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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: MIER1 (CAeditome ID:57708)

Gene summary for MIER1

check button Gene summary
Gene informationGene symbol

MIER1

Gene ID

57708

Gene nameMIER1 transcriptional regulator
SynonymsER1|MI-ER1
Cytomap

1p31.3

Type of geneprotein-coding
Descriptionmesoderm induction early response protein 1mesoderm induction early response 1 homologmesoderm induction early response 1, transcriptional regulator
Modification date20210518
UniProtAcc

Q8N108

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
MIER1

GO:0004407

Mesoderm induction early response protein 1

28046085

MIER1

GO:0016575

Mesoderm induction early response protein 1

28046085

MIER1

GO:0031937

Mesoderm induction early response protein 1

12482978

MIER1

GO:0005634

Mesoderm induction early response protein 1

28046085

MIER1

GO:0005654

Mesoderm induction early response protein 1

0000052

MIER1

GO:0017053

Mesoderm induction early response protein 1

12482978

MIER1

GO:0032991

Mesoderm induction early response protein 1

28046085


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RNA A-to-I events for MIER1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000198160.13
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_73034(66936297, +), CAediting_73035(66936302, +), CAediting_73036(66936303, +), CAediting_73037(66936323, +), CAediting_73038(66936337, +), CAediting_73039(66936345, +), CAediting_73040(66936346, +), CAediting_73041(66936349, +), CAediting_73042(66936359, +), CAediting_73043(66936413, +), CAediting_73044(66936416, +), CAediting_73045(66936442, +), CAediting_73046(66936466, +), CAediting_73047(66936494, +), CAediting_73048(66936501, +), CAediting_73049(66936507, +), CAediting_73050(66936737, +), CAediting_73051(66936739, +), CAediting_73052(66936745, +), CAediting_73053(66936746, +), CAediting_73054(66936751, +), CAediting_73055(66936754, +), CAediting_73056(66936784, +), CAediting_73057(66936789, +), CAediting_73058(66936792, +), CAediting_73059(66936812, +), CAediting_73060(66936824, +), CAediting_73061(66936878, +), CAediting_73062(66936901, +), CAediting_73063(66936919, +), CAediting_73064(66936920, +), CAediting_73065(66936924, +), CAediting_73066(66936927, +), CAediting_73067(66936944, +), CAediting_73068(66936949, +), CAediting_73069(66936959, +), CAediting_73070(66937330, +), CAediting_73071(66937331, +), CAediting_73072(66937339, +), CAediting_73073(66937348, +), CAediting_73074(66937353, +), CAediting_73075(66937354, +), CAediting_73076(66937355, +), CAediting_73077(66937372, +), CAediting_73078(66937377, +), CAediting_73079(66937400, +), CAediting_73080(66937464, +), CAediting_73081(66937465, +), CAediting_73082(66937470, +), CAediting_73083(66937505, +), CAediting_73084(66937506, +), CAediting_73085(66937511, +), CAediting_73086(66937513, +), CAediting_73087(66937530, +), CAediting_73088(66937535, +), CAediting_73089(66937594, +), CAediting_73090(66937595, +), CAediting_73091(66937596, +), CAediting_73092(66941715, +), CAediting_73093(66941855, +), CAediting_73094(66943605, +), CAediting_73095(66943629, +), CAediting_73096(66943682, +), CAediting_73097(66944777, +), CAediting_73098(66944784, +), CAediting_73099(66944891, +), CAediting_73100(66944909, +), CAediting_73101(66944911, +), CAediting_73102(66944935, +), CAediting_73103(66944946, +), CAediting_73104(66945002, +), CAediting_73105(66945702, +), CAediting_73106(66948691, +), CAediting_73107(66951389, +), CAediting_73108(66951665, +), CAediting_73109(66954762, +), CAediting_73110(66954768, +), CAediting_73111(66954848, +), CAediting_73112(66956184, +), CAediting_73113(66956188, +), CAediting_73114(66956261, +), CAediting_73115(66956263, +), CAediting_73116(66956298, +), CAediting_73117(66956300, +), CAediting_73118(66956306, +), CAediting_73119(66956369, +), CAediting_73120(66962568, +), CAediting_73121(66964258, +), CAediting_73122(66964553, +), CAediting_73123(66964556, +), CAediting_73124(66964578, +), CAediting_73125(66964579, +), CAediting_73126(66964586, +), CAediting_73127(66969291, +), CAediting_73128(66969359, +), CAediting_73129(66969402, +), CAediting_73130(66969414, +), CAediting_73131(66969494, +), CAediting_73132(66969533, +), CAediting_73133(66970945, +), CAediting_73134(66975326, +), CAediting_73135(66975329, +), CAediting_73136(66975336, +), CAediting_73137(66975348, +), CAediting_73138(66975349, +), CAediting_73139(66975350, +), CAediting_73140(66975351, +), CAediting_73141(66975362, +), CAediting_73142(66975366, +), CAediting_73143(66975367, +), CAediting_73144(66975368, +), CAediting_73145(66975369, +), CAediting_73146(66975371, +), CAediting_73147(66975376, +), CAediting_73148(66975377, +), CAediting_73149(66975380, +), CAediting_73150(66975396, +), CAediting_73151(66975412, +), CAediting_73152(66975416, +), CAediting_73153(66975420, +), CAediting_73154(66975429, +), CAediting_73155(66975433, +), CAediting_73156(66975447, +), CAediting_73157(66975486, +), CAediting_73158(66975535, +), CAediting_73159(66975543, +), CAediting_73160(66975545, +), CAediting_73161(66976184, +), CAediting_73162(66976213, +), CAediting_73163(66977179, +), CAediting_73164(66977209, +), CAediting_73165(66977210, +), CAediting_73166(66977372, +), CAediting_73167(66977384, +), CAediting_73168(66977921, +), CAediting_73169(66978020, +), CAediting_73170(66978121, +), CAediting_73171(66985112, +), CAediting_73172(66985116, +), CAediting_73173(66985166, +), CAediting_73174(66986135, +),

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RNA editing positional annotations for MIER1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_73133chr1_66970945_+nonsynonymous SNVENST00000355356.3c.A751Gp.K251ED.D
CAediting_73133chr1_66970945_+nonsynonymous SNVENST00000355977.9c.A562Gp.K188ED.D
CAediting_73133chr1_66970945_+nonsynonymous SNVENST00000357692.5c.A802Gp.K268ED.D
CAediting_73133chr1_66970945_+nonsynonymous SNVENST00000371014.4c.A910Gp.K304ED.D
CAediting_73133chr1_66970945_+nonsynonymous SNVENST00000371016.4c.A802Gp.K268ED.D
CAediting_73133chr1_66970945_+nonsynonymous SNVENST00000371018.6c.A802Gp.K268ED.D
CAediting_73133chr1_66970945_+nonsynonymous SNVENST00000401041.4c.A910Gp.K304ED.D
CAediting_73133chr1_66970945_+nonsynonymous SNVENST00000401042.6c.A751Gp.K251ED.D

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_73034chr1_66936297_+ncRNA_intronic
CAediting_73035chr1_66936302_+ncRNA_intronic
CAediting_73036chr1_66936303_+ncRNA_intronic
CAediting_73037chr1_66936323_+ncRNA_intronic
CAediting_73038chr1_66936337_+ncRNA_intronic
CAediting_73039chr1_66936345_+ncRNA_intronic
CAediting_73040chr1_66936346_+ncRNA_intronic
CAediting_73041chr1_66936349_+ncRNA_intronic
CAediting_73042chr1_66936359_+ncRNA_intronic
CAediting_73043chr1_66936413_+ncRNA_intronic
CAediting_73044chr1_66936416_+ncRNA_intronic
CAediting_73045chr1_66936442_+ncRNA_intronic
CAediting_73046chr1_66936466_+ncRNA_intronic
CAediting_73047chr1_66936494_+ncRNA_intronic
CAediting_73048chr1_66936501_+ncRNA_intronic
CAediting_73049chr1_66936507_+ncRNA_intronic
CAediting_73050chr1_66936737_+ncRNA_intronic
CAediting_73051chr1_66936739_+ncRNA_intronic
CAediting_73052chr1_66936745_+ncRNA_intronic
CAediting_73053chr1_66936746_+ncRNA_intronic
CAediting_73054chr1_66936751_+ncRNA_intronic
CAediting_73055chr1_66936754_+ncRNA_intronic
CAediting_73056chr1_66936784_+ncRNA_intronic
CAediting_73057chr1_66936789_+ncRNA_intronic
CAediting_73058chr1_66936792_+ncRNA_intronic
CAediting_73059chr1_66936812_+ncRNA_intronic
CAediting_73060chr1_66936824_+ncRNA_intronic
CAediting_73061chr1_66936878_+ncRNA_intronic
CAediting_73062chr1_66936901_+ncRNA_intronic
CAediting_73063chr1_66936919_+ncRNA_intronic
CAediting_73064chr1_66936920_+ncRNA_intronic
CAediting_73065chr1_66936924_+ncRNA_intronic
CAediting_73066chr1_66936927_+ncRNA_intronic
CAediting_73067chr1_66936944_+ncRNA_intronic
CAediting_73068chr1_66936949_+ncRNA_intronic
CAediting_73069chr1_66936959_+ncRNA_intronic
CAediting_73070chr1_66937330_+ncRNA_intronic
CAediting_73071chr1_66937331_+ncRNA_intronic
CAediting_73072chr1_66937339_+ncRNA_intronic
CAediting_73073chr1_66937348_+ncRNA_intronic
CAediting_73074chr1_66937353_+ncRNA_intronic
CAediting_73075chr1_66937354_+ncRNA_intronic
CAediting_73076chr1_66937355_+ncRNA_intronic
CAediting_73077chr1_66937372_+ncRNA_intronic
CAediting_73078chr1_66937377_+ncRNA_intronic
CAediting_73079chr1_66937400_+ncRNA_intronic
CAediting_73080chr1_66937464_+ncRNA_intronic
CAediting_73081chr1_66937465_+ncRNA_intronic
CAediting_73082chr1_66937470_+ncRNA_intronic
CAediting_73083chr1_66937505_+ncRNA_intronic
CAediting_73084chr1_66937506_+ncRNA_intronic
CAediting_73085chr1_66937511_+ncRNA_intronic
CAediting_73086chr1_66937513_+ncRNA_intronic
CAediting_73087chr1_66937530_+ncRNA_intronic
CAediting_73088chr1_66937535_+ncRNA_intronic
CAediting_73089chr1_66937594_+ncRNA_intronic
CAediting_73090chr1_66937595_+ncRNA_intronic
CAediting_73091chr1_66937596_+ncRNA_intronic
CAediting_73092chr1_66941715_+ncRNA_intronic
CAediting_73093chr1_66941855_+ncRNA_intronic
CAediting_73094chr1_66943605_+ncRNA_intronic
CAediting_73095chr1_66943629_+ncRNA_intronic
CAediting_73096chr1_66943682_+ncRNA_intronic
CAediting_73097chr1_66944777_+ncRNA_intronic
CAediting_73098chr1_66944784_+ncRNA_intronic
CAediting_73099chr1_66944891_+ncRNA_intronic
CAediting_73100chr1_66944909_+ncRNA_intronic
CAediting_73101chr1_66944911_+ncRNA_intronic
CAediting_73102chr1_66944935_+ncRNA_intronic
CAediting_73103chr1_66944946_+ncRNA_intronic
CAediting_73104chr1_66945002_+ncRNA_intronic
CAediting_73105chr1_66945702_+ncRNA_intronic
CAediting_73106chr1_66948691_+ncRNA_intronic
CAediting_73107chr1_66951389_+ncRNA_intronic
CAediting_73108chr1_66951665_+ncRNA_intronic
CAediting_73109chr1_66954762_+ncRNA_intronic
CAediting_73110chr1_66954768_+ncRNA_intronic
CAediting_73111chr1_66954848_+ncRNA_intronic
CAediting_73112chr1_66956184_+ncRNA_intronic
CAediting_73113chr1_66956188_+ncRNA_intronic
CAediting_73114chr1_66956261_+ncRNA_intronic
CAediting_73115chr1_66956263_+ncRNA_intronic
CAediting_73116chr1_66956298_+ncRNA_intronic
CAediting_73117chr1_66956300_+ncRNA_intronic
CAediting_73118chr1_66956306_+ncRNA_intronic
CAediting_73119chr1_66956369_+ncRNA_intronic
CAediting_73120chr1_66962568_+intronic
CAediting_73121chr1_66964258_+intronic
CAediting_73122chr1_66964553_+intronic
CAediting_73123chr1_66964556_+intronic
CAediting_73124chr1_66964578_+intronic
CAediting_73125chr1_66964579_+intronic
CAediting_73126chr1_66964586_+intronic
CAediting_73127chr1_66969291_+intronic
CAediting_73128chr1_66969359_+intronic
CAediting_73129chr1_66969402_+intronic
CAediting_73130chr1_66969414_+intronic
CAediting_73131chr1_66969494_+intronic
CAediting_73132chr1_66969533_+intronic
CAediting_73133chr1_66970945_+exonic
CAediting_73134chr1_66975326_+intronic
CAediting_73135chr1_66975329_+intronic
CAediting_73136chr1_66975336_+intronic
CAediting_73137chr1_66975348_+intronic
CAediting_73138chr1_66975349_+intronic
CAediting_73139chr1_66975350_+intronic
CAediting_73140chr1_66975351_+intronic
CAediting_73141chr1_66975362_+intronic
CAediting_73142chr1_66975366_+intronic
CAediting_73143chr1_66975367_+intronic
CAediting_73144chr1_66975368_+intronic
CAediting_73145chr1_66975369_+intronic
CAediting_73146chr1_66975371_+intronic
CAediting_73147chr1_66975376_+intronic
CAediting_73148chr1_66975377_+intronic
CAediting_73149chr1_66975380_+intronic
CAediting_73150chr1_66975396_+intronic
CAediting_73151chr1_66975412_+intronic
CAediting_73152chr1_66975416_+intronic
CAediting_73153chr1_66975420_+intronic
CAediting_73154chr1_66975429_+intronic
CAediting_73155chr1_66975433_+intronic
CAediting_73156chr1_66975447_+intronic
CAediting_73157chr1_66975486_+intronic
CAediting_73158chr1_66975535_+intronic
CAediting_73159chr1_66975543_+intronic
CAediting_73160chr1_66975545_+intronic
CAediting_73161chr1_66976184_+intronic
CAediting_73162chr1_66976213_+intronic
CAediting_73163chr1_66977179_+intronic
CAediting_73164chr1_66977209_+intronic
CAediting_73165chr1_66977210_+intronic
CAediting_73166chr1_66977372_+intronic
CAediting_73167chr1_66977384_+intronic
CAediting_73168chr1_66977921_+intronic
CAediting_73169chr1_66978020_+intronic
CAediting_73170chr1_66978121_+intronic
CAediting_73171chr1_66985112_+UTR3
CAediting_73172chr1_66985116_+UTR3
CAediting_73173chr1_66985166_+UTR3
CAediting_73174chr1_66986135_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_73034chr1_66936297_+SINEAluAluSx1
CAediting_73035chr1_66936302_+SINEAluAluSx1
CAediting_73036chr1_66936303_+SINEAluAluSx1
CAediting_73037chr1_66936323_+SINEAluAluSx1
CAediting_73038chr1_66936337_+SINEAluAluSx1
CAediting_73039chr1_66936345_+SINEAluAluSx1
CAediting_73040chr1_66936346_+SINEAluAluSx1
CAediting_73041chr1_66936349_+SINEAluAluSx1
CAediting_73042chr1_66936359_+SINEAluAluSx1
CAediting_73043chr1_66936413_+SINEAluAluSx1
CAediting_73044chr1_66936416_+SINEAluAluSx1
CAediting_73045chr1_66936442_+SINEAluAluSx1
CAediting_73046chr1_66936466_+SINEAluAluSx1
CAediting_73047chr1_66936494_+SINEAluAluSx1
CAediting_73048chr1_66936501_+SINEAluAluSx1
CAediting_73049chr1_66936507_+SINEAluAluSx1
CAediting_73050chr1_66936737_+SINEAluAluSx3
CAediting_73051chr1_66936739_+SINEAluAluSx3
CAediting_73052chr1_66936745_+SINEAluAluSx3
CAediting_73053chr1_66936746_+SINEAluAluSx3
CAediting_73054chr1_66936751_+SINEAluAluSx3
CAediting_73055chr1_66936754_+SINEAluAluSx3
CAediting_73056chr1_66936784_+SINEAluAluSx3
CAediting_73057chr1_66936789_+SINEAluAluSx3
CAediting_73058chr1_66936792_+SINEAluAluSx3
CAediting_73059chr1_66936812_+SINEAluAluSx3
CAediting_73060chr1_66936824_+SINEAluAluSx3
CAediting_73061chr1_66936878_+SINEAluAluSx3
CAediting_73062chr1_66936901_+SINEAluAluSx3
CAediting_73063chr1_66936919_+SINEAluAluSx3
CAediting_73064chr1_66936920_+SINEAluAluSx3
CAediting_73065chr1_66936924_+SINEAluAluSx3
CAediting_73066chr1_66936927_+SINEAluAluSx3
CAediting_73067chr1_66936944_+SINEAluAluSx3
CAediting_73068chr1_66936949_+SINEAluAluSx3
CAediting_73069chr1_66936959_+SINEAluAluSx3
CAediting_73070chr1_66937330_+SINEAluAluSz
CAediting_73071chr1_66937331_+SINEAluAluSz
CAediting_73072chr1_66937339_+SINEAluAluSz
CAediting_73073chr1_66937348_+SINEAluAluSz
CAediting_73074chr1_66937353_+SINEAluAluSz
CAediting_73075chr1_66937354_+SINEAluAluSz
CAediting_73076chr1_66937355_+SINEAluAluSz
CAediting_73077chr1_66937372_+SINEAluAluSz
CAediting_73078chr1_66937377_+SINEAluAluSz
CAediting_73079chr1_66937400_+SINEAluAluSz
CAediting_73080chr1_66937464_+SINEAluAluSz
CAediting_73081chr1_66937465_+SINEAluAluSz
CAediting_73082chr1_66937470_+SINEAluAluSz
CAediting_73083chr1_66937505_+SINEAluAluSz
CAediting_73084chr1_66937506_+SINEAluAluSz
CAediting_73085chr1_66937511_+SINEAluAluSz
CAediting_73086chr1_66937513_+SINEAluAluSz
CAediting_73087chr1_66937530_+SINEAluAluSz
CAediting_73088chr1_66937535_+SINEAluAluSz
CAediting_73089chr1_66937594_+SINEAluAluSz
CAediting_73090chr1_66937595_+SINEAluAluSz
CAediting_73091chr1_66937596_+SINEAluAluSz
CAediting_73092chr1_66941715_+SINEAluAluSz
CAediting_73093chr1_66941855_+SINEAluAluSz
CAediting_73094chr1_66943605_+SINEAluFLAM_C
CAediting_73095chr1_66943629_+SINEAluFLAM_C
CAediting_73096chr1_66943682_+SINEAluFLAM_C
CAediting_73097chr1_66944777_+SINEAluAluJb
CAediting_73098chr1_66944784_+SINEAluAluJb
CAediting_73099chr1_66944891_+SINEAluAluJb
CAediting_73100chr1_66944909_+SINEAluAluJb
CAediting_73101chr1_66944911_+SINEAluAluJb
CAediting_73102chr1_66944935_+SINEAluAluJb
CAediting_73103chr1_66944946_+SINEAluAluJb
CAediting_73104chr1_66945002_+SINEAluAluJb
CAediting_73105chr1_66945702_+SINEAluAluJo
CAediting_73106chr1_66948691_+SINEAluAluJr
CAediting_73107chr1_66951389_+SINEAluAluJo
CAediting_73108chr1_66951665_+SINEAluAluJo
CAediting_73109chr1_66954762_+SINEAluAluSz6
CAediting_73110chr1_66954768_+SINEAluAluSz6
CAediting_73111chr1_66954848_+SINEAluAluSz6
CAediting_73112chr1_66956184_+SINEAluAluJb
CAediting_73113chr1_66956188_+SINEAluAluJb
CAediting_73114chr1_66956261_+SINEAluAluJb
CAediting_73115chr1_66956263_+SINEAluAluJb
CAediting_73116chr1_66956298_+SINEAluAluJb
CAediting_73117chr1_66956300_+SINEAluAluJb
CAediting_73118chr1_66956306_+SINEAluAluJb
CAediting_73119chr1_66956369_+SINEAluAluJb
CAediting_73120chr1_66962568_+SINEAluAluJb
CAediting_73121chr1_66964258_+SINEAluAluSq2
CAediting_73122chr1_66964553_+SINEAluAluSp
CAediting_73123chr1_66964556_+SINEAluAluSp
CAediting_73124chr1_66964578_+SINEAluAluSp
CAediting_73125chr1_66964579_+SINEAluAluSp
CAediting_73126chr1_66964586_+SINEAluAluSp
CAediting_73127chr1_66969291_+SINEAluAluSc8
CAediting_73128chr1_66969359_+SINEAluAluSc8
CAediting_73129chr1_66969402_+SINEAluAluSc8
CAediting_73130chr1_66969414_+SINEAluAluSc8
CAediting_73131chr1_66969494_+SINEAluAluSc8
CAediting_73132chr1_66969533_+SINEAluAluSc8
CAediting_73134chr1_66975326_+SINEAluAluJb
CAediting_73135chr1_66975329_+SINEAluAluJb
CAediting_73136chr1_66975336_+SINEAluAluJb
CAediting_73137chr1_66975348_+SINEAluAluJb
CAediting_73138chr1_66975349_+SINEAluAluJb
CAediting_73139chr1_66975350_+SINEAluAluJb
CAediting_73140chr1_66975351_+SINEAluAluJb
CAediting_73141chr1_66975362_+SINEAluAluJb
CAediting_73142chr1_66975366_+SINEAluAluJb
CAediting_73143chr1_66975367_+SINEAluAluJb
CAediting_73144chr1_66975368_+SINEAluAluJb
CAediting_73145chr1_66975369_+SINEAluAluJb
CAediting_73146chr1_66975371_+SINEAluAluJb
CAediting_73147chr1_66975376_+SINEAluAluJb
CAediting_73148chr1_66975377_+SINEAluAluJb
CAediting_73149chr1_66975380_+SINEAluAluJb
CAediting_73150chr1_66975396_+SINEAluAluJb
CAediting_73151chr1_66975412_+SINEAluAluJb
CAediting_73152chr1_66975416_+SINEAluAluJb
CAediting_73153chr1_66975420_+SINEAluAluJb
CAediting_73154chr1_66975429_+SINEAluAluJb
CAediting_73155chr1_66975433_+SINEAluAluJb
CAediting_73156chr1_66975447_+SINEAluAluJb
CAediting_73157chr1_66975486_+SINEAluAluJb
CAediting_73158chr1_66975535_+SINEAluAluJb
CAediting_73159chr1_66975543_+SINEAluAluJb
CAediting_73160chr1_66975545_+SINEAluAluJb
CAediting_73161chr1_66976184_+SINEAluAluSg4
CAediting_73162chr1_66976213_+SINEAluAluSg4
CAediting_73163chr1_66977179_+SINEAluAluSx1
CAediting_73164chr1_66977209_+SINEAluAluSx1
CAediting_73165chr1_66977210_+SINEAluAluSx1
CAediting_73166chr1_66977372_+SINEAluAluSx1
CAediting_73167chr1_66977384_+SINEAluAluSx1
CAediting_73168chr1_66977921_+SINEAluAluSx4
CAediting_73169chr1_66978020_+SINEAluAluSx4
CAediting_73170chr1_66978121_+SINEAluAluSx4

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RNA A-to-I editing events in the alternative splicing sites for MIER1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000198160.13.MIER1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000198160.13.MIER1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for MIER1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for MIER1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.
all structure


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The effects of the RNA editing to the miRNA binding sites for MIER1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_73174chr1_66986135_+ENSG00000198160.13ENST00000357692hsa-miR-4639-3p66986132669861398mer-1a6698612066986139146.00-14.32
CAediting_73174chr1_66986135_+ENSG00000198160.13ENST00000357692hsa-miR-6794-3p66986133669861408mer-1a6698612166986140148.00-12.58
CAediting_73174chr1_66986135_+ENSG00000198160.13ENST00000357692hsa-miR-6873-3p66986129669861357mer-m86698611566986136143.00-12.33
CAediting_73174chr1_66986135_+ENSG00000198160.13ENST00000357692hsa-miR-7110-3p66986129669861357mer-1a6698611666986137140.00-12.73
CAediting_73174chr1_66986135_+ENSG00000198160.13ENST00000357692hsa-miR-7110-3p66986130669861367mer-m86698611666986137140.00-12.73
CAediting_73174chr1_66986135_+ENSG00000198160.13ENST00000355356hsa-miR-4639-3p66986132669861398mer-1a6698612066986139146.00-14.32
CAediting_73174chr1_66986135_+ENSG00000198160.13ENST00000355356hsa-miR-6794-3p66986133669861408mer-1a6698612166986140148.00-12.58
CAediting_73174chr1_66986135_+ENSG00000198160.13ENST00000355356hsa-miR-6873-3p66986129669861357mer-m86698611566986136143.00-12.33
CAediting_73174chr1_66986135_+ENSG00000198160.13ENST00000355356hsa-miR-7110-3p66986129669861357mer-1a6698611666986137140.00-12.73
CAediting_73174chr1_66986135_+ENSG00000198160.13ENST00000355356hsa-miR-7110-3p66986130669861367mer-m86698611666986137140.00-12.73
CAediting_73172chr1_66985116_+ENSG00000198160.13ENST00000357692hsa-miR-4762-5p66985114669851218mer-1a6698509966985121143.00-5.97
CAediting_73172chr1_66985116_+ENSG00000198160.13ENST00000355356hsa-miR-4762-5p66985114669851218mer-1a6698509966985121143.00-5.97

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_73173chr1_66985166_+ENSG00000198160.13ENST00000357692hsa-miR-450966985161669851666mer6698514066985167140-17.38
CAediting_73173chr1_66985166_+ENSG00000198160.13ENST00000357692hsa-miR-450966985161669851666mer6698514066985167140-17.38
CAediting_73173chr1_66985166_+ENSG00000198160.13ENST00000357692hsa-miR-450966985161669851666mer6698514066985167140-17.38
CAediting_73172chr1_66985116_+ENSG00000198160.13ENST00000357692hsa-miR-4699-3p66985111669851177mer-m86698510166985118141-5.43
CAediting_73171chr1_66985112_+ENSG00000198160.13ENST00000357692hsa-miR-4735-5p66985106669851127mer-m86698508966985113152-8.68
CAediting_73173chr1_66985166_+ENSG00000198160.13ENST00000357692hsa-miR-474466985160669851667mer-m86698514666985167141-9.9
CAediting_73171chr1_66985112_+ENSG00000198160.13ENST00000357692hsa-miR-477566985105669851117mer-m86698509166985112145-6.16
CAediting_73174chr1_66986135_+ENSG00000198160.13ENST00000357692hsa-miR-6809-3p66986128669861358mer-1a6698611566986135145-9.33
CAediting_73173chr1_66985166_+ENSG00000198160.13ENST00000355356hsa-miR-450966985161669851666mer6698514066985167140-17.38
CAediting_73173chr1_66985166_+ENSG00000198160.13ENST00000355356hsa-miR-450966985161669851666mer6698514066985167140-17.38
CAediting_73173chr1_66985166_+ENSG00000198160.13ENST00000355356hsa-miR-450966985161669851666mer6698514066985167140-17.38
CAediting_73172chr1_66985116_+ENSG00000198160.13ENST00000355356hsa-miR-4699-3p66985111669851177mer-m86698510166985118141-5.43
CAediting_73171chr1_66985112_+ENSG00000198160.13ENST00000355356hsa-miR-4735-5p66985106669851127mer-m86698508966985113152-8.68
CAediting_73173chr1_66985166_+ENSG00000198160.13ENST00000355356hsa-miR-474466985160669851667mer-m86698514666985167141-9.9
CAediting_73171chr1_66985112_+ENSG00000198160.13ENST00000355356hsa-miR-477566985105669851117mer-m86698509166985112145-6.16
CAediting_73174chr1_66986135_+ENSG00000198160.13ENST00000355356hsa-miR-6809-3p66986128669861358mer-1a6698611566986135145-9.33

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000198160.13ENST00000371012hsa-miR-624-3p66947439669474457mer-m86694742566947446166-22.29
CAediting_980496chr14_31014685_-ENSG00000198160.13ENST00000371012hsa-miR-624-3p66947063669470708mer-1a6694705266947070146-13.33
CAediting_688080chr9_63819626_+ENSG00000198160.13ENST00000371012hsa-miR-4477b66947745669477517mer-m86694773266947752157-11.03
CAediting_688080chr9_63819626_+ENSG00000198160.13ENST00000371012hsa-miR-4477b66947023669470308mer-1a6694700866947030150-13.79
CAediting_86358chr1_109598906_+ENSG00000198160.13ENST00000355977hsa-miR-197-5p66988388669883958mer-1a6698837366988395157-26.71
CAediting_117844chr1_162342605_+ENSG00000198160.13ENST00000355977hsa-miR-556-3p66988099669881057mer-m86698808366988106161-17.41
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000355977hsa-miR-561-3p66988462669884687mer-m86698844866988469147-9.33
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000355977hsa-miR-561-3p66987010669870167mer-m86698699466987017155-11.31
CAediting_86358chr1_109598906_+ENSG00000198160.13ENST00000371018hsa-miR-197-5p66988388669883958mer-1a6698837366988395157-26.71
CAediting_117844chr1_162342605_+ENSG00000198160.13ENST00000371018hsa-miR-556-3p66988099669881057mer-m86698808366988106161-17.41
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000371018hsa-miR-561-3p66988462669884687mer-m86698844866988469147-9.33
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000371018hsa-miR-561-3p66987010669870167mer-m86698699466987017155-11.31
CAediting_1229414chr17_67471546_+ENSG00000198160.13ENST00000357692hsa-miR-548aa66986481669864877mer-m86698646466986488158-15.38
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000357692hsa-miR-561-3p66987010669870167mer-m86698699466987017155-11.31
CAediting_524911chr7_5495852_-ENSG00000198160.13ENST00000357692hsa-miR-589-3p66986234669862407mer-m86698621966986241148-13.56
CAediting_1229413chr17_67471544_+ENSG00000198160.13ENST00000371012hsa-miR-548aa66947611669476177mer-m86694759166947618152-13.7
CAediting_86358chr1_109598906_+ENSG00000198160.13ENST00000371012hsa-miR-197-5p66947655669476628mer-1a6694763866947662156-27.03
CAediting_1229414chr17_67471546_+ENSG00000198160.13ENST00000355356hsa-miR-548aa66986481669864877mer-m86698646466986488158-15.38
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000355356hsa-miR-561-3p66987010669870167mer-m86698699466987017155-11.31
CAediting_524911chr7_5495852_-ENSG00000198160.13ENST00000355356hsa-miR-589-3p66986234669862407mer-m86698621966986241148-13.56
CAediting_468389chr6_31355314_-ENSG00000198160.13ENST00000371012hsa-miR-6891-5p66947942669479498mer-1a6694793166947949140-21.89

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000198160.13ENST00000355977hsa-miR-200b-3p66988483669884886mer6698846866988489141-15.78
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000355977hsa-miR-561-3p66986772669867787mer-m86698675766986779146-6.32
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000355977hsa-miR-561-3p66987321669873266mer6698731466987335152-13.7
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000355977hsa-miR-561-3p66987329669873346mer6698731466987335152-13.7
CAediting_393chr1_1167164_+ENSG00000198160.13ENST00000371018hsa-miR-200b-3p66988483669884886mer6698846866988489141-15.78
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000371018hsa-miR-561-3p66986772669867787mer-m86698675766986779146-6.32
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000371018hsa-miR-561-3p66987321669873266mer6698731466987335152-13.7
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000371018hsa-miR-561-3p66987329669873346mer6698731466987335152-13.7
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000357692hsa-miR-561-3p66986147669861537mer-m86698614166986163155-7.23
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000357692hsa-miR-561-3p66986156669861627mer-m86698614166986163155-7.23
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000357692hsa-miR-561-3p66986359669863657mer-m86698634666986366143-4.09
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000357692hsa-miR-561-3p66986772669867787mer-m86698675766986779146-6.32
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000357692hsa-miR-561-3p66987321669873266mer6698731466987335152-13.7
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000357692hsa-miR-561-3p66987329669873346mer6698731466987335152-13.7
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000357692hsa-miR-561-3p66985665669856717mer-m86698565166985672148-6.83
CAediting_442554chr5_154685830_+ENSG00000198160.13ENST00000371012hsa-miR-130366947340669473478mer-1a6694732666947347142-12.27
CAediting_1368054chr19_46709310_-ENSG00000198160.13ENST00000371012hsa-miR-320e66947711669477177mer-m86694769866947718150-15.86
CAediting_1229413chr17_67471544_+ENSG00000198160.13ENST00000371012hsa-miR-548aa66948102669481087mer-m86694808566948109140-5.31
CAediting_1229413chr17_67471544_+ENSG00000198160.13ENST00000371012hsa-miR-548aa66946884669468907mer-m86694686966946891148-6.22
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000371012hsa-miR-561-3p66946761669467666mer6694674366946767141-13.96
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000355356hsa-miR-561-3p66986147669861537mer-m86698614166986163155-7.23
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000355356hsa-miR-561-3p66986156669861627mer-m86698614166986163155-7.23
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000355356hsa-miR-561-3p66986359669863657mer-m86698634666986366143-4.09
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000355356hsa-miR-561-3p66986772669867787mer-m86698675766986779146-6.32
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000355356hsa-miR-561-3p66987321669873266mer6698731466987335152-13.7
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000355356hsa-miR-561-3p66987329669873346mer6698731466987335152-13.7
CAediting_228905chr2_188297554_+ENSG00000198160.13ENST00000355356hsa-miR-561-3p66985665669856717mer-m86698565166985672148-6.83

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for MIER1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000355356.3protein_codingSoverviewSoverview
ENST00000355977.9protein_codingSoverviewSoverview
ENST00000357692.5protein_codingSoverviewSoverview
ENST00000371014.4protein_codingSoverviewSoverview
ENST00000371016.4protein_codingSoverviewSoverview
ENST00000371018.6protein_codingSoverviewSoverview
ENST00000401041.4protein_codingSoverviewSoverview
ENST00000401042.6protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_73133ENST00000355356.3chr1_66970945_+-1202.60-1201.40-1203.60
CAediting_73171ENST00000355356.3chr1_66985112_+-1201.10-1201.40-1203.60
CAediting_73172ENST00000355356.3chr1_66985116_+-1201.50-1201.40-1203.60
CAediting_73173ENST00000355356.3chr1_66985166_+-1201.10-1201.40-1203.60
CAediting_73174ENST00000355356.3chr1_66986135_+-1202.20-1201.40-1203.60
CAediting_73133ENST00000355977.9chr1_66970945_+-893.07-888.20-893.07
CAediting_73133ENST00000357692.5chr1_66970945_+-1242.60-1241.40-1243.60
CAediting_73171ENST00000357692.5chr1_66985112_+-1241.10-1241.40-1243.60
CAediting_73172ENST00000357692.5chr1_66985116_+-1241.50-1241.40-1243.60
CAediting_73173ENST00000357692.5chr1_66985166_+-1241.10-1241.40-1243.60
CAediting_73174ENST00000357692.5chr1_66986135_+-1242.20-1241.40-1243.60
CAediting_73133ENST00000371014.4chr1_66970945_+-473.60-472.70-473.60
CAediting_73133ENST00000371016.4chr1_66970945_+-494.70-493.80-494.70
CAediting_73133ENST00000371018.6chr1_66970945_+-967.50-967.40-967.50
CAediting_73133ENST00000401041.4chr1_66970945_+-669.60-669.60-670.20
CAediting_73171ENST00000401041.4chr1_66985112_+-670.70-669.60-670.20
CAediting_73172ENST00000401041.4chr1_66985116_+-669.70-669.60-670.20
CAediting_73173ENST00000401041.4chr1_66985166_+-669.30-669.60-670.20
CAediting_73133ENST00000401042.6chr1_66970945_+-454.80-453.90-454.80

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Relation with ADAR for MIER1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
ESCACAediting_73061chr1_66936878_+..0.01806169416018050.220169408523456..
STADCAediting_73063chr1_66936919_+....0.04961075209737020.217546291563384
BRCACAediting_73171chr1_66985112_+0.02498084572838750.187440633802204....

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Relation with cancer stages for MIER1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
ESCAclinical_stageCAediting_73061chr1_66936878_+0.0288698659628581-0.374999189373528
ESCApathologic_stageCAediting_73061chr1_66936878_+0.01677003214088240.234087420471045
STADpathologic_stageCAediting_73061chr1_66936878_+0.03205349226532540.170649032556811

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Relation with survival for MIER1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for MIER1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for MIER1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource