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Editing gene: CHD8 (CAeditome ID:57680)

Gene summary for CHD8

Gene summary

Gene information	Gene symbol	CHD8
	Gene ID	57680
	Gene name	chromodomain helicase DNA binding protein 8
	Synonyms	AUTS18\|HELSNF1
	Cytomap	14q11.2
	Type of gene	protein-coding
	Description	chromodomain-helicase-DNA-binding protein 8ATP-dependent helicase CHD8axis duplication inhibitorduplinhelicase with SNF2 domain 1
	Modification date	20210531
	UniProtAcc	Q9HCK8
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
CHD8	GO:0090090	Chromodomain-helicase-DNA-binding protein 8	22083958
CHD8	GO:0003682	Chromodomain-helicase-DNA-binding protein 8	22083958
CHD8	GO:0005524	Chromodomain-helicase-DNA-binding protein 8	18378692
CHD8	GO:0008013	Chromodomain-helicase-DNA-binding protein 8	18378692
CHD8	GO:0008013	Chromodomain-helicase-DNA-binding protein 8	22083958
CHD8	GO:0008094	Chromodomain-helicase-DNA-binding protein 8	18378692
CHD8	GO:0035064	Chromodomain-helicase-DNA-binding protein 8	17938208
CHD8	GO:0045893	Chromodomain-helicase-DNA-binding protein 8	17938208
CHD8	GO:0090090	Chromodomain-helicase-DNA-binding protein 8	18378692
CHD8	GO:0005634	Chromodomain-helicase-DNA-binding protein 8	18378692
CHD8	GO:0005634	Chromodomain-helicase-DNA-binding protein 8	20453063
CHD8	GO:0005654	Chromodomain-helicase-DNA-binding protein 8	0000052
CHD8	GO:0032991	Chromodomain-helicase-DNA-binding protein 8	18378692
CHD8	GO:0071339	Chromodomain-helicase-DNA-binding protein 8	15960975

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RNA A-to-I events for CHD8

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000100888.11

RNA A-to-I editing events in Cancer.

CAediting_976326(21386581, -), CAediting_976327(21386702, -), CAediting_976328(21386713, -), CAediting_976329(21386715, -), CAediting_976330(21386718, -), CAediting_976331(21386776, -), CAediting_976332(21386777, -), CAediting_976333(21386792, -), CAediting_976334(21387397, -), CAediting_976335(21387450, -), CAediting_976336(21387512, -), CAediting_976337(21388556, -), CAediting_976338(21388572, -), CAediting_976339(21388613, -), CAediting_976340(21388643, -), CAediting_976341(21388656, -), CAediting_976342(21388660, -), CAediting_976343(21388661, -), CAediting_976344(21388703, -), CAediting_976345(21388721, -), CAediting_976346(21388730, -), CAediting_976347(21388757, -), CAediting_976348(21388779, -), CAediting_976349(21389045, -), CAediting_976350(21389057, -), CAediting_976351(21389058, -), CAediting_976352(21389080, -), CAediting_976353(21389217, -), CAediting_976354(21389218, -), CAediting_976355(21389223, -), CAediting_976356(21389237, -), CAediting_976357(21389261, -), CAediting_976358(21389376, -), CAediting_976359(21389489, -), CAediting_976360(21389511, -), CAediting_976361(21389528, -), CAediting_976362(21389529, -), CAediting_976363(21389565, -), CAediting_976364(21389626, -), CAediting_976365(21389978, -), CAediting_976366(21390013, -), CAediting_976367(21390014, -), CAediting_976368(21390017, -), CAediting_976369(21390042, -), CAediting_976370(21390043, -), CAediting_976371(21390072, -), CAediting_976372(21390101, -), CAediting_976373(21390152, -), CAediting_976374(21390153, -), CAediting_976375(21390184, -), CAediting_976376(21390209, -), CAediting_976377(21390214, -), CAediting_976378(21390222, -), CAediting_976379(21390535, -), CAediting_976380(21390558, -), CAediting_976381(21390691, -), CAediting_976382(21390695, -), CAediting_976383(21390716, -), CAediting_976384(21411901, -), CAediting_976385(21411909, -), CAediting_976386(21411916, -), CAediting_976387(21411939, -), CAediting_976388(21416849, -), CAediting_976389(21418261, -), CAediting_976390(21418299, -), CAediting_976391(21418335, -), CAediting_976392(21418398, -), CAediting_976393(21418404, -), CAediting_976394(21422158, -), CAediting_976395(21422834, -), CAediting_976396(21423629, -), CAediting_976397(21423634, -), CAediting_976398(21423701, -), CAediting_976399(21424556, -), CAediting_976400(21424559, -), CAediting_976401(21425397, -), CAediting_976402(21425401, -), CAediting_976403(21425453, -), CAediting_976404(21425462, -), CAediting_976405(21425476, -), CAediting_976406(21425485, -), CAediting_976407(21425489, -), CAediting_976408(21425492, -), CAediting_976409(21425493, -), CAediting_976410(21425495, -), CAediting_976411(21425503, -), CAediting_976412(21425504, -), CAediting_976413(21425507, -), CAediting_976414(21425513, -), CAediting_976415(21425528, -), CAediting_976416(21425529, -), CAediting_976417(21425552, -), CAediting_976418(21425836, -), CAediting_976419(21425846, -), CAediting_976420(21425884, -), CAediting_976421(21434321, -), CAediting_976422(21439125, -), CAediting_976423(21445390, -), CAediting_976424(21445505, -), CAediting_976425(21445519, -), CAediting_976426(21445522, -), CAediting_976427(21445828, -), CAediting_976428(21445837, -), CAediting_976429(21445878, -), CAediting_976430(21446029, -), CAediting_976431(21446070, -), CAediting_976432(21446092, -), CAediting_976433(21446109, -), CAediting_976434(21446409, -), CAediting_976435(21446421, -), CAediting_976436(21446426, -), CAediting_976437(21446444, -), CAediting_976438(21446476, -), CAediting_976439(21446480, -), CAediting_976440(21446481, -), CAediting_976441(21446486, -), CAediting_976442(21446489, -), CAediting_976443(21446490, -), CAediting_976444(21446493, -), CAediting_976445(21446504, -), CAediting_976446(21446506, -), CAediting_976447(21446512, -), CAediting_976448(21446514, -), CAediting_976449(21446524, -), CAediting_976450(21446538, -), CAediting_976451(21446557, -), CAediting_976452(21446583, -), CAediting_976453(21447444, -), CAediting_976454(21447448, -), CAediting_976455(21447474, -), CAediting_976456(21447475, -), CAediting_976457(21447486, -), CAediting_976458(21447496, -), CAediting_976459(21447510, -), CAediting_976460(21447536, -), CAediting_976461(21447539, -), CAediting_976462(21450546, -), CAediting_976463(21450652, -), CAediting_976464(21452093, -), CAediting_976465(21452122, -), CAediting_976466(21452179, -), CAediting_976467(21452386, -), CAediting_976468(21452392, -), CAediting_976469(21452521, -), CAediting_976470(21452872, -), CAediting_976471(21452901, -), CAediting_976472(21453290, -), CAediting_976473(21454046, -), CAediting_976474(21454386, -), CAediting_976475(21454414, -), CAediting_976476(21454415, -), CAediting_976477(21454423, -), CAediting_976478(21454425, -), CAediting_976479(21454433, -), CAediting_976480(21454456, -), CAediting_976481(21454555, -),

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RNA editing positional annotations for CHD8 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_976326	chr14_21386581_-	intronic
CAediting_976327	chr14_21386702_-	intronic
CAediting_976328	chr14_21386713_-	intronic
CAediting_976329	chr14_21386715_-	intronic
CAediting_976330	chr14_21386718_-	intronic
CAediting_976331	chr14_21386776_-	intronic
CAediting_976332	chr14_21386777_-	intronic
CAediting_976333	chr14_21386792_-	intronic
CAediting_976334	chr14_21387397_-	intronic
CAediting_976335	chr14_21387450_-	intronic
CAediting_976336	chr14_21387512_-	intronic
CAediting_976337	chr14_21388556_-	intronic
CAediting_976338	chr14_21388572_-	intronic
CAediting_976339	chr14_21388613_-	intronic
CAediting_976340	chr14_21388643_-	intronic
CAediting_976341	chr14_21388656_-	intronic
CAediting_976342	chr14_21388660_-	intronic
CAediting_976343	chr14_21388661_-	intronic
CAediting_976344	chr14_21388703_-	intronic
CAediting_976345	chr14_21388721_-	intronic
CAediting_976346	chr14_21388730_-	intronic
CAediting_976347	chr14_21388757_-	intronic
CAediting_976348	chr14_21388779_-	intronic
CAediting_976349	chr14_21389045_-	intronic
CAediting_976350	chr14_21389057_-	intronic
CAediting_976351	chr14_21389058_-	intronic
CAediting_976352	chr14_21389080_-	intronic
CAediting_976353	chr14_21389217_-	intronic
CAediting_976354	chr14_21389218_-	intronic
CAediting_976355	chr14_21389223_-	intronic
CAediting_976356	chr14_21389237_-	intronic
CAediting_976357	chr14_21389261_-	intronic
CAediting_976358	chr14_21389376_-	intronic
CAediting_976359	chr14_21389489_-	intronic
CAediting_976360	chr14_21389511_-	intronic
CAediting_976361	chr14_21389528_-	intronic
CAediting_976362	chr14_21389529_-	intronic
CAediting_976363	chr14_21389565_-	intronic
CAediting_976364	chr14_21389626_-	intronic
CAediting_976365	chr14_21389978_-	intronic
CAediting_976366	chr14_21390013_-	intronic
CAediting_976367	chr14_21390014_-	intronic
CAediting_976368	chr14_21390017_-	intronic
CAediting_976369	chr14_21390042_-	intronic
CAediting_976370	chr14_21390043_-	intronic
CAediting_976371	chr14_21390072_-	intronic
CAediting_976372	chr14_21390101_-	intronic
CAediting_976373	chr14_21390152_-	intronic
CAediting_976374	chr14_21390153_-	intronic
CAediting_976375	chr14_21390184_-	intronic
CAediting_976376	chr14_21390209_-	intronic
CAediting_976377	chr14_21390214_-	intronic
CAediting_976378	chr14_21390222_-	intronic
CAediting_976379	chr14_21390535_-	intronic
CAediting_976380	chr14_21390558_-	intronic
CAediting_976381	chr14_21390691_-	intronic
CAediting_976382	chr14_21390695_-	intronic
CAediting_976383	chr14_21390716_-	intronic
CAediting_976384	chr14_21411901_-	ncRNA_intronic
CAediting_976385	chr14_21411909_-	ncRNA_intronic
CAediting_976386	chr14_21411916_-	ncRNA_intronic
CAediting_976387	chr14_21411939_-	ncRNA_intronic
CAediting_976388	chr14_21416849_-	ncRNA_intronic
CAediting_976389	chr14_21418261_-	ncRNA_intronic
CAediting_976390	chr14_21418299_-	ncRNA_intronic
CAediting_976391	chr14_21418335_-	ncRNA_intronic
CAediting_976392	chr14_21418398_-	ncRNA_intronic
CAediting_976393	chr14_21418404_-	ncRNA_intronic
CAediting_976394	chr14_21422158_-	ncRNA_intronic
CAediting_976395	chr14_21422834_-	ncRNA_intronic
CAediting_976396	chr14_21423629_-	ncRNA_intronic
CAediting_976397	chr14_21423634_-	ncRNA_intronic
CAediting_976398	chr14_21423701_-	ncRNA_intronic
CAediting_976399	chr14_21424556_-	ncRNA_intronic
CAediting_976400	chr14_21424559_-	ncRNA_intronic
CAediting_976401	chr14_21425397_-	ncRNA_intronic
CAediting_976402	chr14_21425401_-	ncRNA_intronic
CAediting_976403	chr14_21425453_-	ncRNA_intronic
CAediting_976404	chr14_21425462_-	ncRNA_intronic
CAediting_976405	chr14_21425476_-	ncRNA_intronic
CAediting_976406	chr14_21425485_-	ncRNA_intronic
CAediting_976407	chr14_21425489_-	ncRNA_intronic
CAediting_976408	chr14_21425492_-	ncRNA_intronic
CAediting_976409	chr14_21425493_-	ncRNA_intronic
CAediting_976410	chr14_21425495_-	ncRNA_intronic
CAediting_976411	chr14_21425503_-	ncRNA_intronic
CAediting_976412	chr14_21425504_-	ncRNA_intronic
CAediting_976413	chr14_21425507_-	ncRNA_intronic
CAediting_976414	chr14_21425513_-	ncRNA_intronic
CAediting_976415	chr14_21425528_-	ncRNA_intronic
CAediting_976416	chr14_21425529_-	ncRNA_intronic
CAediting_976417	chr14_21425552_-	ncRNA_intronic
CAediting_976418	chr14_21425836_-	ncRNA_intronic
CAediting_976419	chr14_21425846_-	ncRNA_intronic
CAediting_976420	chr14_21425884_-	ncRNA_intronic
CAediting_976421	chr14_21434321_-	ncRNA_intronic
CAediting_976422	chr14_21439125_-	ncRNA_intronic
CAediting_976423	chr14_21445390_-	ncRNA_intronic
CAediting_976424	chr14_21445505_-	ncRNA_intronic
CAediting_976425	chr14_21445519_-	ncRNA_intronic
CAediting_976426	chr14_21445522_-	ncRNA_intronic
CAediting_976427	chr14_21445828_-	ncRNA_intronic
CAediting_976428	chr14_21445837_-	ncRNA_intronic
CAediting_976429	chr14_21445878_-	ncRNA_intronic
CAediting_976430	chr14_21446029_-	ncRNA_intronic
CAediting_976431	chr14_21446070_-	ncRNA_intronic
CAediting_976432	chr14_21446092_-	ncRNA_intronic
CAediting_976433	chr14_21446109_-	ncRNA_intronic
CAediting_976434	chr14_21446409_-	ncRNA_intronic
CAediting_976435	chr14_21446421_-	ncRNA_intronic
CAediting_976436	chr14_21446426_-	ncRNA_intronic
CAediting_976437	chr14_21446444_-	ncRNA_intronic
CAediting_976438	chr14_21446476_-	ncRNA_intronic
CAediting_976439	chr14_21446480_-	ncRNA_intronic
CAediting_976440	chr14_21446481_-	ncRNA_intronic
CAediting_976441	chr14_21446486_-	ncRNA_intronic
CAediting_976442	chr14_21446489_-	ncRNA_intronic
CAediting_976443	chr14_21446490_-	ncRNA_intronic
CAediting_976444	chr14_21446493_-	ncRNA_intronic
CAediting_976445	chr14_21446504_-	ncRNA_intronic
CAediting_976446	chr14_21446506_-	ncRNA_intronic
CAediting_976447	chr14_21446512_-	ncRNA_intronic
CAediting_976448	chr14_21446514_-	ncRNA_intronic
CAediting_976449	chr14_21446524_-	ncRNA_intronic
CAediting_976450	chr14_21446538_-	ncRNA_intronic
CAediting_976451	chr14_21446557_-	ncRNA_intronic
CAediting_976452	chr14_21446583_-	ncRNA_intronic
CAediting_976453	chr14_21447444_-	ncRNA_intronic
CAediting_976454	chr14_21447448_-	ncRNA_intronic
CAediting_976455	chr14_21447474_-	ncRNA_intronic
CAediting_976456	chr14_21447475_-	ncRNA_intronic
CAediting_976457	chr14_21447486_-	ncRNA_intronic
CAediting_976458	chr14_21447496_-	ncRNA_intronic
CAediting_976459	chr14_21447510_-	ncRNA_intronic
CAediting_976460	chr14_21447536_-	ncRNA_intronic
CAediting_976461	chr14_21447539_-	ncRNA_intronic
CAediting_976462	chr14_21450546_-	ncRNA_intronic
CAediting_976463	chr14_21450652_-	ncRNA_intronic
CAediting_976464	chr14_21452093_-	ncRNA_intronic
CAediting_976465	chr14_21452122_-	ncRNA_intronic
CAediting_976466	chr14_21452179_-	ncRNA_intronic
CAediting_976467	chr14_21452386_-	ncRNA_intronic
CAediting_976468	chr14_21452392_-	ncRNA_intronic
CAediting_976469	chr14_21452521_-	ncRNA_intronic
CAediting_976470	chr14_21452872_-	ncRNA_intronic
CAediting_976471	chr14_21452901_-	ncRNA_intronic
CAediting_976472	chr14_21453290_-	ncRNA_intronic
CAediting_976473	chr14_21454046_-	ncRNA_intronic
CAediting_976474	chr14_21454386_-	ncRNA_intronic
CAediting_976475	chr14_21454414_-	ncRNA_intronic
CAediting_976476	chr14_21454415_-	ncRNA_intronic
CAediting_976477	chr14_21454423_-	ncRNA_intronic
CAediting_976478	chr14_21454425_-	ncRNA_intronic
CAediting_976479	chr14_21454433_-	ncRNA_intronic
CAediting_976480	chr14_21454456_-	ncRNA_intronic
CAediting_976481	chr14_21454555_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_976326	chr14_21386581_-	SINE	Alu	AluYf1
CAediting_976327	chr14_21386702_-	SINE	Alu	AluYf1
CAediting_976328	chr14_21386713_-	SINE	Alu	AluYf1
CAediting_976329	chr14_21386715_-	SINE	Alu	AluYf1
CAediting_976330	chr14_21386718_-	SINE	Alu	AluYf1
CAediting_976331	chr14_21386776_-	SINE	Alu	AluYf1
CAediting_976332	chr14_21386777_-	SINE	Alu	AluYf1
CAediting_976333	chr14_21386792_-	SINE	Alu	AluYf1
CAediting_976334	chr14_21387397_-	SINE	Alu	AluSp
CAediting_976335	chr14_21387450_-	SINE	Alu	AluSp
CAediting_976336	chr14_21387512_-	SINE	Alu	AluSp
CAediting_976337	chr14_21388556_-	SINE	Alu	AluJo
CAediting_976338	chr14_21388572_-	SINE	Alu	AluJo
CAediting_976339	chr14_21388613_-	SINE	Alu	AluJo
CAediting_976340	chr14_21388643_-	SINE	Alu	AluJo
CAediting_976341	chr14_21388656_-	SINE	Alu	AluJo
CAediting_976342	chr14_21388660_-	SINE	Alu	AluJo
CAediting_976343	chr14_21388661_-	SINE	Alu	AluJo
CAediting_976344	chr14_21388703_-	SINE	Alu	AluJo
CAediting_976345	chr14_21388721_-	SINE	Alu	AluJo
CAediting_976346	chr14_21388730_-	SINE	Alu	AluJo
CAediting_976347	chr14_21388757_-	SINE	Alu	AluJo
CAediting_976348	chr14_21388779_-	SINE	Alu	AluJo
CAediting_976349	chr14_21389045_-	SINE	Alu	AluSg
CAediting_976350	chr14_21389057_-	SINE	Alu	AluSg
CAediting_976351	chr14_21389058_-	SINE	Alu	AluSg
CAediting_976352	chr14_21389080_-	SINE	Alu	AluSg
CAediting_976353	chr14_21389217_-	SINE	Alu	AluSg
CAediting_976354	chr14_21389218_-	SINE	Alu	AluSg
CAediting_976355	chr14_21389223_-	SINE	Alu	AluSg
CAediting_976356	chr14_21389237_-	SINE	Alu	AluSg
CAediting_976357	chr14_21389261_-	SINE	Alu	AluSg
CAediting_976358	chr14_21389376_-	SINE	Alu	AluSz6
CAediting_976359	chr14_21389489_-	SINE	Alu	AluSz6
CAediting_976360	chr14_21389511_-	SINE	Alu	AluSz6
CAediting_976361	chr14_21389528_-	SINE	Alu	AluSz6
CAediting_976362	chr14_21389529_-	SINE	Alu	AluSz6
CAediting_976363	chr14_21389565_-	SINE	Alu	AluSz6
CAediting_976364	chr14_21389626_-	SINE	Alu	AluSz6
CAediting_976365	chr14_21389978_-	SINE	Alu	AluSz
CAediting_976366	chr14_21390013_-	SINE	Alu	AluSz
CAediting_976367	chr14_21390014_-	SINE	Alu	AluSz
CAediting_976368	chr14_21390017_-	SINE	Alu	AluSz
CAediting_976369	chr14_21390042_-	SINE	Alu	AluSz
CAediting_976370	chr14_21390043_-	SINE	Alu	AluSz
CAediting_976371	chr14_21390072_-	SINE	Alu	AluSz
CAediting_976372	chr14_21390101_-	SINE	Alu	AluSz
CAediting_976373	chr14_21390152_-	SINE	Alu	AluSz
CAediting_976374	chr14_21390153_-	SINE	Alu	AluSz
CAediting_976375	chr14_21390184_-	SINE	Alu	AluSz
CAediting_976376	chr14_21390209_-	SINE	Alu	AluSz
CAediting_976377	chr14_21390214_-	SINE	Alu	AluSz
CAediting_976378	chr14_21390222_-	SINE	Alu	AluSz
CAediting_976379	chr14_21390535_-	SINE	Alu	AluSg4
CAediting_976380	chr14_21390558_-	SINE	Alu	AluSg4
CAediting_976381	chr14_21390691_-	SINE	Alu	AluSg4
CAediting_976382	chr14_21390695_-	SINE	Alu	AluSg4
CAediting_976383	chr14_21390716_-	SINE	Alu	AluSg4
CAediting_976384	chr14_21411901_-	SINE	Alu	AluSz
CAediting_976385	chr14_21411909_-	SINE	Alu	AluSz
CAediting_976386	chr14_21411916_-	SINE	Alu	AluSz
CAediting_976387	chr14_21411939_-	SINE	Alu	AluSz
CAediting_976388	chr14_21416849_-	SINE	Alu	AluSx1
CAediting_976389	chr14_21418261_-	SINE	Alu	AluSz
CAediting_976390	chr14_21418299_-	SINE	Alu	AluSz
CAediting_976391	chr14_21418335_-	SINE	Alu	AluSz
CAediting_976392	chr14_21418398_-	SINE	Alu	AluSz
CAediting_976393	chr14_21418404_-	SINE	Alu	AluSz
CAediting_976394	chr14_21422158_-	SINE	Alu	AluSx
CAediting_976395	chr14_21422834_-	SINE	Alu	AluSz
CAediting_976396	chr14_21423629_-	SINE	Alu	AluJb
CAediting_976397	chr14_21423634_-	SINE	Alu	AluJb
CAediting_976398	chr14_21423701_-	SINE	Alu	AluJb
CAediting_976399	chr14_21424556_-	SINE	Alu	AluY
CAediting_976400	chr14_21424559_-	SINE	Alu	AluY
CAediting_976401	chr14_21425397_-	SINE	Alu	AluSx1
CAediting_976402	chr14_21425401_-	SINE	Alu	AluSx1
CAediting_976403	chr14_21425453_-	SINE	Alu	AluSx1
CAediting_976404	chr14_21425462_-	SINE	Alu	AluSx1
CAediting_976405	chr14_21425476_-	SINE	Alu	AluSx1
CAediting_976406	chr14_21425485_-	SINE	Alu	AluSx1
CAediting_976407	chr14_21425489_-	SINE	Alu	AluSx1
CAediting_976408	chr14_21425492_-	SINE	Alu	AluSx1
CAediting_976409	chr14_21425493_-	SINE	Alu	AluSx1
CAediting_976410	chr14_21425495_-	SINE	Alu	AluSx1
CAediting_976411	chr14_21425503_-	SINE	Alu	AluSx1
CAediting_976412	chr14_21425504_-	SINE	Alu	AluSx1
CAediting_976413	chr14_21425507_-	SINE	Alu	AluSx1
CAediting_976414	chr14_21425513_-	SINE	Alu	AluSx1
CAediting_976415	chr14_21425528_-	SINE	Alu	AluSx1
CAediting_976416	chr14_21425529_-	SINE	Alu	AluSx1
CAediting_976417	chr14_21425552_-	SINE	Alu	AluSx1
CAediting_976418	chr14_21425836_-	SINE	Alu	AluSz
CAediting_976419	chr14_21425846_-	SINE	Alu	AluSz
CAediting_976420	chr14_21425884_-	SINE	Alu	AluSz
CAediting_976421	chr14_21434321_-	SINE	Alu	AluSp
CAediting_976422	chr14_21439125_-	SINE	Alu	AluSz6
CAediting_976423	chr14_21445390_-	SINE	Alu	AluSg4
CAediting_976424	chr14_21445505_-	SINE	Alu	AluSx
CAediting_976425	chr14_21445519_-	SINE	Alu	AluSx
CAediting_976426	chr14_21445522_-	SINE	Alu	AluSx
CAediting_976427	chr14_21445828_-	SINE	Alu	AluSg4
CAediting_976428	chr14_21445837_-	SINE	Alu	AluSg4
CAediting_976429	chr14_21445878_-	SINE	Alu	AluSg4
CAediting_976430	chr14_21446029_-	SINE	Alu	AluSg4
CAediting_976431	chr14_21446070_-	SINE	Alu	AluSg4
CAediting_976432	chr14_21446092_-	SINE	Alu	AluSg4
CAediting_976433	chr14_21446109_-	SINE	Alu	AluSg4
CAediting_976434	chr14_21446409_-	SINE	Alu	AluSz6
CAediting_976435	chr14_21446421_-	SINE	Alu	AluSz6
CAediting_976436	chr14_21446426_-	SINE	Alu	AluSz6
CAediting_976437	chr14_21446444_-	SINE	Alu	AluSz6
CAediting_976438	chr14_21446476_-	SINE	Alu	AluSz6
CAediting_976439	chr14_21446480_-	SINE	Alu	AluSz6
CAediting_976440	chr14_21446481_-	SINE	Alu	AluSz6
CAediting_976441	chr14_21446486_-	SINE	Alu	AluSz6
CAediting_976442	chr14_21446489_-	SINE	Alu	AluSz6
CAediting_976443	chr14_21446490_-	SINE	Alu	AluSz6
CAediting_976444	chr14_21446493_-	SINE	Alu	AluSz6
CAediting_976445	chr14_21446504_-	SINE	Alu	AluSz6
CAediting_976446	chr14_21446506_-	SINE	Alu	AluSz6
CAediting_976447	chr14_21446512_-	SINE	Alu	AluSz6
CAediting_976448	chr14_21446514_-	SINE	Alu	AluSz6
CAediting_976449	chr14_21446524_-	SINE	Alu	AluSz6
CAediting_976450	chr14_21446538_-	SINE	Alu	AluSz6
CAediting_976451	chr14_21446557_-	SINE	Alu	AluSz6
CAediting_976452	chr14_21446583_-	SINE	Alu	AluSz6
CAediting_976453	chr14_21447444_-	SINE	Alu	AluSx
CAediting_976454	chr14_21447448_-	SINE	Alu	AluSx
CAediting_976455	chr14_21447474_-	SINE	Alu	AluSx
CAediting_976456	chr14_21447475_-	SINE	Alu	AluSx
CAediting_976457	chr14_21447486_-	SINE	Alu	AluSx
CAediting_976458	chr14_21447496_-	SINE	Alu	AluSx
CAediting_976459	chr14_21447510_-	SINE	Alu	AluSx
CAediting_976460	chr14_21447536_-	SINE	Alu	AluSx
CAediting_976461	chr14_21447539_-	SINE	Alu	AluSx
CAediting_976462	chr14_21450546_-	SINE	Alu	AluJr
CAediting_976463	chr14_21450652_-	SINE	Alu	AluJr
CAediting_976464	chr14_21452093_-	SINE	Alu	AluSc
CAediting_976465	chr14_21452122_-	SINE	Alu	AluSc
CAediting_976466	chr14_21452179_-	SINE	Alu	AluSc
CAediting_976467	chr14_21452386_-	SINE	Alu	AluSx
CAediting_976468	chr14_21452392_-	SINE	Alu	AluSx
CAediting_976469	chr14_21452521_-	SINE	Alu	AluSx
CAediting_976470	chr14_21452872_-	SINE	Alu	AluSx4
CAediting_976471	chr14_21452901_-	SINE	Alu	AluSx4
CAediting_976472	chr14_21453290_-	SINE	Alu	AluSx4
CAediting_976473	chr14_21454046_-	SINE	Alu	AluSx3
CAediting_976474	chr14_21454386_-	SINE	Alu	AluSz
CAediting_976475	chr14_21454414_-	SINE	Alu	AluSz
CAediting_976476	chr14_21454415_-	SINE	Alu	AluSz
CAediting_976477	chr14_21454423_-	SINE	Alu	AluSz
CAediting_976478	chr14_21454425_-	SINE	Alu	AluSz
CAediting_976479	chr14_21454433_-	SINE	Alu	AluSz
CAediting_976480	chr14_21454456_-	SINE	Alu	AluSz
CAediting_976481	chr14_21454555_-	SINE	Alu	AluSz

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RNA A-to-I editing events in the alternative splicing sites for CHD8

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000100888.11.CHD8.

Correlation between RNA A-to-I editing and PSI for ENSG00000100888.11.CHD8.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CHD8

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CHD8

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for CHD8

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CHD8

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for CHD8

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for CHD8

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for CHD8

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for CHD8

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for CHD8

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
CHD8	C1510586	Autism Spectrum Disorders	8	CLINGEN;CTD_human
CHD8	C3554373	AUTISM, SUSCEPTIBILITY TO, 18	3	GENOMICS_ENGLAND;UNIPROT
CHD8	C0004352	Autistic Disorder	2	CTD_human;GENOMICS_ENGLAND
CHD8	C0221355	Macrocephaly	2	CTD_human
CHD8	C0017178	Gastrointestinal Diseases	1	CTD_human
CHD8	C0020796	Profound Mental Retardation	1	CTD_human
CHD8	C0025363	Mental Retardation, Psychosocial	1	CTD_human
CHD8	C0282631	Facies	1	CTD_human
CHD8	C0559031	Functional Gastrointestinal Disorders	1	CTD_human
CHD8	C0917816	Mental deficiency	1	CTD_human
CHD8	C1565321	Cholera Infantum	1	CTD_human
CHD8	C3714756	Intellectual Disability	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene