.39
CAediting_688081	chr9_63819627_+	ENSG00000117569.17	ENST00000609116	hsa-miR-4477b	96820250	96820256	7mer-m8	96820236	96820257	142	-10.44
CAediting_1306324	chr19_13836464_-	ENSG00000117569.17	ENST00000370197	hsa-miR-27a-3p	96814376	96814383	8mer-1a	96814362	96814383	144	-15.6
CAediting_393	chr1_1167164_+	ENSG00000117569.17	ENST00000370197	hsa-miR-200b-3p	96813927	96813933	7mer-m8	96813913	96813934	150	-11.39
CAediting_1306324	chr19_13836464_-	ENSG00000117569.17	ENST00000370198	hsa-miR-27a-3p	96814376	96814383	8mer-1a	96814362	96814383	144	-15.6
CAediting_393	chr1_1167164_+	ENSG00000117569.17	ENST00000370198	hsa-miR-200b-3p	96813927	96813933	7mer-m8	96813913	96813934	150	-11.39
CAediting_1229413	chr17_67471544_+	ENSG00000117569.17	ENST00000609116	hsa-miR-548aa	96821424	96821431	8mer-1a	96821409	96821431	156	-12.94
CAediting_1229415	chr17_67471547_+	ENSG00000117569.17	ENST00000609116	hsa-miR-548aa	96815009	96815016	8mer-1a	96814988	96815016	146	-9.61
CAediting_1229415	chr17_67471547_+	ENSG00000117569.17	ENST00000609116	hsa-miR-548aa	96818907	96818913	7mer-m8	96818888	96818914	142	-9.32
CAediting_1160181	chr17_7017644_-	ENSG00000117569.17	ENST00000609116	hsa-miR-195-3p	96813973	96813979	7mer-m8	96813959	96813980	147	-15.04
CAediting_1160181	chr17_7017644_-	ENSG00000117569.17	ENST00000609116	hsa-miR-195-3p	96819965	96819971	7mer-m8	96819954	96819972	146	-12.57
CAediting_1351755	chr19_40282625_-	ENSG00000117569.17	ENST00000609116	hsa-miR-641	96820267	96820274	8mer-1a	96820252	96820274	150	-13
CAediting_1368054	chr19_46709310_-	ENSG00000117569.17	ENST00000609116	hsa-miR-320e	96816143	96816149	7mer-m8	96816133	96816150	147	-18.29
CAediting_86358	chr1_109598906_+	ENSG00000117569.17	ENST00000609116	hsa-miR-197-5p	96818359	96818366	8mer-1a	96818343	96818366	160	-29.2
CAediting_117844	chr1_162342605_+	ENSG00000117569.17	ENST00000609116	hsa-miR-556-3p	96816782	96816789	8mer-1a	96816768	96816789	146	-8.76
CAediting_396018	chr5_1062918_-	ENSG00000117569.17	ENST00000609116	hsa-miR-4635	96823190	96823196	7mer-m8	96823177	96823197	162	-22.6
CAediting_580943	chr7_100356700_+	ENSG00000117569.17	ENST00000609116	hsa-miR-6840-3p	96823049	96823055	7mer-m8	96823038	96823056	144	-29.05
CAediting_524911	chr7_5495852_-	ENSG00000117569.17	ENST00000609116	hsa-miR-589-3p	96821658	96821664	7mer-m8	96821644	96821665	147	-13.75
CAediting_524911	chr7_5495852_-	ENSG00000117569.17	ENST00000609116	hsa-miR-589-3p	96822990	96822996	7mer-m8	96822975	96822997	148	-18.92
CAediting_1160181	chr17_7017644_-	ENSG00000117569.17	ENST00000370197	hsa-miR-195-3p	96813973	96813979	7mer-m8	96813959	96813980	147	-15.04
CAediting_1160181	chr17_7017644_-	ENSG00000117569.17	ENST00000370198	hsa-miR-195-3p	96813973	96813979	7mer-m8	96813959	96813980	147	-15.04
CAediting_468389	chr6_31355314_-	ENSG00000117569.17	ENST00000609116	hsa-miR-6891-5p	96814919	96814924	6mer	96814907	96814925	153	-26.04
CAediting_1524209	chrX_134546392_-	ENSG00000117569.17	ENST00000609116	hsa-miR-503-5p	96817256	96817261	6mer	96817241	96817262	142	-25.09

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_573001	chr7_92204086_-	ENSG00000117569.17	ENST00000609116	hsa-miR-1285-5p	96821216	96821223	8mer-1a	96821199	96821223	153	-18.82
CAediting_442554	chr5_154685830_+	ENSG00000117569.17	ENST00000609116	hsa-miR-1303	96818464	96818470	7mer-m8	96818449	96818471	149	-10.93
CAediting_1160181	chr17_7017644_-	ENSG00000117569.17	ENST00000609116	hsa-miR-195-3p	96817875	96817881	7mer-m8	96817860	96817882	153	-11.7
CAediting_393	chr1_1167164_+	ENSG00000117569.17	ENST00000609116	hsa-miR-200b-3p	96817751	96817756	6mer	96817732	96817757	142	-12.4
CAediting_1306324	chr19_13836464_-	ENSG00000117569.17	ENST00000609116	hsa-miR-27a-3p	96815038	96815044	7mer-1a	96815024	96815044	145	-14.31
CAediting_1368054	chr19_46709310_-	ENSG00000117569.17	ENST00000609116	hsa-miR-320e	96821999	96822006	8mer-1a	96821989	96822006	140	-11.46
CAediting_688080	chr9_63819626_+	ENSG00000117569.17	ENST00000609116	hsa-miR-4477b	96816577	96816583	7mer-m8	96816559	96816584	151	-11.25
CAediting_688081	chr9_63819627_+	ENSG00000117569.17	ENST00000609116	hsa-miR-4477b	96816577	96816583	7mer-m8	96816559	96816584	151	-11.25
CAediting_414656	chr5_72878640_+	ENSG00000117569.17	ENST00000609116	hsa-miR-4804-3p	96815486	96815493	8mer-1a	96815471	96815493	141	-10.22
CAediting_414656	chr5_72878640_+	ENSG00000117569.17	ENST00000609116	hsa-miR-4804-3p	96822372	96822379	8mer-1a	96822359	96822379	151	-12.77
CAediting_1524209	chrX_134546392_-	ENSG00000117569.17	ENST00000609116	hsa-miR-503-5p	96823360	96823365	6mer	96823347	96823369	148	-20.69
CAediting_1524209	chrX_134546392_-	ENSG00000117569.17	ENST00000609116	hsa-miR-503-5p	96823363	96823368	6mer	96823347	96823369	148	-20.69
CAediting_524911	chr7_5495852_-	ENSG00000117569.17	ENST00000609116	hsa-miR-589-3p	96815597	96815603	7mer-m8	96815581	96815604	151	-12.81
CAediting_524911	chr7_5495852_-	ENSG00000117569.17	ENST00000609116	hsa-miR-589-3p	96823368	96823374	7mer-m8	96823352	96823375	143	-14.61
CAediting_980496	chr14_31014685_-	ENSG00000117569.17	ENST00000609116	hsa-miR-624-3p	96819447	96819453	7mer-m8	96819434	96819454	140	-9.63
CAediting_1351755	chr19_40282625_-	ENSG00000117569.17	ENST00000609116	hsa-miR-641	96814182	96814188	7mer-m8	96814165	96814189	152	-8.8

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PTBP2

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for PTBP2

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for PTBP2

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for PTBP2

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for PTBP2

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for PTBP2

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene