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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: KLHL42 (CAeditome ID:57542)

Gene summary for KLHL42

check button Gene summary
Gene informationGene symbol

KLHL42

Gene ID

57542

Gene namekelch like family member 42
SynonymsCtb9|KLHDC5
Cytomap

12p11.22

Type of geneprotein-coding
Descriptionkelch-like protein 42cullin-3-binding protein 9kelch domain containing 5kelch domain-containing protein 5
Modification date20210518
UniProtAcc

Q9P2K6

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
KLHL42

GO:0004842

Kelch-like protein 42

19261606

KLHL42

GO:0000209

Kelch-like protein 42

19261606

KLHL42

GO:0043161

Kelch-like protein 42

19261606

KLHL42

GO:0031463

Kelch-like protein 42

19261606


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RNA A-to-I events for KLHL42

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000087448.8
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_875954(27784493, +), CAediting_875955(27784529, +), CAediting_875956(27785220, +), CAediting_875957(27785269, +), CAediting_875958(27785270, +), CAediting_875959(27785274, +), CAediting_875960(27785299, +), CAediting_875961(27785303, +), CAediting_875962(27785414, +), CAediting_875963(27786786, +), CAediting_875964(27787308, +), CAediting_875965(27787309, +), CAediting_875966(27787374, +), CAediting_875967(27787380, +), CAediting_875968(27787384, +), CAediting_875969(27787444, +), CAediting_875970(27787445, +), CAediting_875971(27790816, +), CAediting_875972(27790817, +), CAediting_875973(27790934, +), CAediting_875974(27790940, +), CAediting_875975(27790946, +), CAediting_875976(27790981, +), CAediting_875977(27791006, +), CAediting_875978(27792527, +), CAediting_875979(27792543, +), CAediting_875980(27792549, +), CAediting_875981(27792563, +), CAediting_875982(27792588, +), CAediting_875983(27792604, +), CAediting_875984(27792623, +), CAediting_875985(27792624, +), CAediting_875986(27792641, +), CAediting_875987(27792649, +), CAediting_875988(27792653, +), CAediting_875989(27792663, +), CAediting_875990(27792665, +), CAediting_875991(27792675, +), CAediting_875992(27792703, +), CAediting_875993(27792706, +), CAediting_875994(27792708, +), CAediting_875995(27792720, +), CAediting_875996(27792723, +), CAediting_875997(27792757, +), CAediting_875998(27792762, +), CAediting_875999(27792784, +), CAediting_876000(27792940, +), CAediting_876001(27792941, +), CAediting_876002(27792984, +), CAediting_876003(27792989, +), CAediting_876004(27793012, +), CAediting_876005(27793024, +), CAediting_876006(27793032, +), CAediting_876007(27793136, +), CAediting_876008(27793147, +), CAediting_876009(27793152, +), CAediting_876010(27793153, +), CAediting_876011(27793157, +), CAediting_876012(27793160, +), CAediting_876013(27793168, +), CAediting_876014(27793178, +), CAediting_876015(27793200, +), CAediting_876016(27793205, +), CAediting_876017(27793210, +), CAediting_876018(27793220, +), CAediting_876019(27793221, +), CAediting_876020(27793225, +), CAediting_876021(27793229, +), CAediting_876022(27793242, +), CAediting_876023(27793243, +), CAediting_876024(27793244, +), CAediting_876025(27793245, +), CAediting_876026(27793246, +), CAediting_876027(27793253, +), CAediting_876028(27793254, +), CAediting_876029(27793255, +), CAediting_876030(27793258, +), CAediting_876031(27793274, +), CAediting_876032(27793284, +), CAediting_876033(27793290, +), CAediting_876034(27793301, +), CAediting_876035(27793307, +), CAediting_876036(27793311, +), CAediting_876037(27793320, +), CAediting_876038(27793325, +), CAediting_876039(27793338, +), CAediting_876040(27793339, +), CAediting_876041(27793343, +), CAediting_876042(27793361, +), CAediting_876043(27793362, +), CAediting_876044(27793375, +), CAediting_876045(27793377, +), CAediting_876046(27793382, +), CAediting_876047(27793384, +), CAediting_876048(27793385, +), CAediting_876049(27793387, +), CAediting_876050(27793388, +), CAediting_876051(27793389, +), CAediting_876052(27793391, +), CAediting_876053(27793392, +), CAediting_876054(27793393, +), CAediting_876055(27793396, +), CAediting_876056(27793412, +), CAediting_876057(27793422, +), CAediting_876058(27793428, +), CAediting_876059(27793432, +), CAediting_876060(27793439, +), CAediting_876061(27793445, +), CAediting_876062(27793449, +), CAediting_876063(27793452, +), CAediting_876064(27793467, +), CAediting_876065(27793476, +), CAediting_876066(27793483, +), CAediting_876067(27793487, +), CAediting_876068(27793491, +), CAediting_876069(27793494, +), CAediting_876070(27793512, +), CAediting_876071(27793526, +), CAediting_876072(27793563, +), CAediting_876073(27793565, +), CAediting_876074(27793566, +), CAediting_876075(27794467, +), CAediting_876076(27794547, +), CAediting_876077(27794553, +), CAediting_876078(27794561, +), CAediting_876079(27794571, +), CAediting_876080(27794577, +), CAediting_876081(27794591, +), CAediting_876082(27794603, +), CAediting_876083(27794617, +), CAediting_876084(27794630, +), CAediting_876085(27796649, +), CAediting_876086(27796656, +), CAediting_876087(27796659, +), CAediting_876088(27796664, +), CAediting_876089(27796672, +), CAediting_876090(27796684, +), CAediting_876091(27796688, +), CAediting_876092(27796702, +), CAediting_876093(27796731, +), CAediting_876094(27796732, +), CAediting_876095(27796745, +), CAediting_876096(27796762, +), CAediting_876097(27796765, +), CAediting_876098(27796775, +), CAediting_876099(27796777, +), CAediting_876100(27796785, +), CAediting_876101(27796788, +), CAediting_876102(27796802, +), CAediting_876103(27796818, +), CAediting_876104(27796824, +), CAediting_876105(27796834, +), CAediting_876106(27796837, +), CAediting_876107(27796839, +), CAediting_876108(27796846, +), CAediting_876109(27796859, +), CAediting_876110(27796900, +), CAediting_876111(27796912, +), CAediting_876112(27800721, +), CAediting_876113(27800730, +), CAediting_876114(27800731, +),

Top

RNA editing positional annotations for KLHL42 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_875954chr12_27784493_+intronic
CAediting_875955chr12_27784529_+intronic
CAediting_875956chr12_27785220_+intronic
CAediting_875957chr12_27785269_+intronic
CAediting_875958chr12_27785270_+intronic
CAediting_875959chr12_27785274_+intronic
CAediting_875960chr12_27785299_+intronic
CAediting_875961chr12_27785303_+intronic
CAediting_875962chr12_27785414_+intronic
CAediting_875963chr12_27786786_+intronic
CAediting_875964chr12_27787308_+intronic
CAediting_875965chr12_27787309_+intronic
CAediting_875966chr12_27787374_+intronic
CAediting_875967chr12_27787380_+intronic
CAediting_875968chr12_27787384_+intronic
CAediting_875969chr12_27787444_+intronic
CAediting_875970chr12_27787445_+intronic
CAediting_875971chr12_27790816_+ncRNA_intronic
CAediting_875972chr12_27790817_+ncRNA_intronic
CAediting_875973chr12_27790934_+ncRNA_intronic
CAediting_875974chr12_27790940_+ncRNA_intronic
CAediting_875975chr12_27790946_+ncRNA_intronic
CAediting_875976chr12_27790981_+ncRNA_intronic
CAediting_875977chr12_27791006_+ncRNA_intronic
CAediting_875978chr12_27792527_+intronic
CAediting_875979chr12_27792543_+intronic
CAediting_875980chr12_27792549_+intronic
CAediting_875981chr12_27792563_+intronic
CAediting_875982chr12_27792588_+intronic
CAediting_875983chr12_27792604_+intronic
CAediting_875984chr12_27792623_+intronic
CAediting_875985chr12_27792624_+intronic
CAediting_875986chr12_27792641_+intronic
CAediting_875987chr12_27792649_+intronic
CAediting_875988chr12_27792653_+intronic
CAediting_875989chr12_27792663_+intronic
CAediting_875990chr12_27792665_+intronic
CAediting_875991chr12_27792675_+intronic
CAediting_875992chr12_27792703_+intronic
CAediting_875993chr12_27792706_+intronic
CAediting_875994chr12_27792708_+intronic
CAediting_875995chr12_27792720_+intronic
CAediting_875996chr12_27792723_+intronic
CAediting_875997chr12_27792757_+intronic
CAediting_875998chr12_27792762_+intronic
CAediting_875999chr12_27792784_+intronic
CAediting_876000chr12_27792940_+intronic
CAediting_876001chr12_27792941_+intronic
CAediting_876002chr12_27792984_+intronic
CAediting_876003chr12_27792989_+intronic
CAediting_876004chr12_27793012_+intronic
CAediting_876005chr12_27793024_+intronic
CAediting_876006chr12_27793032_+intronic
CAediting_876007chr12_27793136_+intronic
CAediting_876008chr12_27793147_+intronic
CAediting_876009chr12_27793152_+intronic
CAediting_876010chr12_27793153_+intronic
CAediting_876011chr12_27793157_+intronic
CAediting_876012chr12_27793160_+intronic
CAediting_876013chr12_27793168_+intronic
CAediting_876014chr12_27793178_+intronic
CAediting_876015chr12_27793200_+intronic
CAediting_876016chr12_27793205_+intronic
CAediting_876017chr12_27793210_+intronic
CAediting_876018chr12_27793220_+intronic
CAediting_876019chr12_27793221_+intronic
CAediting_876020chr12_27793225_+intronic
CAediting_876021chr12_27793229_+intronic
CAediting_876022chr12_27793242_+intronic
CAediting_876023chr12_27793243_+intronic
CAediting_876024chr12_27793244_+intronic
CAediting_876025chr12_27793245_+intronic
CAediting_876026chr12_27793246_+intronic
CAediting_876027chr12_27793253_+intronic
CAediting_876028chr12_27793254_+intronic
CAediting_876029chr12_27793255_+intronic
CAediting_876030chr12_27793258_+intronic
CAediting_876031chr12_27793274_+intronic
CAediting_876032chr12_27793284_+intronic
CAediting_876033chr12_27793290_+intronic
CAediting_876034chr12_27793301_+intronic
CAediting_876035chr12_27793307_+intronic
CAediting_876036chr12_27793311_+intronic
CAediting_876037chr12_27793320_+intronic
CAediting_876038chr12_27793325_+intronic
CAediting_876039chr12_27793338_+intronic
CAediting_876040chr12_27793339_+intronic
CAediting_876041chr12_27793343_+intronic
CAediting_876042chr12_27793361_+intronic
CAediting_876043chr12_27793362_+intronic
CAediting_876044chr12_27793375_+intronic
CAediting_876045chr12_27793377_+intronic
CAediting_876046chr12_27793382_+intronic
CAediting_876047chr12_27793384_+intronic
CAediting_876048chr12_27793385_+intronic
CAediting_876049chr12_27793387_+intronic
CAediting_876050chr12_27793388_+intronic
CAediting_876051chr12_27793389_+intronic
CAediting_876052chr12_27793391_+intronic
CAediting_876053chr12_27793392_+intronic
CAediting_876054chr12_27793393_+intronic
CAediting_876055chr12_27793396_+intronic
CAediting_876056chr12_27793412_+intronic
CAediting_876057chr12_27793422_+intronic
CAediting_876058chr12_27793428_+intronic
CAediting_876059chr12_27793432_+intronic
CAediting_876060chr12_27793439_+intronic
CAediting_876061chr12_27793445_+intronic
CAediting_876062chr12_27793449_+intronic
CAediting_876063chr12_27793452_+intronic
CAediting_876064chr12_27793467_+intronic
CAediting_876065chr12_27793476_+intronic
CAediting_876066chr12_27793483_+intronic
CAediting_876067chr12_27793487_+intronic
CAediting_876068chr12_27793491_+intronic
CAediting_876069chr12_27793494_+intronic
CAediting_876070chr12_27793512_+intronic
CAediting_876071chr12_27793526_+intronic
CAediting_876072chr12_27793563_+intronic
CAediting_876073chr12_27793565_+intronic
CAediting_876074chr12_27793566_+intronic
CAediting_876075chr12_27794467_+intronic
CAediting_876076chr12_27794547_+intronic
CAediting_876077chr12_27794553_+intronic
CAediting_876078chr12_27794561_+intronic
CAediting_876079chr12_27794571_+intronic
CAediting_876080chr12_27794577_+intronic
CAediting_876081chr12_27794591_+intronic
CAediting_876082chr12_27794603_+intronic
CAediting_876083chr12_27794617_+intronic
CAediting_876084chr12_27794630_+intronic
CAediting_876085chr12_27796649_+intronic
CAediting_876086chr12_27796656_+intronic
CAediting_876087chr12_27796659_+intronic
CAediting_876088chr12_27796664_+intronic
CAediting_876089chr12_27796672_+intronic
CAediting_876090chr12_27796684_+intronic
CAediting_876091chr12_27796688_+intronic
CAediting_876092chr12_27796702_+intronic
CAediting_876093chr12_27796731_+intronic
CAediting_876094chr12_27796732_+intronic
CAediting_876095chr12_27796745_+intronic
CAediting_876096chr12_27796762_+intronic
CAediting_876097chr12_27796765_+intronic
CAediting_876098chr12_27796775_+intronic
CAediting_876099chr12_27796777_+intronic
CAediting_876100chr12_27796785_+intronic
CAediting_876101chr12_27796788_+intronic
CAediting_876102chr12_27796802_+intronic
CAediting_876103chr12_27796818_+intronic
CAediting_876104chr12_27796824_+intronic
CAediting_876105chr12_27796834_+intronic
CAediting_876106chr12_27796837_+intronic
CAediting_876107chr12_27796839_+intronic
CAediting_876108chr12_27796846_+intronic
CAediting_876109chr12_27796859_+intronic
CAediting_876110chr12_27796900_+intronic
CAediting_876111chr12_27796912_+intronic
CAediting_876112chr12_27800721_+UTR3
CAediting_876113chr12_27800730_+UTR3
CAediting_876114chr12_27800731_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_875954chr12_27784493_+SINEAluFAM
CAediting_875955chr12_27784529_+SINEAluFAM
CAediting_875956chr12_27785220_+SINEAluAluJr
CAediting_875957chr12_27785269_+SINEAluAluJr
CAediting_875958chr12_27785270_+SINEAluAluJr
CAediting_875959chr12_27785274_+SINEAluAluJr
CAediting_875960chr12_27785299_+SINEAluAluJr
CAediting_875961chr12_27785303_+SINEAluAluJr
CAediting_875962chr12_27785414_+SINEAluAluJr
CAediting_875963chr12_27786786_+SINEAluAluY
CAediting_875964chr12_27787308_+SINEAluAluSx1
CAediting_875965chr12_27787309_+SINEAluAluSx1
CAediting_875966chr12_27787374_+SINEAluAluSx1
CAediting_875967chr12_27787380_+SINEAluAluSx1
CAediting_875968chr12_27787384_+SINEAluAluSx1
CAediting_875969chr12_27787444_+SINEAluAluSx1
CAediting_875970chr12_27787445_+SINEAluAluSx1
CAediting_875971chr12_27790816_+SINEAluAluJr
CAediting_875972chr12_27790817_+SINEAluAluJr
CAediting_875973chr12_27790934_+SINEAluAluJr
CAediting_875974chr12_27790940_+SINEAluAluJr
CAediting_875975chr12_27790946_+SINEAluAluJr
CAediting_875976chr12_27790981_+SINEAluAluJr
CAediting_875977chr12_27791006_+SINEAluAluJr
CAediting_875978chr12_27792527_+SINEAluAluSx
CAediting_875979chr12_27792543_+SINEAluAluSx
CAediting_875980chr12_27792549_+SINEAluAluSx
CAediting_875981chr12_27792563_+SINEAluAluSx
CAediting_875982chr12_27792588_+SINEAluAluSx
CAediting_875983chr12_27792604_+SINEAluAluSx
CAediting_875984chr12_27792623_+SINEAluAluSx
CAediting_875985chr12_27792624_+SINEAluAluSx
CAediting_875986chr12_27792641_+SINEAluAluSx
CAediting_875987chr12_27792649_+SINEAluAluSx
CAediting_875988chr12_27792653_+SINEAluAluSx
CAediting_875989chr12_27792663_+SINEAluAluSx
CAediting_875990chr12_27792665_+SINEAluAluSx
CAediting_875991chr12_27792675_+SINEAluAluSx
CAediting_875992chr12_27792703_+SINEAluAluSx
CAediting_875993chr12_27792706_+SINEAluAluSx
CAediting_875994chr12_27792708_+SINEAluAluSx
CAediting_875995chr12_27792720_+SINEAluAluSx
CAediting_875996chr12_27792723_+SINEAluAluSx
CAediting_875997chr12_27792757_+SINEAluAluSx
CAediting_875998chr12_27792762_+SINEAluAluSx
CAediting_875999chr12_27792784_+SINEAluAluSx
CAediting_876000chr12_27792940_+SINEAluAluJo
CAediting_876001chr12_27792941_+SINEAluAluJo
CAediting_876002chr12_27792984_+SINEAluAluJo
CAediting_876003chr12_27792989_+SINEAluAluJo
CAediting_876004chr12_27793012_+SINEAluAluJo
CAediting_876005chr12_27793024_+SINEAluAluJo
CAediting_876006chr12_27793032_+SINEAluAluJo
CAediting_876007chr12_27793136_+SINEAluFLAM_C
CAediting_876008chr12_27793147_+SINEAluFLAM_C
CAediting_876009chr12_27793152_+SINEAluFLAM_C
CAediting_876010chr12_27793153_+SINEAluFLAM_C
CAediting_876011chr12_27793157_+SINEAluFLAM_C
CAediting_876012chr12_27793160_+SINEAluFLAM_C
CAediting_876013chr12_27793168_+SINEAluFLAM_C
CAediting_876014chr12_27793178_+SINEAluFLAM_C
CAediting_876015chr12_27793200_+SINEAluFLAM_C
CAediting_876016chr12_27793205_+SINEAluFLAM_C
CAediting_876017chr12_27793210_+SINEAluFLAM_C
CAediting_876018chr12_27793220_+SINEAluFLAM_C
CAediting_876019chr12_27793221_+SINEAluFLAM_C
CAediting_876020chr12_27793225_+SINEAluFLAM_C
CAediting_876021chr12_27793229_+SINEAluFLAM_C
CAediting_876022chr12_27793242_+SINEAluFLAM_C
CAediting_876023chr12_27793243_+SINEAluFLAM_C
CAediting_876024chr12_27793244_+SINEAluFLAM_C
CAediting_876025chr12_27793245_+SINEAluFLAM_C
CAediting_876026chr12_27793246_+SINEAluFLAM_C
CAediting_876027chr12_27793253_+SINEAluFLAM_C
CAediting_876028chr12_27793254_+SINEAluFLAM_C
CAediting_876029chr12_27793255_+SINEAluFLAM_C
CAediting_876031chr12_27793274_+SINEAluAluJo
CAediting_876032chr12_27793284_+SINEAluAluJo
CAediting_876033chr12_27793290_+SINEAluAluJo
CAediting_876034chr12_27793301_+SINEAluAluJo
CAediting_876035chr12_27793307_+SINEAluAluJo
CAediting_876036chr12_27793311_+SINEAluAluJo
CAediting_876037chr12_27793320_+SINEAluAluJo
CAediting_876038chr12_27793325_+SINEAluAluJo
CAediting_876039chr12_27793338_+SINEAluAluJo
CAediting_876040chr12_27793339_+SINEAluAluJo
CAediting_876041chr12_27793343_+SINEAluAluJo
CAediting_876042chr12_27793361_+SINEAluAluJo
CAediting_876043chr12_27793362_+SINEAluAluJo
CAediting_876044chr12_27793375_+SINEAluAluJo
CAediting_876045chr12_27793377_+SINEAluAluJo
CAediting_876046chr12_27793382_+SINEAluAluJo
CAediting_876047chr12_27793384_+SINEAluAluJo
CAediting_876048chr12_27793385_+SINEAluAluJo
CAediting_876049chr12_27793387_+SINEAluAluJo
CAediting_876050chr12_27793388_+SINEAluAluJo
CAediting_876051chr12_27793389_+SINEAluAluJo
CAediting_876052chr12_27793391_+SINEAluAluJo
CAediting_876053chr12_27793392_+SINEAluAluJo
CAediting_876054chr12_27793393_+SINEAluAluJo
CAediting_876055chr12_27793396_+SINEAluAluJo
CAediting_876056chr12_27793412_+SINEAluAluJo
CAediting_876057chr12_27793422_+SINEAluAluJo
CAediting_876058chr12_27793428_+SINEAluAluJo
CAediting_876059chr12_27793432_+SINEAluAluJo
CAediting_876060chr12_27793439_+SINEAluAluJo
CAediting_876061chr12_27793445_+SINEAluAluJo
CAediting_876062chr12_27793449_+SINEAluAluJo
CAediting_876063chr12_27793452_+SINEAluAluJo
CAediting_876064chr12_27793467_+SINEAluAluJo
CAediting_876065chr12_27793476_+SINEAluAluJo
CAediting_876066chr12_27793483_+SINEAluAluJo
CAediting_876067chr12_27793487_+SINEAluAluJo
CAediting_876068chr12_27793491_+SINEAluAluJo
CAediting_876069chr12_27793494_+SINEAluAluJo
CAediting_876070chr12_27793512_+SINEAluAluJo
CAediting_876071chr12_27793526_+SINEAluAluJo
CAediting_876072chr12_27793563_+SINEAluAluJo
CAediting_876073chr12_27793565_+SINEAluAluJo
CAediting_876074chr12_27793566_+SINEAluAluJo
CAediting_876075chr12_27794467_+LTRERVL-MaLRMLT1C
CAediting_876076chr12_27794547_+SINEAluFRAM
CAediting_876077chr12_27794553_+SINEAluFRAM
CAediting_876078chr12_27794561_+SINEAluFRAM
CAediting_876079chr12_27794571_+SINEAluFRAM
CAediting_876080chr12_27794577_+SINEAluFRAM
CAediting_876081chr12_27794591_+SINEAluFRAM
CAediting_876082chr12_27794603_+SINEAluFRAM
CAediting_876083chr12_27794617_+SINEAluFRAM
CAediting_876084chr12_27794630_+SINEAluFRAM
CAediting_876085chr12_27796649_+SINEAluAluJb
CAediting_876086chr12_27796656_+SINEAluAluJb
CAediting_876087chr12_27796659_+SINEAluAluJb
CAediting_876088chr12_27796664_+SINEAluAluJb
CAediting_876089chr12_27796672_+SINEAluAluJb
CAediting_876090chr12_27796684_+SINEAluAluJb
CAediting_876091chr12_27796688_+SINEAluAluJb
CAediting_876092chr12_27796702_+SINEAluAluJb
CAediting_876093chr12_27796731_+SINEAluAluJb
CAediting_876094chr12_27796732_+SINEAluAluJb
CAediting_876095chr12_27796745_+SINEAluAluJb
CAediting_876096chr12_27796762_+SINEAluAluJb
CAediting_876097chr12_27796765_+SINEAluAluJb
CAediting_876098chr12_27796775_+SINEAluAluJb
CAediting_876099chr12_27796777_+SINEAluAluJb
CAediting_876100chr12_27796785_+SINEAluAluJb
CAediting_876101chr12_27796788_+SINEAluAluJb
CAediting_876102chr12_27796802_+SINEAluAluJb
CAediting_876103chr12_27796818_+SINEAluAluJb
CAediting_876104chr12_27796824_+SINEAluAluJb
CAediting_876105chr12_27796834_+SINEAluAluJb
CAediting_876106chr12_27796837_+SINEAluAluJb
CAediting_876107chr12_27796839_+SINEAluAluJb
CAediting_876108chr12_27796846_+SINEAluAluJb
CAediting_876109chr12_27796859_+SINEAluAluJb
CAediting_876110chr12_27796900_+SINEAluAluJb
CAediting_876111chr12_27796912_+SINEAluAluJb
CAediting_876112chr12_27800721_+SINEAluAluSz6
CAediting_876113chr12_27800730_+SINEAluAluSz6
CAediting_876114chr12_27800731_+SINEAluAluSz6

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RNA A-to-I editing events in the alternative splicing sites for KLHL42

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000087448.8.KLHL42.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000087448.8.KLHL42.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for KLHL42

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for KLHL42

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for KLHL42

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_876114chr12_27800731_+ENSG00000087448.8ENST00000381271hsa-miR-130a-5p27800724278007318mer-1a2780071027800731148.00-7.41
CAediting_876114chr12_27800731_+ENSG00000087448.8ENST00000381271hsa-miR-432027800729278007357mer-m82780071927800736148.00-14.47
CAediting_876114chr12_27800731_+ENSG00000087448.8ENST00000381271hsa-miR-4753-3p27800725278007328mer-1a2780071127800732148.00-10.51
CAediting_876114chr12_27800731_+ENSG00000087448.8ENST00000381271hsa-miR-6809-3p27800726278007327mer-m82780071327800733156.00-7.20

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_876114chr12_27800731_+ENSG00000087448.8ENST00000381271hsa-miR-129027800729278007357mer-m82780071827800736141-6.61

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000087448.8ENST00000539176hsa-miR-624-3p27798022277980287mer-m82779800927798029143-13.77
CAediting_688080chr9_63819626_+ENSG00000087448.8ENST00000539176hsa-miR-4477b27798053277980597mer-m82779803727798060157-18.74
CAediting_393chr1_1167164_+ENSG00000087448.8ENST00000381271hsa-miR-200b-3p27799173277991797mer-m82779915827799180147-12.96
CAediting_393chr1_1167164_+ENSG00000087448.8ENST00000381271hsa-miR-200b-3p27801460278014667mer-m82780144627801467159-13.26
CAediting_393chr1_1167164_+ENSG00000087448.8ENST00000381271hsa-miR-200b-3p27801621278016277mer-m82780160527801628158-19.89
CAediting_393chr1_1167164_+ENSG00000087448.8ENST00000381271hsa-miR-200b-3p27802976278029827mer-m82780296427802983147-9.71
CAediting_688080chr9_63819626_+ENSG00000087448.8ENST00000381271hsa-miR-4477b27799366277993738mer-1a2779934727799373159-19.6
CAediting_1229413chr17_67471544_+ENSG00000087448.8ENST00000539176hsa-miR-548aa27798125277981317mer-m82779810627798132156-13.54
CAediting_396018chr5_1062918_-ENSG00000087448.8ENST00000539176hsa-miR-463527797937277979437mer-m82779792527797944158-23.06
CAediting_396018chr5_1062918_-ENSG00000087448.8ENST00000539176hsa-miR-463527798054277980607mer-m82779804327798061147-15.33
CAediting_1229414chr17_67471546_+ENSG00000087448.8ENST00000381271hsa-miR-548aa27801443278014497mer-m82780142327801450147-14.38
CAediting_1229414chr17_67471546_+ENSG00000087448.8ENST00000381271hsa-miR-548aa27801649278016568mer-1a2780163427801656154-14.93
CAediting_1229415chr17_67471547_+ENSG00000087448.8ENST00000381271hsa-miR-548aa27800994278010007mer-m82780097727801001142-7.4
CAediting_442554chr5_154685830_+ENSG00000087448.8ENST00000381271hsa-miR-130327798401277984088mer-1a2779838927798408160-25.95
CAediting_1524209chrX_134546392_-ENSG00000087448.8ENST00000539176hsa-miR-503-5p27797316277973216mer2779729827797322142-17.6

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_442554chr5_154685830_+ENSG00000087448.8ENST00000381271hsa-miR-130327800797278008048mer-1a2780078327800804141-14.99
CAediting_846604chr11_93733708_-ENSG00000087448.8ENST00000381271hsa-miR-1304-3p27799318277993247mer-m82779930427799325145-14.07
CAediting_846604chr11_93733708_-ENSG00000087448.8ENST00000381271hsa-miR-1304-3p27801795278018017mer-m82780178327801802143-13.83
CAediting_393chr1_1167164_+ENSG00000087448.8ENST00000381271hsa-miR-200b-3p27800576278005838mer-1a2780056327800583149-12.71
CAediting_604450chr7_133034877_-ENSG00000087448.8ENST00000381271hsa-miR-365427799727277997337mer-m82779971827799734144-13.77
CAediting_1351755chr19_40282625_-ENSG00000087448.8ENST00000381271hsa-miR-64127803011278030177mer-m82780299527803018140-9.32

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for KLHL42

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for KLHL42

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
STADCAediting_875984chr12_27792623_+....0.02960844650887910.254778201779867
BRCACAediting_876032chr12_27793284_+0.009650958355273330.337158708323229....
STADCAediting_876032chr12_27793284_+0.0004618033670714850.287159633781504....
STADCAediting_876057chr12_27793422_+0.04468683184133010.163632259654619....
STADCAediting_876065chr12_27793476_+..0.005007819485487620.387138286765295..

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Relation with cancer stages for KLHL42

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
ESCAclinical_stageCAediting_876057chr12_27793422_+0.0467400426016977-0.324648749829672
ESCApathologic_stageCAediting_876057chr12_27793422_+0.03103263553928020.213701005376921
STADpathologic_stageCAediting_876055chr12_27793396_+0.04416209277189180.222866587567787

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Relation with survival for KLHL42

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for KLHL42

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for KLHL42

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource