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Editing gene: RAD1 (CAeditome ID:5810)

Gene summary for RAD1

Gene summary

Gene information	Gene symbol	RAD1
	Gene ID	5810
	Gene name	RAD1 checkpoint DNA exonuclease
	Synonyms	HRAD1\|REC1
	Cytomap	5p13.2
	Type of gene	protein-coding
	Description	cell cycle checkpoint protein RAD1DNA repair exonuclease REC1DNA repair exonuclease rad1 homologRAD1 checkpoint clamp componentRAD1 homologcell cycle checkpoint protein Hrad1checkpoint control protein HRAD1exonuclease homolog RAD1rad1-like DNA dam
	Modification date	20210518
	UniProtAcc	O60671
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
RAD1	GO:0008408	Cell cycle checkpoint protein RAD1	9660799
RAD1	GO:0071479	Cell cycle checkpoint protein RAD1	21659603
RAD1	GO:0005654	Cell cycle checkpoint protein RAD1	0000052
RAD1	GO:0005654	Cell cycle checkpoint protein RAD1	9716408
RAD1	GO:0005694	Cell cycle checkpoint protein RAD1	9716408
RAD1	GO:0043231	Cell cycle checkpoint protein RAD1	0000052

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RNA A-to-I events for RAD1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000113456.17

RNA A-to-I editing events in Cancer.

CAediting_401655(34905954, -), CAediting_401656(34905956, -), CAediting_401657(34905984, -), CAediting_401658(34905985, -), CAediting_401659(34905990, -), CAediting_401660(34906002, -), CAediting_401661(34906007, -), CAediting_401662(34906020, -), CAediting_401663(34906022, -), CAediting_401664(34906027, -), CAediting_401665(34906031, -), CAediting_401666(34906044, -), CAediting_401667(34906050, -), CAediting_401668(34906051, -), CAediting_401669(34906052, -), CAediting_401670(34906057, -), CAediting_401671(34906060, -), CAediting_401672(34906063, -), CAediting_401673(34906066, -), CAediting_401674(34906076, -), CAediting_401675(34906078, -), CAediting_401676(34906087, -), CAediting_401677(34906092, -), CAediting_401678(34906093, -), CAediting_401679(34906119, -), CAediting_401680(34906122, -), CAediting_401681(34906123, -), CAediting_401682(34906124, -), CAediting_401683(34906125, -), CAediting_401684(34906126, -), CAediting_401685(34906128, -), CAediting_401686(34906130, -), CAediting_401687(34906131, -), CAediting_401688(34906132, -), CAediting_401689(34906133, -), CAediting_401690(34906137, -), CAediting_401691(34906149, -), CAediting_401692(34906150, -), CAediting_401693(34906151, -), CAediting_401694(34906159, -), CAediting_401695(34906169, -), CAediting_401696(34906172, -), CAediting_401697(34906180, -), CAediting_401698(34906184, -), CAediting_401699(34906189, -), CAediting_401700(34906203, -), CAediting_401701(34906207, -), CAediting_401702(34906212, -), CAediting_401703(34906221, -), CAediting_401704(34906224, -), CAediting_401705(34906229, -), CAediting_401706(34906230, -), CAediting_401707(34906236, -), CAediting_401708(34906238, -), CAediting_401709(34906257, -), CAediting_401710(34906373, -), CAediting_401711(34906380, -), CAediting_401712(34906382, -), CAediting_401713(34906394, -), CAediting_401714(34906395, -), CAediting_401715(34906396, -), CAediting_401716(34906413, -), CAediting_401717(34906418, -), CAediting_401718(34906421, -), CAediting_401719(34906422, -), CAediting_401720(34906427, -), CAediting_401721(34906434, -), CAediting_401722(34906441, -), CAediting_401723(34906442, -), CAediting_401724(34906447, -), CAediting_401725(34906459, -), CAediting_401726(34906469, -), CAediting_401727(34906473, -), CAediting_401728(34906482, -), CAediting_401729(34906490, -), CAediting_401730(34906501, -), CAediting_401731(34906515, -), CAediting_401732(34906517, -), CAediting_401733(34906523, -), CAediting_401734(34906527, -), CAediting_401735(34906531, -), CAediting_401736(34906553, -), CAediting_401737(34906556, -), CAediting_401738(34906557, -), CAediting_401739(34906563, -), CAediting_401740(34906571, -), CAediting_401741(34906577, -), CAediting_401742(34906587, -), CAediting_401743(34906589, -), CAediting_401744(34906595, -), CAediting_401745(34906603, -), CAediting_401746(34906630, -), CAediting_401747(34906632, -), CAediting_401748(34906633, -), CAediting_401749(34906635, -), CAediting_401750(34906637, -), CAediting_401751(34906645, -), CAediting_401752(34906651, -), CAediting_401753(34908101, -), CAediting_401754(34908201, -), CAediting_401755(34908208, -), CAediting_401756(34908216, -), CAediting_401757(34908226, -), CAediting_401758(34908236, -), CAediting_401759(34908239, -), CAediting_401760(34908241, -), CAediting_401761(34908246, -), CAediting_401762(34908270, -), CAediting_401763(34908271, -), CAediting_401764(34908279, -), CAediting_401765(34908280, -), CAediting_401766(34908285, -), CAediting_401767(34908289, -), CAediting_401768(34908302, -), CAediting_401769(34908306, -), CAediting_401770(34908311, -), CAediting_401771(34908312, -), CAediting_401772(34908338, -), CAediting_401773(34908342, -), CAediting_401774(34908345, -), CAediting_401775(34908348, -), CAediting_401776(34908352, -), CAediting_401777(34908353, -), CAediting_401778(34908357, -), CAediting_401779(34908368, -), CAediting_401780(34908372, -), CAediting_401781(34908378, -), CAediting_401782(34908379, -), CAediting_401783(34908388, -), CAediting_401784(34908412, -), CAediting_401785(34908425, -), CAediting_401786(34908439, -), CAediting_401787(34908442, -), CAediting_401788(34908448, -), CAediting_401789(34912765, -),

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RNA editing positional annotations for RAD1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_401655	chr5_34905954_-	UTR3
CAediting_401656	chr5_34905956_-	UTR3
CAediting_401657	chr5_34905984_-	UTR3
CAediting_401658	chr5_34905985_-	UTR3
CAediting_401659	chr5_34905990_-	UTR3
CAediting_401660	chr5_34906002_-	UTR3
CAediting_401661	chr5_34906007_-	UTR3
CAediting_401662	chr5_34906020_-	UTR3
CAediting_401663	chr5_34906022_-	UTR3
CAediting_401664	chr5_34906027_-	UTR3
CAediting_401665	chr5_34906031_-	UTR3
CAediting_401666	chr5_34906044_-	UTR3
CAediting_401667	chr5_34906050_-	UTR3
CAediting_401668	chr5_34906051_-	UTR3
CAediting_401669	chr5_34906052_-	UTR3
CAediting_401670	chr5_34906057_-	UTR3
CAediting_401671	chr5_34906060_-	UTR3
CAediting_401672	chr5_34906063_-	UTR3
CAediting_401673	chr5_34906066_-	UTR3
CAediting_401674	chr5_34906076_-	UTR3
CAediting_401675	chr5_34906078_-	UTR3
CAediting_401676	chr5_34906087_-	UTR3
CAediting_401677	chr5_34906092_-	UTR3
CAediting_401678	chr5_34906093_-	UTR3
CAediting_401679	chr5_34906119_-	UTR3
CAediting_401680	chr5_34906122_-	UTR3
CAediting_401681	chr5_34906123_-	UTR3
CAediting_401682	chr5_34906124_-	UTR3
CAediting_401683	chr5_34906125_-	UTR3
CAediting_401684	chr5_34906126_-	UTR3
CAediting_401685	chr5_34906128_-	UTR3
CAediting_401686	chr5_34906130_-	UTR3
CAediting_401687	chr5_34906131_-	UTR3
CAediting_401688	chr5_34906132_-	UTR3
CAediting_401689	chr5_34906133_-	UTR3
CAediting_401690	chr5_34906137_-	UTR3
CAediting_401691	chr5_34906149_-	UTR3
CAediting_401692	chr5_34906150_-	UTR3
CAediting_401693	chr5_34906151_-	UTR3
CAediting_401694	chr5_34906159_-	UTR3
CAediting_401695	chr5_34906169_-	UTR3
CAediting_401696	chr5_34906172_-	UTR3
CAediting_401697	chr5_34906180_-	UTR3
CAediting_401698	chr5_34906184_-	UTR3
CAediting_401699	chr5_34906189_-	UTR3
CAediting_401700	chr5_34906203_-	UTR3
CAediting_401701	chr5_34906207_-	UTR3
CAediting_401702	chr5_34906212_-	UTR3
CAediting_401703	chr5_34906221_-	UTR3
CAediting_401704	chr5_34906224_-	UTR3
CAediting_401705	chr5_34906229_-	UTR3
CAediting_401706	chr5_34906230_-	UTR3
CAediting_401707	chr5_34906236_-	UTR3
CAediting_401708	chr5_34906238_-	UTR3
CAediting_401709	chr5_34906257_-	UTR3
CAediting_401710	chr5_34906373_-	UTR3
CAediting_401711	chr5_34906380_-	UTR3
CAediting_401712	chr5_34906382_-	UTR3
CAediting_401713	chr5_34906394_-	UTR3
CAediting_401714	chr5_34906395_-	UTR3
CAediting_401715	chr5_34906396_-	UTR3
CAediting_401716	chr5_34906413_-	UTR3
CAediting_401717	chr5_34906418_-	UTR3
CAediting_401718	chr5_34906421_-	UTR3
CAediting_401719	chr5_34906422_-	UTR3
CAediting_401720	chr5_34906427_-	UTR3
CAediting_401721	chr5_34906434_-	UTR3
CAediting_401722	chr5_34906441_-	UTR3
CAediting_401723	chr5_34906442_-	UTR3
CAediting_401724	chr5_34906447_-	UTR3
CAediting_401725	chr5_34906459_-	UTR3
CAediting_401726	chr5_34906469_-	UTR3
CAediting_401727	chr5_34906473_-	UTR3
CAediting_401728	chr5_34906482_-	UTR3
CAediting_401729	chr5_34906490_-	UTR3
CAediting_401730	chr5_34906501_-	UTR3
CAediting_401731	chr5_34906515_-	UTR3
CAediting_401732	chr5_34906517_-	UTR3
CAediting_401733	chr5_34906523_-	UTR3
CAediting_401734	chr5_34906527_-	UTR3
CAediting_401735	chr5_34906531_-	UTR3
CAediting_401736	chr5_34906553_-	UTR3
CAediting_401737	chr5_34906556_-	UTR3
CAediting_401738	chr5_34906557_-	UTR3
CAediting_401739	chr5_34906563_-	UTR3
CAediting_401740	chr5_34906571_-	UTR3
CAediting_401741	chr5_34906577_-	UTR3
CAediting_401742	chr5_34906587_-	UTR3
CAediting_401743	chr5_34906589_-	UTR3
CAediting_401744	chr5_34906595_-	UTR3
CAediting_401745	chr5_34906603_-	UTR3
CAediting_401746	chr5_34906630_-	UTR3
CAediting_401747	chr5_34906632_-	UTR3
CAediting_401748	chr5_34906633_-	UTR3
CAediting_401749	chr5_34906635_-	UTR3
CAediting_401750	chr5_34906637_-	UTR3
CAediting_401751	chr5_34906645_-	UTR3
CAediting_401752	chr5_34906651_-	UTR3
CAediting_401753	chr5_34908101_-	UTR3
CAediting_401754	chr5_34908201_-	UTR3
CAediting_401755	chr5_34908208_-	UTR3
CAediting_401756	chr5_34908216_-	UTR3
CAediting_401757	chr5_34908226_-	UTR3
CAediting_401758	chr5_34908236_-	UTR3
CAediting_401759	chr5_34908239_-	UTR3
CAediting_401760	chr5_34908241_-	UTR3
CAediting_401761	chr5_34908246_-	UTR3
CAediting_401762	chr5_34908270_-	UTR3
CAediting_401763	chr5_34908271_-	UTR3
CAediting_401764	chr5_34908279_-	UTR3
CAediting_401765	chr5_34908280_-	UTR3
CAediting_401766	chr5_34908285_-	UTR3
CAediting_401767	chr5_34908289_-	UTR3
CAediting_401768	chr5_34908302_-	UTR3
CAediting_401769	chr5_34908306_-	UTR3
CAediting_401770	chr5_34908311_-	UTR3
CAediting_401771	chr5_34908312_-	UTR3
CAediting_401772	chr5_34908338_-	UTR3
CAediting_401773	chr5_34908342_-	UTR3
CAediting_401774	chr5_34908345_-	UTR3
CAediting_401775	chr5_34908348_-	UTR3
CAediting_401776	chr5_34908352_-	UTR3
CAediting_401777	chr5_34908353_-	UTR3
CAediting_401778	chr5_34908357_-	UTR3
CAediting_401779	chr5_34908368_-	UTR3
CAediting_401780	chr5_34908372_-	UTR3
CAediting_401781	chr5_34908378_-	UTR3
CAediting_401782	chr5_34908379_-	UTR3
CAediting_401783	chr5_34908388_-	UTR3
CAediting_401784	chr5_34908412_-	UTR3
CAediting_401785	chr5_34908425_-	UTR3
CAediting_401786	chr5_34908439_-	UTR3
CAediting_401787	chr5_34908442_-	UTR3
CAediting_401788	chr5_34908448_-	UTR3
CAediting_401789	chr5_34912765_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_401655	chr5_34905954_-	SINE	Alu	AluSx1
CAediting_401656	chr5_34905956_-	SINE	Alu	AluSx1
CAediting_401657	chr5_34905984_-	SINE	Alu	AluSx1
CAediting_401658	chr5_34905985_-	SINE	Alu	AluSx1
CAediting_401659	chr5_34905990_-	SINE	Alu	AluSx1
CAediting_401660	chr5_34906002_-	SINE	Alu	AluSx1
CAediting_401661	chr5_34906007_-	SINE	Alu	AluSx1
CAediting_401662	chr5_34906020_-	SINE	Alu	AluSx1
CAediting_401663	chr5_34906022_-	SINE	Alu	AluSx1
CAediting_401664	chr5_34906027_-	SINE	Alu	AluSx1
CAediting_401665	chr5_34906031_-	SINE	Alu	AluSx1
CAediting_401666	chr5_34906044_-	SINE	Alu	AluSx1
CAediting_401667	chr5_34906050_-	SINE	Alu	AluSx1
CAediting_401668	chr5_34906051_-	SINE	Alu	AluSx1
CAediting_401669	chr5_34906052_-	SINE	Alu	AluSx1
CAediting_401670	chr5_34906057_-	SINE	Alu	AluSx1
CAediting_401671	chr5_34906060_-	SINE	Alu	AluSx1
CAediting_401672	chr5_34906063_-	SINE	Alu	AluSx1
CAediting_401673	chr5_34906066_-	SINE	Alu	AluSx1
CAediting_401674	chr5_34906076_-	SINE	Alu	AluSx1
CAediting_401675	chr5_34906078_-	SINE	Alu	AluSx1
CAediting_401676	chr5_34906087_-	SINE	Alu	AluSx1
CAediting_401677	chr5_34906092_-	SINE	Alu	AluSx1
CAediting_401678	chr5_34906093_-	SINE	Alu	AluSx1
CAediting_401679	chr5_34906119_-	SINE	Alu	AluSx1
CAediting_401680	chr5_34906122_-	SINE	Alu	AluSx1
CAediting_401681	chr5_34906123_-	SINE	Alu	AluSx1
CAediting_401682	chr5_34906124_-	SINE	Alu	AluSx1
CAediting_401683	chr5_34906125_-	SINE	Alu	AluSx1
CAediting_401684	chr5_34906126_-	SINE	Alu	AluSx1
CAediting_401685	chr5_34906128_-	SINE	Alu	AluSx1
CAediting_401686	chr5_34906130_-	SINE	Alu	AluSx1
CAediting_401687	chr5_34906131_-	SINE	Alu	AluSx1
CAediting_401688	chr5_34906132_-	SINE	Alu	AluSx1
CAediting_401689	chr5_34906133_-	SINE	Alu	AluSx1
CAediting_401690	chr5_34906137_-	SINE	Alu	AluSx1
CAediting_401691	chr5_34906149_-	SINE	Alu	AluSx1
CAediting_401692	chr5_34906150_-	SINE	Alu	AluSx1
CAediting_401693	chr5_34906151_-	SINE	Alu	AluSx1
CAediting_401694	chr5_34906159_-	SINE	Alu	AluSx1
CAediting_401695	chr5_34906169_-	SINE	Alu	AluSx1
CAediting_401696	chr5_34906172_-	SINE	Alu	AluSx1
CAediting_401697	chr5_34906180_-	SINE	Alu	AluSx1
CAediting_401698	chr5_34906184_-	SINE	Alu	AluSx1
CAediting_401699	chr5_34906189_-	SINE	Alu	AluSx1
CAediting_401700	chr5_34906203_-	SINE	Alu	AluSx1
CAediting_401701	chr5_34906207_-	SINE	Alu	AluSx1
CAediting_401702	chr5_34906212_-	SINE	Alu	AluSx1
CAediting_401703	chr5_34906221_-	SINE	Alu	AluSx1
CAediting_401704	chr5_34906224_-	SINE	Alu	AluSx1
CAediting_401705	chr5_34906229_-	SINE	Alu	AluSx1
CAediting_401706	chr5_34906230_-	SINE	Alu	AluSx1
CAediting_401707	chr5_34906236_-	SINE	Alu	AluSx1
CAediting_401708	chr5_34906238_-	SINE	Alu	AluSx1
CAediting_401710	chr5_34906373_-	SINE	Alu	AluJo
CAediting_401711	chr5_34906380_-	SINE	Alu	AluJo
CAediting_401712	chr5_34906382_-	SINE	Alu	AluJo
CAediting_401713	chr5_34906394_-	SINE	Alu	AluJo
CAediting_401714	chr5_34906395_-	SINE	Alu	AluJo
CAediting_401715	chr5_34906396_-	SINE	Alu	AluJo
CAediting_401716	chr5_34906413_-	SINE	Alu	AluJo
CAediting_401717	chr5_34906418_-	SINE	Alu	AluJo
CAediting_401718	chr5_34906421_-	SINE	Alu	AluJo
CAediting_401719	chr5_34906422_-	SINE	Alu	AluJo
CAediting_401720	chr5_34906427_-	SINE	Alu	AluJo
CAediting_401721	chr5_34906434_-	SINE	Alu	AluJo
CAediting_401722	chr5_34906441_-	SINE	Alu	AluJo
CAediting_401723	chr5_34906442_-	SINE	Alu	AluJo
CAediting_401724	chr5_34906447_-	SINE	Alu	AluJo
CAediting_401725	chr5_34906459_-	SINE	Alu	AluJo
CAediting_401726	chr5_34906469_-	SINE	Alu	AluJo
CAediting_401727	chr5_34906473_-	SINE	Alu	AluJo
CAediting_401728	chr5_34906482_-	SINE	Alu	AluJo
CAediting_401729	chr5_34906490_-	SINE	Alu	AluJo
CAediting_401730	chr5_34906501_-	SINE	Alu	AluJo
CAediting_401731	chr5_34906515_-	SINE	Alu	AluJo
CAediting_401732	chr5_34906517_-	SINE	Alu	AluJo
CAediting_401733	chr5_34906523_-	SINE	Alu	AluJo
CAediting_401734	chr5_34906527_-	SINE	Alu	AluJo
CAediting_401735	chr5_34906531_-	SINE	Alu	AluJo
CAediting_401736	chr5_34906553_-	SINE	Alu	AluJo
CAediting_401737	chr5_34906556_-	SINE	Alu	AluJo
CAediting_401738	chr5_34906557_-	SINE	Alu	AluJo
CAediting_401739	chr5_34906563_-	SINE	Alu	AluJo
CAediting_401740	chr5_34906571_-	SINE	Alu	AluJo
CAediting_401741	chr5_34906577_-	SINE	Alu	AluJo
CAediting_401742	chr5_34906587_-	SINE	Alu	AluJo
CAediting_401743	chr5_34906589_-	SINE	Alu	AluJo
CAediting_401744	chr5_34906595_-	SINE	Alu	AluJo
CAediting_401745	chr5_34906603_-	SINE	Alu	AluJo
CAediting_401746	chr5_34906630_-	SINE	Alu	AluJo
CAediting_401747	chr5_34906632_-	SINE	Alu	AluJo
CAediting_401748	chr5_34906633_-	SINE	Alu	AluJo
CAediting_401749	chr5_34906635_-	SINE	Alu	AluJo
CAediting_401750	chr5_34906637_-	SINE	Alu	AluJo
CAediting_401751	chr5_34906645_-	SINE	Alu	AluJo
CAediting_401752	chr5_34906651_-	SINE	Alu	AluJo
CAediting_401754	chr5_34908201_-	SINE	Alu	AluSp
CAediting_401755	chr5_34908208_-	SINE	Alu	AluSp
CAediting_401756	chr5_34908216_-	SINE	Alu	AluSp
CAediting_401757	chr5_34908226_-	SINE	Alu	AluSp
CAediting_401758	chr5_34908236_-	SINE	Alu	AluSp
CAediting_401759	chr5_34908239_-	SINE	Alu	AluSp
CAediting_401760	chr5_34908241_-	SINE	Alu	AluSp
CAediting_401761	chr5_34908246_-	SINE	Alu	AluSp
CAediting_401762	chr5_34908270_-	SINE	Alu	AluSp
CAediting_401763	chr5_34908271_-	SINE	Alu	AluSp
CAediting_401764	chr5_34908279_-	SINE	Alu	AluSp
CAediting_401765	chr5_34908280_-	SINE	Alu	AluSp
CAediting_401766	chr5_34908285_-	SINE	Alu	AluSp
CAediting_401767	chr5_34908289_-	SINE	Alu	AluSp
CAediting_401768	chr5_34908302_-	SINE	Alu	AluSp
CAediting_401769	chr5_34908306_-	SINE	Alu	AluSp
CAediting_401770	chr5_34908311_-	SINE	Alu	AluSp
CAediting_401771	chr5_34908312_-	SINE	Alu	AluSp
CAediting_401772	chr5_34908338_-	SINE	Alu	AluSp
CAediting_401773	chr5_34908342_-	SINE	Alu	AluSp
CAediting_401774	chr5_34908345_-	SINE	Alu	AluSp
CAediting_401775	chr5_34908348_-	SINE	Alu	AluSp
CAediting_401776	chr5_34908352_-	SINE	Alu	AluSp
CAediting_401777	chr5_34908353_-	SINE	Alu	AluSp
CAediting_401778	chr5_34908357_-	SINE	Alu	AluSp
CAediting_401779	chr5_34908368_-	SINE	Alu	AluSp
CAediting_401780	chr5_34908372_-	SINE	Alu	AluSp
CAediting_401781	chr5_34908378_-	SINE	Alu	AluSp
CAediting_401782	chr5_34908379_-	SINE	Alu	AluSp
CAediting_401783	chr5_34908388_-	SINE	Alu	AluSp
CAediting_401784	chr5_34908412_-	SINE	Alu	AluSp
CAediting_401785	chr5_34908425_-	SINE	Alu	AluSp
CAediting_401786	chr5_34908439_-	SINE	Alu	AluSp
CAediting_401787	chr5_34908442_-	SINE	Alu	AluSp
CAediting_401788	chr5_34908448_-	SINE	Alu	AluSp
CAediting_401789	chr5_34912765_-	SINE	Alu	AluSq2

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RNA A-to-I editing events in the alternative splicing sites for RAD1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000113456.17.RAD1.

Correlation between RNA A-to-I editing and PSI for ENSG00000113456.17.RAD1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RAD1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

BRCA.CAediting_401705.ENSG00000113456.RAD1.png
Soverview

ESCA.CAediting_401736.ENSG00000113456.RAD1.png
Soverview

KIRP.CAediting_401736.ENSG00000113456.RAD1.png
Soverview

PCPG.CAediting_401747.ENSG00000113456.RAD1.png
Soverview

SARC.CAediting_401670.ENSG00000113456.RAD1.png
Soverview

SARC.CAediting_401736.ENSG00000113456.RAD1.png
Soverview

THCA.CAediting_401705.ENSG00000113456.RAD1.png
Soverview

THCA.CAediting_401706.ENSG00000113456.RAD1.png
Soverview

THCA.CAediting_401736.ENSG00000113456.RAD1.png
Soverview

UCEC.CAediting_401670.ENSG00000113456.RAD1.png
Soverview

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Protein coding region RNA A-to-I editings for RAD1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for RAD1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_401762	chr5_34908270_-	ENSG00000113456.17	ENST00000341754	hsa-miR-4437	34908267	34908273	7mer-m8	34908266	34908286	146.00	-19.53
CAediting_401764	chr5_34908279_-	ENSG00000113456.17	ENST00000341754	hsa-miR-891b	34908275	34908280	6mer	34908274	34908295	150.00	-18.80
CAediting_401771	chr5_34908312_-	ENSG00000113456.17	ENST00000341754	hsa-miR-513a-5p	34908311	34908317	7mer-m8	34908310	34908327	160.00	-21.48
CAediting_401771	chr5_34908312_-	ENSG00000113456.17	ENST00000341754	hsa-miR-513a-5p	34908311	34908317	7mer-m8	34908310	34908327	160.00	-21.48
CAediting_401771	chr5_34908312_-	ENSG00000113456.17	ENST00000341754	hsa-miR-7112-3p	34908308	34908314	7mer-m8	34908307	34908329	163.00	-22.26
CAediting_401774	chr5_34908345_-	ENSG00000113456.17	ENST00000341754	hsa-miR-4742-3p	34908344	34908351	8mer-1a	34908344	34908366	142.00	-9.18
CAediting_401775	chr5_34908348_-	ENSG00000113456.17	ENST00000341754	hsa-miR-153-5p	34908348	34908354	7mer-m8	34908347	34908369	148.00	-8.16
CAediting_401775	chr5_34908348_-	ENSG00000113456.17	ENST00000341754	hsa-miR-3680-3p	34908343	34908350	8mer-1a	34908343	34908365	140.00	-14.24
CAediting_401775	chr5_34908348_-	ENSG00000113456.17	ENST00000341754	hsa-miR-3680-3p	34908343	34908350	8mer-1a	34908343	34908365	140.00	-14.24
CAediting_401778	chr5_34908357_-	ENSG00000113456.17	ENST00000341754	hsa-miR-374b-3p	34908352	34908359	8mer-1a	34908352	34908374	146.00	-10.08
CAediting_401778	chr5_34908357_-	ENSG00000113456.17	ENST00000341754	hsa-miR-4756-3p	34908357	34908363	7mer-m8	34908356	34908378	153.00	-19.56
CAediting_401754	chr5_34908201_-	ENSG00000113456.17	ENST00000341754	hsa-miR-431-5p	34908199	34908205	7mer-m8	34908198	34908218	140.00	-12.64
CAediting_401754	chr5_34908201_-	ENSG00000113456.17	ENST00000341754	hsa-miR-5007-5p	34908196	34908202	7mer-m8	34908195	34908216	164.00	-18.31
CAediting_401754	chr5_34908201_-	ENSG00000113456.17	ENST00000341754	hsa-miR-924	34908197	34908203	7mer-m8	34908196	34908214	148.00	-17.78
CAediting_401755	chr5_34908208_-	ENSG00000113456.17	ENST00000341754	hsa-miR-6772-3p	34908202	34908209	8mer-1a	34908202	34908225	145.00	-20.05
CAediting_401760	chr5_34908241_-	ENSG00000113456.17	ENST00000341754	hsa-miR-4267	34908241	34908247	7mer-m8	34908240	34908255	141.00	-17.69
CAediting_401760	chr5_34908241_-	ENSG00000113456.17	ENST00000341754	hsa-miR-7977	34908239	34908245	7mer-m8	34908238	34908256	154.00	-21.86
CAediting_401761	chr5_34908246_-	ENSG00000113456.17	ENST00000341754	hsa-miR-4690-3p	34908241	34908248	8mer-1a	34908241	34908260	157.00	-28.29
CAediting_401761	chr5_34908246_-	ENSG00000113456.17	ENST00000341754	hsa-miR-5685	34908241	34908248	8mer-1a	34908241	34908261	149.00	-21.54
CAediting_401765	chr5_34908280_-	ENSG00000113456.17	ENST00000341754	hsa-miR-500a-5p	34908277	34908282	6mer	34908276	34908297	141.00	-18.26
CAediting_401767	chr5_34908289_-	ENSG00000113456.17	ENST00000341754	hsa-miR-1913	34908284	34908290	7mer-m8	34908283	34908304	147.00	-24.36
CAediting_401767	chr5_34908289_-	ENSG00000113456.17	ENST00000341754	hsa-miR-6849-3p	34908289	34908295	7mer-m8	34908288	34908309	140.00	-15.93
CAediting_401768	chr5_34908302_-	ENSG00000113456.17	ENST00000341754	hsa-miR-1207-3p	34908302	34908308	7mer-m8	34908301	34908318	145.00	-14.87
CAediting_401768	chr5_34908302_-	ENSG00000113456.17	ENST00000341754	hsa-miR-646	34908300	34908306	7mer-m8	34908299	34908318	148.00	-18.57
CAediting_401776	chr5_34908352_-	ENSG00000113456.17	ENST00000341754	hsa-miR-630	34908346	34908353	8mer-1a	34908346	34908366	158.00	-15.14
CAediting_401777	chr5_34908353_-	ENSG00000113456.17	ENST00000341754	hsa-miR-325	34908352	34908359	8mer-1a	34908352	34908374	145.00	-10.90
CAediting_401779	chr5_34908368_-	ENSG00000113456.17	ENST00000341754	hsa-miR-103a-1-5p	34908367	34908372	6mer	34908366	34908388	141.00	-19.11
CAediting_401779	chr5_34908368_-	ENSG00000113456.17	ENST00000341754	hsa-miR-103a-2-5p	34908367	34908372	6mer	34908366	34908388	141.00	-15.26
CAediting_401779	chr5_34908368_-	ENSG00000113456.17	ENST00000341754	hsa-miR-6815-3p	34908366	34908372	7mer-m8	34908365	34908385	146.00	-15.68
CAediting_401779	chr5_34908368_-	ENSG00000113456.17	ENST00000341754	hsa-miR-942-5p	34908368	34908373	6mer	34908367	34908388	152.00	-16.90
CAediting_401780	chr5_34908372_-	ENSG00000113456.17	ENST00000341754	hsa-miR-662	34908372	34908378	7mer-m8	34908371	34908391	150.00	-23.46
CAediting_401785	chr5_34908425_-	ENSG00000113456.17	ENST00000341754	hsa-miR-4707-5p	34908423	34908429	7mer-m8	34908422	34908444	141.00	-26.61
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-518a-3p	34908435	34908441	7mer-m8	34908434	34908455	145.00	-11.35
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-518a-3p	34908435	34908441	7mer-m8	34908434	34908455	145.00	-11.35
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-518b	34908435	34908441	7mer-m8	34908434	34908454	150.00	-20.18
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-518c-3p	34908435	34908441	7mer-m8	34908434	34908455	151.00	-20.31
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-518d-3p	34908435	34908441	7mer-m8	34908434	34908454	145.00	-21.74
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-518e-3p	34908436	34908442	7mer-m8	34908435	34908454	145.00	-13.16
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-518f-3p	34908435	34908441	7mer-m8	34908434	34908454	146.00	-15.87
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-526a-3p	34908435	34908441	7mer-m8	34908434	34908454	150.00	-15.87
CAediting_401787	chr5_34908442_-	ENSG00000113456.17	ENST00000341754	hsa-miR-371a-3p	34908437	34908443	7mer-m8	34908436	34908458	144.00	-18.13

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_401770	chr5_34908311_-	ENSG00000113456.17	ENST00000341754	hsa-miR-10399-5p	34908310	34908316	7mer-m8	34908309	34908330	152	-11.55
CAediting_401771	chr5_34908312_-	ENSG00000113456.17	ENST00000341754	hsa-miR-10399-5p	34908310	34908316	7mer-m8	34908309	34908330	152	-11.55
CAediting_401757	chr5_34908226_-	ENSG00000113456.17	ENST00000341754	hsa-miR-106a-3p	34908226	34908232	7mer-m8	34908225	34908246	146	-11.06
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-106a-5p	34908435	34908441	7mer-m8	34908434	34908456	151	-11.86
CAediting_401757	chr5_34908226_-	ENSG00000113456.17	ENST00000341754	hsa-miR-122-5p	34908221	34908227	7mer-1a	34908221	34908239	144	-25.73
CAediting_401784	chr5_34908412_-	ENSG00000113456.17	ENST00000341754	hsa-miR-125a-3p	34908407	34908414	8mer-1a	34908407	34908428	140	-19.94
CAediting_401757	chr5_34908226_-	ENSG00000113456.17	ENST00000341754	hsa-miR-130a-3p	34908224	34908230	7mer-m8	34908223	34908244	150	-12.62
CAediting_401757	chr5_34908226_-	ENSG00000113456.17	ENST00000341754	hsa-miR-130b-3p	34908224	34908230	7mer-m8	34908223	34908244	153	-15.31
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-17-5p	34908435	34908441	7mer-m8	34908434	34908456	151	-16.1
CAediting_401779	chr5_34908368_-	ENSG00000113456.17	ENST00000341754	hsa-miR-193b-5p	34908363	34908370	8mer-1a	34908363	34908384	141	-15.13
CAediting_401766	chr5_34908285_-	ENSG00000113456.17	ENST00000341754	hsa-miR-1976	34908280	34908287	8mer-1a	34908280	34908300	149	-24.39
CAediting_401754	chr5_34908201_-	ENSG00000113456.17	ENST00000341754	hsa-miR-19b-1-5p	34908199	34908205	7mer-m8	34908198	34908221	149	-13.4
CAediting_401754	chr5_34908201_-	ENSG00000113456.17	ENST00000341754	hsa-miR-19b-2-5p	34908199	34908205	7mer-m8	34908198	34908220	149	-12.84
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-20a-5p	34908435	34908441	7mer-m8	34908434	34908456	151	-13.99
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-20b-5p	34908435	34908441	7mer-m8	34908434	34908456	151	-16.1
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-302a-3p	34908436	34908442	7mer-m8	34908435	34908457	141	-11.37
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-302b-3p	34908436	34908442	7mer-m8	34908435	34908457	141	-10.55
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-302c-3p	34908436	34908442	7mer-m8	34908435	34908457	141	-12.31
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-302d-3p	34908436	34908442	7mer-m8	34908435	34908455	142	-9.84
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-302e	34908436	34908442	7mer-m8	34908435	34908451	141	-8.62
CAediting_401779	chr5_34908368_-	ENSG00000113456.17	ENST00000341754	hsa-miR-3170	34908363	34908369	7mer-m8	34908362	34908384	141	-13.81
CAediting_401783	chr5_34908388_-	ENSG00000113456.17	ENST00000341754	hsa-miR-3663-5p	34908387	34908393	7mer-m8	34908386	34908405	148	-21.98
CAediting_401757	chr5_34908226_-	ENSG00000113456.17	ENST00000341754	hsa-miR-3666	34908224	34908230	7mer-m8	34908223	34908245	143	-11.71
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-373-3p	34908436	34908442	7mer-m8	34908435	34908457	154	-15.34
CAediting_401757	chr5_34908226_-	ENSG00000113456.17	ENST00000341754	hsa-miR-4295	34908224	34908230	7mer-m8	34908223	34908240	155	-12.01
CAediting_401757	chr5_34908226_-	ENSG00000113456.17	ENST00000341754	hsa-miR-454-3p	34908224	34908230	7mer-m8	34908223	34908244	152	-12.22
CAediting_401785	chr5_34908425_-	ENSG00000113456.17	ENST00000341754	hsa-miR-4638-5p	34908424	34908430	7mer-m8	34908423	34908443	142	-16.85
CAediting_401769	chr5_34908306_-	ENSG00000113456.17	ENST00000341754	hsa-miR-4720-5p	34908305	34908311	7mer-m8	34908304	34908325	153	-15.99
CAediting_401772	chr5_34908338_-	ENSG00000113456.17	ENST00000341754	hsa-miR-4735-5p	34908337	34908343	7mer-m8	34908336	34908357	140	-4.28
CAediting_401773	chr5_34908342_-	ENSG00000113456.17	ENST00000341754	hsa-miR-4735-5p	34908337	34908343	7mer-m8	34908336	34908357	140	-4.28
CAediting_401756	chr5_34908216_-	ENSG00000113456.17	ENST00000341754	hsa-miR-4774-3p	34908211	34908217	7mer-m8	34908210	34908230	141	-13.84
CAediting_401769	chr5_34908306_-	ENSG00000113456.17	ENST00000341754	hsa-miR-4799-3p	34908305	34908311	7mer-m8	34908304	34908323	148	-14.93
CAediting_401762	chr5_34908270_-	ENSG00000113456.17	ENST00000341754	hsa-miR-498-5p	34908270	34908276	7mer-m8	34908269	34908291	142	-10.65
CAediting_401763	chr5_34908271_-	ENSG00000113456.17	ENST00000341754	hsa-miR-498-5p	34908270	34908276	7mer-m8	34908269	34908291	142	-10.65
CAediting_401757	chr5_34908226_-	ENSG00000113456.17	ENST00000341754	hsa-miR-504-3p	34908221	34908228	8mer-1a	34908221	34908242	152	-24.3
CAediting_401787	chr5_34908442_-	ENSG00000113456.17	ENST00000341754	hsa-miR-5089-5p	34908442	34908448	7mer-m8	34908441	34908461	140	-14.38
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-512-3p	34908437	34908443	7mer-m8	34908436	34908457	144	-16.17
CAediting_401787	chr5_34908442_-	ENSG00000113456.17	ENST00000341754	hsa-miR-512-3p	34908437	34908443	7mer-m8	34908436	34908457	144	-16.17
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-512-3p	34908437	34908443	7mer-m8	34908436	34908457	144	-16.17
CAediting_401787	chr5_34908442_-	ENSG00000113456.17	ENST00000341754	hsa-miR-512-3p	34908437	34908443	7mer-m8	34908436	34908457	144	-16.17
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-519d-3p	34908435	34908441	7mer-m8	34908434	34908454	150	-16.76
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-520a-3p	34908436	34908442	7mer-m8	34908435	34908456	140	-10.32
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-520b-3p	34908436	34908442	7mer-m8	34908435	34908454	145	-14.81
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-520c-3p	34908436	34908442	7mer-m8	34908435	34908455	145	-14.81
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-520d-3p	34908436	34908442	7mer-m8	34908435	34908456	140	-12.25
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-520e-3p	34908436	34908442	7mer-m8	34908435	34908455	140	-13.54
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-520h	34908434	34908440	7mer-m8	34908433	34908454	151	-17.91
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-526b-3p	34908435	34908441	7mer-m8	34908434	34908454	150	-14.32
CAediting_401764	chr5_34908279_-	ENSG00000113456.17	ENST00000341754	hsa-miR-5571-5p	34908277	34908283	7mer-m8	34908276	34908298	142	-26.87
CAediting_401765	chr5_34908280_-	ENSG00000113456.17	ENST00000341754	hsa-miR-5571-5p	34908277	34908283	7mer-m8	34908276	34908298	142	-26.87
CAediting_401783	chr5_34908388_-	ENSG00000113456.17	ENST00000341754	hsa-miR-6131	34908386	34908392	7mer-m8	34908385	34908403	140	-18.33
CAediting_401770	chr5_34908311_-	ENSG00000113456.17	ENST00000341754	hsa-miR-6504-3p	34908310	34908316	7mer-m8	34908309	34908330	148	-18.62
CAediting_401771	chr5_34908312_-	ENSG00000113456.17	ENST00000341754	hsa-miR-6504-3p	34908310	34908316	7mer-m8	34908309	34908330	148	-18.62
CAediting_401787	chr5_34908442_-	ENSG00000113456.17	ENST00000341754	hsa-miR-6506-5p	34908441	34908447	7mer-m8	34908440	34908466	148	-24.23
CAediting_401766	chr5_34908285_-	ENSG00000113456.17	ENST00000341754	hsa-miR-6747-3p	34908282	34908289	8mer-1a	34908282	34908304	149	-23.68
CAediting_401761	chr5_34908246_-	ENSG00000113456.17	ENST00000341754	hsa-miR-6784-3p	34908245	34908250	6mer	34908244	34908266	147	-30.55
CAediting_401778	chr5_34908357_-	ENSG00000113456.17	ENST00000341754	hsa-miR-6832-5p	34908356	34908362	7mer-m8	34908355	34908377	142	-15.43
CAediting_401783	chr5_34908388_-	ENSG00000113456.17	ENST00000341754	hsa-miR-6843-3p	34908388	34908394	7mer-m8	34908387	34908406	152	-19.47
CAediting_401783	chr5_34908388_-	ENSG00000113456.17	ENST00000341754	hsa-miR-6848-3p	34908388	34908394	7mer-m8	34908387	34908404	142	-14.3
CAediting_401779	chr5_34908368_-	ENSG00000113456.17	ENST00000341754	hsa-miR-6855-5p	34908363	34908369	7mer-m8	34908362	34908386	145	-18.04
CAediting_401771	chr5_34908312_-	ENSG00000113456.17	ENST00000341754	hsa-miR-7151-3p	34908311	34908318	8mer-1a	34908311	34908327	142	-13.26
CAediting_401788	chr5_34908448_-	ENSG00000113456.17	ENST00000341754	hsa-miR-9-3p	34908447	34908453	7mer-1a	34908447	34908469	140	-13.22
CAediting_401788	chr5_34908448_-	ENSG00000113456.17	ENST00000341754	hsa-miR-9-3p	34908447	34908453	7mer-1a	34908447	34908469	140	-13.22
CAediting_401788	chr5_34908448_-	ENSG00000113456.17	ENST00000341754	hsa-miR-9-3p	34908447	34908453	7mer-1a	34908447	34908469	140	-13.22
CAediting_401786	chr5_34908439_-	ENSG00000113456.17	ENST00000341754	hsa-miR-93-5p	34908435	34908441	7mer-m8	34908434	34908456	151	-19.48
CAediting_401769	chr5_34908306_-	ENSG00000113456.17	ENST00000341754	hsa-miR-9851-5p	34908304	34908310	7mer-m8	34908303	34908324	153	-14.75

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229415	chr17_67471547_+	ENSG00000113456.17	ENST00000341754	hsa-miR-548aa	34908448	34908455	8mer-1a	34908448	34908471	157	-22.57
CAediting_117844	chr1_162342605_+	ENSG00000113456.17	ENST00000341754	hsa-miR-556-3p	34908208	34908215	8mer-1a	34908208	34908228	145	-10.27
CAediting_228905	chr2_188297554_+	ENSG00000113456.17	ENST00000341754	hsa-miR-561-3p	34908196	34908202	7mer-m8	34908195	34908215	142	-12.37
CAediting_1351755	chr19_40282625_-	ENSG00000113456.17	ENST00000325577	hsa-miR-641	34911573	34911579	7mer-m8	34911572	34911595	144	-14.61
CAediting_1351755	chr19_40282625_-	ENSG00000113456.17	ENST00000513914	hsa-miR-641	34911573	34911579	7mer-m8	34911572	34911595	144	-14.61
CAediting_1524209	chrX_134546392_-	ENSG00000113456.17	ENST00000325577	hsa-miR-503-5p	34908797	34908802	6mer	34908796	34908817	151	-21.74
CAediting_1524209	chrX_134546392_-	ENSG00000113456.17	ENST00000513914	hsa-miR-503-5p	34908797	34908802	6mer	34908796	34908817	151	-21.74

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for RAD1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000382038.5	protein_coding
ENST00000341754.7	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_401655	ENST00000382038.5	chr5_34905954_-	-1808.70	-1808.60	-1960.60
CAediting_401656	ENST00000382038.5	chr5_34905956_-	-1809.50	-1808.60	-1960.60
CAediting_401657	ENST00000382038.5	chr5_34905984_-	-1808.30	-1808.60	-1960.60
CAediting_401658	ENST00000382038.5	chr5_34905985_-	-1808.30	-1808.60	-1960.60
CAediting_401659	ENST00000382038.5	chr5_34905990_-	-1809.80	-1808.60	-1960.60
CAediting_401660	ENST00000382038.5	chr5_34906002_-	-1807.90	-1808.60	-1960.60
CAediting_401661	ENST00000382038.5	chr5_34906007_-	-1808.90	-1808.60	-1960.60
CAediting_401662	ENST00000382038.5	chr5_34906020_-	-1808.10	-1808.60	-1960.60
CAediting_401663	ENST00000382038.5	chr5_34906022_-	-1809.20	-1808.60	-1960.60
CAediting_401664	ENST00000382038.5	chr5_34906027_-	-1807.90	-1808.60	-1960.60
CAediting_401665	ENST00000382038.5	chr5_34906031_-	-1808.60	-1808.60	-1960.60
CAediting_401666	ENST00000382038.5	chr5_34906044_-	-1810.30	-1808.60	-1960.60
CAediting_401667	ENST00000382038.5	chr5_34906050_-	-1808.30	-1808.60	-1960.60
CAediting_401668	ENST00000382038.5	chr5_34906051_-	-1810.20	-1808.60	-1960.60
CAediting_401669	ENST00000382038.5	chr5_34906052_-	-1807.30	-1808.60	-1960.60
CAediting_401670	ENST00000382038.5	chr5_34906057_-	-1812.20	-1808.60	-1960.60
CAediting_401671	ENST00000382038.5	chr5_34906060_-	-1808.90	-1808.60	-1960.60
CAediting_401672	ENST00000382038.5	chr5_34906063_-	-1810.20	-1808.60	-1960.60
CAediting_401673	ENST00000382038.5	chr5_34906066_-	-1810.50	-1808.60	-1960.60
CAediting_401674	ENST00000382038.5	chr5_34906076_-	-1807.60	-1808.60	-1960.60
CAediting_401675	ENST00000382038.5	chr5_34906078_-	-1815.50	-1808.60	-1960.60
CAediting_401676	ENST00000382038.5	chr5_34906087_-	-1809.80	-1808.60	-1960.60
CAediting_401677	ENST00000382038.5	chr5_34906092_-	-1814.80	-1808.60	-1960.60
CAediting_401678	ENST00000382038.5	chr5_34906093_-	-1808.30	-1808.60	-1960.60
CAediting_401679	ENST00000382038.5	chr5_34906119_-	-1808.30	-1808.60	-1960.60
CAediting_401680	ENST00000382038.5	chr5_34906122_-	-1808.60	-1808.60	-1960.60
CAediting_401681	ENST00000382038.5	chr5_34906123_-	-1808.70	-1808.60	-1960.60
CAediting_401682	ENST00000382038.5	chr5_34906124_-	-1808.70	-1808.60	-1960.60
CAediting_401683	ENST00000382038.5	chr5_34906125_-	-1808.70	-1808.60	-1960.60
CAediting_401684	ENST00000382038.5	chr5_34906126_-	-1808.30	-1808.60	-1960.60
CAediting_401685	ENST00000382038.5	chr5_34906128_-	-1808.60	-1808.60	-1960.60
CAediting_401686	ENST00000382038.5	chr5_34906130_-	-1808.60	-1808.60	-1960.60
CAediting_401687	ENST00000382038.5	chr5_34906131_-	-1808.70	-1808.60	-1960.60
CAediting_401688	ENST00000382038.5	chr5_34906132_-	-1808.70	-1808.60	-1960.60
CAediting_401689	ENST00000382038.5	chr5_34906133_-	-1808.70	-1808.60	-1960.60
CAediting_401690	ENST00000382038.5	chr5_34906137_-	-1808.60	-1808.60	-1960.60
CAediting_401691	ENST00000382038.5	chr5_34906149_-	-1808.60	-1808.60	-1960.60
CAediting_401692	ENST00000382038.5	chr5_34906150_-	-1808.70	-1808.60	-1960.60
CAediting_401693	ENST00000382038.5	chr5_34906151_-	-1808.20	-1808.60	-1960.60
CAediting_401694	ENST00000382038.5	chr5_34906159_-	-1808.60	-1808.60	-1960.60
CAediting_401695	ENST00000382038.5	chr5_34906169_-	-1808.60	-1808.60	-1960.60
CAediting_401696	ENST00000382038.5	chr5_34906172_-	-1808.00	-1808.60	-1960.60
CAediting_401697	ENST00000382038.5	chr5_34906180_-	-1808.60	-1808.60	-1960.60
CAediting_401698	ENST00000382038.5	chr5_34906184_-	-1807.90	-1808.60	-1960.60
CAediting_401699	ENST00000382038.5	chr5_34906189_-	-1807.70	-1808.60	-1960.60
CAediting_401700	ENST00000382038.5	chr5_34906203_-	-1812.40	-1808.60	-1960.60
CAediting_401701	ENST00000382038.5	chr5_34906207_-	-1807.70	-1808.60	-1960.60
CAediting_401702	ENST00000382038.5	chr5_34906212_-	-1815.20	-1808.60	-1960.60
CAediting_401703	ENST00000382038.5	chr5_34906221_-	-1811.20	-1808.60	-1960.60
CAediting_401704	ENST00000382038.5	chr5_34906224_-	-1807.90	-1808.60	-1960.60
CAediting_401705	ENST00000382038.5	chr5_34906229_-	-1808.60	-1808.60	-1960.60
CAediting_401706	ENST00000382038.5	chr5_34906230_-	-1808.70	-1808.60	-1960.60
CAediting_401707	ENST00000382038.5	chr5_34906236_-	-1814.00	-1808.60	-1960.60
CAediting_401708	ENST00000382038.5	chr5_34906238_-	-1808.20	-1808.60	-1960.60
CAediting_401709	ENST00000382038.5	chr5_34906257_-	-1808.30	-1808.60	-1960.60
CAediting_401710	ENST00000382038.5	chr5_34906373_-	-1807.70	-1808.60	-1960.60
CAediting_401711	ENST00000382038.5	chr5_34906380_-	-1807.90	-1808.60	-1960.60
CAediting_401712	ENST00000382038.5	chr5_34906382_-	-1808.60	-1808.60	-1960.60
CAediting_401713	ENST00000382038.5	chr5_34906394_-	-1808.20	-1808.60	-1960.60
CAediting_401714	ENST00000382038.5	chr5_34906395_-	-1808.70	-1808.60	-1960.60
CAediting_401715	ENST00000382038.5	chr5_34906396_-	-1808.30	-1808.60	-1960.60
CAediting_401716	ENST00000382038.5	chr5_34906413_-	-1809.00	-1808.60	-1960.60
CAediting_401717	ENST00000382038.5	chr5_34906418_-	-1812.30	-1808.60	-1960.60
CAediting_401718	ENST00000382038.5	chr5_34906421_-	-1813.30	-1808.60	-1960.60
CAediting_401719	ENST00000382038.5	chr5_34906422_-	-1808.30	-1808.60	-1960.60
CAediting_401720	ENST00000382038.5	chr5_34906427_-	-1807.70	-1808.60	-1960.60
CAediting_401721	ENST00000382038.5	chr5_34906434_-	-1808.60	-1808.60	-1960.60
CAediting_401722	ENST00000382038.5	chr5_34906441_-	-1808.90	-1808.60	-1960.60
CAediting_401723	ENST00000382038.5	chr5_34906442_-	-1815.00	-1808.60	-1960.60
CAediting_401724	ENST00000382038.5	chr5_34906447_-	-1807.30	-1808.60	-1960.60
CAediting_401725	ENST00000382038.5	chr5_34906459_-	-1807.60	-1808.60	-1960.60
CAediting_401726	ENST00000382038.5	chr5_34906469_-	-1814.70	-1808.60	-1960.60
CAediting_401727	ENST00000382038.5	chr5_34906473_-	-1808.30	-1808.60	-1960.60
CAediting_401728	ENST00000382038.5	chr5_34906482_-	-1808.60	-1808.60	-1960.60
CAediting_401729	ENST00000382038.5	chr5_34906490_-	-1808.60	-1808.60	-1960.60
CAediting_401730	ENST00000382038.5	chr5_34906501_-	-1805.20	-1808.60	-1960.60
CAediting_401731	ENST00000382038.5	chr5_34906515_-	-1807.90	-1808.60	-1960.60
CAediting_401732	ENST00000382038.5	chr5_34906517_-	-1808.60	-1808.60	-1960.60
CAediting_401733	ENST00000382038.5	chr5_34906523_-	-1812.40	-1808.60	-1960.60
CAediting_401734	ENST00000382038.5	chr5_34906527_-	-1808.30	-1808.60	-1960.60
CAediting_401735	ENST00000382038.5	chr5_34906531_-	-1809.20	-1808.60	-1960.60
CAediting_401736	ENST00000382038.5	chr5_34906553_-	-1812.80	-1808.60	-1960.60
CAediting_401737	ENST00000382038.5	chr5_34906556_-	-1808.30	-1808.60	-1960.60
CAediting_401738	ENST00000382038.5	chr5_34906557_-	-1808.30	-1808.60	-1960.60
CAediting_401739	ENST00000382038.5	chr5_34906563_-	-1809.50	-1808.60	-1960.60
CAediting_401740	ENST00000382038.5	chr5_34906571_-	-1809.10	-1808.60	-1960.60
CAediting_401741	ENST00000382038.5	chr5_34906577_-	-1807.80	-1808.60	-1960.60
CAediting_401742	ENST00000382038.5	chr5_34906587_-	-1814.80	-1808.60	-1960.60
CAediting_401743	ENST00000382038.5	chr5_34906589_-	-1809.20	-1808.60	-1960.60
CAediting_401744	ENST00000382038.5	chr5_34906595_-	-1813.60	-1808.60	-1960.60
CAediting_401745	ENST00000382038.5	chr5_34906603_-	-1815.30	-1808.60	-1960.60
CAediting_401746	ENST00000382038.5	chr5_34906630_-	-1813.00	-1808.60	-1960.60
CAediting_401747	ENST00000382038.5	chr5_34906632_-	-1812.70	-1808.60	-1960.60
CAediting_401748	ENST00000382038.5	chr5_34906633_-	-1812.70	-1808.60	-1960.60
CAediting_401749	ENST00000382038.5	chr5_34906635_-	-1810.80	-1808.60	-1960.60
CAediting_401750	ENST00000382038.5	chr5_34906637_-	-1809.60	-1808.60	-1960.60
CAediting_401751	ENST00000382038.5	chr5_34906645_-	-1814.00	-1808.60	-1960.60
CAediting_401752	ENST00000382038.5	chr5_34906651_-	-1812.80	-1808.60	-1960.60
CAediting_401753	ENST00000382038.5	chr5_34908101_-	-1808.60	-1808.60	-1960.60
CAediting_401754	ENST00000382038.5	chr5_34908201_-	-1809.80	-1808.60	-1960.60
CAediting_401755	ENST00000382038.5	chr5_34908208_-	-1810.00	-1808.60	-1960.60
CAediting_401756	ENST00000382038.5	chr5_34908216_-	-1814.50	-1808.60	-1960.60
CAediting_401757	ENST00000382038.5	chr5_34908226_-	-1808.60	-1808.60	-1960.60
CAediting_401758	ENST00000382038.5	chr5_34908236_-	-1809.70	-1808.60	-1960.60
CAediting_401759	ENST00000382038.5	chr5_34908239_-	-1810.80	-1808.60	-1960.60
CAediting_401760	ENST00000382038.5	chr5_34908241_-	-1808.60	-1808.60	-1960.60
CAediting_401761	ENST00000382038.5	chr5_34908246_-	-1810.00	-1808.60	-1960.60
CAediting_401762	ENST00000382038.5	chr5_34908270_-	-1813.30	-1808.60	-1960.60
CAediting_401763	ENST00000382038.5	chr5_34908271_-	-1808.70	-1808.60	-1960.60
CAediting_401764	ENST00000382038.5	chr5_34908279_-	-1809.10	-1808.60	-1960.60
CAediting_401765	ENST00000382038.5	chr5_34908280_-	-1810.60	-1808.60	-1960.60
CAediting_401766	ENST00000382038.5	chr5_34908285_-	-1808.60	-1808.60	-1960.60
CAediting_401767	ENST00000382038.5	chr5_34908289_-	-1808.00	-1808.60	-1960.60
CAediting_401768	ENST00000382038.5	chr5_34908302_-	-1813.00	-1808.60	-1960.60
CAediting_401769	ENST00000382038.5	chr5_34908306_-	-1814.80	-1808.60	-1960.60
CAediting_401770	ENST00000382038.5	chr5_34908311_-	-1809.50	-1808.60	-1960.60
CAediting_401771	ENST00000382038.5	chr5_34908312_-	-1809.70	-1808.60	-1960.60
CAediting_401772	ENST00000382038.5	chr5_34908338_-	-1809.60	-1808.60	-1960.60
CAediting_401773	ENST00000382038.5	chr5_34908342_-	-1809.70	-1808.60	-1960.60
CAediting_401774	ENST00000382038.5	chr5_34908345_-	-1808.60	-1808.60	-1960.60
CAediting_401775	ENST00000382038.5	chr5_34908348_-	-1808.80	-1808.60	-1960.60
CAediting_401776	ENST00000382038.5	chr5_34908352_-	-1809.30	-1808.60	-1960.60
CAediting_401777	ENST00000382038.5	chr5_34908353_-	-1808.60	-1808.60	-1960.60
CAediting_401778	ENST00000382038.5	chr5_34908357_-	-1812.10	-1808.60	-1960.60
CAediting_401779	ENST00000382038.5	chr5_34908368_-	-1808.60	-1808.60	-1960.60
CAediting_401780	ENST00000382038.5	chr5_34908372_-	-1809.30	-1808.60	-1960.60
CAediting_401781	ENST00000382038.5	chr5_34908378_-	-1811.40	-1808.60	-1960.60
CAediting_401782	ENST00000382038.5	chr5_34908379_-	-1809.90	-1808.60	-1960.60
CAediting_401783	ENST00000382038.5	chr5_34908388_-	-1811.00	-1808.60	-1960.60
CAediting_401784	ENST00000382038.5	chr5_34908412_-	-1813.80	-1808.60	-1960.60
CAediting_401785	ENST00000382038.5	chr5_34908425_-	-1810.40	-1808.60	-1960.60
CAediting_401786	ENST00000382038.5	chr5_34908439_-	-1808.60	-1808.60	-1960.60
CAediting_401787	ENST00000382038.5	chr5_34908442_-	-1812.80	-1808.60	-1960.60
CAediting_401788	ENST00000382038.5	chr5_34908448_-	-1812.90	-1808.60	-1960.60
CAediting_401754	ENST00000341754.7	chr5_34908201_-	-734.10	-731.20	-775.50
CAediting_401755	ENST00000341754.7	chr5_34908208_-	-732.90	-731.20	-775.50
CAediting_401756	ENST00000341754.7	chr5_34908216_-	-737.80	-731.20	-775.50
CAediting_401757	ENST00000341754.7	chr5_34908226_-	-730.90	-731.20	-775.50
CAediting_401758	ENST00000341754.7	chr5_34908236_-	-732.00	-731.20	-775.50
CAediting_401759	ENST00000341754.7	chr5_34908239_-	-733.10	-731.20	-775.50
CAediting_401760	ENST00000341754.7	chr5_34908241_-	-732.00	-731.20	-775.50
CAediting_401761	ENST00000341754.7	chr5_34908246_-	-732.30	-731.20	-775.50
CAediting_401762	ENST00000341754.7	chr5_34908270_-	-737.90	-731.20	-775.50
CAediting_401763	ENST00000341754.7	chr5_34908271_-	-730.90	-731.20	-775.50
CAediting_401764	ENST00000341754.7	chr5_34908279_-	-731.40	-731.20	-775.50
CAediting_401765	ENST00000341754.7	chr5_34908280_-	-732.90	-731.20	-775.50
CAediting_401766	ENST00000341754.7	chr5_34908285_-	-730.40	-731.20	-775.50
CAediting_401767	ENST00000341754.7	chr5_34908289_-	-730.30	-731.20	-775.50
CAediting_401768	ENST00000341754.7	chr5_34908302_-	-731.60	-731.20	-775.50
CAediting_401769	ENST00000341754.7	chr5_34908306_-	-737.40	-731.20	-775.50
CAediting_401770	ENST00000341754.7	chr5_34908311_-	-732.70	-731.20	-775.50
CAediting_401771	ENST00000341754.7	chr5_34908312_-	-731.50	-731.20	-775.50
CAediting_401772	ENST00000341754.7	chr5_34908338_-	-735.50	-731.20	-775.50
CAediting_401773	ENST00000341754.7	chr5_34908342_-	-731.20	-731.20	-775.50
CAediting_401774	ENST00000341754.7	chr5_34908345_-	-731.20	-731.20	-775.50
CAediting_401775	ENST00000341754.7	chr5_34908348_-	-731.20	-731.20	-775.50
CAediting_401776	ENST00000341754.7	chr5_34908352_-	-731.20	-731.20	-775.50
CAediting_401777	ENST00000341754.7	chr5_34908353_-	-731.20	-731.20	-775.50
CAediting_401778	ENST00000341754.7	chr5_34908357_-	-731.40	-731.20	-775.50
CAediting_401779	ENST00000341754.7	chr5_34908368_-	-731.50	-731.20	-775.50
CAediting_401780	ENST00000341754.7	chr5_34908372_-	-738.10	-731.20	-775.50
CAediting_401781	ENST00000341754.7	chr5_34908378_-	-731.20	-731.20	-775.50
CAediting_401782	ENST00000341754.7	chr5_34908379_-	-730.90	-731.20	-775.50
CAediting_401783	ENST00000341754.7	chr5_34908388_-	-730.50	-731.20	-775.50
CAediting_401784	ENST00000341754.7	chr5_34908412_-	-732.70	-731.20	-775.50
CAediting_401785	ENST00000341754.7	chr5_34908425_-	-730.40	-731.20	-775.50
CAediting_401786	ENST00000341754.7	chr5_34908439_-	-736.60	-731.20	-775.50
CAediting_401787	ENST00000341754.7	chr5_34908442_-	-731.70	-731.20	-775.50
CAediting_401788	ENST00000341754.7	chr5_34908448_-	-731.30	-731.20	-775.50

Top

Relation with ADAR for RAD1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_401668	chr5_34906051_-	0.0110044196311257	0.193444066456641	.	.	.	.
GBM	CAediting_401668	chr5_34906051_-	.	.	.	.	0.0147812813070224	0.257658589948115
HNSC	CAediting_401668	chr5_34906051_-	.	.	0.0298337861544247	0.181735525671982	.	.
STAD	CAediting_401668	chr5_34906051_-	0.0234713425689267	0.211193339711706	.	.	.	.
SKCM	CAediting_401668	chr5_34906051_-	.	.	.	.	0.0115907631486072	0.181846241116919
HNSC	CAediting_401669	chr5_34906052_-	.	.	0.00339458749435326	0.262187965931201	.	.
GBM	CAediting_401670	chr5_34906057_-	0.0125041083310831	0.207668123883645	.	.	.	.
SKCM	CAediting_401670	chr5_34906057_-	0.000184392508758791	0.21463375903359	.	.	.	.
UCS	CAediting_401670	chr5_34906057_-	0.00442143889721368	0.395962924034193	.	.	.	.
THYM	CAediting_401670	chr5_34906057_-	.	.	.	.	0.0244951663619522	0.249825020378841
BRCA	CAediting_401677	chr5_34906092_-	0.000246542786622154	0.224227482749803	.	.	.	.
CESC	CAediting_401677	chr5_34906092_-	0.00992093484283745	0.357897961274803	.	.	.	.
GBM	CAediting_401677	chr5_34906092_-	7.18414934578089e-06	0.418697086362942	.	.	.	.
BRCA	CAediting_401678	chr5_34906093_-	5.17957127140129e-07	0.263365999158842	.	.	.	.
CESC	CAediting_401678	chr5_34906093_-	0.000211905152919796	0.378973628240393	.	.	.	.
LUSC	CAediting_401678	chr5_34906093_-	0.00385061068187092	0.251816751110179	.	.	.	.
KIRC	CAediting_401678	chr5_34906093_-	.	.	.	.	0.0200750564809701	0.268030745258781
OV	CAediting_401678	chr5_34906093_-	0.01375222620659	0.236446433024962	.	.	.	.
SKCM	CAediting_401678	chr5_34906093_-	3.02398948869613e-05	0.440895465744729	.	.	.	.
SARC	CAediting_401678	chr5_34906093_-	0.00558295953261645	0.307149434693346	.	.	.	.
LGG	CAediting_401690	chr5_34906137_-	0.0213235587759569	0.299220995244223	.	.	.	.
BRCA	CAediting_401690	chr5_34906137_-	4.57476379638925e-08	0.328643363091877	.	.	.	.
LUSC	CAediting_401690	chr5_34906137_-	0.0140534225709657	0.239046738396902	.	.	.	.
GBM	CAediting_401690	chr5_34906137_-	0.00688877876073388	0.345311751642637	.	.	.	.
STAD	CAediting_401690	chr5_34906137_-	.	.	.	.	0.0417657447934413	0.218778277655915
ESCA	CAediting_401690	chr5_34906137_-	0.0146043831061189	0.27046426379517	.	.	.	.
BRCA	CAediting_401695	chr5_34906169_-	4.54528255646701e-09	0.404387615759164	.	.	.	.
LUAD	CAediting_401695	chr5_34906169_-	0.00480443704091051	0.282643004178676	.	.	.	.
LUSC	CAediting_401695	chr5_34906169_-	0.0463585444350287	0.272317103024149	.	.	.	.
OV	CAediting_401695	chr5_34906169_-	0.0160602846469091	0.254578014745231	.	.	.	.
BRCA	CAediting_401702	chr5_34906212_-	0.000774030792008301	0.327677627895972	.	.	.	.
BRCA	CAediting_401704	chr5_34906224_-	0.00293367248469825	0.242897755070749	.	.	.	.
BRCA	CAediting_401705	chr5_34906229_-	8.50996187758086e-08	0.204499662439616	.	.	.	.
CESC	CAediting_401705	chr5_34906229_-	0.00462689806959771	0.186514441867664	.	.	.	.
LUSC	CAediting_401705	chr5_34906229_-	4.17157535336201e-05	0.210498772590649	.	.	0.00264872977555252	0.155211756993854
GBM	CAediting_401705	chr5_34906229_-	0.0374829588842979	0.179271622612881	.	.	.	.
PRAD	CAediting_401705	chr5_34906229_-	0.0181787594052461	0.130159869695733	.	.	.	.
HNSC	CAediting_401705	chr5_34906229_-	1.18291733634715e-05	0.278609280968848	.	.	.	.
THCA	CAediting_401705	chr5_34906229_-	0.00435172553689447	0.148930503672706	.	.	.	.
KIRP	CAediting_401705	chr5_34906229_-	0.00829995965865651	0.260053134983174	.	.	.	.
ACC	CAediting_401705	chr5_34906229_-	0.000133003335229175	0.509761299713527	0.00166000758050998	0.429494705401335	.	.
OV	CAediting_401705	chr5_34906229_-	0.0184314045172105	0.16865004348543	.	.	.	.
PCPG	CAediting_401705	chr5_34906229_-	.	.	0.0261362361948977	0.2737553861868	.	.
SKCM	CAediting_401705	chr5_34906229_-	2.98192471606985e-06	0.262182983360592	.	.	.	.
SARC	CAediting_401705	chr5_34906229_-	8.59667971373501e-05	0.279569351285705	.	.	.	.
TGCT	CAediting_401705	chr5_34906229_-	0.000106402659716651	0.511513961834274	.	.	.	.
BLCA	CAediting_401706	chr5_34906230_-	9.76896836042199e-05	0.271999570962057	.	.	.	.
BRCA	CAediting_401706	chr5_34906230_-	2.9027225495559e-13	0.274989669494639	.	.	.	.
CESC	CAediting_401706	chr5_34906230_-	0.00193263814830015	0.202531077307125	.	.	.	.
LUAD	CAediting_401706	chr5_34906230_-	0.0250599567653403	0.130886002293141	.	.	.	.
LUSC	CAediting_401706	chr5_34906230_-	2.71686540315587e-07	0.263824746933223	.	.	.	.
GBM	CAediting_401706	chr5_34906230_-	0.00133288106504772	0.270501206769089	.	.	.	.
PRAD	CAediting_401706	chr5_34906230_-	0.00043600336790064	0.19428976316064	.	.	.	.
HNSC	CAediting_401706	chr5_34906230_-	6.41972267433406e-06	0.286039626146838	.	.	.	.
THCA	CAediting_401706	chr5_34906230_-	4.34660241092945e-07	0.262195677012821	.	.	.	.
KIRC	CAediting_401706	chr5_34906230_-	0.00910035279049869	0.184930350895373	.	.	.	.
KIRP	CAediting_401706	chr5_34906230_-	0.000218092046493823	0.361658733964851	.	.	.	.
ACC	CAediting_401706	chr5_34906230_-	6.95600886312648e-05	0.514254840022347	.	.	.	.
OV	CAediting_401706	chr5_34906230_-	0.00335200214393087	0.210698734434154	.	.	.	.
SKCM	CAediting_401706	chr5_34906230_-	2.93374357918284e-06	0.269678183610282	.	.	.	.
SARC	CAediting_401706	chr5_34906230_-	5.18398139536781e-06	0.324619550758776	.	.	.	.
TGCT	CAediting_401706	chr5_34906230_-	0.000190757016693351	0.486608861643462	.	.	.	.
THYM	CAediting_401706	chr5_34906230_-	.	.	.	.	0.000305921920226062	0.405615405482979
BLCA	CAediting_401707	chr5_34906236_-	0.00653717330986944	0.263838804929329	.	.	.	.
LGG	CAediting_401707	chr5_34906236_-	.	.	0.00490956805873979	0.177733657881471	.	.
BRCA	CAediting_401707	chr5_34906236_-	1.38270394119663e-05	0.230681618954252	.	.	.	.
LUAD	CAediting_401707	chr5_34906236_-	0.000790097869642399	0.245963237359878	.	.	.	.
LUSC	CAediting_401707	chr5_34906236_-	8.78951211843193e-05	0.275055657323899	.	.	.	.
GBM	CAediting_401707	chr5_34906236_-	0.0183398616301369	0.246830616531347	0.0360287281405653	0.220123180593435	.	.
ESCA	CAediting_401707	chr5_34906236_-	6.6223967073118e-05	0.418846683626384	.	.	.	.
SKCM	CAediting_401707	chr5_34906236_-	0.00151455225913059	0.245018234458907	.	.	.	.
SARC	CAediting_401707	chr5_34906236_-	0.00247584489374856	0.272712454346835	.	.	.	.
BLCA	CAediting_401709	chr5_34906257_-	.	.	0.0154080997762405	0.301683987471767	.	.
BRCA	CAediting_401709	chr5_34906257_-	3.89976686626981e-25	0.51596620924927	.	.	.	.
LUAD	CAediting_401709	chr5_34906257_-	4.26210344836024e-06	0.382705656247483	.	.	.	.
LUSC	CAediting_401709	chr5_34906257_-	4.90536495391541e-08	0.487762488722254	.	.	.	.
PRAD	CAediting_401709	chr5_34906257_-	0.0250344172863585	0.258677067492821	.	.	.	.
HNSC	CAediting_401709	chr5_34906257_-	.	.	0.040913228890445	0.233569102000652	.	.
SKCM	CAediting_401709	chr5_34906257_-	0.00168852510538399	0.356585130771821	.	.	.	.
SARC	CAediting_401709	chr5_34906257_-	2.42338859448414e-05	0.520084336202976	.	.	.	.
BLCA	CAediting_401712	chr5_34906382_-	0.0430712813367404	0.210269554067788	0.00387263666449004	0.296744301914389	.	.
LGG	CAediting_401712	chr5_34906382_-	.	.	9.78224884056822e-13	0.443358510177643	0.0382823531769621	0.135250116454446
BRCA	CAediting_401712	chr5_34906382_-	8.08650173387264e-23	0.457121554042731	.	.	.	.
CESC	CAediting_401712	chr5_34906382_-	1.91919006620552e-05	0.376496682340924	.	.	.	.
LUAD	CAediting_401712	chr5_34906382_-	6.15386080394241e-05	0.321134569935584	.	.	.	.
LUSC	CAediting_401712	chr5_34906382_-	1.49141430762454e-11	0.474544074073709	.	.	.	.
PRAD	CAediting_401712	chr5_34906382_-	0.0184048319969645	0.204179065288143	.	.	.	.
HNSC	CAediting_401712	chr5_34906382_-	0.000928730495667709	0.369923723217998	.	.	.	.
KIRC	CAediting_401712	chr5_34906382_-	0.001325486325335	0.37628416121936	.	.	.	.
ESCA	CAediting_401712	chr5_34906382_-	0.0023030987852255	0.3244883966629	.	.	.	.
OV	CAediting_401712	chr5_34906382_-	1.14319843124831e-05	0.336233212359549	.	.	.	.
SKCM	CAediting_401712	chr5_34906382_-	0.000855175729790363	0.278692940312972	.	.	.	.
SARC	CAediting_401712	chr5_34906382_-	8.82280931626747e-07	0.448699131822426	.	.	.	.
BRCA	CAediting_401718	chr5_34906421_-	3.68730210463505e-05	0.204260796387296	.	.	.	.
LUAD	CAediting_401718	chr5_34906421_-	0.00151477774734872	0.280788633130862	.	.	.	.
LUSC	CAediting_401718	chr5_34906421_-	0.0299165156734187	0.183582766456049	.	.	.	.
OV	CAediting_401718	chr5_34906421_-	0.00584228073452207	0.264816728151587	.	.	.	.
SKCM	CAediting_401718	chr5_34906421_-	.	.	.	.	0.0123898535831928	0.278431943507363
BRCA	CAediting_401722	chr5_34906441_-	8.84514643000897e-05	0.380068203779132	.	.	.	.
BLCA	CAediting_401723	chr5_34906442_-	8.80925358507094e-10	0.383257786515261	6.4721573315147e-07	0.315311280748315	.	.
LGG	CAediting_401723	chr5_34906442_-	0.0179256866345981	0.111426637478902	1.13697595902229e-13	0.340051259560712	0.00679182699548021	0.127296472070603
BRCA	CAediting_401723	chr5_34906442_-	6.30783235039419e-52	0.482971081202289	.	.	.	.
LIHC	CAediting_401723	chr5_34906442_-	0.0101709860178783	0.301079244652561	.	.	.	.
CESC	CAediting_401723	chr5_34906442_-	5.01814841476523e-14	0.473431738697615	.	.	.	.
LUAD	CAediting_401723	chr5_34906442_-	2.69660352028386e-11	0.346742178416488	.	.	.	.
COAD	CAediting_401723	chr5_34906442_-	0.000246173786814521	0.304111770691338	.	.	.	.
LUSC	CAediting_401723	chr5_34906442_-	9.33010152425872e-16	0.399415720672967	.	.	.	.
GBM	CAediting_401723	chr5_34906442_-	0.00882214952377382	0.228843897944636	.	.	.	.
PRAD	CAediting_401723	chr5_34906442_-	2.79553887489579e-06	0.249515811239883	.	.	.	.
HNSC	CAediting_401723	chr5_34906442_-	3.56154735836337e-07	0.322823115028494	.	.	.	.
THCA	CAediting_401723	chr5_34906442_-	0.00636259935437805	0.139376200734421	.	.	.	.
UCEC	CAediting_401723	chr5_34906442_-	8.09421715763331e-06	0.425888295973992	.	.	.	.
KIRP	CAediting_401723	chr5_34906442_-	.	.	0.00889457532257313	0.245060283351373	.	.
ESCA	CAediting_401723	chr5_34906442_-	0.000942209931870603	0.318133315638362	.	.	.	.
OV	CAediting_401723	chr5_34906442_-	2.78279882962708e-07	0.363268892378662	.	.	.	.
PAAD	CAediting_401723	chr5_34906442_-	0.0102286500133249	0.291046519055828	.	.	.	.
PCPG	CAediting_401723	chr5_34906442_-	0.000634301392889375	0.334281260615583	.	.	.	.
SKCM	CAediting_401723	chr5_34906442_-	4.44477901360433e-09	0.343868927849208	.	.	.	.
SARC	CAediting_401723	chr5_34906442_-	6.17444525965415e-08	0.372229992223784	0.00529050805150615	0.196992283571214	.	.
TGCT	CAediting_401723	chr5_34906442_-	0.00045832214109718	0.376094699894087	.	.	.	.
THYM	CAediting_401723	chr5_34906442_-	0.00202695801916641	0.348618188202153	0.0083034538177528	0.300710034217942	0.00766528942475809	0.303639549852969
BRCA	CAediting_401728	chr5_34906482_-	0.00351105890344768	0.290703334573874	.	.	.	.
BRCA	CAediting_401732	chr5_34906517_-	2.2344808005142e-06	0.371728505558713	.	.	.	.
OV	CAediting_401732	chr5_34906517_-	0.0122097894698505	0.264625082525315	.	.	.	.
BLCA	CAediting_401736	chr5_34906553_-	0.00236972209339121	0.184246638969912	.	.	.	.
LGG	CAediting_401736	chr5_34906553_-	.	.	.	.	0.0387015845952826	0.0947924094297816
BRCA	CAediting_401736	chr5_34906553_-	9.70991964058513e-14	0.245513854966182	.	.	.	.
LIHC	CAediting_401736	chr5_34906553_-	0.0115239975907842	0.298263800088665	.	.	.	.
CESC	CAediting_401736	chr5_34906553_-	0.0169884193833846	0.149371450467718	.	.	.	.
LUAD	CAediting_401736	chr5_34906553_-	0.00519531407340731	0.145009815102107	.	.	.	.
COAD	CAediting_401736	chr5_34906553_-	0.00279066131829683	0.218638108774475	.	.	.	.
LUSC	CAediting_401736	chr5_34906553_-	1.21182422045939e-06	0.236163777926334	.	.	.	.
GBM	CAediting_401736	chr5_34906553_-	0.000324842300636052	0.286830813733801	.	.	.	.
PRAD	CAediting_401736	chr5_34906553_-	0.00269748668469499	0.152903501067699	.	.	.	.
HNSC	CAediting_401736	chr5_34906553_-	0.0444250147379292	0.117323630183925	.	.	.	.
STAD	CAediting_401736	chr5_34906553_-	0.0207460185432244	0.185635606901676	.	.	.	.
THCA	CAediting_401736	chr5_34906553_-	0.000360171951361267	0.173282129242417	.	.	.	.
UCEC	CAediting_401736	chr5_34906553_-	0.00909997941772002	0.25221894590305	.	.	.	.
KIRP	CAediting_401736	chr5_34906553_-	0.000774947290692745	0.293435290447385	.	.	.	.
ACC	CAediting_401736	chr5_34906553_-	0.0201000206222614	0.312709313817117	.	.	.	.
OV	CAediting_401736	chr5_34906553_-	2.37418127707569e-05	0.287863221070448	.	.	.	.
PAAD	CAediting_401736	chr5_34906553_-	0.03303192457651	0.241678507605497	.	.	.	.
PCPG	CAediting_401736	chr5_34906553_-	0.00032457154674309	0.345746958434862	.	.	.	.
SKCM	CAediting_401736	chr5_34906553_-	9.37035927385588e-09	0.312185236993857	.	.	.	.
SARC	CAediting_401736	chr5_34906553_-	4.93109514659873e-05	0.273743497734964	.	.	.	.
THYM	CAediting_401736	chr5_34906553_-	.	.	.	.	0.000151832874687772	0.413536296889313
BLCA	CAediting_401737	chr5_34906556_-	1.04548678881114e-05	0.281961274431719	0.0448684839376351	0.130428733910442	.	.
LGG	CAediting_401737	chr5_34906556_-	0.00416749040116453	0.1368078520386	0.00711083242554537	0.128590453156481	.	.
BRCA	CAediting_401737	chr5_34906556_-	2.16725507594055e-27	0.355039373864991	.	.	.	.
CESC	CAediting_401737	chr5_34906556_-	0.00105776873496722	0.20756545516699	.	.	.	.
LUAD	CAediting_401737	chr5_34906556_-	1.84016260921558e-09	0.314265889425501	.	.	.	.
COAD	CAediting_401737	chr5_34906556_-	0.00458964734723355	0.22370013148572	0.0142902702600117	0.193969875868134	.	.
LUSC	CAediting_401737	chr5_34906556_-	0.000200060310463547	0.185840757283927	.	.	.	.
PRAD	CAediting_401737	chr5_34906556_-	0.00259541932696808	0.162146492151553	.	.	.	.
HNSC	CAediting_401737	chr5_34906556_-	0.00520727790797817	0.163945517423206	0.00571566052669541	0.162193523422586	.	.
THCA	CAediting_401737	chr5_34906556_-	0.00238356773326639	0.154390486290518	.	.	.	.
ACC	CAediting_401737	chr5_34906556_-	0.0282973847468708	0.301394295738554	.	.	.	.
OV	CAediting_401737	chr5_34906556_-	0.000153476759437276	0.267161544883764	.	.	.	.
PCPG	CAediting_401737	chr5_34906556_-	0.0296713623367405	0.225615535574023	.	.	.	.
SKCM	CAediting_401737	chr5_34906556_-	4.13948868649226e-05	0.231726664959734	.	.	.	.
SARC	CAediting_401737	chr5_34906556_-	6.31807260507525e-06	0.311690187518166	.	.	.	.
TGCT	CAediting_401737	chr5_34906556_-	0.00922584725577067	0.289385691556579	.	.	.	.
THYM	CAediting_401737	chr5_34906556_-	0.0028799392703391	0.337368845148441	.	.	.	.
BLCA	CAediting_401738	chr5_34906557_-	0.00154983423391196	0.229290809056076	.	.	.	.
BRCA	CAediting_401738	chr5_34906557_-	4.76096818901914e-09	0.211454294415489	.	.	.	.
LUAD	CAediting_401738	chr5_34906557_-	5.35533344642107e-07	0.288352816839973	.	.	.	.
COAD	CAediting_401738	chr5_34906557_-	0.00042918731839273	0.340695904866715	0.0286049227602816	0.215763651783528	.	.
LUSC	CAediting_401738	chr5_34906557_-	0.00201907859554733	0.167860972211808	.	.	.	.
HNSC	CAediting_401738	chr5_34906557_-	0.0215977427995741	0.15013543057089	0.000372525144506943	0.230735815120347	.	.
THCA	CAediting_401738	chr5_34906557_-	.	.	.	.	0.0357523648399132	0.12189817098772
ACC	CAediting_401738	chr5_34906557_-	0.00909899573338686	0.365267546272745	.	.	.	.
SKCM	CAediting_401738	chr5_34906557_-	0.0053131990301769	0.179773498993006	.	.	.	.
SARC	CAediting_401738	chr5_34906557_-	0.00231586037762161	0.234210215998658	.	.	.	.
TGCT	CAediting_401738	chr5_34906557_-	0.000686303249404479	0.44019965935008	.	.	.	.
BRCA	CAediting_401742	chr5_34906587_-	2.2243004077154e-08	0.287561035320726	.	.	.	.
GBM	CAediting_401742	chr5_34906587_-	0.0158175806723947	0.312919879274057	.	.	.	.
HNSC	CAediting_401742	chr5_34906587_-	0.0194131188278862	0.326387438745454	.	.	.	.
SARC	CAediting_401742	chr5_34906587_-	0.000521577648291281	0.445122602365578	.	.	.	.
BRCA	CAediting_401744	chr5_34906595_-	0.00215196359710174	0.12630105164462	.	.	.	.
GBM	CAediting_401744	chr5_34906595_-	0.00842331306811211	0.273167214304269	.	.	.	.
HNSC	CAediting_401744	chr5_34906595_-	0.0320198017354107	0.19670680748797	0.00145789740150003	0.288591292126687	.	.
OV	CAediting_401744	chr5_34906595_-	0.0404669794023877	0.17594697290451	.	.	.	.
SKCM	CAediting_401744	chr5_34906595_-	0.0017482045880266	0.244074070565306	.	.	.	.
BRCA	CAediting_401745	chr5_34906603_-	0.00010842518047655	0.226505056279675	.	.	.	.
LUAD	CAediting_401745	chr5_34906603_-	0.0161040589783174	0.236634072664015	.	.	.	.
GBM	CAediting_401745	chr5_34906603_-	0.0233250845718627	0.311183822804985	.	.	.	.
BLCA	CAediting_401747	chr5_34906632_-	0.038083962615878	0.170096930208867	.	.	.	.
LGG	CAediting_401747	chr5_34906632_-	.	.	0.0171416563629644	0.129778589960207	0.0295808704497673	0.118537910262197
BRCA	CAediting_401747	chr5_34906632_-	0.00248337808246088	0.122584815448668	.	.	.	.
LUAD	CAediting_401747	chr5_34906632_-	0.0002642178113213	0.230623846767285	.	.	.	.
COAD	CAediting_401747	chr5_34906632_-	0.0323840237672711	0.2337120981442	.	.	.	.
HNSC	CAediting_401747	chr5_34906632_-	0.0413203684962173	0.161002162663845	.	.	.	.
ESCA	CAediting_401747	chr5_34906632_-	0.0335111218365013	0.213898675939154	.	.	.	.
LGG	CAediting_401748	chr5_34906633_-	.	.	0.0136123761998375	0.135708244859285	0.0311820920334729	0.118645538625038
BRCA	CAediting_401748	chr5_34906633_-	1.50188279348591e-06	0.196875629791089	.	.	.	.
CESC	CAediting_401748	chr5_34906633_-	.	.	.	.	0.0369285366157443	0.152711713035769
LUAD	CAediting_401748	chr5_34906633_-	0.00531165581084253	0.180911679053898	.	.	.	.
LUSC	CAediting_401748	chr5_34906633_-	0.0351103691032847	0.119727158515791	.	.	.	.
GBM	CAediting_401748	chr5_34906633_-	0.0310466363815317	0.202110483319356	.	.	.	.
PRAD	CAediting_401748	chr5_34906633_-	.	.	0.00783781112867694	0.17161680996599	.	.
HNSC	CAediting_401748	chr5_34906633_-	.	.	0.0127116069015493	0.206480617256496	.	.
ESCA	CAediting_401748	chr5_34906633_-	0.00433672336900756	0.290183744563423	.	.	.	.
BLCA	CAediting_401751	chr5_34906645_-	0.0013982669575464	0.262037060140846	.	.	.	.
LGG	CAediting_401751	chr5_34906645_-	4.73542411389338e-05	0.227123857014133	.	.	.	.
BRCA	CAediting_401751	chr5_34906645_-	6.79681136567167e-33	0.43267183217088	.	.	.	.
CESC	CAediting_401751	chr5_34906645_-	0.000164141956244884	0.289288775318295	.	.	.	.
LUAD	CAediting_401751	chr5_34906645_-	1.7868233702461e-10	0.364443700512054	.	.	.	.
LUSC	CAediting_401751	chr5_34906645_-	4.79161621217468e-07	0.290974152472905	.	.	.	.
GBM	CAediting_401751	chr5_34906645_-	0.000437276078494566	0.393489178456376	.	.	.	.
PRAD	CAediting_401751	chr5_34906645_-	0.00159715228752644	0.199026891500927	.	.	.	.
STAD	CAediting_401751	chr5_34906645_-	0.0087035055449231	0.253641563637164	.	.	.	.
THCA	CAediting_401751	chr5_34906645_-	0.00421602986300095	0.161584838806768	.	.	.	.
KIRC	CAediting_401751	chr5_34906645_-	0.000166318988781064	0.249001723193905	.	.	.	.
UCEC	CAediting_401751	chr5_34906645_-	3.64677406805665e-05	0.549045350466938	.	.	.	.
OV	CAediting_401751	chr5_34906645_-	0.00653628073094737	0.218280148292356	.	.	.	.
SKCM	CAediting_401751	chr5_34906645_-	2.81929539346663e-07	0.34861588586511	.	.	.	.
SARC	CAediting_401751	chr5_34906645_-	1.1058566257879e-08	0.42899705542064	.	.	.	.
STAD	CAediting_401762	chr5_34908270_-	.	.	0.0160529650494039	0.209229217792998	.	.
SKCM	CAediting_401762	chr5_34908270_-	.	.	.	.	0.0457709986337626	0.256760137936523

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Relation with cancer stages for RAD1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_401670	chr5_34906057_-	0.00220517268083542	0.199591813353666
BLCA	pathologic_stage	CAediting_401705	chr5_34906229_-	0.0365239329633941	0.144057584272115
BLCA	pathologic_stage	CAediting_401736	chr5_34906553_-	0.0287737728613707	0.133591340974779
BLCA	pathologic_stage	CAediting_401745	chr5_34906603_-	0.029166670502188	0.311838140890142
BLCA	pathologic_stage	CAediting_401747	chr5_34906632_-	0.00436016694229239	0.233078760229832
BLCA	pathologic_stage	CAediting_401748	chr5_34906633_-	0.00751032279089141	0.221165633751432
BRCA	pathologic_stage	CAediting_401688	chr5_34906132_-	0.0278796383151204	0.30215867228029
BRCA	pathologic_stage	CAediting_401712	chr5_34906382_-	0.0379277494445884	0.102676381944503
BRCA	pathologic_stage	CAediting_401729	chr5_34906490_-	0.0493168183233003	0.22482881420449
BRCA	pathologic_stage	CAediting_401732	chr5_34906517_-	0.0205301378914579	0.190286583103061
BRCA	pathologic_stage	CAediting_401737	chr5_34906556_-	0.0461963204513847	0.0681600217975753
CESC	clinical_stage	CAediting_401668	chr5_34906051_-	0.00823290842514608	-0.210202010322591
CESC	clinical_stage	CAediting_401670	chr5_34906057_-	0.0122104350009942	-0.162557718192793
CESC	clinical_stage	CAediting_401705	chr5_34906229_-	0.00960835681338169	-0.172690147927096
CESC	clinical_stage	CAediting_401706	chr5_34906230_-	0.00619306123281355	-0.181578564111189
CESC	clinical_stage	CAediting_401736	chr5_34906553_-	0.00138327210535824	-0.201601973726317
CESC	clinical_stage	CAediting_401744	chr5_34906595_-	0.032918223684762	-0.18372891159297
COAD	pathologic_stage	CAediting_401723	chr5_34906442_-	0.0459231707353091	-0.171476851845968
COAD	pathologic_stage	CAediting_401747	chr5_34906632_-	0.00718959762219562	0.294732687332715
ESCA	clinical_stage	CAediting_401670	chr5_34906057_-	0.00622694882414164	-0.466353752856984
ESCA	clinical_stage	CAediting_401744	chr5_34906595_-	0.00277423289110167	-0.572657011194108
ESCA	pathologic_stage	CAediting_401712	chr5_34906382_-	0.0211526164969742	0.264093699285458
ESCA	pathologic_stage	CAediting_401747	chr5_34906632_-	0.045989047293946	0.215794891969668
HNSC	clinical_stage	CAediting_401718	chr5_34906421_-	0.0367517494154885	-0.243265909424052
HNSC	clinical_stage	CAediting_401736	chr5_34906553_-	0.0367487334115671	0.123135466874479
HNSC	pathologic_stage	CAediting_401706	chr5_34906230_-	0.0424137880390077	0.143658121245405
HNSC	pathologic_stage	CAediting_401712	chr5_34906382_-	0.0430708509979248	0.271362314872866
HNSC	pathologic_stage	CAediting_401723	chr5_34906442_-	0.00227090530941102	0.215187255701457
HNSC	pathologic_stage	CAediting_401736	chr5_34906553_-	0.00201124099796146	0.193678803773192
HNSC	pathologic_stage	CAediting_401751	chr5_34906645_-	0.0413304625988286	0.189758038312612
KIRC	pathologic_stage	CAediting_401670	chr5_34906057_-	0.000803930632910299	0.226382327820428
KIRC	pathologic_stage	CAediting_401736	chr5_34906553_-	0.0152911750027661	0.127927929073766
KIRC	pathologic_stage	CAediting_401748	chr5_34906633_-	0.0336230107461837	0.181004664782795
KIRP	clinical_stage	CAediting_401670	chr5_34906057_-	0.0382364708181697	0.244779424894501
KIRP	pathologic_stage	CAediting_401670	chr5_34906057_-	0.0314379516237297	0.219771728535015
KIRP	pathologic_stage	CAediting_401736	chr5_34906553_-	0.00778945579406197	0.243856771450207
LUAD	pathologic_stage	CAediting_401745	chr5_34906603_-	0.0228901020211458	0.227395892807474
LUSC	pathologic_stage	CAediting_401668	chr5_34906051_-	0.000198832417636237	0.21680714261383
LUSC	pathologic_stage	CAediting_401669	chr5_34906052_-	0.00107044969245486	0.211209780364382
LUSC	pathologic_stage	CAediting_401670	chr5_34906057_-	9.43096223214099e-05	0.197428938289962
LUSC	pathologic_stage	CAediting_401706	chr5_34906230_-	0.0319257780949438	0.11201523243553
LUSC	pathologic_stage	CAediting_401736	chr5_34906553_-	0.00184652491996352	0.153155072870418
LUSC	pathologic_stage	CAediting_401744	chr5_34906595_-	0.00752179011228574	0.165414487799324
LUSC	pathologic_stage	CAediting_401747	chr5_34906632_-	0.0145472706146537	0.137783526168669
LUSC	pathologic_stage	CAediting_401748	chr5_34906633_-	0.00165676858433391	0.178527974036046
OV	clinical_stage	CAediting_401704	chr5_34906224_-	0.0333280818675446	0.304613163675393
OV	clinical_stage	CAediting_401762	chr5_34908270_-	0.0245838392878166	0.20182754159733
PAAD	pathologic_stage	CAediting_401736	chr5_34906553_-	0.0275293505813707	0.25122718727378
PAAD	pathologic_stage	CAediting_401738	chr5_34906557_-	0.00181583984398541	0.426248020549193
SKCM	pathologic_stage	CAediting_401751	chr5_34906645_-	0.030158182076677	-0.16210675408407
TGCT	clinical_stage	CAediting_401670	chr5_34906057_-	0.00498307381299379	-0.524427931841556
TGCT	pathologic_stage	CAediting_401670	chr5_34906057_-	0.0107171084514705	-0.510990431651977
THCA	pathologic_stage	CAediting_401723	chr5_34906442_-	0.0468425952801487	0.102307745829222
THCA	pathologic_stage	CAediting_401736	chr5_34906553_-	0.00508923506059256	0.137274406721234
THCA	pathologic_stage	CAediting_401747	chr5_34906632_-	0.0470528751539342	0.126745989979614
UCEC	clinical_stage	CAediting_401668	chr5_34906051_-	0.0239706259907863	-0.29619884477492

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Relation with survival for RAD1

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
BRCA	CAediting_401717	chr5_34906418_-	0.0341324190072879	0.0115036	2.90049e-15
BRCA	CAediting_401747	chr5_34906632_-	0.0164116710919056	0.0295563	5.60355
CESC	CAediting_401669	chr5_34906052_-	0.0191519614396585	0.00651438	0.000552225

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RelatedDrugs for RAD1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for RAD1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene