|
Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples | |
The effects of the RNA editing to the stability of the RNA structures | |
Editing gene: RNF213 (CAeditome ID:57674) |
Gene summary for RNF213 |
Gene summary |
Gene information | Gene symbol | RNF213 | Gene ID | 57674 |
Gene name | ring finger protein 213 | |
Synonyms | ALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57 | |
Cytomap | 17q25.3 | |
Type of gene | protein-coding | |
Description | E3 ubiquitin-protein ligase RNF213ALK lymphoma oligomerization partner on chromosome 17RING-type E3 ubiquitin transferase RNF213mysterin | |
Modification date | 20210518 | |
UniProtAcc | Q63HN8 | |
Context | - 33200540(RNF213 gene mutation in circulating tumor DNA detected by targeted next-generation sequencing in the assisted discrimination of early-stage lung cancer from pulmonary nodules) |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Gene | GO ID | GO term | PubMed ID |
RNF213 | GO:0004842 | E3 ubiquitin-protein ligase RNF213 | 21799892 |
RNF213 | GO:0140603 | E3 ubiquitin-protein ligase RNF213 | 21799892 |
RNF213 | GO:0140603 | E3 ubiquitin-protein ligase RNF213 | 24658080 |
RNF213 | GO:0140603 | E3 ubiquitin-protein ligase RNF213 | 26126547 |
RNF213 | GO:0016567 | E3 ubiquitin-protein ligase RNF213 | 21799892 |
RNF213 | GO:0051260 | E3 ubiquitin-protein ligase RNF213 | 24658080 |
RNF213 | GO:0051260 | E3 ubiquitin-protein ligase RNF213 | 26126547 |
RNF213 | GO:0051865 | E3 ubiquitin-protein ligase RNF213 | 21799892 |
RNF213 | GO:0005730 | E3 ubiquitin-protein ligase RNF213 | 0000052 |
RNF213 | GO:0005737 | E3 ubiquitin-protein ligase RNF213 | 21799892 |
RNF213 | GO:0005829 | E3 ubiquitin-protein ligase RNF213 | 0000052 |
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RNA A-to-I events for RNF213 |
RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure. |
RNA editing frequencies across 33 cancers of gene: ENSG00000173821.18 |
RNA A-to-I editing events in Cancer. |
CAediting_1244431(80265788, +), CAediting_1244432(80265837, +), CAediting_1244433(80265850, +), CAediting_1244434(80265860, +), CAediting_1244435(80266178, +), CAediting_1244436(80266186, +), CAediting_1244437(80266217, +), CAediting_1244438(80266252, +), CAediting_1244439(80266329, +), CAediting_1244440(80266334, +), CAediting_1244441(80266343, +), CAediting_1244442(80266358, +), CAediting_1244443(80266525, +), CAediting_1244444(80266545, +), CAediting_1244445(80266566, +), CAediting_1244446(80266571, +), CAediting_1244447(80266576, +), CAediting_1244448(80266581, +), CAediting_1244449(80266595, +), CAediting_1244450(80266619, +), CAediting_1244451(80266628, +), CAediting_1244452(80266631, +), CAediting_1244453(80266638, +), CAediting_1244454(80266641, +), CAediting_1244455(80266650, +), CAediting_1244456(80266674, +), CAediting_1244457(80266682, +), CAediting_1244458(80266685, +), CAediting_1244459(80266711, +), CAediting_1244460(80266722, +), CAediting_1244461(80266723, +), CAediting_1244462(80266724, +), CAediting_1244463(80266736, +), CAediting_1244464(80266737, +), CAediting_1244465(80266764, +), CAediting_1244466(80266988, +), CAediting_1244467(80266997, +), CAediting_1244468(80267007, +), CAediting_1244469(80267097, +), CAediting_1244470(80267126, +), CAediting_1244471(80267137, +), CAediting_1244472(80267138, +), CAediting_1244473(80267142, +), CAediting_1244474(80267264, +), CAediting_1244475(80267265, +), CAediting_1244476(80267288, +), CAediting_1244477(80267294, +), CAediting_1244478(80267326, +), CAediting_1244479(80267330, +), CAediting_1244480(80267363, +), CAediting_1244481(80267364, +), CAediting_1244482(80267368, +), CAediting_1244483(80267384, +), CAediting_1244484(80267437, +), CAediting_1244485(80267949, +), CAediting_1244486(80267986, +), CAediting_1244487(80267988, +), CAediting_1244488(80268003, +), CAediting_1244489(80268009, +), CAediting_1244490(80268025, +), CAediting_1244491(80268055, +), CAediting_1244492(80268274, +), CAediting_1244493(80272164, +), CAediting_1244494(80273759, +), CAediting_1244495(80275731, +), CAediting_1244496(80275802, +), CAediting_1244497(80276149, +), CAediting_1244498(80276791, +), CAediting_1244499(80276841, +), CAediting_1244500(80276865, +), CAediting_1244501(80276867, +), CAediting_1244502(80276875, +), CAediting_1244503(80276910, +), CAediting_1244504(80276937, +), CAediting_1244505(80276959, +), CAediting_1244506(80276963, +), CAediting_1244507(80277342, +), CAediting_1244508(80277343, +), CAediting_1244509(80277403, +), CAediting_1244510(80277411, +), CAediting_1244511(80277412, +), CAediting_1244512(80277414, +), CAediting_1244513(80277422, +), CAediting_1244514(80277439, +), CAediting_1244515(80277442, +), CAediting_1244516(80277445, +), CAediting_1244517(80277447, +), CAediting_1244518(80277451, +), CAediting_1244519(80277477, +), CAediting_1244520(80277478, +), CAediting_1244521(80277487, +), CAediting_1244522(80277491, +), CAediting_1244523(80277494, +), CAediting_1244524(80277504, +), CAediting_1244525(80277519, +), CAediting_1244526(80277543, +), CAediting_1244527(80280528, +), CAediting_1244528(80280557, +), CAediting_1244529(80280571, +), CAediting_1244530(80280583, +), CAediting_1244531(80280593, +), CAediting_1244532(80280609, +), CAediting_1244533(80280660, +), CAediting_1244534(80280675, +), CAediting_1244535(80280676, +), CAediting_1244536(80280690, +), CAediting_1244537(80280693, +), CAediting_1244538(80280707, +), CAediting_1244539(80280729, +), CAediting_1244540(80282037, +), CAediting_1244541(80282040, +), CAediting_1244542(80282528, +), CAediting_1244543(80282605, +), CAediting_1244544(80282881, +), CAediting_1244545(80284014, +), CAediting_1244546(80284091, +), CAediting_1244547(80284180, +), CAediting_1244548(80284181, +), CAediting_1244549(80284217, +), CAediting_1244550(80284243, +), CAediting_1244551(80284244, +), CAediting_1244552(80284253, +), CAediting_1244553(80284279, +), CAediting_1244554(80284284, +), CAediting_1244555(80284485, +), CAediting_1244556(80284526, +), CAediting_1244557(80285855, +), CAediting_1244558(80285911, +), CAediting_1244559(80285938, +), CAediting_1244560(80287241, +), CAediting_1244561(80287294, +), CAediting_1244562(80287309, +), CAediting_1244563(80287356, +), CAediting_1244564(80287366, +), CAediting_1244565(80287376, +), CAediting_1244566(80287397, +), CAediting_1244567(80287418, +), CAediting_1244568(80287423, +), CAediting_1244569(80287442, +), CAediting_1244570(80292138, +), CAediting_1244571(80292149, +), CAediting_1244572(80292178, +), CAediting_1244573(80292184, +), CAediting_1244574(80292202, +), CAediting_1244575(80292211, +), CAediting_1244576(80292214, +), CAediting_1244577(80292246, +), CAediting_1244578(80292273, +), CAediting_1244579(80292284, +), CAediting_1244580(80292350, +), CAediting_1244581(80293077, +), CAediting_1244582(80293097, +), CAediting_1244583(80293102, +), CAediting_1244584(80293119, +), CAediting_1244585(80293144, +), CAediting_1244586(80293233, +), CAediting_1244587(80293323, +), CAediting_1244588(80293336, +), CAediting_1244589(80293337, +), CAediting_1244590(80293568, +), CAediting_1244591(80293569, +), CAediting_1244592(80293666, +), CAediting_1244593(80293706, +), CAediting_1244594(80293712, +), CAediting_1244595(80293716, +), CAediting_1244596(80293723, +), CAediting_1244597(80293733, +), CAediting_1244598(80293748, +), CAediting_1244599(80293768, +), CAediting_1244600(80293776, +), CAediting_1244601(80293777, +), CAediting_1244602(80296106, +), CAediting_1244603(80296113, +), CAediting_1244604(80296152, +), CAediting_1244605(80296159, +), CAediting_1244606(80296161, +), CAediting_1244607(80296794, +), CAediting_1244608(80296811, +), CAediting_1244609(80297330, +), CAediting_1244610(80297356, +), CAediting_1244611(80297492, +), CAediting_1244612(80297610, +), CAediting_1244613(80297838, +), CAediting_1244614(80298755, +), CAediting_1244615(80298858, +), CAediting_1244616(80298859, +), CAediting_1244617(80298897, +), CAediting_1244618(80298900, +), CAediting_1244619(80298934, +), CAediting_1244620(80298961, +), CAediting_1244621(80300136, +), CAediting_1244622(80300173, +), CAediting_1244623(80300174, +), CAediting_1244624(80300202, +), CAediting_1244625(80300220, +), CAediting_1244626(80300227, +), CAediting_1244627(80300647, +), CAediting_1244628(80300814, +), CAediting_1244629(80301512, +), CAediting_1244630(80301514, +), CAediting_1244631(80301518, +), CAediting_1244632(80301521, +), CAediting_1244633(80301524, +), CAediting_1244634(80301529, +), CAediting_1244635(80301564, +), CAediting_1244636(80301569, +), CAediting_1244637(80301591, +), CAediting_1244638(80301603, +), CAediting_1244639(80301615, +), CAediting_1244640(80301617, +), CAediting_1244641(80301630, +), CAediting_1244642(80301631, +), CAediting_1244643(80301638, +), CAediting_1244644(80301642, +), CAediting_1244645(80301690, +), CAediting_1244646(80301695, +), CAediting_1244647(80301699, +), CAediting_1244648(80301866, +), CAediting_1244649(80301913, +), CAediting_1244650(80301939, +), CAediting_1244651(80301942, +), CAediting_1244652(80301956, +), CAediting_1244653(80301957, +), CAediting_1244654(80301960, +), CAediting_1244655(80301963, +), CAediting_1244656(80302627, +), CAediting_1244657(80303832, +), CAediting_1244658(80304519, +), CAediting_1244659(80305882, +), CAediting_1244660(80306019, +), CAediting_1244661(80306050, +), CAediting_1244662(80306731, +), CAediting_1244663(80309873, +), CAediting_1244664(80309882, +), CAediting_1244665(80309895, +), CAediting_1244666(80309897, +), CAediting_1244667(80309936, +), CAediting_1244668(80309939, +), CAediting_1244669(80309953, +), CAediting_1244670(80309961, +), CAediting_1244671(80310035, +), CAediting_1244672(80311855, +), CAediting_1244673(80311858, +), CAediting_1244674(80311871, +), CAediting_1244675(80311872, +), CAediting_1244676(80311877, +), CAediting_1244677(80311895, +), CAediting_1244678(80311898, +), CAediting_1244679(80311902, +), CAediting_1244680(80311912, +), CAediting_1244681(80311928, +), CAediting_1244682(80311940, +), CAediting_1244683(80311941, +), CAediting_1244684(80311949, +), CAediting_1244685(80311951, +), CAediting_1244686(80311962, +), CAediting_1244687(80311965, +), CAediting_1244688(80311966, +), CAediting_1244689(80311967, +), CAediting_1244690(80311968, +), CAediting_1244691(80311969, +), CAediting_1244692(80311970, +), CAediting_1244693(80311972, +), CAediting_1244694(80311975, +), CAediting_1244695(80311976, +), CAediting_1244696(80311977, +), CAediting_1244697(80311978, +), CAediting_1244698(80311981, +), CAediting_1244699(80312001, +), CAediting_1244700(80312007, +), CAediting_1244701(80312008, +), CAediting_1244702(80312013, +), CAediting_1244703(80312024, +), CAediting_1244704(80312030, +), CAediting_1244705(80312031, +), CAediting_1244706(80312043, +), CAediting_1244707(80312077, +), CAediting_1244708(80312078, +), CAediting_1244709(80318713, +), CAediting_1244710(80320371, +), CAediting_1244711(80320373, +), CAediting_1244712(80320377, +), CAediting_1244713(80320383, +), CAediting_1244714(80320408, +), CAediting_1244715(80320417, +), CAediting_1244716(80320427, +), CAediting_1244717(80320432, +), CAediting_1244718(80320453, +), CAediting_1244719(80320470, +), CAediting_1244720(80320479, +), CAediting_1244721(80320548, +), CAediting_1244722(80320570, +), CAediting_1244723(80320573, +), CAediting_1244724(80320575, +), CAediting_1244725(80320579, +), CAediting_1244726(80320590, +), CAediting_1244727(80320599, +), CAediting_1244728(80320651, +), CAediting_1244729(80320659, +), CAediting_1244730(80320661, +), CAediting_1244731(80320664, +), CAediting_1244732(80320666, +), CAediting_1244733(80320673, +), CAediting_1244734(80320677, +), CAediting_1244735(80320725, +), CAediting_1244736(80320735, +), CAediting_1244737(80320743, +), CAediting_1244738(80320744, +), CAediting_1244739(80320747, +), CAediting_1244740(80320765, +), CAediting_1244741(80320779, +), CAediting_1244742(80320789, +), CAediting_1244743(80320791, +), CAediting_1244744(80320793, +), CAediting_1244745(80320797, +), CAediting_1244746(80320821, +), CAediting_1244747(80320826, +), CAediting_1244748(80320828, +), CAediting_1244749(80320831, +), CAediting_1244750(80320832, +), CAediting_1244751(80320840, +), CAediting_1244752(80320844, +), CAediting_1244753(80320848, +), CAediting_1244754(80320872, +), CAediting_1244755(80320876, +), CAediting_1244756(80320883, +), CAediting_1244757(80320889, +), CAediting_1244758(80320896, +), CAediting_1244759(80320915, +), CAediting_1244760(80320920, +), CAediting_1244761(80320921, +), CAediting_1244762(80320925, +), CAediting_1244763(80320928, +), CAediting_1244764(80320932, +), CAediting_1244765(80320936, +), CAediting_1244766(80320939, +), CAediting_1244767(80320942, +), CAediting_1244768(80320944, +), CAediting_1244769(80320947, +), CAediting_1244770(80320952, +), CAediting_1244771(80320957, +), CAediting_1244772(80320958, +), CAediting_1244773(80320967, +), CAediting_1244774(80320969, +), CAediting_1244775(80320971, +), CAediting_1244776(80320974, +), CAediting_1244777(80320975, +), CAediting_1244778(80320987, +), CAediting_1244779(80320988, +), CAediting_1244780(80320989, +), CAediting_1244781(80320990, +), CAediting_1244782(80320991, +), CAediting_1244783(80321001, +), CAediting_1244784(80321763, +), CAediting_1244785(80321767, +), CAediting_1244786(80321779, +), CAediting_1244787(80321825, +), CAediting_1244788(80321900, +), CAediting_1244789(80322200, +), CAediting_1244790(80322214, +), CAediting_1244791(80322222, +), CAediting_1244792(80322238, +), CAediting_1244793(80322293, +), CAediting_1244794(80322300, +), CAediting_1244795(80322302, +), CAediting_1244796(80322399, +), CAediting_1244797(80322455, +), CAediting_1244798(80322483, +), CAediting_1244799(80322517, +), CAediting_1244800(80322526, +), CAediting_1244801(80322541, +), CAediting_1244802(80322598, +), CAediting_1244803(80323575, +), CAediting_1244804(80323589, +), CAediting_1244805(80323604, +), CAediting_1244806(80329567, +), CAediting_1244807(80329595, +), CAediting_1244808(80329596, +), CAediting_1244809(80329647, +), CAediting_1244810(80329651, +), CAediting_1244811(80329710, +), CAediting_1244812(80329751, +), CAediting_1244813(80330952, +), CAediting_1244814(80330957, +), CAediting_1244815(80330983, +), CAediting_1244816(80331071, +), CAediting_1244817(80331458, +), CAediting_1244818(80331572, +), CAediting_1244819(80333586, +), CAediting_1244820(80333588, +), CAediting_1244821(80334646, +), CAediting_1244822(80334650, +), CAediting_1244823(80334707, +), CAediting_1244824(80334768, +), CAediting_1244825(80334792, +), CAediting_1244826(80334811, +), CAediting_1244827(80334833, +), CAediting_1244828(80334837, +), CAediting_1244829(80334888, +), CAediting_1244830(80336757, +), CAediting_1244831(80336761, +), CAediting_1244832(80336783, +), CAediting_1244833(80336784, +), CAediting_1244834(80336808, +), CAediting_1244835(80336910, +), CAediting_1244836(80336911, +), CAediting_1244837(80336912, +), CAediting_1244838(80336913, +), CAediting_1244839(80336915, +), CAediting_1244840(80336916, +), CAediting_1244841(80336918, +), CAediting_1244842(80340836, +), CAediting_1244843(80340858, +), CAediting_1244844(80340931, +), CAediting_1244845(80340938, +), CAediting_1244846(80341591, +), CAediting_1244847(80341599, +), CAediting_1244848(80341630, +), CAediting_1244849(80341658, +), CAediting_1244850(80341663, +), CAediting_1244851(80341664, +), CAediting_1244852(80341690, +), CAediting_1244853(80341693, +), CAediting_1244854(80341713, +), CAediting_1244855(80341725, +), CAediting_1244856(80341726, +), CAediting_1244857(80341838, +), CAediting_1244858(80341936, +), CAediting_1244859(80351461, +), |
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RNA editing positional annotations for RNF213 using Annovar |
Protein coding RNA editing(s). |
CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
CAeditome ID | Position | Variant type |
CAediting_1244431 | chr17_80265788_+ | intronic |
CAediting_1244432 | chr17_80265837_+ | intronic |
CAediting_1244433 | chr17_80265850_+ | intronic |
CAediting_1244434 | chr17_80265860_+ | intronic |
CAediting_1244435 | chr17_80266178_+ | intronic |
CAediting_1244436 | chr17_80266186_+ | intronic |
CAediting_1244437 | chr17_80266217_+ | intronic |
CAediting_1244438 | chr17_80266252_+ | intronic |
CAediting_1244439 | chr17_80266329_+ | intronic |
CAediting_1244440 | chr17_80266334_+ | intronic |
CAediting_1244441 | chr17_80266343_+ | intronic |
CAediting_1244442 | chr17_80266358_+ | intronic |
CAediting_1244443 | chr17_80266525_+ | intronic |
CAediting_1244444 | chr17_80266545_+ | intronic |
CAediting_1244445 | chr17_80266566_+ | intronic |
CAediting_1244446 | chr17_80266571_+ | intronic |
CAediting_1244447 | chr17_80266576_+ | intronic |
CAediting_1244448 | chr17_80266581_+ | intronic |
CAediting_1244449 | chr17_80266595_+ | intronic |
CAediting_1244450 | chr17_80266619_+ | intronic |
CAediting_1244451 | chr17_80266628_+ | intronic |
CAediting_1244452 | chr17_80266631_+ | intronic |
CAediting_1244453 | chr17_80266638_+ | intronic |
CAediting_1244454 | chr17_80266641_+ | intronic |
CAediting_1244455 | chr17_80266650_+ | intronic |
CAediting_1244456 | chr17_80266674_+ | intronic |
CAediting_1244457 | chr17_80266682_+ | intronic |
CAediting_1244458 | chr17_80266685_+ | intronic |
CAediting_1244459 | chr17_80266711_+ | intronic |
CAediting_1244460 | chr17_80266722_+ | intronic |
CAediting_1244461 | chr17_80266723_+ | intronic |
CAediting_1244462 | chr17_80266724_+ | intronic |
CAediting_1244463 | chr17_80266736_+ | intronic |
CAediting_1244464 | chr17_80266737_+ | intronic |
CAediting_1244465 | chr17_80266764_+ | intronic |
CAediting_1244466 | chr17_80266988_+ | intronic |
CAediting_1244467 | chr17_80266997_+ | intronic |
CAediting_1244468 | chr17_80267007_+ | intronic |
CAediting_1244469 | chr17_80267097_+ | intronic |
CAediting_1244470 | chr17_80267126_+ | intronic |
CAediting_1244471 | chr17_80267137_+ | intronic |
CAediting_1244472 | chr17_80267138_+ | intronic |
CAediting_1244473 | chr17_80267142_+ | intronic |
CAediting_1244474 | chr17_80267264_+ | intronic |
CAediting_1244475 | chr17_80267265_+ | intronic |
CAediting_1244476 | chr17_80267288_+ | intronic |
CAediting_1244477 | chr17_80267294_+ | intronic |
CAediting_1244478 | chr17_80267326_+ | intronic |
CAediting_1244479 | chr17_80267330_+ | intronic |
CAediting_1244480 | chr17_80267363_+ | intronic |
CAediting_1244481 | chr17_80267364_+ | intronic |
CAediting_1244482 | chr17_80267368_+ | intronic |
CAediting_1244483 | chr17_80267384_+ | intronic |
CAediting_1244484 | chr17_80267437_+ | intronic |
CAediting_1244485 | chr17_80267949_+ | intronic |
CAediting_1244486 | chr17_80267986_+ | intronic |
CAediting_1244487 | chr17_80267988_+ | intronic |
CAediting_1244488 | chr17_80268003_+ | intronic |
CAediting_1244489 | chr17_80268009_+ | intronic |
CAediting_1244490 | chr17_80268025_+ | intronic |
CAediting_1244491 | chr17_80268055_+ | intronic |
CAediting_1244492 | chr17_80268274_+ | intronic |
CAediting_1244493 | chr17_80272164_+ | intronic |
CAediting_1244494 | chr17_80273759_+ | intronic |
CAediting_1244495 | chr17_80275731_+ | intronic |
CAediting_1244496 | chr17_80275802_+ | intronic |
CAediting_1244497 | chr17_80276149_+ | intronic |
CAediting_1244498 | chr17_80276791_+ | intronic |
CAediting_1244499 | chr17_80276841_+ | intronic |
CAediting_1244500 | chr17_80276865_+ | intronic |
CAediting_1244501 | chr17_80276867_+ | intronic |
CAediting_1244502 | chr17_80276875_+ | intronic |
CAediting_1244503 | chr17_80276910_+ | intronic |
CAediting_1244504 | chr17_80276937_+ | intronic |
CAediting_1244505 | chr17_80276959_+ | intronic |
CAediting_1244506 | chr17_80276963_+ | intronic |
CAediting_1244507 | chr17_80277342_+ | intronic |
CAediting_1244508 | chr17_80277343_+ | intronic |
CAediting_1244509 | chr17_80277403_+ | intronic |
CAediting_1244510 | chr17_80277411_+ | intronic |
CAediting_1244511 | chr17_80277412_+ | intronic |
CAediting_1244512 | chr17_80277414_+ | intronic |
CAediting_1244513 | chr17_80277422_+ | intronic |
CAediting_1244514 | chr17_80277439_+ | intronic |
CAediting_1244515 | chr17_80277442_+ | intronic |
CAediting_1244516 | chr17_80277445_+ | intronic |
CAediting_1244517 | chr17_80277447_+ | intronic |
CAediting_1244518 | chr17_80277451_+ | intronic |
CAediting_1244519 | chr17_80277477_+ | intronic |
CAediting_1244520 | chr17_80277478_+ | intronic |
CAediting_1244521 | chr17_80277487_+ | intronic |
CAediting_1244522 | chr17_80277491_+ | intronic |
CAediting_1244523 | chr17_80277494_+ | intronic |
CAediting_1244524 | chr17_80277504_+ | intronic |
CAediting_1244525 | chr17_80277519_+ | intronic |
CAediting_1244526 | chr17_80277543_+ | intronic |
CAediting_1244527 | chr17_80280528_+ | intronic |
CAediting_1244528 | chr17_80280557_+ | intronic |
CAediting_1244529 | chr17_80280571_+ | intronic |
CAediting_1244530 | chr17_80280583_+ | intronic |
CAediting_1244531 | chr17_80280593_+ | intronic |
CAediting_1244532 | chr17_80280609_+ | intronic |
CAediting_1244533 | chr17_80280660_+ | intronic |
CAediting_1244534 | chr17_80280675_+ | intronic |
CAediting_1244535 | chr17_80280676_+ | intronic |
CAediting_1244536 | chr17_80280690_+ | intronic |
CAediting_1244537 | chr17_80280693_+ | intronic |
CAediting_1244538 | chr17_80280707_+ | intronic |
CAediting_1244539 | chr17_80280729_+ | intronic |
CAediting_1244540 | chr17_80282037_+ | intronic |
CAediting_1244541 | chr17_80282040_+ | intronic |
CAediting_1244542 | chr17_80282528_+ | intronic |
CAediting_1244543 | chr17_80282605_+ | intronic |
CAediting_1244544 | chr17_80282881_+ | intronic |
CAediting_1244545 | chr17_80284014_+ | intronic |
CAediting_1244546 | chr17_80284091_+ | intronic |
CAediting_1244547 | chr17_80284180_+ | intronic |
CAediting_1244548 | chr17_80284181_+ | intronic |
CAediting_1244549 | chr17_80284217_+ | intronic |
CAediting_1244550 | chr17_80284243_+ | intronic |
CAediting_1244551 | chr17_80284244_+ | intronic |
CAediting_1244552 | chr17_80284253_+ | intronic |
CAediting_1244553 | chr17_80284279_+ | intronic |
CAediting_1244554 | chr17_80284284_+ | intronic |
CAediting_1244555 | chr17_80284485_+ | intronic |
CAediting_1244556 | chr17_80284526_+ | intronic |
CAediting_1244557 | chr17_80285855_+ | intronic |
CAediting_1244558 | chr17_80285911_+ | intronic |
CAediting_1244559 | chr17_80285938_+ | intronic |
CAediting_1244560 | chr17_80287241_+ | intronic |
CAediting_1244561 | chr17_80287294_+ | intronic |
CAediting_1244562 | chr17_80287309_+ | intronic |
CAediting_1244563 | chr17_80287356_+ | intronic |
CAediting_1244564 | chr17_80287366_+ | intronic |
CAediting_1244565 | chr17_80287376_+ | intronic |
CAediting_1244566 | chr17_80287397_+ | intronic |
CAediting_1244567 | chr17_80287418_+ | intronic |
CAediting_1244568 | chr17_80287423_+ | intronic |
CAediting_1244569 | chr17_80287442_+ | intronic |
CAediting_1244570 | chr17_80292138_+ | ncRNA_intronic |
CAediting_1244571 | chr17_80292149_+ | ncRNA_intronic |
CAediting_1244572 | chr17_80292178_+ | ncRNA_intronic |
CAediting_1244573 | chr17_80292184_+ | ncRNA_intronic |
CAediting_1244574 | chr17_80292202_+ | ncRNA_intronic |
CAediting_1244575 | chr17_80292211_+ | ncRNA_intronic |
CAediting_1244576 | chr17_80292214_+ | ncRNA_intronic |
CAediting_1244577 | chr17_80292246_+ | ncRNA_intronic |
CAediting_1244578 | chr17_80292273_+ | ncRNA_intronic |
CAediting_1244579 | chr17_80292284_+ | ncRNA_intronic |
CAediting_1244580 | chr17_80292350_+ | ncRNA_intronic |
CAediting_1244581 | chr17_80293077_+ | ncRNA_intronic |
CAediting_1244582 | chr17_80293097_+ | ncRNA_intronic |
CAediting_1244583 | chr17_80293102_+ | ncRNA_intronic |
CAediting_1244584 | chr17_80293119_+ | ncRNA_intronic |
CAediting_1244585 | chr17_80293144_+ | ncRNA_intronic |
CAediting_1244586 | chr17_80293233_+ | ncRNA_intronic |
CAediting_1244587 | chr17_80293323_+ | ncRNA_intronic |
CAediting_1244588 | chr17_80293336_+ | ncRNA_intronic |
CAediting_1244589 | chr17_80293337_+ | ncRNA_intronic |
CAediting_1244590 | chr17_80293568_+ | ncRNA_intronic |
CAediting_1244591 | chr17_80293569_+ | ncRNA_intronic |
CAediting_1244592 | chr17_80293666_+ | ncRNA_intronic |
CAediting_1244593 | chr17_80293706_+ | ncRNA_intronic |
CAediting_1244594 | chr17_80293712_+ | ncRNA_intronic |
CAediting_1244595 | chr17_80293716_+ | ncRNA_intronic |
CAediting_1244596 | chr17_80293723_+ | ncRNA_intronic |
CAediting_1244597 | chr17_80293733_+ | ncRNA_intronic |
CAediting_1244598 | chr17_80293748_+ | ncRNA_intronic |
CAediting_1244599 | chr17_80293768_+ | ncRNA_intronic |
CAediting_1244600 | chr17_80293776_+ | ncRNA_intronic |
CAediting_1244601 | chr17_80293777_+ | ncRNA_intronic |
CAediting_1244602 | chr17_80296106_+ | ncRNA_intronic |
CAediting_1244603 | chr17_80296113_+ | ncRNA_intronic |
CAediting_1244604 | chr17_80296152_+ | ncRNA_intronic |
CAediting_1244605 | chr17_80296159_+ | ncRNA_intronic |
CAediting_1244606 | chr17_80296161_+ | ncRNA_intronic |
CAediting_1244607 | chr17_80296794_+ | ncRNA_intronic |
CAediting_1244608 | chr17_80296811_+ | ncRNA_intronic |
CAediting_1244609 | chr17_80297330_+ | ncRNA_intronic |
CAediting_1244610 | chr17_80297356_+ | ncRNA_intronic |
CAediting_1244611 | chr17_80297492_+ | ncRNA_intronic |
CAediting_1244612 | chr17_80297610_+ | ncRNA_intronic |
CAediting_1244613 | chr17_80297838_+ | ncRNA_intronic |
CAediting_1244614 | chr17_80298755_+ | ncRNA_exonic |
CAediting_1244615 | chr17_80298858_+ | ncRNA_intronic |
CAediting_1244616 | chr17_80298859_+ | ncRNA_intronic |
CAediting_1244617 | chr17_80298897_+ | ncRNA_intronic |
CAediting_1244618 | chr17_80298900_+ | ncRNA_intronic |
CAediting_1244619 | chr17_80298934_+ | ncRNA_intronic |
CAediting_1244620 | chr17_80298961_+ | ncRNA_intronic |
CAediting_1244621 | chr17_80300136_+ | ncRNA_intronic |
CAediting_1244622 | chr17_80300173_+ | ncRNA_intronic |
CAediting_1244623 | chr17_80300174_+ | ncRNA_intronic |
CAediting_1244624 | chr17_80300202_+ | ncRNA_intronic |
CAediting_1244625 | chr17_80300220_+ | ncRNA_intronic |
CAediting_1244626 | chr17_80300227_+ | ncRNA_intronic |
CAediting_1244627 | chr17_80300647_+ | ncRNA_intronic |
CAediting_1244628 | chr17_80300814_+ | ncRNA_intronic |
CAediting_1244629 | chr17_80301512_+ | ncRNA_intronic |
CAediting_1244630 | chr17_80301514_+ | ncRNA_intronic |
CAediting_1244631 | chr17_80301518_+ | ncRNA_intronic |
CAediting_1244632 | chr17_80301521_+ | ncRNA_intronic |
CAediting_1244633 | chr17_80301524_+ | ncRNA_intronic |
CAediting_1244634 | chr17_80301529_+ | ncRNA_intronic |
CAediting_1244635 | chr17_80301564_+ | ncRNA_intronic |
CAediting_1244636 | chr17_80301569_+ | ncRNA_intronic |
CAediting_1244637 | chr17_80301591_+ | ncRNA_intronic |
CAediting_1244638 | chr17_80301603_+ | ncRNA_intronic |
CAediting_1244639 | chr17_80301615_+ | ncRNA_intronic |
CAediting_1244640 | chr17_80301617_+ | ncRNA_intronic |
CAediting_1244641 | chr17_80301630_+ | ncRNA_intronic |
CAediting_1244642 | chr17_80301631_+ | ncRNA_intronic |
CAediting_1244643 | chr17_80301638_+ | ncRNA_intronic |
CAediting_1244644 | chr17_80301642_+ | ncRNA_intronic |
CAediting_1244645 | chr17_80301690_+ | ncRNA_intronic |
CAediting_1244646 | chr17_80301695_+ | ncRNA_intronic |
CAediting_1244647 | chr17_80301699_+ | ncRNA_intronic |
CAediting_1244648 | chr17_80301866_+ | ncRNA_intronic |
CAediting_1244649 | chr17_80301913_+ | ncRNA_intronic |
CAediting_1244650 | chr17_80301939_+ | ncRNA_intronic |
CAediting_1244651 | chr17_80301942_+ | ncRNA_intronic |
CAediting_1244652 | chr17_80301956_+ | ncRNA_intronic |
CAediting_1244653 | chr17_80301957_+ | ncRNA_intronic |
CAediting_1244654 | chr17_80301960_+ | ncRNA_intronic |
CAediting_1244655 | chr17_80301963_+ | ncRNA_intronic |
CAediting_1244656 | chr17_80302627_+ | ncRNA_intronic |
CAediting_1244657 | chr17_80303832_+ | ncRNA_intronic |
CAediting_1244658 | chr17_80304519_+ | ncRNA_intronic |
CAediting_1244659 | chr17_80305882_+ | ncRNA_intronic |
CAediting_1244660 | chr17_80306019_+ | ncRNA_intronic |
CAediting_1244661 | chr17_80306050_+ | ncRNA_intronic |
CAediting_1244662 | chr17_80306731_+ | ncRNA_intronic |
CAediting_1244663 | chr17_80309873_+ | ncRNA_intronic |
CAediting_1244664 | chr17_80309882_+ | ncRNA_intronic |
CAediting_1244665 | chr17_80309895_+ | ncRNA_intronic |
CAediting_1244666 | chr17_80309897_+ | ncRNA_intronic |
CAediting_1244667 | chr17_80309936_+ | ncRNA_intronic |
CAediting_1244668 | chr17_80309939_+ | ncRNA_intronic |
CAediting_1244669 | chr17_80309953_+ | ncRNA_intronic |
CAediting_1244670 | chr17_80309961_+ | ncRNA_intronic |
CAediting_1244671 | chr17_80310035_+ | ncRNA_intronic |
CAediting_1244672 | chr17_80311855_+ | ncRNA_intronic |
CAediting_1244673 | chr17_80311858_+ | ncRNA_intronic |
CAediting_1244674 | chr17_80311871_+ | ncRNA_intronic |
CAediting_1244675 | chr17_80311872_+ | ncRNA_intronic |
CAediting_1244676 | chr17_80311877_+ | ncRNA_intronic |
CAediting_1244677 | chr17_80311895_+ | ncRNA_intronic |
CAediting_1244678 | chr17_80311898_+ | ncRNA_intronic |
CAediting_1244679 | chr17_80311902_+ | ncRNA_intronic |
CAediting_1244680 | chr17_80311912_+ | ncRNA_intronic |
CAediting_1244681 | chr17_80311928_+ | ncRNA_intronic |
CAediting_1244682 | chr17_80311940_+ | ncRNA_intronic |
CAediting_1244683 | chr17_80311941_+ | ncRNA_intronic |
CAediting_1244684 | chr17_80311949_+ | ncRNA_intronic |
CAediting_1244685 | chr17_80311951_+ | ncRNA_intronic |
CAediting_1244686 | chr17_80311962_+ | ncRNA_intronic |
CAediting_1244687 | chr17_80311965_+ | ncRNA_intronic |
CAediting_1244688 | chr17_80311966_+ | ncRNA_intronic |
CAediting_1244689 | chr17_80311967_+ | ncRNA_intronic |
CAediting_1244690 | chr17_80311968_+ | ncRNA_intronic |
CAediting_1244691 | chr17_80311969_+ | ncRNA_intronic |
CAediting_1244692 | chr17_80311970_+ | ncRNA_intronic |
CAediting_1244693 | chr17_80311972_+ | ncRNA_intronic |
CAediting_1244694 | chr17_80311975_+ | ncRNA_intronic |
CAediting_1244695 | chr17_80311976_+ | ncRNA_intronic |
CAediting_1244696 | chr17_80311977_+ | ncRNA_intronic |
CAediting_1244697 | chr17_80311978_+ | ncRNA_intronic |
CAediting_1244698 | chr17_80311981_+ | ncRNA_intronic |
CAediting_1244699 | chr17_80312001_+ | ncRNA_intronic |
CAediting_1244700 | chr17_80312007_+ | ncRNA_intronic |
CAediting_1244701 | chr17_80312008_+ | ncRNA_intronic |
CAediting_1244702 | chr17_80312013_+ | ncRNA_intronic |
CAediting_1244703 | chr17_80312024_+ | ncRNA_intronic |
CAediting_1244704 | chr17_80312030_+ | ncRNA_intronic |
CAediting_1244705 | chr17_80312031_+ | ncRNA_intronic |
CAediting_1244706 | chr17_80312043_+ | ncRNA_intronic |
CAediting_1244707 | chr17_80312077_+ | ncRNA_intronic |
CAediting_1244708 | chr17_80312078_+ | ncRNA_intronic |
CAediting_1244709 | chr17_80318713_+ | ncRNA_intronic |
CAediting_1244710 | chr17_80320371_+ | ncRNA_intronic |
CAediting_1244711 | chr17_80320373_+ | ncRNA_intronic |
CAediting_1244712 | chr17_80320377_+ | ncRNA_intronic |
CAediting_1244713 | chr17_80320383_+ | ncRNA_intronic |
CAediting_1244714 | chr17_80320408_+ | ncRNA_intronic |
CAediting_1244715 | chr17_80320417_+ | ncRNA_intronic |
CAediting_1244716 | chr17_80320427_+ | ncRNA_intronic |
CAediting_1244717 | chr17_80320432_+ | ncRNA_intronic |
CAediting_1244718 | chr17_80320453_+ | ncRNA_intronic |
CAediting_1244719 | chr17_80320470_+ | ncRNA_intronic |
CAediting_1244720 | chr17_80320479_+ | ncRNA_intronic |
CAediting_1244721 | chr17_80320548_+ | ncRNA_intronic |
CAediting_1244722 | chr17_80320570_+ | ncRNA_intronic |
CAediting_1244723 | chr17_80320573_+ | ncRNA_intronic |
CAediting_1244724 | chr17_80320575_+ | ncRNA_intronic |
CAediting_1244725 | chr17_80320579_+ | ncRNA_intronic |
CAediting_1244726 | chr17_80320590_+ | ncRNA_intronic |
CAediting_1244727 | chr17_80320599_+ | ncRNA_intronic |
CAediting_1244728 | chr17_80320651_+ | ncRNA_intronic |
CAediting_1244729 | chr17_80320659_+ | ncRNA_intronic |
CAediting_1244730 | chr17_80320661_+ | ncRNA_intronic |
CAediting_1244731 | chr17_80320664_+ | ncRNA_intronic |
CAediting_1244732 | chr17_80320666_+ | ncRNA_intronic |
CAediting_1244733 | chr17_80320673_+ | ncRNA_intronic |
CAediting_1244734 | chr17_80320677_+ | ncRNA_intronic |
CAediting_1244735 | chr17_80320725_+ | ncRNA_intronic |
CAediting_1244736 | chr17_80320735_+ | ncRNA_intronic |
CAediting_1244737 | chr17_80320743_+ | ncRNA_intronic |
CAediting_1244738 | chr17_80320744_+ | ncRNA_intronic |
CAediting_1244739 | chr17_80320747_+ | ncRNA_intronic |
CAediting_1244740 | chr17_80320765_+ | ncRNA_intronic |
CAediting_1244741 | chr17_80320779_+ | ncRNA_intronic |
CAediting_1244742 | chr17_80320789_+ | ncRNA_intronic |
CAediting_1244743 | chr17_80320791_+ | ncRNA_intronic |
CAediting_1244744 | chr17_80320793_+ | ncRNA_intronic |
CAediting_1244745 | chr17_80320797_+ | ncRNA_intronic |
CAediting_1244746 | chr17_80320821_+ | ncRNA_intronic |
CAediting_1244747 | chr17_80320826_+ | ncRNA_intronic |
CAediting_1244748 | chr17_80320828_+ | ncRNA_intronic |
CAediting_1244749 | chr17_80320831_+ | ncRNA_intronic |
CAediting_1244750 | chr17_80320832_+ | ncRNA_intronic |
CAediting_1244751 | chr17_80320840_+ | ncRNA_intronic |
CAediting_1244752 | chr17_80320844_+ | ncRNA_intronic |
CAediting_1244753 | chr17_80320848_+ | ncRNA_intronic |
CAediting_1244754 | chr17_80320872_+ | ncRNA_intronic |
CAediting_1244755 | chr17_80320876_+ | ncRNA_intronic |
CAediting_1244756 | chr17_80320883_+ | ncRNA_intronic |
CAediting_1244757 | chr17_80320889_+ | ncRNA_intronic |
CAediting_1244758 | chr17_80320896_+ | ncRNA_intronic |
CAediting_1244759 | chr17_80320915_+ | ncRNA_intronic |
CAediting_1244760 | chr17_80320920_+ | ncRNA_intronic |
CAediting_1244761 | chr17_80320921_+ | ncRNA_intronic |
CAediting_1244762 | chr17_80320925_+ | ncRNA_intronic |
CAediting_1244763 | chr17_80320928_+ | ncRNA_intronic |
CAediting_1244764 | chr17_80320932_+ | ncRNA_intronic |
CAediting_1244765 | chr17_80320936_+ | ncRNA_intronic |
CAediting_1244766 | chr17_80320939_+ | ncRNA_intronic |
CAediting_1244767 | chr17_80320942_+ | ncRNA_intronic |
CAediting_1244768 | chr17_80320944_+ | ncRNA_intronic |
CAediting_1244769 | chr17_80320947_+ | ncRNA_intronic |
CAediting_1244770 | chr17_80320952_+ | ncRNA_intronic |
CAediting_1244771 | chr17_80320957_+ | ncRNA_intronic |
CAediting_1244772 | chr17_80320958_+ | ncRNA_intronic |
CAediting_1244773 | chr17_80320967_+ | ncRNA_intronic |
CAediting_1244774 | chr17_80320969_+ | ncRNA_intronic |
CAediting_1244775 | chr17_80320971_+ | ncRNA_intronic |
CAediting_1244776 | chr17_80320974_+ | ncRNA_intronic |
CAediting_1244777 | chr17_80320975_+ | ncRNA_intronic |
CAediting_1244778 | chr17_80320987_+ | ncRNA_intronic |
CAediting_1244779 | chr17_80320988_+ | ncRNA_intronic |
CAediting_1244780 | chr17_80320989_+ | ncRNA_intronic |
CAediting_1244781 | chr17_80320990_+ | ncRNA_intronic |
CAediting_1244782 | chr17_80320991_+ | ncRNA_intronic |
CAediting_1244783 | chr17_80321001_+ | ncRNA_intronic |
CAediting_1244784 | chr17_80321763_+ | ncRNA_intronic |
CAediting_1244785 | chr17_80321767_+ | ncRNA_intronic |
CAediting_1244786 | chr17_80321779_+ | ncRNA_intronic |
CAediting_1244787 | chr17_80321825_+ | ncRNA_intronic |
CAediting_1244788 | chr17_80321900_+ | ncRNA_intronic |
CAediting_1244789 | chr17_80322200_+ | ncRNA_intronic |
CAediting_1244790 | chr17_80322214_+ | ncRNA_intronic |
CAediting_1244791 | chr17_80322222_+ | ncRNA_intronic |
CAediting_1244792 | chr17_80322238_+ | ncRNA_intronic |
CAediting_1244793 | chr17_80322293_+ | ncRNA_intronic |
CAediting_1244794 | chr17_80322300_+ | ncRNA_intronic |
CAediting_1244795 | chr17_80322302_+ | ncRNA_intronic |
CAediting_1244796 | chr17_80322399_+ | ncRNA_intronic |
CAediting_1244797 | chr17_80322455_+ | ncRNA_intronic |
CAediting_1244798 | chr17_80322483_+ | ncRNA_intronic |
CAediting_1244799 | chr17_80322517_+ | ncRNA_intronic |
CAediting_1244800 | chr17_80322526_+ | ncRNA_intronic |
CAediting_1244801 | chr17_80322541_+ | ncRNA_intronic |
CAediting_1244802 | chr17_80322598_+ | ncRNA_intronic |
CAediting_1244803 | chr17_80323575_+ | ncRNA_intronic |
CAediting_1244804 | chr17_80323589_+ | ncRNA_intronic |
CAediting_1244805 | chr17_80323604_+ | ncRNA_intronic |
CAediting_1244806 | chr17_80329567_+ | ncRNA_intronic |
CAediting_1244807 | chr17_80329595_+ | ncRNA_intronic |
CAediting_1244808 | chr17_80329596_+ | ncRNA_intronic |
CAediting_1244809 | chr17_80329647_+ | ncRNA_intronic |
CAediting_1244810 | chr17_80329651_+ | ncRNA_intronic |
CAediting_1244811 | chr17_80329710_+ | ncRNA_intronic |
CAediting_1244812 | chr17_80329751_+ | ncRNA_intronic |
CAediting_1244813 | chr17_80330952_+ | ncRNA_intronic |
CAediting_1244814 | chr17_80330957_+ | ncRNA_intronic |
CAediting_1244815 | chr17_80330983_+ | ncRNA_intronic |
CAediting_1244816 | chr17_80331071_+ | ncRNA_intronic |
CAediting_1244817 | chr17_80331458_+ | ncRNA_intronic |
CAediting_1244818 | chr17_80331572_+ | ncRNA_intronic |
CAediting_1244819 | chr17_80333586_+ | ncRNA_intronic |
CAediting_1244820 | chr17_80333588_+ | ncRNA_intronic |
CAediting_1244821 | chr17_80334646_+ | ncRNA_intronic |
CAediting_1244822 | chr17_80334650_+ | ncRNA_intronic |
CAediting_1244823 | chr17_80334707_+ | ncRNA_intronic |
CAediting_1244824 | chr17_80334768_+ | ncRNA_intronic |
CAediting_1244825 | chr17_80334792_+ | ncRNA_intronic |
CAediting_1244826 | chr17_80334811_+ | ncRNA_intronic |
CAediting_1244827 | chr17_80334833_+ | ncRNA_intronic |
CAediting_1244828 | chr17_80334837_+ | ncRNA_intronic |
CAediting_1244829 | chr17_80334888_+ | ncRNA_intronic |
CAediting_1244830 | chr17_80336757_+ | ncRNA_exonic |
CAediting_1244831 | chr17_80336761_+ | ncRNA_exonic |
CAediting_1244832 | chr17_80336783_+ | ncRNA_exonic |
CAediting_1244833 | chr17_80336784_+ | ncRNA_exonic |
CAediting_1244834 | chr17_80336808_+ | ncRNA_exonic |
CAediting_1244835 | chr17_80336910_+ | intronic |
CAediting_1244836 | chr17_80336911_+ | intronic |
CAediting_1244837 | chr17_80336912_+ | intronic |
CAediting_1244838 | chr17_80336913_+ | intronic |
CAediting_1244839 | chr17_80336915_+ | intronic |
CAediting_1244840 | chr17_80336916_+ | intronic |
CAediting_1244841 | chr17_80336918_+ | intronic |
CAediting_1244842 | chr17_80340836_+ | ncRNA_exonic |
CAediting_1244843 | chr17_80340858_+ | ncRNA_exonic |
CAediting_1244844 | chr17_80340931_+ | ncRNA_exonic |
CAediting_1244845 | chr17_80340938_+ | ncRNA_exonic |
CAediting_1244846 | chr17_80341591_+ | ncRNA_exonic |
CAediting_1244847 | chr17_80341599_+ | ncRNA_exonic |
CAediting_1244848 | chr17_80341630_+ | ncRNA_exonic |
CAediting_1244849 | chr17_80341658_+ | ncRNA_exonic |
CAediting_1244850 | chr17_80341663_+ | ncRNA_exonic |
CAediting_1244851 | chr17_80341664_+ | ncRNA_exonic |
CAediting_1244852 | chr17_80341690_+ | ncRNA_exonic |
CAediting_1244853 | chr17_80341693_+ | ncRNA_exonic |
CAediting_1244854 | chr17_80341713_+ | ncRNA_exonic |
CAediting_1244855 | chr17_80341725_+ | ncRNA_exonic |
CAediting_1244856 | chr17_80341726_+ | ncRNA_exonic |
CAediting_1244857 | chr17_80341838_+ | ncRNA_exonic |
CAediting_1244858 | chr17_80341936_+ | ncRNA_exonic |
CAediting_1244859 | chr17_80351461_+ | intronic |
Repat-regional RNA editing(s). |
CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_1244431 | chr17_80265788_+ | LTR | ERVL | ERVL-B4-int |
CAediting_1244432 | chr17_80265837_+ | SINE | Alu | FLAM_C |
CAediting_1244433 | chr17_80265850_+ | SINE | Alu | FLAM_C |
CAediting_1244434 | chr17_80265860_+ | SINE | Alu | FLAM_C |
CAediting_1244435 | chr17_80266178_+ | SINE | Alu | AluJb |
CAediting_1244436 | chr17_80266186_+ | SINE | Alu | AluJb |
CAediting_1244437 | chr17_80266217_+ | SINE | Alu | AluJb |
CAediting_1244438 | chr17_80266252_+ | SINE | Alu | AluJb |
CAediting_1244439 | chr17_80266329_+ | SINE | Alu | AluJb |
CAediting_1244440 | chr17_80266334_+ | SINE | Alu | AluJb |
CAediting_1244441 | chr17_80266343_+ | SINE | Alu | AluJb |
CAediting_1244442 | chr17_80266358_+ | SINE | Alu | AluJb |
CAediting_1244443 | chr17_80266525_+ | SINE | Alu | AluSz |
CAediting_1244444 | chr17_80266545_+ | SINE | Alu | AluSz |
CAediting_1244445 | chr17_80266566_+ | SINE | Alu | AluSz |
CAediting_1244446 | chr17_80266571_+ | SINE | Alu | AluSz |
CAediting_1244447 | chr17_80266576_+ | SINE | Alu | AluSz |
CAediting_1244448 | chr17_80266581_+ | SINE | Alu | AluSz |
CAediting_1244449 | chr17_80266595_+ | SINE | Alu | AluSz |
CAediting_1244450 | chr17_80266619_+ | SINE | Alu | AluSz |
CAediting_1244451 | chr17_80266628_+ | SINE | Alu | AluSz |
CAediting_1244452 | chr17_80266631_+ | SINE | Alu | AluSz |
CAediting_1244453 | chr17_80266638_+ | SINE | Alu | AluSz |
CAediting_1244454 | chr17_80266641_+ | SINE | Alu | AluSz |
CAediting_1244455 | chr17_80266650_+ | SINE | Alu | AluSz |
CAediting_1244456 | chr17_80266674_+ | SINE | Alu | AluSz |
CAediting_1244457 | chr17_80266682_+ | SINE | Alu | AluSz |
CAediting_1244458 | chr17_80266685_+ | SINE | Alu | AluSz |
CAediting_1244459 | chr17_80266711_+ | SINE | Alu | AluSz |
CAediting_1244460 | chr17_80266722_+ | SINE | Alu | AluSz |
CAediting_1244461 | chr17_80266723_+ | SINE | Alu | AluSz |
CAediting_1244462 | chr17_80266724_+ | SINE | Alu | AluSz |
CAediting_1244463 | chr17_80266736_+ | SINE | Alu | AluSz |
CAediting_1244464 | chr17_80266737_+ | SINE | Alu | AluSz |
CAediting_1244465 | chr17_80266764_+ | SINE | Alu | AluSz |
CAediting_1244466 | chr17_80266988_+ | SINE | Alu | AluSx |
CAediting_1244467 | chr17_80266997_+ | SINE | Alu | AluSx |
CAediting_1244468 | chr17_80267007_+ | SINE | Alu | AluSx |
CAediting_1244469 | chr17_80267097_+ | SINE | Alu | AluSx |
CAediting_1244470 | chr17_80267126_+ | SINE | Alu | AluSx |
CAediting_1244471 | chr17_80267137_+ | SINE | Alu | AluSx |
CAediting_1244472 | chr17_80267138_+ | SINE | Alu | AluSx |
CAediting_1244473 | chr17_80267142_+ | SINE | Alu | AluSx |
CAediting_1244474 | chr17_80267264_+ | SINE | Alu | AluSc |
CAediting_1244475 | chr17_80267265_+ | SINE | Alu | AluSc |
CAediting_1244476 | chr17_80267288_+ | SINE | Alu | AluSc |
CAediting_1244477 | chr17_80267294_+ | SINE | Alu | AluSc |
CAediting_1244478 | chr17_80267326_+ | SINE | Alu | AluSc |
CAediting_1244479 | chr17_80267330_+ | SINE | Alu | AluSc |
CAediting_1244480 | chr17_80267363_+ | SINE | Alu | AluSc |
CAediting_1244481 | chr17_80267364_+ | SINE | Alu | AluSc |
CAediting_1244482 | chr17_80267368_+ | SINE | Alu | AluSc |
CAediting_1244483 | chr17_80267384_+ | SINE | Alu | AluSc |
CAediting_1244484 | chr17_80267437_+ | SINE | Alu | AluSc |
CAediting_1244485 | chr17_80267949_+ | SINE | Alu | AluSz |
CAediting_1244486 | chr17_80267986_+ | SINE | Alu | AluSz |
CAediting_1244487 | chr17_80267988_+ | SINE | Alu | AluSz |
CAediting_1244488 | chr17_80268003_+ | SINE | Alu | AluSz |
CAediting_1244489 | chr17_80268009_+ | SINE | Alu | AluSz |
CAediting_1244490 | chr17_80268025_+ | SINE | Alu | AluSz |
CAediting_1244491 | chr17_80268055_+ | SINE | Alu | AluSz |
CAediting_1244492 | chr17_80268274_+ | SINE | Alu | AluJb |
CAediting_1244493 | chr17_80272164_+ | SINE | Alu | AluSg7 |
CAediting_1244494 | chr17_80273759_+ | SINE | Alu | AluSq |
CAediting_1244495 | chr17_80275731_+ | SINE | Alu | AluSx3 |
CAediting_1244496 | chr17_80275802_+ | SINE | Alu | AluSx3 |
CAediting_1244497 | chr17_80276149_+ | SINE | Alu | AluSp |
CAediting_1244498 | chr17_80276791_+ | SINE | Alu | AluSc5 |
CAediting_1244499 | chr17_80276841_+ | SINE | Alu | AluSc5 |
CAediting_1244500 | chr17_80276865_+ | SINE | Alu | AluSc5 |
CAediting_1244501 | chr17_80276867_+ | SINE | Alu | AluSc5 |
CAediting_1244502 | chr17_80276875_+ | SINE | Alu | AluSc5 |
CAediting_1244503 | chr17_80276910_+ | SINE | Alu | AluSc5 |
CAediting_1244504 | chr17_80276937_+ | SINE | Alu | AluSc5 |
CAediting_1244505 | chr17_80276959_+ | SINE | Alu | AluSc5 |
CAediting_1244506 | chr17_80276963_+ | SINE | Alu | AluSc5 |
CAediting_1244507 | chr17_80277342_+ | SINE | Alu | AluSz |
CAediting_1244508 | chr17_80277343_+ | SINE | Alu | AluSz |
CAediting_1244509 | chr17_80277403_+ | SINE | Alu | AluSz |
CAediting_1244510 | chr17_80277411_+ | SINE | Alu | AluSz |
CAediting_1244511 | chr17_80277412_+ | SINE | Alu | AluSz |
CAediting_1244512 | chr17_80277414_+ | SINE | Alu | AluSz |
CAediting_1244513 | chr17_80277422_+ | SINE | Alu | AluSz |
CAediting_1244514 | chr17_80277439_+ | SINE | Alu | AluSz |
CAediting_1244515 | chr17_80277442_+ | SINE | Alu | AluSz |
CAediting_1244516 | chr17_80277445_+ | SINE | Alu | AluSz |
CAediting_1244517 | chr17_80277447_+ | SINE | Alu | AluSz |
CAediting_1244518 | chr17_80277451_+ | SINE | Alu | AluSz |
CAediting_1244519 | chr17_80277477_+ | SINE | Alu | AluSz |
CAediting_1244520 | chr17_80277478_+ | SINE | Alu | AluSz |
CAediting_1244521 | chr17_80277487_+ | SINE | Alu | AluSz |
CAediting_1244522 | chr17_80277491_+ | SINE | Alu | AluSz |
CAediting_1244523 | chr17_80277494_+ | SINE | Alu | AluSz |
CAediting_1244524 | chr17_80277504_+ | SINE | Alu | AluSz |
CAediting_1244525 | chr17_80277519_+ | SINE | Alu | AluSz |
CAediting_1244526 | chr17_80277543_+ | SINE | Alu | AluSz |
CAediting_1244527 | chr17_80280528_+ | SINE | Alu | AluJo |
CAediting_1244528 | chr17_80280557_+ | SINE | Alu | AluJo |
CAediting_1244529 | chr17_80280571_+ | SINE | Alu | AluJo |
CAediting_1244530 | chr17_80280583_+ | SINE | Alu | AluJo |
CAediting_1244531 | chr17_80280593_+ | SINE | Alu | AluJo |
CAediting_1244532 | chr17_80280609_+ | SINE | Alu | AluJo |
CAediting_1244533 | chr17_80280660_+ | SINE | Alu | AluJo |
CAediting_1244534 | chr17_80280675_+ | SINE | Alu | AluJo |
CAediting_1244535 | chr17_80280676_+ | SINE | Alu | AluJo |
CAediting_1244536 | chr17_80280690_+ | SINE | Alu | AluJo |
CAediting_1244537 | chr17_80280693_+ | SINE | Alu | AluJo |
CAediting_1244538 | chr17_80280707_+ | SINE | Alu | AluJo |
CAediting_1244539 | chr17_80280729_+ | SINE | Alu | AluJo |
CAediting_1244540 | chr17_80282037_+ | SINE | Alu | AluSx1 |
CAediting_1244541 | chr17_80282040_+ | SINE | Alu | AluSx1 |
CAediting_1244542 | chr17_80282528_+ | SINE | Alu | AluY |
CAediting_1244543 | chr17_80282605_+ | SINE | Alu | AluY |
CAediting_1244544 | chr17_80282881_+ | SINE | Alu | AluSx |
CAediting_1244545 | chr17_80284014_+ | SINE | Alu | AluSx |
CAediting_1244546 | chr17_80284091_+ | SINE | Alu | AluSq2 |
CAediting_1244547 | chr17_80284180_+ | SINE | Alu | AluSq2 |
CAediting_1244548 | chr17_80284181_+ | SINE | Alu | AluSq2 |
CAediting_1244549 | chr17_80284217_+ | SINE | Alu | AluSq2 |
CAediting_1244550 | chr17_80284243_+ | SINE | Alu | AluSq2 |
CAediting_1244551 | chr17_80284244_+ | SINE | Alu | AluSq2 |
CAediting_1244552 | chr17_80284253_+ | SINE | Alu | AluSq2 |
CAediting_1244553 | chr17_80284279_+ | SINE | Alu | AluSq2 |
CAediting_1244554 | chr17_80284284_+ | SINE | Alu | AluSq2 |
CAediting_1244555 | chr17_80284485_+ | SINE | Alu | AluSx |
CAediting_1244556 | chr17_80284526_+ | SINE | Alu | AluSx |
CAediting_1244557 | chr17_80285855_+ | SINE | Alu | AluSx1 |
CAediting_1244558 | chr17_80285911_+ | SINE | Alu | AluSx1 |
CAediting_1244559 | chr17_80285938_+ | SINE | Alu | AluSx1 |
CAediting_1244560 | chr17_80287241_+ | SINE | Alu | AluJb |
CAediting_1244561 | chr17_80287294_+ | SINE | Alu | AluJb |
CAediting_1244562 | chr17_80287309_+ | SINE | Alu | AluJb |
CAediting_1244563 | chr17_80287356_+ | SINE | Alu | AluJb |
CAediting_1244564 | chr17_80287366_+ | SINE | Alu | AluJb |
CAediting_1244565 | chr17_80287376_+ | SINE | Alu | AluJb |
CAediting_1244566 | chr17_80287397_+ | SINE | Alu | AluJb |
CAediting_1244567 | chr17_80287418_+ | SINE | Alu | AluJb |
CAediting_1244568 | chr17_80287423_+ | SINE | Alu | AluJb |
CAediting_1244569 | chr17_80287442_+ | SINE | Alu | AluJb |
CAediting_1244570 | chr17_80292138_+ | SINE | Alu | AluSx1 |
CAediting_1244571 | chr17_80292149_+ | SINE | Alu | AluSx1 |
CAediting_1244572 | chr17_80292178_+ | SINE | Alu | AluSx1 |
CAediting_1244573 | chr17_80292184_+ | SINE | Alu | AluSx1 |
CAediting_1244574 | chr17_80292202_+ | SINE | Alu | AluSx1 |
CAediting_1244575 | chr17_80292211_+ | SINE | Alu | AluSx1 |
CAediting_1244576 | chr17_80292214_+ | SINE | Alu | AluSx1 |
CAediting_1244577 | chr17_80292246_+ | SINE | Alu | AluSx1 |
CAediting_1244578 | chr17_80292273_+ | SINE | Alu | AluSx1 |
CAediting_1244579 | chr17_80292284_+ | SINE | Alu | AluSx1 |
CAediting_1244580 | chr17_80292350_+ | SINE | Alu | AluSx1 |
CAediting_1244581 | chr17_80293077_+ | SINE | Alu | AluJr |
CAediting_1244582 | chr17_80293097_+ | SINE | Alu | AluJr |
CAediting_1244583 | chr17_80293102_+ | SINE | Alu | AluJr |
CAediting_1244584 | chr17_80293119_+ | SINE | Alu | AluJr |
CAediting_1244585 | chr17_80293144_+ | SINE | Alu | AluJr |
CAediting_1244586 | chr17_80293233_+ | SINE | Alu | AluJr |
CAediting_1244587 | chr17_80293323_+ | SINE | Alu | AluJr |
CAediting_1244588 | chr17_80293336_+ | SINE | Alu | AluJr |
CAediting_1244589 | chr17_80293337_+ | SINE | Alu | AluJr |
CAediting_1244590 | chr17_80293568_+ | SINE | Alu | AluY |
CAediting_1244591 | chr17_80293569_+ | SINE | Alu | AluY |
CAediting_1244592 | chr17_80293666_+ | SINE | Alu | AluY |
CAediting_1244593 | chr17_80293706_+ | SINE | Alu | AluY |
CAediting_1244594 | chr17_80293712_+ | SINE | Alu | AluY |
CAediting_1244595 | chr17_80293716_+ | SINE | Alu | AluY |
CAediting_1244596 | chr17_80293723_+ | SINE | Alu | AluY |
CAediting_1244597 | chr17_80293733_+ | SINE | Alu | AluY |
CAediting_1244598 | chr17_80293748_+ | SINE | Alu | AluY |
CAediting_1244599 | chr17_80293768_+ | SINE | Alu | AluY |
CAediting_1244600 | chr17_80293776_+ | SINE | Alu | AluY |
CAediting_1244601 | chr17_80293777_+ | SINE | Alu | AluY |
CAediting_1244602 | chr17_80296106_+ | SINE | Alu | AluSz |
CAediting_1244603 | chr17_80296113_+ | SINE | Alu | AluSz |
CAediting_1244604 | chr17_80296152_+ | SINE | Alu | AluSz |
CAediting_1244605 | chr17_80296159_+ | SINE | Alu | AluSz |
CAediting_1244606 | chr17_80296161_+ | SINE | Alu | AluSz |
CAediting_1244607 | chr17_80296794_+ | SINE | Alu | AluJb |
CAediting_1244608 | chr17_80296811_+ | SINE | Alu | AluJb |
CAediting_1244609 | chr17_80297330_+ | SINE | Alu | AluSg |
CAediting_1244610 | chr17_80297356_+ | SINE | Alu | AluSg |
CAediting_1244611 | chr17_80297492_+ | SINE | Alu | AluY |
CAediting_1244612 | chr17_80297610_+ | SINE | Alu | AluY |
CAediting_1244613 | chr17_80297838_+ | SINE | Alu | AluJr4 |
CAediting_1244614 | chr17_80298755_+ | SINE | Alu | AluSx |
CAediting_1244615 | chr17_80298858_+ | SINE | Alu | AluSx |
CAediting_1244616 | chr17_80298859_+ | SINE | Alu | AluSx |
CAediting_1244617 | chr17_80298897_+ | SINE | Alu | AluSx |
CAediting_1244618 | chr17_80298900_+ | SINE | Alu | AluSx |
CAediting_1244619 | chr17_80298934_+ | SINE | Alu | AluSx |
CAediting_1244620 | chr17_80298961_+ | SINE | Alu | AluSx |
CAediting_1244621 | chr17_80300136_+ | LINE | L1 | L1PA13 |
CAediting_1244622 | chr17_80300173_+ | LINE | L1 | L1PA13 |
CAediting_1244623 | chr17_80300174_+ | LINE | L1 | L1PA13 |
CAediting_1244624 | chr17_80300202_+ | LINE | L1 | L1PA13 |
CAediting_1244625 | chr17_80300220_+ | LINE | L1 | L1PA13 |
CAediting_1244626 | chr17_80300227_+ | LINE | L1 | L1PA13 |
CAediting_1244627 | chr17_80300647_+ | SINE | Alu | AluSx1 |
CAediting_1244628 | chr17_80300814_+ | SINE | Alu | AluSx1 |
CAediting_1244629 | chr17_80301512_+ | LINE | L1 | L1MA5 |
CAediting_1244630 | chr17_80301514_+ | LINE | L1 | L1MA5 |
CAediting_1244631 | chr17_80301518_+ | LINE | L1 | L1MA5 |
CAediting_1244632 | chr17_80301521_+ | LINE | L1 | L1MA5 |
CAediting_1244633 | chr17_80301524_+ | LINE | L1 | L1MA5 |
CAediting_1244634 | chr17_80301529_+ | LINE | L1 | L1MA5 |
CAediting_1244635 | chr17_80301564_+ | LINE | L1 | L1MA5 |
CAediting_1244636 | chr17_80301569_+ | LINE | L1 | L1MA5 |
CAediting_1244637 | chr17_80301591_+ | LINE | L1 | L1MA5 |
CAediting_1244638 | chr17_80301603_+ | LINE | L1 | L1MA5 |
CAediting_1244639 | chr17_80301615_+ | LINE | L1 | L1MA5 |
CAediting_1244640 | chr17_80301617_+ | LINE | L1 | L1MA5 |
CAediting_1244641 | chr17_80301630_+ | LINE | L1 | L1MA5 |
CAediting_1244642 | chr17_80301631_+ | LINE | L1 | L1MA5 |
CAediting_1244643 | chr17_80301638_+ | LINE | L1 | L1MA5 |
CAediting_1244644 | chr17_80301642_+ | LINE | L1 | L1MA5 |
CAediting_1244645 | chr17_80301690_+ | LINE | L1 | L1MA5 |
CAediting_1244646 | chr17_80301695_+ | LINE | L1 | L1MA5 |
CAediting_1244647 | chr17_80301699_+ | LINE | L1 | L1MA5 |
CAediting_1244648 | chr17_80301866_+ | LINE | L1 | L1MA5 |
CAediting_1244649 | chr17_80301913_+ | LINE | L1 | L1MA5 |
CAediting_1244650 | chr17_80301939_+ | LINE | L1 | L1MA5 |
CAediting_1244651 | chr17_80301942_+ | LINE | L1 | L1MA5 |
CAediting_1244652 | chr17_80301956_+ | LINE | L1 | L1MA5 |
CAediting_1244653 | chr17_80301957_+ | LINE | L1 | L1MA5 |
CAediting_1244654 | chr17_80301960_+ | LINE | L1 | L1MA5 |
CAediting_1244655 | chr17_80301963_+ | LINE | L1 | L1MA5 |
CAediting_1244656 | chr17_80302627_+ | SINE | Alu | AluJr |
CAediting_1244657 | chr17_80303832_+ | SINE | Alu | AluSz6 |
CAediting_1244658 | chr17_80304519_+ | SINE | Alu | AluY |
CAediting_1244659 | chr17_80305882_+ | SINE | Alu | AluSz |
CAediting_1244660 | chr17_80306019_+ | SINE | Alu | AluJo |
CAediting_1244661 | chr17_80306050_+ | SINE | Alu | AluJo |
CAediting_1244662 | chr17_80306731_+ | SINE | Alu | AluY |
CAediting_1244663 | chr17_80309873_+ | SINE | Alu | AluYm1 |
CAediting_1244664 | chr17_80309882_+ | SINE | Alu | AluYm1 |
CAediting_1244665 | chr17_80309895_+ | SINE | Alu | AluYm1 |
CAediting_1244666 | chr17_80309897_+ | SINE | Alu | AluYm1 |
CAediting_1244667 | chr17_80309936_+ | SINE | Alu | AluYm1 |
CAediting_1244668 | chr17_80309939_+ | SINE | Alu | AluYm1 |
CAediting_1244669 | chr17_80309953_+ | SINE | Alu | AluYm1 |
CAediting_1244670 | chr17_80309961_+ | SINE | Alu | AluYm1 |
CAediting_1244671 | chr17_80310035_+ | SINE | Alu | AluYm1 |
CAediting_1244672 | chr17_80311855_+ | SINE | Alu | AluSx |
CAediting_1244673 | chr17_80311858_+ | SINE | Alu | AluSx |
CAediting_1244674 | chr17_80311871_+ | SINE | Alu | AluSx |
CAediting_1244675 | chr17_80311872_+ | SINE | Alu | AluSx |
CAediting_1244676 | chr17_80311877_+ | SINE | Alu | AluSx |
CAediting_1244677 | chr17_80311895_+ | SINE | Alu | AluSx |
CAediting_1244678 | chr17_80311898_+ | SINE | Alu | AluSx |
CAediting_1244679 | chr17_80311902_+ | SINE | Alu | AluSx |
CAediting_1244680 | chr17_80311912_+ | SINE | Alu | AluSx |
CAediting_1244681 | chr17_80311928_+ | SINE | Alu | AluSx |
CAediting_1244682 | chr17_80311940_+ | SINE | Alu | AluSx |
CAediting_1244683 | chr17_80311941_+ | SINE | Alu | AluSx |
CAediting_1244684 | chr17_80311949_+ | SINE | Alu | AluSx |
CAediting_1244685 | chr17_80311951_+ | SINE | Alu | AluSx |
CAediting_1244686 | chr17_80311962_+ | SINE | Alu | AluSx |
CAediting_1244687 | chr17_80311965_+ | SINE | Alu | AluSx |
CAediting_1244688 | chr17_80311966_+ | SINE | Alu | AluSx |
CAediting_1244689 | chr17_80311967_+ | SINE | Alu | AluSx |
CAediting_1244690 | chr17_80311968_+ | SINE | Alu | AluSx |
CAediting_1244691 | chr17_80311969_+ | SINE | Alu | AluSx |
CAediting_1244692 | chr17_80311970_+ | SINE | Alu | AluSx |
CAediting_1244693 | chr17_80311972_+ | SINE | Alu | AluSx |
CAediting_1244694 | chr17_80311975_+ | SINE | Alu | AluSx |
CAediting_1244695 | chr17_80311976_+ | SINE | Alu | AluSx |
CAediting_1244696 | chr17_80311977_+ | SINE | Alu | AluSx |
CAediting_1244697 | chr17_80311978_+ | SINE | Alu | AluSx |
CAediting_1244698 | chr17_80311981_+ | SINE | Alu | AluSx |
CAediting_1244699 | chr17_80312001_+ | SINE | Alu | AluSx |
CAediting_1244700 | chr17_80312007_+ | SINE | Alu | AluSx |
CAediting_1244701 | chr17_80312008_+ | SINE | Alu | AluSx |
CAediting_1244702 | chr17_80312013_+ | SINE | Alu | AluSx |
CAediting_1244703 | chr17_80312024_+ | SINE | Alu | AluSx |
CAediting_1244704 | chr17_80312030_+ | SINE | Alu | AluSx |
CAediting_1244705 | chr17_80312031_+ | SINE | Alu | AluSx |
CAediting_1244706 | chr17_80312043_+ | SINE | Alu | AluSx |
CAediting_1244707 | chr17_80312077_+ | SINE | Alu | AluSx |
CAediting_1244708 | chr17_80312078_+ | SINE | Alu | AluSx |
CAediting_1244709 | chr17_80318713_+ | SINE | Alu | AluY |
CAediting_1244710 | chr17_80320371_+ | SINE | Alu | AluSp |
CAediting_1244711 | chr17_80320373_+ | SINE | Alu | AluSp |
CAediting_1244712 | chr17_80320377_+ | SINE | Alu | AluSp |
CAediting_1244713 | chr17_80320383_+ | SINE | Alu | AluSp |
CAediting_1244714 | chr17_80320408_+ | SINE | Alu | AluSp |
CAediting_1244715 | chr17_80320417_+ | SINE | Alu | AluSp |
CAediting_1244716 | chr17_80320427_+ | SINE | Alu | AluSp |
CAediting_1244717 | chr17_80320432_+ | SINE | Alu | AluSp |
CAediting_1244718 | chr17_80320453_+ | SINE | Alu | AluSp |
CAediting_1244719 | chr17_80320470_+ | SINE | Alu | AluSp |
CAediting_1244720 | chr17_80320479_+ | SINE | Alu | AluSp |
CAediting_1244721 | chr17_80320548_+ | SINE | Alu | AluSp |
CAediting_1244722 | chr17_80320570_+ | SINE | Alu | AluSp |
CAediting_1244723 | chr17_80320573_+ | SINE | Alu | AluSp |
CAediting_1244724 | chr17_80320575_+ | SINE | Alu | AluSp |
CAediting_1244725 | chr17_80320579_+ | SINE | Alu | AluSp |
CAediting_1244726 | chr17_80320590_+ | SINE | Alu | AluSp |
CAediting_1244727 | chr17_80320599_+ | SINE | Alu | AluSp |
CAediting_1244728 | chr17_80320651_+ | SINE | Alu | AluSp |
CAediting_1244729 | chr17_80320659_+ | SINE | Alu | AluSp |
CAediting_1244730 | chr17_80320661_+ | SINE | Alu | AluSp |
CAediting_1244731 | chr17_80320664_+ | SINE | Alu | AluSp |
CAediting_1244732 | chr17_80320666_+ | SINE | Alu | AluSp |
CAediting_1244733 | chr17_80320673_+ | SINE | Alu | AluSp |
CAediting_1244734 | chr17_80320677_+ | SINE | Alu | AluSp |
CAediting_1244735 | chr17_80320725_+ | SINE | Alu | AluJr |
CAediting_1244736 | chr17_80320735_+ | SINE | Alu | AluJr |
CAediting_1244737 | chr17_80320743_+ | SINE | Alu | AluJr |
CAediting_1244738 | chr17_80320744_+ | SINE | Alu | AluJr |
CAediting_1244739 | chr17_80320747_+ | SINE | Alu | AluJr |
CAediting_1244740 | chr17_80320765_+ | SINE | Alu | AluJr |
CAediting_1244741 | chr17_80320779_+ | SINE | Alu | AluJr |
CAediting_1244742 | chr17_80320789_+ | SINE | Alu | AluJr |
CAediting_1244743 | chr17_80320791_+ | SINE | Alu | AluJr |
CAediting_1244744 | chr17_80320793_+ | SINE | Alu | AluJr |
CAediting_1244745 | chr17_80320797_+ | SINE | Alu | AluJr |
CAediting_1244746 | chr17_80320821_+ | SINE | Alu | AluJr |
CAediting_1244747 | chr17_80320826_+ | SINE | Alu | AluJr |
CAediting_1244748 | chr17_80320828_+ | SINE | Alu | AluJr |
CAediting_1244749 | chr17_80320831_+ | SINE | Alu | AluJr |
CAediting_1244750 | chr17_80320832_+ | SINE | Alu | AluJr |
CAediting_1244751 | chr17_80320840_+ | SINE | Alu | AluJr |
CAediting_1244752 | chr17_80320844_+ | SINE | Alu | AluJr |
CAediting_1244753 | chr17_80320848_+ | SINE | Alu | AluJr |
CAediting_1244754 | chr17_80320872_+ | SINE | Alu | AluJr |
CAediting_1244755 | chr17_80320876_+ | SINE | Alu | AluJr |
CAediting_1244756 | chr17_80320883_+ | SINE | Alu | AluJr |
CAediting_1244757 | chr17_80320889_+ | SINE | Alu | AluJr |
CAediting_1244758 | chr17_80320896_+ | SINE | Alu | AluJr |
CAediting_1244759 | chr17_80320915_+ | SINE | Alu | AluJr |
CAediting_1244760 | chr17_80320920_+ | SINE | Alu | AluJr |
CAediting_1244761 | chr17_80320921_+ | SINE | Alu | AluJr |
CAediting_1244762 | chr17_80320925_+ | SINE | Alu | AluJr |
CAediting_1244763 | chr17_80320928_+ | SINE | Alu | AluJr |
CAediting_1244764 | chr17_80320932_+ | SINE | Alu | AluJr |
CAediting_1244765 | chr17_80320936_+ | SINE | Alu | AluJr |
CAediting_1244766 | chr17_80320939_+ | SINE | Alu | AluJr |
CAediting_1244767 | chr17_80320942_+ | SINE | Alu | AluJr |
CAediting_1244768 | chr17_80320944_+ | SINE | Alu | AluJr |
CAediting_1244769 | chr17_80320947_+ | SINE | Alu | AluJr |
CAediting_1244770 | chr17_80320952_+ | SINE | Alu | AluJr |
CAediting_1244771 | chr17_80320957_+ | SINE | Alu | AluJr |
CAediting_1244772 | chr17_80320958_+ | SINE | Alu | AluJr |
CAediting_1244773 | chr17_80320967_+ | SINE | Alu | AluJr |
CAediting_1244774 | chr17_80320969_+ | SINE | Alu | AluJr |
CAediting_1244775 | chr17_80320971_+ | SINE | Alu | AluJr |
CAediting_1244776 | chr17_80320974_+ | SINE | Alu | AluJr |
CAediting_1244777 | chr17_80320975_+ | SINE | Alu | AluJr |
CAediting_1244778 | chr17_80320987_+ | SINE | Alu | AluJr |
CAediting_1244779 | chr17_80320988_+ | SINE | Alu | AluJr |
CAediting_1244780 | chr17_80320989_+ | SINE | Alu | AluJr |
CAediting_1244781 | chr17_80320990_+ | SINE | Alu | AluJr |
CAediting_1244782 | chr17_80320991_+ | SINE | Alu | AluJr |
CAediting_1244783 | chr17_80321001_+ | SINE | Alu | AluJr |
CAediting_1244784 | chr17_80321763_+ | SINE | Alu | AluSc8 |
CAediting_1244785 | chr17_80321767_+ | SINE | Alu | AluSc8 |
CAediting_1244786 | chr17_80321779_+ | SINE | Alu | AluSc8 |
CAediting_1244787 | chr17_80321825_+ | SINE | Alu | AluSc8 |
CAediting_1244788 | chr17_80321900_+ | SINE | Alu | AluSc8 |
CAediting_1244789 | chr17_80322200_+ | SINE | Alu | AluJb |
CAediting_1244790 | chr17_80322214_+ | SINE | Alu | AluJb |
CAediting_1244791 | chr17_80322222_+ | SINE | Alu | AluJb |
CAediting_1244792 | chr17_80322238_+ | SINE | Alu | AluJb |
CAediting_1244793 | chr17_80322293_+ | SINE | Alu | AluJb |
CAediting_1244794 | chr17_80322300_+ | SINE | Alu | AluJb |
CAediting_1244795 | chr17_80322302_+ | SINE | Alu | AluJb |
CAediting_1244796 | chr17_80322399_+ | SINE | Alu | AluSc8 |
CAediting_1244797 | chr17_80322455_+ | SINE | Alu | AluSc8 |
CAediting_1244798 | chr17_80322483_+ | SINE | Alu | AluSc8 |
CAediting_1244799 | chr17_80322517_+ | SINE | Alu | AluSc8 |
CAediting_1244800 | chr17_80322526_+ | SINE | Alu | AluSc8 |
CAediting_1244801 | chr17_80322541_+ | SINE | Alu | AluSc8 |
CAediting_1244802 | chr17_80322598_+ | SINE | Alu | FLAM_C |
CAediting_1244803 | chr17_80323575_+ | SINE | Alu | FAM |
CAediting_1244804 | chr17_80323589_+ | SINE | Alu | FAM |
CAediting_1244805 | chr17_80323604_+ | SINE | Alu | FAM |
CAediting_1244806 | chr17_80329567_+ | SINE | Alu | AluJb |
CAediting_1244807 | chr17_80329595_+ | SINE | Alu | AluJb |
CAediting_1244808 | chr17_80329596_+ | SINE | Alu | AluJb |
CAediting_1244809 | chr17_80329647_+ | SINE | Alu | AluJb |
CAediting_1244810 | chr17_80329651_+ | SINE | Alu | AluJb |
CAediting_1244811 | chr17_80329710_+ | SINE | Alu | AluJb |
CAediting_1244812 | chr17_80329751_+ | SINE | Alu | AluJb |
CAediting_1244813 | chr17_80330952_+ | SINE | Alu | AluSx1 |
CAediting_1244814 | chr17_80330957_+ | SINE | Alu | AluSx1 |
CAediting_1244815 | chr17_80330983_+ | SINE | Alu | AluSx1 |
CAediting_1244816 | chr17_80331071_+ | SINE | Alu | AluSx1 |
CAediting_1244817 | chr17_80331458_+ | SINE | Alu | AluSx |
CAediting_1244818 | chr17_80331572_+ | SINE | Alu | AluSx |
CAediting_1244819 | chr17_80333586_+ | SINE | Alu | AluSx1 |
CAediting_1244820 | chr17_80333588_+ | SINE | Alu | AluSx1 |
CAediting_1244821 | chr17_80334646_+ | SINE | Alu | AluY |
CAediting_1244822 | chr17_80334650_+ | SINE | Alu | AluY |
CAediting_1244823 | chr17_80334707_+ | SINE | Alu | AluY |
CAediting_1244824 | chr17_80334768_+ | SINE | Alu | AluY |
CAediting_1244825 | chr17_80334792_+ | SINE | Alu | AluY |
CAediting_1244826 | chr17_80334811_+ | SINE | Alu | AluY |
CAediting_1244827 | chr17_80334833_+ | SINE | Alu | AluY |
CAediting_1244828 | chr17_80334837_+ | SINE | Alu | AluY |
CAediting_1244829 | chr17_80334888_+ | SINE | Alu | AluY |
CAediting_1244830 | chr17_80336757_+ | SINE | Alu | AluSz6 |
CAediting_1244831 | chr17_80336761_+ | SINE | Alu | AluSz6 |
CAediting_1244832 | chr17_80336783_+ | SINE | Alu | AluSz6 |
CAediting_1244833 | chr17_80336784_+ | SINE | Alu | AluSz6 |
CAediting_1244834 | chr17_80336808_+ | SINE | Alu | AluSz6 |
CAediting_1244835 | chr17_80336910_+ | SINE | Alu | AluSz6 |
CAediting_1244836 | chr17_80336911_+ | SINE | Alu | AluSz6 |
CAediting_1244837 | chr17_80336912_+ | SINE | Alu | AluSz6 |
CAediting_1244838 | chr17_80336913_+ | SINE | Alu | AluSz6 |
CAediting_1244839 | chr17_80336915_+ | SINE | Alu | AluSz6 |
CAediting_1244840 | chr17_80336916_+ | SINE | Alu | AluSz6 |
CAediting_1244841 | chr17_80336918_+ | SINE | Alu | AluSz6 |
CAediting_1244842 | chr17_80340836_+ | SINE | Alu | AluSc8 |
CAediting_1244843 | chr17_80340858_+ | SINE | Alu | AluSc8 |
CAediting_1244844 | chr17_80340931_+ | SINE | Alu | AluSc8 |
CAediting_1244845 | chr17_80340938_+ | SINE | Alu | AluSc8 |
CAediting_1244846 | chr17_80341591_+ | SINE | Alu | AluJb |
CAediting_1244847 | chr17_80341599_+ | SINE | Alu | AluJb |
CAediting_1244848 | chr17_80341630_+ | SINE | Alu | AluJb |
CAediting_1244849 | chr17_80341658_+ | SINE | Alu | AluJb |
CAediting_1244850 | chr17_80341663_+ | SINE | Alu | AluJb |
CAediting_1244851 | chr17_80341664_+ | SINE | Alu | AluJb |
CAediting_1244852 | chr17_80341690_+ | SINE | Alu | AluJb |
CAediting_1244853 | chr17_80341693_+ | SINE | Alu | AluJb |
CAediting_1244854 | chr17_80341713_+ | SINE | Alu | AluJb |
CAediting_1244855 | chr17_80341725_+ | SINE | Alu | AluJb |
CAediting_1244856 | chr17_80341726_+ | SINE | Alu | AluJb |
CAediting_1244857 | chr17_80341838_+ | SINE | Alu | AluSz |
CAediting_1244858 | chr17_80341936_+ | SINE | Alu | AluSz |
Top |
RNA A-to-I editing events in the alternative splicing sites for RNF213 |
RNA A-to-I editing(s) in the alternative splicing sites. |
AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000173821.18.RNF213. |
Correlation between RNA A-to-I editing and PSI for ENSG00000173821.18.RNF213. |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for RNF213 |
Differential gene expressions between RNA A-to-I edited and non-edited tumor samples. * The grey color means N/A. |
Correlation between RNA A-to-I editing and gene expression. |
- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
BRCA.CAediting_1244718.ENSG00000173821.RNF213.png |
BRCA.CAediting_1244731.ENSG00000173821.RNF213.png |
BRCA.CAediting_1244735.ENSG00000173821.RNF213.png |
BRCA.CAediting_1244737.ENSG00000173821.RNF213.png |
BRCA.CAediting_1244738.ENSG00000173821.RNF213.png |
BRCA.CAediting_1244767.ENSG00000173821.RNF213.png |
CESC.CAediting_1244718.ENSG00000173821.RNF213.png |
CESC.CAediting_1244738.ENSG00000173821.RNF213.png |
GBM.CAediting_1244718.ENSG00000173821.RNF213.png |
GBM.CAediting_1244763.ENSG00000173821.RNF213.png |
GBM.CAediting_1244772.ENSG00000173821.RNF213.png |
HNSC.CAediting_1244737.ENSG00000173821.RNF213.png |
LIHC.CAediting_1244763.ENSG00000173821.RNF213.png |
LUSC.CAediting_1244718.ENSG00000173821.RNF213.png |
LUSC.CAediting_1244737.ENSG00000173821.RNF213.png |
LUSC.CAediting_1244763.ENSG00000173821.RNF213.png |
LUSC.CAediting_1244767.ENSG00000173821.RNF213.png |
OV.CAediting_1244718.ENSG00000173821.RNF213.png |
OV.CAediting_1244763.ENSG00000173821.RNF213.png |
SARC.CAediting_1244713.ENSG00000173821.RNF213.png |
SARC.CAediting_1244737.ENSG00000173821.RNF213.png |
SARC.CAediting_1244738.ENSG00000173821.RNF213.png |
SARC.CAediting_1244772.ENSG00000173821.RNF213.png |
SKCM.CAediting_1244718.ENSG00000173821.RNF213.png |
SKCM.CAediting_1244731.ENSG00000173821.RNF213.png |
SKCM.CAediting_1244737.ENSG00000173821.RNF213.png |
SKCM.CAediting_1244738.ENSG00000173821.RNF213.png |
SKCM.CAediting_1244763.ENSG00000173821.RNF213.png |
SKCM.CAediting_1244767.ENSG00000173821.RNF213.png |
UCS.CAediting_1244767.ENSG00000173821.RNF213.png |
Top |
Protein coding region RNA A-to-I editings for RNF213 |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for RNF213 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1244714 | chr17_80320408_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-181c-3p | 80320406 | 80320412 | 7mer-m8 | 80320391 | 80320413 | 147.00 | -18.11 |
CAediting_1244718 | chr17_80320453_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3622a-3p | 80320449 | 80320456 | 8mer-1a | 80320435 | 80320456 | 148.00 | -19.42 |
CAediting_1244718 | chr17_80320453_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3622b-3p | 80320449 | 80320456 | 8mer-1a | 80320436 | 80320456 | 155.00 | -23.04 |
CAediting_1244720 | chr17_80320479_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6765-3p | 80320475 | 80320481 | 7mer-m8 | 80320462 | 80320482 | 149.00 | -21.31 |
CAediting_1244720 | chr17_80320479_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6804-3p | 80320476 | 80320482 | 7mer-m8 | 80320462 | 80320483 | 140.00 | -12.18 |
CAediting_1244720 | chr17_80320479_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6852-5p | 80320474 | 80320479 | 6mer | 80320461 | 80320480 | 149.00 | -26.62 |
CAediting_1244725 | chr17_80320579_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-340-3p | 80320573 | 80320579 | 7mer-m8 | 80320559 | 80320580 | 145.00 | -17.73 |
CAediting_1244725 | chr17_80320579_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6827-3p | 80320573 | 80320579 | 7mer-m8 | 80320560 | 80320580 | 161.00 | -21.91 |
CAediting_1244730 | chr17_80320661_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3150a-5p | 80320656 | 80320663 | 8mer-1a | 80320643 | 80320663 | 146.00 | -12.85 |
CAediting_1244730 | chr17_80320661_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3150b-5p | 80320656 | 80320663 | 8mer-1a | 80320643 | 80320663 | 146.00 | -13.05 |
CAediting_1244731 | chr17_80320664_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-106a-3p | 80320660 | 80320665 | 6mer | 80320645 | 80320666 | 142.00 | -22.32 |
CAediting_1244732 | chr17_80320666_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-100-5p | 80320662 | 80320668 | 7mer-m8 | 80320647 | 80320669 | 158.00 | -19.85 |
CAediting_1244732 | chr17_80320666_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-99a-5p | 80320662 | 80320668 | 7mer-m8 | 80320647 | 80320669 | 151.00 | -18.41 |
CAediting_1244732 | chr17_80320666_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-99b-5p | 80320662 | 80320668 | 7mer-m8 | 80320647 | 80320669 | 150.00 | -23.94 |
CAediting_1244736 | chr17_80320735_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4634 | 80320732 | 80320738 | 7mer-m8 | 80320721 | 80320739 | 154.00 | -22.02 |
CAediting_1244737 | chr17_80320743_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-513a-5p | 80320737 | 80320743 | 7mer-m8 | 80320727 | 80320744 | 140.00 | -13.80 |
CAediting_1244737 | chr17_80320743_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-513a-5p | 80320737 | 80320743 | 7mer-m8 | 80320727 | 80320744 | 140.00 | -13.80 |
CAediting_1244741 | chr17_80320779_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-214-5p | 80320774 | 80320780 | 7mer-m8 | 80320760 | 80320781 | 159.00 | -20.98 |
CAediting_1244741 | chr17_80320779_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4421 | 80320773 | 80320779 | 7mer-m8 | 80320760 | 80320780 | 147.00 | -16.86 |
CAediting_1244741 | chr17_80320779_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4650-5p | 80320777 | 80320783 | 7mer-m8 | 80320766 | 80320784 | 149.00 | -16.01 |
CAediting_1244741 | chr17_80320779_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4650-5p | 80320777 | 80320783 | 7mer-m8 | 80320766 | 80320784 | 149.00 | -16.01 |
CAediting_1244741 | chr17_80320779_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-5699-3p | 80320773 | 80320779 | 7mer-m8 | 80320759 | 80320780 | 155.00 | -21.92 |
CAediting_1244741 | chr17_80320779_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6735-3p | 80320775 | 80320781 | 7mer-m8 | 80320757 | 80320782 | 146.00 | -27.03 |
CAediting_1244744 | chr17_80320793_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-10a-5p | 80320788 | 80320795 | 8mer-1a | 80320774 | 80320795 | 155.00 | -26.34 |
CAediting_1244744 | chr17_80320793_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-10b-5p | 80320788 | 80320795 | 8mer-1a | 80320774 | 80320795 | 151.00 | -23.25 |
CAediting_1244756 | chr17_80320883_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3943 | 80320880 | 80320886 | 7mer-m8 | 80320867 | 80320887 | 146.00 | -22.28 |
CAediting_1244757 | chr17_80320889_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6849-3p | 80320882 | 80320888 | 7mer-m8 | 80320868 | 80320889 | 140.00 | -18.03 |
CAediting_1244758 | chr17_80320896_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-1225-3p | 80320894 | 80320900 | 7mer-m8 | 80320881 | 80320901 | 150.00 | -26.15 |
CAediting_1244758 | chr17_80320896_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3943 | 80320893 | 80320899 | 7mer-m8 | 80320878 | 80320900 | 152.00 | -24.81 |
CAediting_1244758 | chr17_80320896_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6769a-3p | 80320894 | 80320899 | 6mer | 80320878 | 80320900 | 142.00 | -30.82 |
CAediting_1244761 | chr17_80320921_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-18a-3p | 80320919 | 80320925 | 7mer-m8 | 80320909 | 80320926 | 147.00 | -26.19 |
CAediting_1244761 | chr17_80320921_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4732-3p | 80320916 | 80320922 | 7mer-m8 | 80320904 | 80320923 | 153.00 | -25.72 |
CAediting_1244761 | chr17_80320921_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-7976 | 80320917 | 80320924 | 8mer-1a | 80320907 | 80320924 | 154.00 | -22.70 |
CAediting_1244761 | chr17_80320921_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-874-3p | 80320918 | 80320924 | 7mer-m8 | 80320904 | 80320925 | 156.00 | -33.31 |
CAediting_1244764 | chr17_80320932_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-324-3p | 80320925 | 80320931 | 7mer-m8 | 80320909 | 80320932 | 148.00 | -27.09 |
CAediting_1244766 | chr17_80320939_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-591 | 80320934 | 80320941 | 8mer-1a | 80320925 | 80320941 | 154.00 | -23.89 |
CAediting_1244766 | chr17_80320939_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6808-3p | 80320937 | 80320943 | 7mer-m8 | 80320923 | 80320944 | 166.00 | -28.45 |
CAediting_1244766 | chr17_80320939_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-7153-3p | 80320933 | 80320939 | 7mer-m8 | 80320920 | 80320940 | 141.00 | -14.31 |
CAediting_1244767 | chr17_80320942_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-675-5p | 80320940 | 80320946 | 7mer-1a | 80320924 | 80320946 | 149.00 | -25.01 |
CAediting_1244772 | chr17_80320958_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3929 | 80320954 | 80320960 | 7mer-m8 | 80320938 | 80320961 | 160.00 | -18.22 |
CAediting_1244772 | chr17_80320958_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4478 | 80320954 | 80320960 | 7mer-m8 | 80320945 | 80320961 | 151.00 | -16.14 |
CAediting_1244710 | chr17_80320371_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4433b-5p | 80320368 | 80320374 | 7mer-m8 | 80320355 | 80320375 | 140.00 | -10.81 |
CAediting_1244711 | chr17_80320373_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-5001-3p | 80320370 | 80320376 | 7mer-m8 | 80320356 | 80320377 | 145.00 | -17.39 |
CAediting_1244712 | chr17_80320377_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-10a-5p | 80320372 | 80320378 | 7mer-m8 | 80320359 | 80320379 | 142.00 | -13.09 |
CAediting_1244712 | chr17_80320377_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-10b-5p | 80320372 | 80320378 | 7mer-m8 | 80320354 | 80320379 | 147.00 | -15.61 |
CAediting_1244712 | chr17_80320377_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-339-5p | 80320371 | 80320377 | 7mer-m8 | 80320357 | 80320378 | 151.00 | -21.45 |
CAediting_1244712 | chr17_80320377_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4421 | 80320370 | 80320376 | 7mer-m8 | 80320357 | 80320377 | 152.00 | -15.88 |
CAediting_1244712 | chr17_80320377_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-5699-3p | 80320370 | 80320376 | 7mer-m8 | 80320356 | 80320377 | 141.00 | -16.39 |
CAediting_1244712 | chr17_80320377_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6732-3p | 80320373 | 80320379 | 7mer-m8 | 80320359 | 80320380 | 151.00 | -17.67 |
CAediting_1244716 | chr17_80320427_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3960 | 80320425 | 80320431 | 7mer-1a | 80320421 | 80320440 | 146.00 | -32.34 |
CAediting_1244716 | chr17_80320427_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4285 | 80320423 | 80320429 | 7mer-m8 | 80320413 | 80320430 | 152.00 | -22.26 |
CAediting_1244723 | chr17_80320573_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4279 | 80320570 | 80320576 | 7mer-m8 | 80320562 | 80320577 | 140.00 | -11.01 |
CAediting_1244723 | chr17_80320573_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-520f-5p | 80320566 | 80320572 | 7mer-m8 | 80320552 | 80320573 | 144.00 | -14.48 |
CAediting_1244724 | chr17_80320575_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-5088-3p | 80320569 | 80320576 | 8mer-1a | 80320556 | 80320576 | 140.00 | -13.92 |
CAediting_1244728 | chr17_80320651_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4497 | 80320645 | 80320651 | 7mer-m8 | 80320637 | 80320652 | 149.00 | -28.47 |
CAediting_1244733 | chr17_80320673_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-663b | 80320671 | 80320677 | 7mer-m8 | 80320657 | 80320678 | 147.00 | -26.98 |
CAediting_1244734 | chr17_80320677_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3960 | 80320674 | 80320680 | 7mer-m8 | 80320662 | 80320681 | 147.00 | -22.62 |
CAediting_1244734 | chr17_80320677_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-8072 | 80320674 | 80320680 | 7mer-m8 | 80320662 | 80320681 | 140.00 | -17.29 |
CAediting_1244742 | chr17_80320789_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6728-3p | 80320787 | 80320793 | 7mer-m8 | 80320774 | 80320794 | 140.00 | -20.39 |
CAediting_1244748 | chr17_80320828_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6885-3p | 80320825 | 80320832 | 8mer-1a | 80320812 | 80320832 | 140.00 | -4.86 |
CAediting_1244749 | chr17_80320831_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4652-3p | 80320826 | 80320833 | 8mer-1a | 80320812 | 80320833 | 142.00 | -7.53 |
CAediting_1244750 | chr17_80320832_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-578 | 80320827 | 80320834 | 8mer-1a | 80320814 | 80320834 | 140.00 | -6.93 |
CAediting_1244751 | chr17_80320840_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3190-5p | 80320838 | 80320844 | 7mer-m8 | 80320826 | 80320845 | 143.00 | -16.24 |
CAediting_1244751 | chr17_80320840_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-548s | 80320837 | 80320843 | 7mer-m8 | 80320822 | 80320844 | 140.00 | -10.54 |
CAediting_1244759 | chr17_80320915_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-2276-5p | 80320910 | 80320916 | 7mer-m8 | 80320896 | 80320917 | 141.00 | -18.82 |
CAediting_1244759 | chr17_80320915_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-326 | 80320908 | 80320914 | 7mer-m8 | 80320896 | 80320915 | 155.00 | -27.55 |
CAediting_1244759 | chr17_80320915_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-330-5p | 80320908 | 80320914 | 7mer-m8 | 80320894 | 80320915 | 154.00 | -25.08 |
CAediting_1244773 | chr17_80320967_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-1913 | 80320963 | 80320970 | 8mer-1a | 80320949 | 80320970 | 152.00 | -22.82 |
CAediting_1244773 | chr17_80320967_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-5001-3p | 80320965 | 80320970 | 6mer | 80320953 | 80320971 | 142.00 | -25.27 |
CAediting_1244775 | chr17_80320971_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-339-5p | 80320965 | 80320971 | 7mer-m8 | 80320950 | 80320972 | 171.00 | -33.54 |
CAediting_1244775 | chr17_80320971_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-5699-3p | 80320965 | 80320970 | 6mer | 80320951 | 80320971 | 146.00 | -29.08 |
CAediting_1244775 | chr17_80320971_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6748-3p | 80320964 | 80320970 | 7mer-m8 | 80320951 | 80320971 | 146.00 | -22.59 |
CAediting_1244775 | chr17_80320971_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-874-3p | 80320967 | 80320974 | 8mer-1a | 80320953 | 80320974 | 157.00 | -26.86 |
CAediting_1244779 | chr17_80320988_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3160-5p | 80320986 | 80320993 | 8mer-1a | 80320972 | 80320993 | 145.00 | -15.03 |
CAediting_1244779 | chr17_80320988_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3160-5p | 80320986 | 80320993 | 8mer-1a | 80320972 | 80320993 | 145.00 | -15.03 |
CAediting_1244779 | chr17_80320988_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4329 | 80320981 | 80320988 | 8mer-1a | 80320970 | 80320988 | 140.00 | -10.31 |
CAediting_1244780 | chr17_80320989_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-103a-1-5p | 80320986 | 80320993 | 8mer-1a | 80320968 | 80320993 | 151.00 | -17.08 |
CAediting_1244780 | chr17_80320989_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-103a-2-5p | 80320986 | 80320993 | 8mer-1a | 80320968 | 80320993 | 151.00 | -15.77 |
CAediting_1244780 | chr17_80320989_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-526b-5p | 80320983 | 80320990 | 8mer-1a | 80320968 | 80320990 | 161.00 | -14.21 |
CAediting_1244747 | chr17_80320826_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-153-5p | 80320819 | 80320826 | 8mer-1a | 80320805 | 80320826 | 156.00 | -9.01 |
CAediting_1244747 | chr17_80320826_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6853-3p | 80320822 | 80320829 | 8mer-1a | 80320808 | 80320829 | 140.00 | -8.57 |
CAediting_1244755 | chr17_80320876_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-1207-3p | 80320869 | 80320875 | 7mer-m8 | 80320858 | 80320876 | 145.00 | -15.47 |
CAediting_1244755 | chr17_80320876_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-503-5p | 80320872 | 80320877 | 6mer | 80320853 | 80320878 | 140.00 | -25.09 |
CAediting_1244755 | chr17_80320876_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-646 | 80320871 | 80320877 | 7mer-m8 | 80320860 | 80320878 | 145.00 | -18.39 |
CAediting_1244770 | chr17_80320952_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-7706 | 80320949 | 80320956 | 8mer-1a | 80320934 | 80320956 | 152.00 | -17.81 |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1244760 | chr17_80320920_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-10397-5p | 80320916 | 80320922 | 7mer-m8 | 80320902 | 80320923 | 154 | -22.05 |
CAediting_1244761 | chr17_80320921_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-10397-5p | 80320916 | 80320922 | 7mer-m8 | 80320902 | 80320923 | 154 | -22.05 |
CAediting_1244737 | chr17_80320743_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-10399-5p | 80320738 | 80320744 | 7mer-m8 | 80320725 | 80320745 | 140 | -10.39 |
CAediting_1244738 | chr17_80320744_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-10399-5p | 80320738 | 80320744 | 7mer-m8 | 80320725 | 80320745 | 140 | -10.39 |
CAediting_1244725 | chr17_80320579_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-10a-5p | 80320576 | 80320582 | 7mer-m8 | 80320561 | 80320583 | 145 | -13.67 |
CAediting_1244725 | chr17_80320579_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-10b-5p | 80320576 | 80320582 | 7mer-m8 | 80320561 | 80320583 | 140 | -12.21 |
CAediting_1244720 | chr17_80320479_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-12126 | 80320474 | 80320480 | 7mer-m8 | 80320458 | 80320481 | 147 | -12.43 |
CAediting_1244759 | chr17_80320915_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-1237-3p | 80320910 | 80320916 | 7mer-m8 | 80320897 | 80320917 | 144 | -16.43 |
CAediting_1244740 | chr17_80320765_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-1343-3p | 80320761 | 80320767 | 7mer-m8 | 80320746 | 80320768 | 151 | -30.41 |
CAediting_1244764 | chr17_80320932_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-135a-5p | 80320931 | 80320936 | 6mer | 80320915 | 80320937 | 140 | -15.58 |
CAediting_1244765 | chr17_80320936_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-135a-5p | 80320931 | 80320936 | 6mer | 80320915 | 80320937 | 140 | -15.58 |
CAediting_1244764 | chr17_80320932_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-135a-5p | 80320931 | 80320936 | 6mer | 80320915 | 80320937 | 140 | -15.58 |
CAediting_1244765 | chr17_80320936_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-135a-5p | 80320931 | 80320936 | 6mer | 80320915 | 80320937 | 140 | -15.58 |
CAediting_1244770 | chr17_80320952_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-143-5p | 80320946 | 80320952 | 7mer-m8 | 80320931 | 80320953 | 155 | -21.6 |
CAediting_1244756 | chr17_80320883_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-150-5p | 80320877 | 80320883 | 7mer-m8 | 80320861 | 80320884 | 150 | -18.8 |
CAediting_1244726 | chr17_80320590_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-1843 | 80320585 | 80320590 | 6mer | 80320571 | 80320591 | 148 | -25.98 |
CAediting_1244745 | chr17_80320797_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-193a-5p | 80320795 | 80320801 | 7mer-m8 | 80320781 | 80320802 | 140 | -13.01 |
CAediting_1244777 | chr17_80320975_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-193a-5p | 80320973 | 80320979 | 7mer-m8 | 80320960 | 80320980 | 141 | -14.19 |
CAediting_1244745 | chr17_80320797_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-200c-5p | 80320793 | 80320799 | 7mer-m8 | 80320779 | 80320800 | 144 | -12.85 |
CAediting_1244758 | chr17_80320896_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-2114-3p | 80320894 | 80320900 | 7mer-m8 | 80320881 | 80320901 | 140 | -17.32 |
CAediting_1244765 | chr17_80320936_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-2681-3p | 80320933 | 80320939 | 7mer-m8 | 80320919 | 80320940 | 140 | -12.59 |
CAediting_1244766 | chr17_80320939_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-2681-3p | 80320933 | 80320939 | 7mer-m8 | 80320919 | 80320940 | 140 | -12.59 |
CAediting_1244714 | chr17_80320408_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-32-5p | 80320403 | 80320409 | 7mer-m8 | 80320389 | 80320410 | 144 | -12.53 |
CAediting_1244725 | chr17_80320579_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-339-5p | 80320575 | 80320581 | 7mer-m8 | 80320558 | 80320582 | 151 | -18.58 |
CAediting_1244733 | chr17_80320673_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-342-3p | 80320667 | 80320673 | 7mer-m8 | 80320648 | 80320674 | 153 | -18.41 |
CAediting_1244720 | chr17_80320479_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3614-5p | 80320475 | 80320481 | 7mer-m8 | 80320459 | 80320482 | 152 | -20.47 |
CAediting_1244714 | chr17_80320408_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-363-3p | 80320403 | 80320409 | 7mer-m8 | 80320389 | 80320410 | 147 | -16.12 |
CAediting_1244743 | chr17_80320791_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3664-5p | 80320788 | 80320795 | 8mer-1a | 80320773 | 80320795 | 146 | -13.93 |
CAediting_1244744 | chr17_80320793_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3664-5p | 80320788 | 80320795 | 8mer-1a | 80320773 | 80320795 | 146 | -13.93 |
CAediting_1244712 | chr17_80320377_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-3664-5p | 80320372 | 80320378 | 7mer-m8 | 80320359 | 80320379 | 154 | -16.53 |
CAediting_1244710 | chr17_80320371_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-371b-5p | 80320365 | 80320372 | 8mer-1a | 80320351 | 80320372 | 147 | -13.62 |
CAediting_1244710 | chr17_80320371_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-373-5p | 80320365 | 80320372 | 8mer-1a | 80320351 | 80320372 | 140 | -10.77 |
CAediting_1244733 | chr17_80320673_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4284 | 80320669 | 80320676 | 8mer-1a | 80320659 | 80320676 | 151 | -19.56 |
CAediting_1244764 | chr17_80320932_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4284 | 80320928 | 80320935 | 8mer-1a | 80320918 | 80320935 | 143 | -14.67 |
CAediting_1244727 | chr17_80320599_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4293 | 80320596 | 80320602 | 7mer-m8 | 80320587 | 80320603 | 146 | -21.19 |
CAediting_1244776 | chr17_80320974_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-431-5p | 80320971 | 80320977 | 7mer-m8 | 80320956 | 80320978 | 146 | -16.49 |
CAediting_1244777 | chr17_80320975_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-431-5p | 80320971 | 80320977 | 7mer-m8 | 80320956 | 80320978 | 146 | -16.49 |
CAediting_1244725 | chr17_80320579_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4421 | 80320574 | 80320580 | 7mer-m8 | 80320560 | 80320581 | 150 | -15.34 |
CAediting_1244719 | chr17_80320470_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4478 | 80320467 | 80320473 | 7mer-m8 | 80320459 | 80320474 | 149 | -25.05 |
CAediting_1244726 | chr17_80320590_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4531 | 80320583 | 80320589 | 7mer-m8 | 80320574 | 80320590 | 151 | -18.2 |
CAediting_1244719 | chr17_80320470_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4649-3p | 80320464 | 80320470 | 7mer-m8 | 80320451 | 80320471 | 140 | -14.11 |
CAediting_1244740 | chr17_80320765_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4674 | 80320758 | 80320764 | 7mer-m8 | 80320745 | 80320765 | 151 | -21.51 |
CAediting_1244754 | chr17_80320872_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4731-5p | 80320868 | 80320873 | 6mer | 80320854 | 80320874 | 154 | -30.61 |
CAediting_1244751 | chr17_80320840_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4735-5p | 80320834 | 80320840 | 7mer-m8 | 80320820 | 80320841 | 140 | -4.28 |
CAediting_1244751 | chr17_80320840_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4794 | 80320838 | 80320844 | 7mer-m8 | 80320824 | 80320845 | 140 | -12.56 |
CAediting_1244752 | chr17_80320844_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-4794 | 80320838 | 80320844 | 7mer-m8 | 80320824 | 80320845 | 140 | -12.56 |
CAediting_1244710 | chr17_80320371_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-514b-5p | 80320367 | 80320372 | 6mer | 80320350 | 80320373 | 143 | -18.63 |
CAediting_1244711 | chr17_80320373_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-514b-5p | 80320367 | 80320372 | 6mer | 80320350 | 80320373 | 143 | -18.63 |
CAediting_1244770 | chr17_80320952_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-519a-3p | 80320948 | 80320954 | 7mer-m8 | 80320934 | 80320955 | 140 | -8.98 |
CAediting_1244770 | chr17_80320952_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-519a-3p | 80320948 | 80320954 | 7mer-m8 | 80320934 | 80320955 | 140 | -8.98 |
CAediting_1244770 | chr17_80320952_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-519b-3p | 80320948 | 80320954 | 7mer-m8 | 80320934 | 80320955 | 140 | -9.35 |
CAediting_1244770 | chr17_80320952_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-519c-3p | 80320948 | 80320954 | 7mer-m8 | 80320934 | 80320955 | 140 | -9.82 |
CAediting_1244744 | chr17_80320793_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-550b-3p | 80320791 | 80320798 | 8mer-1a | 80320775 | 80320798 | 147 | -22.85 |
CAediting_1244745 | chr17_80320797_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-550b-3p | 80320791 | 80320798 | 8mer-1a | 80320775 | 80320798 | 147 | -22.85 |
CAediting_1244744 | chr17_80320793_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-550b-3p | 80320791 | 80320798 | 8mer-1a | 80320775 | 80320798 | 147 | -22.85 |
CAediting_1244745 | chr17_80320797_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-550b-3p | 80320791 | 80320798 | 8mer-1a | 80320775 | 80320798 | 147 | -22.85 |
CAediting_1244774 | chr17_80320969_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-5691 | 80320967 | 80320974 | 8mer-1a | 80320953 | 80320974 | 153 | -22.7 |
CAediting_1244775 | chr17_80320971_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-5691 | 80320967 | 80320974 | 8mer-1a | 80320953 | 80320974 | 153 | -22.7 |
CAediting_1244776 | chr17_80320974_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-5691 | 80320967 | 80320974 | 8mer-1a | 80320953 | 80320974 | 153 | -22.7 |
CAediting_1244755 | chr17_80320876_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-5697 | 80320873 | 80320879 | 7mer-m8 | 80320859 | 80320880 | 146 | -19.06 |
CAediting_1244725 | chr17_80320579_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-5699-3p | 80320574 | 80320580 | 7mer-m8 | 80320560 | 80320581 | 153 | -17.14 |
CAediting_1244721 | chr17_80320548_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-574-5p | 80320544 | 80320550 | 7mer-m8 | 80320530 | 80320551 | 148 | -20.14 |
CAediting_1244710 | chr17_80320371_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-616-5p | 80320365 | 80320372 | 8mer-1a | 80320351 | 80320372 | 152 | -10.75 |
CAediting_1244754 | chr17_80320872_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-619-5p | 80320867 | 80320872 | 6mer | 80320852 | 80320873 | 154 | -33.25 |
CAediting_1244721 | chr17_80320548_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-644a | 80320542 | 80320548 | 7mer-m8 | 80320531 | 80320549 | 140 | -13.24 |
CAediting_1244737 | chr17_80320743_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6504-3p | 80320738 | 80320744 | 7mer-m8 | 80320726 | 80320745 | 140 | -10.11 |
CAediting_1244738 | chr17_80320744_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6504-3p | 80320738 | 80320744 | 7mer-m8 | 80320726 | 80320745 | 140 | -10.11 |
CAediting_1244751 | chr17_80320840_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-664a-5p | 80320838 | 80320844 | 7mer-m8 | 80320822 | 80320845 | 141 | -13.38 |
CAediting_1244752 | chr17_80320844_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-664a-5p | 80320838 | 80320844 | 7mer-m8 | 80320822 | 80320845 | 141 | -13.38 |
CAediting_1244735 | chr17_80320725_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6774-3p | 80320720 | 80320726 | 7mer-m8 | 80320707 | 80320727 | 150 | -20.49 |
CAediting_1244716 | chr17_80320427_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6807-5p | 80320420 | 80320426 | 7mer-m8 | 80320408 | 80320427 | 147 | -19.76 |
CAediting_1244724 | chr17_80320575_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6818-3p | 80320572 | 80320578 | 7mer-m8 | 80320558 | 80320579 | 147 | -14.38 |
CAediting_1244725 | chr17_80320579_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6818-3p | 80320572 | 80320578 | 7mer-m8 | 80320558 | 80320579 | 147 | -14.38 |
CAediting_1244753 | chr17_80320848_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6872-3p | 80320844 | 80320850 | 7mer-m8 | 80320831 | 80320851 | 145 | -14.26 |
CAediting_1244762 | chr17_80320925_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6882-3p | 80320920 | 80320927 | 8mer-1a | 80320903 | 80320927 | 148 | -24.58 |
CAediting_1244711 | chr17_80320373_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6888-3p | 80320370 | 80320376 | 7mer-m8 | 80320357 | 80320377 | 151 | -15.55 |
CAediting_1244712 | chr17_80320377_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6888-3p | 80320370 | 80320376 | 7mer-m8 | 80320357 | 80320377 | 151 | -15.55 |
CAediting_1244737 | chr17_80320743_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-7151-3p | 80320736 | 80320743 | 8mer-1a | 80320723 | 80320743 | 146 | -15.09 |
CAediting_1244719 | chr17_80320470_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-7160-5p | 80320465 | 80320471 | 7mer-m8 | 80320452 | 80320472 | 146 | -17.63 |
CAediting_1244766 | chr17_80320939_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-8070 | 80320938 | 80320943 | 6mer | 80320924 | 80320944 | 149 | -17.68 |
CAediting_1244767 | chr17_80320942_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-8070 | 80320938 | 80320943 | 6mer | 80320924 | 80320944 | 149 | -17.68 |
CAediting_1244768 | chr17_80320944_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-8070 | 80320938 | 80320943 | 6mer | 80320924 | 80320944 | 149 | -17.68 |
CAediting_1244720 | chr17_80320479_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-887-5p | 80320472 | 80320478 | 7mer-m8 | 80320460 | 80320479 | 143 | -19.73 |
CAediting_1244740 | chr17_80320765_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-939-3p | 80320760 | 80320767 | 8mer-1a | 80320747 | 80320767 | 145 | -19.78 |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_980496 | chr14_31014685_- | ENSG00000173821.18 | ENST00000582970 | hsa-miR-624-3p | 80396251 | 80396257 | 7mer-m8 | 80396238 | 80396258 | 148 | -13.46 |
CAediting_393 | chr1_1167164_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-200b-3p | 80398458 | 80398465 | 8mer-1a | 80398444 | 80398465 | 154 | -16.16 |
CAediting_980496 | chr14_31014685_- | ENSG00000173821.18 | ENST00000319921 | hsa-miR-624-3p | 80320798 | 80320804 | 7mer-m8 | 80320783 | 80320805 | 154 | -18.87 |
CAediting_980496 | chr14_31014685_- | ENSG00000173821.18 | ENST00000319921 | hsa-miR-624-3p | 80320976 | 80320982 | 7mer-m8 | 80320963 | 80320983 | 156 | -16.85 |
CAediting_1160181 | chr17_7017644_- | ENSG00000173821.18 | ENST00000508628 | hsa-miR-195-3p | 80393780 | 80393786 | 7mer-m8 | 80393767 | 80393787 | 154 | -13.69 |
CAediting_1054808 | chr15_66496985_- | ENSG00000173821.18 | ENST00000582970 | hsa-miR-4512 | 80397969 | 80397975 | 7mer-m8 | 80397957 | 80397976 | 147 | -21.01 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-548aa | 80398054 | 80398060 | 7mer-m8 | 80398035 | 80398061 | 153 | -14.85 |
CAediting_1160181 | chr17_7017644_- | ENSG00000173821.18 | ENST00000582970 | hsa-miR-195-3p | 80393780 | 80393786 | 7mer-m8 | 80393767 | 80393787 | 154 | -13.69 |
CAediting_1306323 | chr19_13836462_- | ENSG00000173821.18 | ENST00000582970 | hsa-miR-27a-3p | 80397520 | 80397527 | 8mer-1a | 80397508 | 80397527 | 146 | -18.48 |
CAediting_414656 | chr5_72878640_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-4804-3p | 80398333 | 80398340 | 8mer-1a | 80398317 | 80398340 | 157 | -21.19 |
CAediting_604450 | chr7_133034877_- | ENSG00000173821.18 | ENST00000582970 | hsa-miR-3654 | 80396893 | 80396900 | 8mer-1a | 80396882 | 80396900 | 140 | -16.91 |
CAediting_573001 | chr7_92204086_- | ENSG00000173821.18 | ENST00000582970 | hsa-miR-1285-5p | 80395468 | 80395474 | 7mer-m8 | 80395454 | 80395475 | 144 | -15.92 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-548aa | 80320245 | 80320251 | 7mer-m8 | 80320226 | 80320252 | 154 | -14.27 |
CAediting_1160181 | chr17_7017644_- | ENSG00000173821.18 | ENST00000319921 | hsa-miR-195-3p | 80319920 | 80319927 | 8mer-1a | 80319907 | 80319927 | 154 | -19.08 |
CAediting_86358 | chr1_109598906_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-197-5p | 80320629 | 80320636 | 8mer-1a | 80320614 | 80320636 | 140 | -24.75 |
CAediting_580943 | chr7_100356700_+ | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6840-3p | 80320441 | 80320447 | 7mer-m8 | 80320423 | 80320448 | 146 | -28.82 |
CAediting_77128 | chr1_85133844_+ | ENSG00000173821.18 | ENST00000573038 | hsa-miR-4423-3p | 80374725 | 80374731 | 7mer-m8 | 80374712 | 80374732 | 140 | -11.97 |
CAediting_468389 | chr6_31355314_- | ENSG00000173821.18 | ENST00000319921 | hsa-miR-6891-5p | 80320174 | 80320180 | 7mer-m8 | 80320163 | 80320181 | 158 | -27.43 |
CAediting_1524209 | chrX_134546392_- | ENSG00000173821.18 | ENST00000319921 | hsa-miR-503-5p | 80320434 | 80320440 | 7mer-m8 | 80320419 | 80320441 | 148 | -20.78 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_688080 | chr9_63819626_+ | ENSG00000173821.18 | ENST00000508628 | hsa-miR-4477b | 80394611 | 80394617 | 7mer-m8 | 80394597 | 80394618 | 148 | -13.83 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000173821.18 | ENST00000508628 | hsa-miR-548aa | 80394179 | 80394185 | 7mer-m8 | 80394163 | 80394186 | 142 | -8.22 |
CAediting_442554 | chr5_154685830_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-1303 | 80397280 | 80397286 | 7mer-m8 | 80397262 | 80397287 | 154 | -25.36 |
CAediting_846604 | chr11_93733708_- | ENSG00000173821.18 | ENST00000582970 | hsa-miR-1304-3p | 80394089 | 80394095 | 7mer-m8 | 80394074 | 80394096 | 146 | -13.49 |
CAediting_1160181 | chr17_7017644_- | ENSG00000173821.18 | ENST00000582970 | hsa-miR-195-3p | 80396422 | 80396428 | 7mer-m8 | 80396410 | 80396429 | 142 | -12.89 |
CAediting_393 | chr1_1167164_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-200b-3p | 80397013 | 80397019 | 7mer-m8 | 80397002 | 80397020 | 142 | -9.81 |
CAediting_1306323 | chr19_13836462_- | ENSG00000173821.18 | ENST00000582970 | hsa-miR-27a-3p | 80394861 | 80394866 | 6mer | 80394846 | 80394867 | 143 | -23.99 |
CAediting_1368054 | chr19_46709310_- | ENSG00000173821.18 | ENST00000582970 | hsa-miR-320e | 80397886 | 80397892 | 7mer-m8 | 80397876 | 80397893 | 154 | -15.83 |
CAediting_688080 | chr9_63819626_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-4477b | 80394611 | 80394617 | 7mer-m8 | 80394597 | 80394618 | 148 | -13.83 |
CAediting_1054808 | chr15_66496985_- | ENSG00000173821.18 | ENST00000582970 | hsa-miR-4512 | 80396885 | 80396890 | 6mer | 80396869 | 80396891 | 147 | -26.37 |
CAediting_1524209 | chrX_134546392_- | ENSG00000173821.18 | ENST00000582970 | hsa-miR-503-5p | 80395300 | 80395306 | 7mer-1a | 80395282 | 80395306 | 140 | -22.02 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-548aa | 80398130 | 80398136 | 7mer-m8 | 80398114 | 80398137 | 148 | -9.72 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-548aa | 80398130 | 80398136 | 7mer-m8 | 80398114 | 80398137 | 148 | -9.72 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-548aa | 80398130 | 80398136 | 7mer-m8 | 80398114 | 80398137 | 148 | -9.72 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-548aa | 80398170 | 80398176 | 7mer-m8 | 80398155 | 80398177 | 154 | -6.87 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-548aa | 80398170 | 80398176 | 7mer-m8 | 80398155 | 80398177 | 154 | -6.87 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-548aa | 80398170 | 80398176 | 7mer-m8 | 80398155 | 80398177 | 154 | -6.87 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-548aa | 80398587 | 80398594 | 8mer-1a | 80398569 | 80398594 | 143 | -8.07 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-548aa | 80398587 | 80398594 | 8mer-1a | 80398569 | 80398594 | 143 | -8.07 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-548aa | 80398587 | 80398594 | 8mer-1a | 80398569 | 80398594 | 143 | -8.07 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-548aa | 80394179 | 80394185 | 7mer-m8 | 80394163 | 80394186 | 142 | -8.22 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-548aa | 80394179 | 80394185 | 7mer-m8 | 80394163 | 80394186 | 142 | -8.22 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-548aa | 80394179 | 80394185 | 7mer-m8 | 80394163 | 80394186 | 142 | -8.22 |
CAediting_228905 | chr2_188297554_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-561-3p | 80398434 | 80398440 | 7mer-m8 | 80398418 | 80398441 | 152 | -15.11 |
CAediting_524911 | chr7_5495852_- | ENSG00000173821.18 | ENST00000582970 | hsa-miR-589-3p | 80393698 | 80393705 | 8mer-1a | 80393677 | 80393705 | 144 | -17.78 |
CAediting_524911 | chr7_5495852_- | ENSG00000173821.18 | ENST00000582970 | hsa-miR-589-3p | 80397539 | 80397545 | 7mer-m8 | 80397522 | 80397546 | 149 | -11.57 |
CAediting_748296 | chr10_51299626_+ | ENSG00000173821.18 | ENST00000582970 | hsa-miR-605-3p | 80395457 | 80395464 | 8mer-1a | 80395443 | 80395464 | 143 | -12.34 |
CAediting_1351755 | chr19_40282625_- | ENSG00000173821.18 | ENST00000319921 | hsa-miR-641 | 80321131 | 80321137 | 7mer-m8 | 80321115 | 80321138 | 148 | -11.34 |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for RNF213 |
- RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
RNA A-to-I editing in RNA structures for Minimum free energy (MFE). |
CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for RNF213 |
Correlation between ADAR gene expression and RNA editing frequency |
Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
BLCA | CAediting_1244713 | chr17_80320383_+ | . | . | 0.00721793264968549 | 0.267119885632382 | . | . |
BRCA | CAediting_1244713 | chr17_80320383_+ | 2.45865114356032e-05 | 0.214588466352321 | . | . | . | . |
LUAD | CAediting_1244713 | chr17_80320383_+ | 0.00892071188070217 | 0.20179037119269 | . | . | . | . |
LUSC | CAediting_1244713 | chr17_80320383_+ | 0.00211685608835226 | 0.269252652770234 | . | . | 0.0431903621150774 | 0.179019017005359 |
STAD | CAediting_1244713 | chr17_80320383_+ | . | . | 0.0199403677596874 | 0.224757826558314 | . | . |
THCA | CAediting_1244713 | chr17_80320383_+ | . | . | . | . | 0.0276089605419919 | 0.291849314852645 |
UCEC | CAediting_1244713 | chr17_80320383_+ | 0.000191599981377881 | 0.494918780713727 | . | . | . | . |
KIRP | CAediting_1244713 | chr17_80320383_+ | . | . | 0.00013407095633248 | 0.311890242790219 | . | . |
ESCA | CAediting_1244713 | chr17_80320383_+ | . | . | 0.0308029745947931 | 0.262152343279113 | . | . |
SKCM | CAediting_1244713 | chr17_80320383_+ | 0.00835939517373142 | 0.202261432713822 | 0.0104292396758184 | 0.196553259069239 | . | . |
SARC | CAediting_1244713 | chr17_80320383_+ | 0.000394023921307181 | 0.429766201158934 | 0.012645398853223 | 0.310087125048361 | . | . |
BLCA | CAediting_1244718 | chr17_80320453_+ | 0.000457539275186698 | 0.365772661204671 | 0.0277353900152018 | 0.234696475773153 | . | . |
BRCA | CAediting_1244718 | chr17_80320453_+ | 7.31419431769765e-13 | 0.406109325356373 | . | . | . | . |
CESC | CAediting_1244718 | chr17_80320453_+ | 4.43245046490571e-05 | 0.467837579575661 | . | . | . | . |
LUAD | CAediting_1244718 | chr17_80320453_+ | 0.000676469256185218 | 0.323505513252415 | . | . | . | . |
LUSC | CAediting_1244718 | chr17_80320453_+ | 3.77003767273624e-09 | 0.53177745291618 | . | . | . | . |
HNSC | CAediting_1244718 | chr17_80320453_+ | 0.0002750668181729 | 0.396168988017223 | . | . | . | . |
STAD | CAediting_1244718 | chr17_80320453_+ | 0.000450402900781581 | 0.308009413262214 | . | . | . | . |
KIRC | CAediting_1244718 | chr17_80320453_+ | 0.000100943222077546 | 0.298061098579378 | . | . | . | . |
UCEC | CAediting_1244718 | chr17_80320453_+ | 0.0204757748272795 | 0.311819949211329 | . | . | . | . |
KIRP | CAediting_1244718 | chr17_80320453_+ | 0.00146272708923233 | 0.262779005430173 | . | . | . | . |
OV | CAediting_1244718 | chr17_80320453_+ | 4.2828157251545e-07 | 0.329440816607344 | . | . | . | . |
SKCM | CAediting_1244718 | chr17_80320453_+ | 1.31482450068527e-09 | 0.478475037384298 | . | . | . | . |
BLCA | CAediting_1244731 | chr17_80320664_+ | 9.77909874428934e-05 | 0.313719560479091 | 0.0092995823910441 | 0.212420730609768 | . | . |
BRCA | CAediting_1244731 | chr17_80320664_+ | 3.88425506270301e-13 | 0.328503587889433 | . | . | . | . |
CESC | CAediting_1244731 | chr17_80320664_+ | 0.0140186325462904 | 0.234725996963932 | . | . | . | . |
LUAD | CAediting_1244731 | chr17_80320664_+ | 0.0287002914157865 | 0.15357429819835 | . | . | . | . |
LUSC | CAediting_1244731 | chr17_80320664_+ | 8.51948271486745e-05 | 0.281145165478206 | . | . | . | . |
HNSC | CAediting_1244731 | chr17_80320664_+ | 0.000354193430355169 | 0.271605494751939 | . | . | . | . |
STAD | CAediting_1244731 | chr17_80320664_+ | 0.00800947376859044 | 0.287493380318877 | . | . | . | . |
KIRC | CAediting_1244731 | chr17_80320664_+ | 0.00610636607304298 | 0.160388153796226 | . | . | . | . |
UCEC | CAediting_1244731 | chr17_80320664_+ | 0.0294101756984849 | 0.253347931860815 | . | . | . | . |
KIRP | CAediting_1244731 | chr17_80320664_+ | 0.0256838435410193 | 0.153585522343572 | 0.000739371806506014 | 0.230545501416767 | . | . |
ESCA | CAediting_1244731 | chr17_80320664_+ | 0.0442602808296781 | 0.222766028887391 | . | . | . | . |
OV | CAediting_1244731 | chr17_80320664_+ | 0.0113111469743939 | 0.18104981966401 | . | . | . | . |
SKCM | CAediting_1244731 | chr17_80320664_+ | 4.29576295249431e-08 | 0.350823485346921 | 0.0110908969007698 | 0.166840175197648 | . | . |
SARC | CAediting_1244731 | chr17_80320664_+ | 0.000990206986083389 | 0.347055646225586 | 0.0229478040407531 | 0.243667540882618 | . | . |
BRCA | CAediting_1244735 | chr17_80320725_+ | 1.22603257552255e-05 | 0.309810634236767 | . | . | . | . |
CESC | CAediting_1244735 | chr17_80320725_+ | 0.01343803974061 | 0.325652753345002 | . | . | . | . |
BLCA | CAediting_1244737 | chr17_80320743_+ | 1.10937929571656e-07 | 0.41069718562092 | . | . | . | . |
LGG | CAediting_1244737 | chr17_80320743_+ | 0.00123890069155135 | 0.32823658070564 | . | . | . | . |
BRCA | CAediting_1244737 | chr17_80320743_+ | 5.21474818263031e-19 | 0.399428489662184 | . | . | . | . |
CESC | CAediting_1244737 | chr17_80320743_+ | 6.01218916384002e-05 | 0.349585495304438 | . | . | . | . |
LUAD | CAediting_1244737 | chr17_80320743_+ | 7.64401197354272e-06 | 0.320703474586254 | . | . | . | . |
LUSC | CAediting_1244737 | chr17_80320743_+ | 7.40834800112449e-05 | 0.284902508676724 | . | . | . | . |
HNSC | CAediting_1244737 | chr17_80320743_+ | 1.25007873589269e-06 | 0.361785739089577 | . | . | . | . |
STAD | CAediting_1244737 | chr17_80320743_+ | 0.00545832834268744 | 0.271929067724581 | . | . | . | . |
THCA | CAediting_1244737 | chr17_80320743_+ | 0.0201259787365131 | 0.214646974529498 | . | . | . | . |
KIRC | CAediting_1244737 | chr17_80320743_+ | 2.18762614607743e-05 | 0.262436700841308 | . | . | . | . |
UCEC | CAediting_1244737 | chr17_80320743_+ | 6.1118070615129e-05 | 0.405363950483928 | . | . | . | . |
KIRP | CAediting_1244737 | chr17_80320743_+ | 0.00343637238069209 | 0.198242192743235 | . | . | . | . |
OV | CAediting_1244737 | chr17_80320743_+ | 1.42256788684116e-05 | 0.282500386304905 | . | . | . | . |
SKCM | CAediting_1244737 | chr17_80320743_+ | 5.41859520389762e-08 | 0.33810955087245 | . | . | . | . |
SARC | CAediting_1244737 | chr17_80320743_+ | 1.64800991335937e-07 | 0.528924635462068 | . | . | . | . |
BLCA | CAediting_1244738 | chr17_80320744_+ | 5.07185356081608e-08 | 0.409777698652984 | . | . | . | . |
LGG | CAediting_1244738 | chr17_80320744_+ | 0.00211483459450878 | 0.311581382926564 | . | . | . | . |
BRCA | CAediting_1244738 | chr17_80320744_+ | 7.3875210951397e-14 | 0.337586092526893 | . | . | . | . |
CESC | CAediting_1244738 | chr17_80320744_+ | 6.0238323434521e-06 | 0.390902694523696 | . | . | . | . |
LUAD | CAediting_1244738 | chr17_80320744_+ | 0.003714456376326 | 0.208989769734571 | . | . | . | . |
LUSC | CAediting_1244738 | chr17_80320744_+ | 3.69529987049938e-05 | 0.291631497743529 | . | . | . | . |
HNSC | CAediting_1244738 | chr17_80320744_+ | 9.99515230458289e-05 | 0.288254048292115 | . | . | . | . |
THCA | CAediting_1244738 | chr17_80320744_+ | 0.00877954335628773 | 0.232562316081393 | . | . | . | . |
KIRC | CAediting_1244738 | chr17_80320744_+ | 0.00420550126748667 | 0.168192211444066 | . | . | . | . |
UCEC | CAediting_1244738 | chr17_80320744_+ | 0.00033324091796906 | 0.366009744672523 | . | . | . | . |
KIRP | CAediting_1244738 | chr17_80320744_+ | 6.04468198323656e-05 | 0.262411159763009 | . | . | . | . |
OV | CAediting_1244738 | chr17_80320744_+ | 1.6289763437197e-06 | 0.307461874802205 | . | . | . | . |
SKCM | CAediting_1244738 | chr17_80320744_+ | 1.67433795128561e-11 | 0.40314771313621 | . | . | . | . |
SARC | CAediting_1244738 | chr17_80320744_+ | 4.40103118811826e-05 | 0.412444178553789 | . | . | . | . |
LUAD | CAediting_1244757 | chr17_80320889_+ | 0.00723579598176195 | 0.218466167291993 | . | . | . | . |
UCEC | CAediting_1244757 | chr17_80320889_+ | 0.0291995339356632 | 0.299775225532709 | . | . | . | . |
BLCA | CAediting_1244763 | chr17_80320928_+ | 0.000550168385761758 | 0.262271895789869 | . | . | . | . |
LGG | CAediting_1244763 | chr17_80320928_+ | 0.00446530883873205 | 0.303762660352708 | . | . | . | . |
BRCA | CAediting_1244763 | chr17_80320928_+ | 6.60133107339975e-13 | 0.330189084922408 | . | . | . | . |
LUAD | CAediting_1244763 | chr17_80320928_+ | 0.000236292372033043 | 0.255338087779672 | . | . | . | . |
LUSC | CAediting_1244763 | chr17_80320928_+ | 1.42174615653481e-07 | 0.375214035121587 | . | . | . | . |
GBM | CAediting_1244763 | chr17_80320928_+ | 0.00102433105503691 | 0.404015716215347 | . | . | . | . |
HNSC | CAediting_1244763 | chr17_80320928_+ | 0.00227633610854649 | 0.231872661255831 | . | . | . | . |
STAD | CAediting_1244763 | chr17_80320928_+ | 0.00471043077904216 | 0.223758787545024 | . | . | . | . |
THCA | CAediting_1244763 | chr17_80320928_+ | 0.00590336953716157 | 0.256353016266308 | . | . | . | . |
KIRC | CAediting_1244763 | chr17_80320928_+ | 0.029661470442031 | 0.125786286380647 | . | . | . | . |
UCEC | CAediting_1244763 | chr17_80320928_+ | 9.19185776779163e-05 | 0.359531613019836 | . | . | . | . |
KIRP | CAediting_1244763 | chr17_80320928_+ | 0.000247708321315753 | 0.236904544998659 | . | . | . | . |
OV | CAediting_1244763 | chr17_80320928_+ | 4.69831075372963e-09 | 0.35003200960649 | . | . | . | . |
SKCM | CAediting_1244763 | chr17_80320928_+ | 6.19507252799652e-11 | 0.398315622802745 | . | . | . | . |
MESO | CAediting_1244763 | chr17_80320928_+ | 0.000664753418519893 | 0.465170255568785 | . | . | . | . |
SARC | CAediting_1244763 | chr17_80320928_+ | 0.00210775585445581 | 0.318281235567897 | . | . | . | . |
LUAD | CAediting_1244764 | chr17_80320932_+ | 0.0468048540791464 | 0.225832621969585 | . | . | . | . |
BLCA | CAediting_1244767 | chr17_80320942_+ | 0.00532521359735489 | 0.244007906574881 | . | . | 0.0287093399720096 | 0.192661781037992 |
BRCA | CAediting_1244767 | chr17_80320942_+ | 6.2245291202399e-06 | 0.242636655283719 | . | . | . | . |
CESC | CAediting_1244767 | chr17_80320942_+ | 0.00701650939113451 | 0.272085794020922 | . | . | . | . |
LUAD | CAediting_1244767 | chr17_80320942_+ | 0.00914792052726563 | 0.206756279897817 | . | . | . | . |
LUSC | CAediting_1244767 | chr17_80320942_+ | 0.0160996820117911 | 0.218405059511792 | . | . | . | . |
HNSC | CAediting_1244767 | chr17_80320942_+ | 0.0395064078512958 | 0.190640318010028 | . | . | . | . |
STAD | CAediting_1244767 | chr17_80320942_+ | 0.0194710643404915 | 0.17549191218287 | . | . | . | . |
UCEC | CAediting_1244767 | chr17_80320942_+ | 0.000342732384983614 | 0.357951008743369 | . | . | . | . |
KIRP | CAediting_1244767 | chr17_80320942_+ | . | . | 3.65682262098167e-05 | 0.282100997650651 | . | . |
OV | CAediting_1244767 | chr17_80320942_+ | 6.6101854610169e-06 | 0.265152867667743 | . | . | . | . |
SKCM | CAediting_1244767 | chr17_80320942_+ | 1.67192205941982e-06 | 0.338493274884021 | 0.0438908275890196 | 0.145986024721697 | . | . |
BRCA | CAediting_1244772 | chr17_80320958_+ | . | . | . | . | 0.0228727372495076 | 0.174473410141237 |
SKCM | CAediting_1244772 | chr17_80320958_+ | . | . | 7.97769354960256e-08 | 0.554214046609149 | 0.00584349562629364 | 0.303720680000807 |
BLCA | CAediting_1244776 | chr17_80320974_+ | 0.0143950221936887 | 0.191381180293893 | . | . | . | . |
BRCA | CAediting_1244776 | chr17_80320974_+ | 3.73440406432832e-06 | 0.209332849677666 | . | . | . | . |
LUAD | CAediting_1244776 | chr17_80320974_+ | 0.00355184946506865 | 0.198932950119158 | . | . | . | . |
LUSC | CAediting_1244776 | chr17_80320974_+ | 0.0019424322865074 | 0.22520542085733 | 4.91179334773482e-09 | 0.411462070940069 | . | . |
KIRP | CAediting_1244776 | chr17_80320974_+ | . | . | 1.62490415547847e-08 | 0.385283102630846 | . | . |
OV | CAediting_1244776 | chr17_80320974_+ | 0.000355548471115147 | 0.226335945343165 | . | . | . | . |
SKCM | CAediting_1244776 | chr17_80320974_+ | . | . | 4.31458093806385e-10 | 0.392805716125715 | . | . |
MESO | CAediting_1244776 | chr17_80320974_+ | . | . | 0.0018163774756345 | 0.422324897069001 | . | . |
SARC | CAediting_1244776 | chr17_80320974_+ | . | . | 0.00103268082819983 | 0.302115675437071 | . | . |
BLCA | CAediting_1244777 | chr17_80320975_+ | 0.000584046015523651 | 0.308182552139943 | . | . | . | . |
LGG | CAediting_1244777 | chr17_80320975_+ | 0.000523331821826119 | 0.376931062595601 | . | . | . | . |
BRCA | CAediting_1244777 | chr17_80320975_+ | 5.87892287450834e-12 | 0.334381225316577 | . | . | . | . |
LUAD | CAediting_1244777 | chr17_80320975_+ | 0.000158784712648921 | 0.272768198511461 | . | . | . | . |
LUSC | CAediting_1244777 | chr17_80320975_+ | 0.0103988177009605 | 0.240170289329808 | 0.00507333250005453 | 0.261915661440317 | . | . |
STAD | CAediting_1244777 | chr17_80320975_+ | . | . | 0.00116121809409387 | 0.301767594034626 | . | . |
UCEC | CAediting_1244777 | chr17_80320975_+ | 0.00379991585198978 | 0.320072243036678 | . | . | . | . |
KIRP | CAediting_1244777 | chr17_80320975_+ | . | . | 0.00646253681821679 | 0.239546378168404 | . | . |
OV | CAediting_1244777 | chr17_80320975_+ | 0.0215096021897208 | 0.156365445552981 | . | . | . | . |
SKCM | CAediting_1244777 | chr17_80320975_+ | 0.0116307602149804 | 0.182710976463692 | 4.27219786999252e-05 | 0.292301434597672 | . | . |
SARC | CAediting_1244777 | chr17_80320975_+ | . | . | 6.89265387927831e-05 | 0.400690570907703 | . | . |
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Relation with cancer stages for RNF213 |
Correlation between Cancer stages and RNA editing frequency |
Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
BLCA | pathologic_stage | CAediting_1244735 | chr17_80320725_+ | 0.00433632561681796 | 0.344258395422528 |
BLCA | pathologic_stage | CAediting_1244737 | chr17_80320743_+ | 0.0264317310036601 | 0.178311313989877 |
BLCA | pathologic_stage | CAediting_1244763 | chr17_80320928_+ | 0.00419968724435994 | 0.219155306231781 |
BLCA | pathologic_stage | CAediting_1244767 | chr17_80320942_+ | 0.0053991129880707 | 0.244567557190104 |
BRCA | pathologic_stage | CAediting_1244731 | chr17_80320664_+ | 0.039925115239111 | 0.0966778608639662 |
BRCA | pathologic_stage | CAediting_1244737 | chr17_80320743_+ | 0.0397321596488798 | 0.0970945480899798 |
BRCA | pathologic_stage | CAediting_1244757 | chr17_80320889_+ | 0.0447305669870902 | 0.123880915992504 |
CESC | clinical_stage | CAediting_1244731 | chr17_80320664_+ | 0.0364065203523407 | 0.204478161340196 |
ESCA | pathologic_stage | CAediting_1244738 | chr17_80320744_+ | 0.00263293997135872 | 0.333936692856846 |
KIRC | pathologic_stage | CAediting_1244718 | chr17_80320453_+ | 0.0484362959580919 | 0.154361814324329 |
KIRC | pathologic_stage | CAediting_1244735 | chr17_80320725_+ | 0.0488273070540201 | 0.192762020659868 |
KIRC | pathologic_stage | CAediting_1244737 | chr17_80320743_+ | 0.00780437622599477 | 0.166910652486492 |
KIRC | pathologic_stage | CAediting_1244763 | chr17_80320928_+ | 0.000823521992207993 | 0.193067923195626 |
KIRP | clinical_stage | CAediting_1244718 | chr17_80320453_+ | 0.0227095594908153 | 0.22999805654308 |
KIRP | clinical_stage | CAediting_1244737 | chr17_80320743_+ | 0.0366869624448257 | 0.170191037709452 |
KIRP | clinical_stage | CAediting_1244738 | chr17_80320744_+ | 0.0255984130547185 | 0.176471189464794 |
KIRP | clinical_stage | CAediting_1244763 | chr17_80320928_+ | 0.000877298456745661 | 0.25815964818425 |
KIRP | pathologic_stage | CAediting_1244718 | chr17_80320453_+ | 0.00285337362911062 | 0.257697189114572 |
KIRP | pathologic_stage | CAediting_1244737 | chr17_80320743_+ | 0.010101242728696 | 0.182887392098125 |
KIRP | pathologic_stage | CAediting_1244738 | chr17_80320744_+ | 0.000879258146450058 | 0.228423000813885 |
KIRP | pathologic_stage | CAediting_1244757 | chr17_80320889_+ | 0.0485437389231046 | 0.22557914513561 |
KIRP | pathologic_stage | CAediting_1244763 | chr17_80320928_+ | 5.27289376878519e-05 | 0.271494600476858 |
KIRP | pathologic_stage | CAediting_1244772 | chr17_80320958_+ | 0.0157449710000184 | -0.336550859334052 |
STAD | pathologic_stage | CAediting_1244737 | chr17_80320743_+ | 0.0488666667216698 | -0.196528125266845 |
STAD | pathologic_stage | CAediting_1244757 | chr17_80320889_+ | 0.0455990907017875 | 0.214921439322835 |
STAD | pathologic_stage | CAediting_1244764 | chr17_80320932_+ | 0.0215704723775821 | -0.265020295785457 |
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Relation with survival for RNF213 |
Correlation between RNA editing and survival |
Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
HNSC | CAediting_1244763 | chr17_80320928_+ | 0.0251497847675902 | 0.0438581 | 4.19335 |
KIRC | CAediting_1244776 | chr17_80320974_+ | 0.0231683382885464 | 0.0268895 | 4.82355 |
UCEC | CAediting_1244731 | chr17_80320664_+ | 0.0262514920464476 | 0.0290942 | 27.7349 |
UCEC | CAediting_1244767 | chr17_80320942_+ | 0.0266596527590282 | 0.00933266 | 44.0138 |
OV | CAediting_1244744 | chr17_80320793_+ | 0.0220395764851473 | 0.0140801 | 0.0355925 |
OV | CAediting_1244777 | chr17_80320975_+ | 0.0435117254061543 | 0.0187157 | 6.54032 |
SARC | CAediting_1244738 | chr17_80320744_+ | 0.0421112456031624 | 0.0486725 | 0.0699092 |
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RelatedDrugs for RNF213 |
Approved drugs targeting this gene. (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for RNF213 |
Diseases associated with this gene. (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
RNF213 | C1846689 | MOYAMOYA DISEASE 2 | 9 | CTD_human;UNIPROT |
RNF213 | C0026654 | Moyamoya Disease | 3 | ORPHANET |
RNF213 | C2931384 | Moyamoya disease 1 | 3 | ORPHANET |