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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: RALGAPA2 (CAeditome ID:57186)

Gene summary for RALGAPA2

check button Gene summary
Gene informationGene symbol

RALGAPA2

Gene ID

57186

Gene nameRal GTPase activating protein catalytic subunit alpha 2
SynonymsAS250|C20orf74|bA287B20.1|dJ1049G11|dJ1049G11.4|p220
Cytomap

20p11.23

Type of geneprotein-coding
Descriptionral GTPase-activating protein subunit alpha-2250 kDa substrate of AktRal GTPase activating protein catalytic alpha subunit 2Ral GTPase activating protein, alpha subunit 2 (catalytic)RapGAPalpha2akt substrate AS250ral GTPase-activating protein alpha
Modification date20210518
UniProtAcc

Q2PPJ7

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
RALGAPA2

GO:0005737

Ral GTPase-activating protein subunit alpha-2

16490346

RALGAPA2

GO:0005829

Ral GTPase-activating protein subunit alpha-2

0000052

RALGAPA2

GO:0005886

Ral GTPase-activating protein subunit alpha-2

0000052


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RNA A-to-I events for RALGAPA2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000188559.12
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1409506(20390867, -), CAediting_1409507(20394576, -), CAediting_1409508(20422402, -), CAediting_1409509(20434819, -), CAediting_1409510(20434823, -), CAediting_1409511(20473619, -), CAediting_1409512(20473620, -), CAediting_1409513(20486102, -), CAediting_1409514(20486104, -), CAediting_1409515(20539935, -), CAediting_1409516(20539937, -), CAediting_1409517(20539960, -), CAediting_1409518(20539977, -), CAediting_1409519(20539993, -), CAediting_1409520(20539994, -), CAediting_1409521(20540039, -), CAediting_1409522(20540043, -), CAediting_1409523(20540045, -), CAediting_1409524(20540048, -), CAediting_1409525(20540063, -), CAediting_1409526(20540146, -), CAediting_1409527(20540151, -), CAediting_1409528(20540157, -), CAediting_1409529(20540160, -), CAediting_1409530(20540162, -), CAediting_1409531(20540163, -), CAediting_1409532(20540190, -), CAediting_1409533(20540199, -), CAediting_1409534(20540203, -), CAediting_1409535(20543209, -), CAediting_1409536(20543246, -), CAediting_1409537(20543273, -), CAediting_1409538(20543304, -), CAediting_1409539(20543331, -), CAediting_1409540(20544165, -), CAediting_1409541(20544232, -), CAediting_1409542(20544589, -), CAediting_1409543(20544634, -), CAediting_1409544(20544662, -), CAediting_1409545(20545302, -), CAediting_1409546(20545312, -), CAediting_1409547(20545313, -), CAediting_1409548(20545317, -), CAediting_1409549(20545996, -), CAediting_1409550(20546073, -), CAediting_1409551(20553301, -), CAediting_1409552(20554736, -), CAediting_1409553(20558169, -), CAediting_1409554(20592980, -), CAediting_1409555(20593042, -), CAediting_1409556(20593112, -), CAediting_1409557(20593113, -), CAediting_1409558(20593125, -), CAediting_1409559(20593133, -), CAediting_1409560(20593176, -), CAediting_1409561(20594791, -), CAediting_1409562(20594801, -), CAediting_1409563(20594840, -), CAediting_1409564(20594850, -), CAediting_1409565(20594861, -), CAediting_1409566(20594867, -), CAediting_1409567(20594910, -), CAediting_1409568(20594915, -), CAediting_1409569(20594916, -), CAediting_1409570(20594917, -), CAediting_1409571(20594925, -), CAediting_1409572(20594946, -), CAediting_1409573(20594970, -), CAediting_1409574(20594971, -), CAediting_1409575(20594986, -), CAediting_1409576(20594992, -), CAediting_1409577(20594993, -), CAediting_1409578(20595008, -), CAediting_1409579(20595832, -), CAediting_1409580(20595848, -), CAediting_1409581(20633123, -), CAediting_1409582(20633124, -), CAediting_1409583(20633128, -), CAediting_1409584(20633133, -), CAediting_1409585(20633136, -), CAediting_1409586(20633137, -), CAediting_1409587(20633143, -), CAediting_1409588(20633255, -), CAediting_1409589(20633272, -), CAediting_1409590(20633580, -), CAediting_1409591(20645207, -), CAediting_1409592(20645214, -), CAediting_1409593(20645239, -), CAediting_1409594(20645252, -), CAediting_1409595(20645253, -), CAediting_1409596(20645288, -), CAediting_1409597(20646127, -), CAediting_1409598(20646128, -), CAediting_1409599(20660009, -), CAediting_1409600(20660136, -), CAediting_1409601(20660171, -), CAediting_1409602(20660176, -), CAediting_1409603(20661227, -), CAediting_1409604(20661235, -), CAediting_1409605(20661307, -), CAediting_1409606(20661353, -), CAediting_1409607(20661361, -), CAediting_1409608(20661379, -), CAediting_1409609(20661439, -), CAediting_1409610(20673985, -), CAediting_1409611(20674074, -), CAediting_1409612(20677765, -), CAediting_1409613(20677776, -), CAediting_1409614(20677918, -), CAediting_1409615(20693887, -), CAediting_1409616(20698522, -), CAediting_1409617(20701569, -), CAediting_1409618(20701574, -), CAediting_1409619(20702916, -), CAediting_1409620(20703000, -), CAediting_1409621(20703080, -), CAediting_1409622(20703091, -), CAediting_1409623(20703110, -), CAediting_1409624(20705285, -), CAediting_1409625(20705322, -), CAediting_1409626(20705407, -), CAediting_1409627(20705807, -), CAediting_1409628(20709455, -),

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RNA editing positional annotations for RALGAPA2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1409506chr20_20390867_-UTR3
CAediting_1409507chr20_20394576_-intronic
CAediting_1409508chr20_20422402_-intronic
CAediting_1409509chr20_20434819_-intronic
CAediting_1409510chr20_20434823_-intronic
CAediting_1409511chr20_20473619_-intronic
CAediting_1409512chr20_20473620_-intronic
CAediting_1409513chr20_20486102_-intronic
CAediting_1409514chr20_20486104_-intronic
CAediting_1409515chr20_20539935_-intronic
CAediting_1409516chr20_20539937_-intronic
CAediting_1409517chr20_20539960_-intronic
CAediting_1409518chr20_20539977_-intronic
CAediting_1409519chr20_20539993_-intronic
CAediting_1409520chr20_20539994_-intronic
CAediting_1409521chr20_20540039_-intronic
CAediting_1409522chr20_20540043_-intronic
CAediting_1409523chr20_20540045_-intronic
CAediting_1409524chr20_20540048_-intronic
CAediting_1409525chr20_20540063_-intronic
CAediting_1409526chr20_20540146_-intronic
CAediting_1409527chr20_20540151_-intronic
CAediting_1409528chr20_20540157_-intronic
CAediting_1409529chr20_20540160_-intronic
CAediting_1409530chr20_20540162_-intronic
CAediting_1409531chr20_20540163_-intronic
CAediting_1409532chr20_20540190_-intronic
CAediting_1409533chr20_20540199_-intronic
CAediting_1409534chr20_20540203_-intronic
CAediting_1409535chr20_20543209_-intronic
CAediting_1409536chr20_20543246_-intronic
CAediting_1409537chr20_20543273_-intronic
CAediting_1409538chr20_20543304_-intronic
CAediting_1409539chr20_20543331_-intronic
CAediting_1409540chr20_20544165_-intronic
CAediting_1409541chr20_20544232_-intronic
CAediting_1409542chr20_20544589_-intronic
CAediting_1409543chr20_20544634_-intronic
CAediting_1409544chr20_20544662_-intronic
CAediting_1409545chr20_20545302_-intronic
CAediting_1409546chr20_20545312_-intronic
CAediting_1409547chr20_20545313_-intronic
CAediting_1409548chr20_20545317_-intronic
CAediting_1409549chr20_20545996_-intronic
CAediting_1409550chr20_20546073_-intronic
CAediting_1409551chr20_20553301_-intronic
CAediting_1409552chr20_20554736_-intronic
CAediting_1409553chr20_20558169_-intronic
CAediting_1409554chr20_20592980_-intronic
CAediting_1409555chr20_20593042_-intronic
CAediting_1409556chr20_20593112_-intronic
CAediting_1409557chr20_20593113_-intronic
CAediting_1409558chr20_20593125_-intronic
CAediting_1409559chr20_20593133_-intronic
CAediting_1409560chr20_20593176_-intronic
CAediting_1409561chr20_20594791_-intronic
CAediting_1409562chr20_20594801_-intronic
CAediting_1409563chr20_20594840_-intronic
CAediting_1409564chr20_20594850_-intronic
CAediting_1409565chr20_20594861_-intronic
CAediting_1409566chr20_20594867_-intronic
CAediting_1409567chr20_20594910_-intronic
CAediting_1409568chr20_20594915_-intronic
CAediting_1409569chr20_20594916_-intronic
CAediting_1409570chr20_20594917_-intronic
CAediting_1409571chr20_20594925_-intronic
CAediting_1409572chr20_20594946_-intronic
CAediting_1409573chr20_20594970_-intronic
CAediting_1409574chr20_20594971_-intronic
CAediting_1409575chr20_20594986_-intronic
CAediting_1409576chr20_20594992_-intronic
CAediting_1409577chr20_20594993_-intronic
CAediting_1409578chr20_20595008_-intronic
CAediting_1409579chr20_20595832_-intronic
CAediting_1409580chr20_20595848_-intronic
CAediting_1409581chr20_20633123_-intronic
CAediting_1409582chr20_20633124_-intronic
CAediting_1409583chr20_20633128_-intronic
CAediting_1409584chr20_20633133_-intronic
CAediting_1409585chr20_20633136_-intronic
CAediting_1409586chr20_20633137_-intronic
CAediting_1409587chr20_20633143_-intronic
CAediting_1409588chr20_20633255_-intronic
CAediting_1409589chr20_20633272_-intronic
CAediting_1409590chr20_20633580_-intronic
CAediting_1409591chr20_20645207_-intronic
CAediting_1409592chr20_20645214_-intronic
CAediting_1409593chr20_20645239_-intronic
CAediting_1409594chr20_20645252_-intronic
CAediting_1409595chr20_20645253_-intronic
CAediting_1409596chr20_20645288_-intronic
CAediting_1409597chr20_20646127_-intronic
CAediting_1409598chr20_20646128_-intronic
CAediting_1409599chr20_20660009_-intronic
CAediting_1409600chr20_20660136_-intronic
CAediting_1409601chr20_20660171_-intronic
CAediting_1409602chr20_20660176_-intronic
CAediting_1409603chr20_20661227_-intronic
CAediting_1409604chr20_20661235_-intronic
CAediting_1409605chr20_20661307_-intronic
CAediting_1409606chr20_20661353_-intronic
CAediting_1409607chr20_20661361_-intronic
CAediting_1409608chr20_20661379_-intronic
CAediting_1409609chr20_20661439_-intronic
CAediting_1409610chr20_20673985_-intronic
CAediting_1409611chr20_20674074_-intronic
CAediting_1409612chr20_20677765_-intronic
CAediting_1409613chr20_20677776_-intronic
CAediting_1409614chr20_20677918_-intronic
CAediting_1409615chr20_20693887_-intronic
CAediting_1409616chr20_20698522_-intronic
CAediting_1409617chr20_20701569_-intronic
CAediting_1409618chr20_20701574_-intronic
CAediting_1409619chr20_20702916_-intronic
CAediting_1409620chr20_20703000_-intronic
CAediting_1409621chr20_20703080_-intronic
CAediting_1409622chr20_20703091_-intronic
CAediting_1409623chr20_20703110_-intronic
CAediting_1409624chr20_20705285_-intronic
CAediting_1409625chr20_20705322_-intronic
CAediting_1409626chr20_20705407_-intronic
CAediting_1409627chr20_20705807_-intronic
CAediting_1409628chr20_20709455_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1409507chr20_20394576_-SINEAluAluJb
CAediting_1409508chr20_20422402_-SINEAluAluJr
CAediting_1409509chr20_20434819_-SINEAluAluJb
CAediting_1409510chr20_20434823_-SINEAluAluJb
CAediting_1409511chr20_20473619_-SINEAluAluJr
CAediting_1409512chr20_20473620_-SINEAluAluJr
CAediting_1409513chr20_20486102_-SINEAluAluJb
CAediting_1409514chr20_20486104_-SINEAluAluJb
CAediting_1409515chr20_20539935_-LINEL1L1MA9
CAediting_1409516chr20_20539937_-LINEL1L1MA9
CAediting_1409517chr20_20539960_-LINEL1L1MA9
CAediting_1409518chr20_20539977_-LINEL1L1MA9
CAediting_1409519chr20_20539993_-LINEL1L1MA9
CAediting_1409520chr20_20539994_-LINEL1L1MA9
CAediting_1409521chr20_20540039_-LINEL1L1MA9
CAediting_1409522chr20_20540043_-LINEL1L1MA9
CAediting_1409523chr20_20540045_-LINEL1L1MA9
CAediting_1409524chr20_20540048_-LINEL1L1MA9
CAediting_1409525chr20_20540063_-LINEL1L1MA9
CAediting_1409526chr20_20540146_-LINEL1L1MA9
CAediting_1409527chr20_20540151_-LINEL1L1MA9
CAediting_1409528chr20_20540157_-LINEL1L1MA9
CAediting_1409529chr20_20540160_-LINEL1L1MA9
CAediting_1409530chr20_20540162_-LINEL1L1MA9
CAediting_1409531chr20_20540163_-LINEL1L1MA9
CAediting_1409532chr20_20540190_-LINEL1L1MA9
CAediting_1409533chr20_20540199_-LINEL1L1MA9
CAediting_1409534chr20_20540203_-LINEL1L1MA9
CAediting_1409535chr20_20543209_-SINEAluAluSc8
CAediting_1409536chr20_20543246_-SINEAluAluSc8
CAediting_1409537chr20_20543273_-SINEAluAluSc8
CAediting_1409538chr20_20543304_-SINEAluAluSc8
CAediting_1409539chr20_20543331_-SINEAluAluSc8
CAediting_1409540chr20_20544165_-SINEAluAluY
CAediting_1409541chr20_20544232_-SINEAluAluY
CAediting_1409542chr20_20544589_-LINEL1L1PA7
CAediting_1409543chr20_20544634_-LINEL1L1PA7
CAediting_1409544chr20_20544662_-LINEL1L1PA7
CAediting_1409545chr20_20545302_-SINEAluFLAM_A
CAediting_1409546chr20_20545312_-SINEAluFLAM_A
CAediting_1409547chr20_20545313_-SINEAluFLAM_A
CAediting_1409548chr20_20545317_-SINEAluFLAM_A
CAediting_1409549chr20_20545996_-SINEAluAluJr4
CAediting_1409550chr20_20546073_-SINEAluAluJr4
CAediting_1409551chr20_20553301_-SINEAluAluJo
CAediting_1409552chr20_20554736_-SINEAluAluSz
CAediting_1409553chr20_20558169_-SINEAluAluSq
CAediting_1409554chr20_20592980_-SINEAluAluJb
CAediting_1409555chr20_20593042_-SINEAluAluJb
CAediting_1409556chr20_20593112_-SINEAluAluJb
CAediting_1409557chr20_20593113_-SINEAluAluJb
CAediting_1409558chr20_20593125_-SINEAluAluJb
CAediting_1409559chr20_20593133_-SINEAluAluJb
CAediting_1409560chr20_20593176_-SINEAluAluJb
CAediting_1409561chr20_20594791_-SINEAluAluY
CAediting_1409562chr20_20594801_-SINEAluAluY
CAediting_1409563chr20_20594840_-SINEAluAluY
CAediting_1409564chr20_20594850_-SINEAluAluY
CAediting_1409565chr20_20594861_-SINEAluAluY
CAediting_1409566chr20_20594867_-SINEAluAluY
CAediting_1409567chr20_20594910_-SINEAluAluY
CAediting_1409568chr20_20594915_-SINEAluAluY
CAediting_1409569chr20_20594916_-SINEAluAluY
CAediting_1409570chr20_20594917_-SINEAluAluY
CAediting_1409571chr20_20594925_-SINEAluAluY
CAediting_1409572chr20_20594946_-SINEAluAluY
CAediting_1409573chr20_20594970_-SINEAluAluY
CAediting_1409574chr20_20594971_-SINEAluAluY
CAediting_1409575chr20_20594986_-SINEAluAluY
CAediting_1409576chr20_20594992_-SINEAluAluY
CAediting_1409577chr20_20594993_-SINEAluAluY
CAediting_1409578chr20_20595008_-SINEAluAluY
CAediting_1409579chr20_20595832_-SINEAluAluSg
CAediting_1409580chr20_20595848_-SINEAluAluSg
CAediting_1409581chr20_20633123_-SINEAluAluSx1
CAediting_1409582chr20_20633124_-SINEAluAluSx1
CAediting_1409583chr20_20633128_-SINEAluAluSx1
CAediting_1409584chr20_20633133_-SINEAluAluSx1
CAediting_1409585chr20_20633136_-SINEAluAluSx1
CAediting_1409586chr20_20633137_-SINEAluAluSx1
CAediting_1409587chr20_20633143_-SINEAluAluSx1
CAediting_1409588chr20_20633255_-SINEAluAluSx1
CAediting_1409589chr20_20633272_-SINEAluAluSx1
CAediting_1409590chr20_20633580_-SINEAluAluY
CAediting_1409591chr20_20645207_-SINEAluAluSx
CAediting_1409592chr20_20645214_-SINEAluAluSx
CAediting_1409593chr20_20645239_-SINEAluAluSx
CAediting_1409594chr20_20645252_-SINEAluAluSx
CAediting_1409595chr20_20645253_-SINEAluAluSx
CAediting_1409596chr20_20645288_-SINEAluAluSx
CAediting_1409597chr20_20646127_-SINEAluAluSx3
CAediting_1409598chr20_20646128_-SINEAluAluSx3
CAediting_1409599chr20_20660009_-SINEAluAluSz
CAediting_1409600chr20_20660136_-SINEAluAluSz
CAediting_1409601chr20_20660171_-SINEAluAluSz
CAediting_1409602chr20_20660176_-SINEAluAluSz
CAediting_1409603chr20_20661227_-SINEAluAluSz6
CAediting_1409604chr20_20661235_-SINEAluAluSz6
CAediting_1409605chr20_20661307_-SINEAluAluSz6
CAediting_1409606chr20_20661353_-SINEAluAluSz6
CAediting_1409607chr20_20661361_-SINEAluAluSz6
CAediting_1409608chr20_20661379_-SINEAluAluSz6
CAediting_1409609chr20_20661439_-SINEAluAluSz6
CAediting_1409610chr20_20673985_-SINEAluAluJo
CAediting_1409611chr20_20674074_-SINEAluAluJo
CAediting_1409612chr20_20677765_-SINEAluAluY
CAediting_1409613chr20_20677776_-SINEAluAluY
CAediting_1409614chr20_20677918_-SINEAluAluY
CAediting_1409615chr20_20693887_-SINEAluAluJb
CAediting_1409616chr20_20698522_-SINEAluAluSx1
CAediting_1409617chr20_20701569_-SINEAluAluSx3
CAediting_1409618chr20_20701574_-SINEAluAluSx3
CAediting_1409619chr20_20702916_-SINEAluAluSz6
CAediting_1409620chr20_20703000_-SINEAluAluSz6
CAediting_1409621chr20_20703080_-SINEAluAluSz6
CAediting_1409622chr20_20703091_-SINEAluAluSz6
CAediting_1409623chr20_20703110_-SINEAluAluSz6
CAediting_1409624chr20_20705285_-SINEAluAluJb
CAediting_1409625chr20_20705322_-SINEAluAluJb
CAediting_1409626chr20_20705407_-SINEAluAluJb
CAediting_1409627chr20_20705807_-SINEAluAluSg
CAediting_1409628chr20_20709455_-SINEAluAluJb

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RNA A-to-I editing events in the alternative splicing sites for RALGAPA2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000188559.12.RALGAPA2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000188559.12.RALGAPA2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RALGAPA2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for RALGAPA2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for RALGAPA2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1409506chr20_20390867_-ENSG00000188559.12ENST00000430436hsa-miR-3692-5p20390866203908727mer-m82039086520390891144-17.4
CAediting_1409506chr20_20390867_-ENSG00000188559.12ENST00000430436hsa-miR-548av-3p20390863203908697mer-m82039086220390881142-8.13

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000188559.12ENST00000430436hsa-miR-605-3p20391780203917867mer-m82039177920391800149-19.04
CAediting_748296chr10_51299626_+ENSG00000188559.12ENST00000430436hsa-miR-605-3p20391780203917867mer-m82039177220391793140-17.89
CAediting_748296chr10_51299626_+ENSG00000188559.12ENST00000430436hsa-miR-605-3p20391773203917797mer-m82039177220391793140-17.89
CAediting_688081chr9_63819627_+ENSG00000188559.12ENST00000430436hsa-miR-4477b20390538203905436mer2039053720390558143-18.6
CAediting_748296chr10_51299626_+ENSG00000188559.12ENST00000620717hsa-miR-605-3p20393116203931238mer-1a2039311620393137156-19.93
CAediting_688080chr9_63819626_+ENSG00000188559.12ENST00000427175hsa-miR-4477b20472160204721678mer-1a2047216020472185151-10.94
CAediting_1054808chr15_66496985_-ENSG00000188559.12ENST00000430436hsa-miR-451220392050203920578mer-1a2039205020392073145-19.07
CAediting_1054808chr15_66496985_-ENSG00000188559.12ENST00000430436hsa-miR-451220390609203906157mer-1a2039060920390630140-14.35
CAediting_1229415chr17_67471547_+ENSG00000188559.12ENST00000430436hsa-miR-548aa20391061203910688mer-1a2039106120391085159-16.71
CAediting_1229415chr17_67471547_+ENSG00000188559.12ENST00000430436hsa-miR-548aa20392693203926997mer-m82039269220392715147-10.74
CAediting_1351755chr19_40282625_-ENSG00000188559.12ENST00000430436hsa-miR-64120393057203930637mer-1a2039305720393082144-20.73
CAediting_86358chr1_109598906_+ENSG00000188559.12ENST00000430436hsa-miR-197-5p20391998203920047mer-m82039199720392019150-20.75
CAediting_228905chr2_188297554_+ENSG00000188559.12ENST00000430436hsa-miR-561-3p20391019203910246mer2039101820391042143-11.73
CAediting_524911chr7_5495852_-ENSG00000188559.12ENST00000430436hsa-miR-589-3p20392923203929297mer-m82039292220392947169-30.18
CAediting_1351755chr19_40282625_-ENSG00000188559.12ENST00000620717hsa-miR-64120393057203930637mer-1a2039305720393082144-20.73
CAediting_524911chr7_5495852_-ENSG00000188559.12ENST00000620717hsa-miR-589-3p20392923203929297mer-m82039292220392947169-30.18

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_580943chr7_100356700_+ENSG00000188559.12ENST00000430436hsa-miR-6840-3p20391825203918328mer-1a2039182520391846146-22.04
CAediting_688080chr9_63819626_+ENSG00000188559.12ENST00000427175hsa-miR-4477b20472132204721398mer-1a2047213220472153145-10.14
CAediting_688081chr9_63819627_+ENSG00000188559.12ENST00000427175hsa-miR-4477b20472132204721398mer-1a2047213220472153145-10.14
CAediting_228905chr2_188297554_+ENSG00000188559.12ENST00000427175hsa-miR-561-3p20471183204711897mer-m82047118220471207148-9.64

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for RALGAPA2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for RALGAPA2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_1409506chr20_20390867_-5.78136085505034e-110.371684046548187....
LIHCCAediting_1409506chr20_20390867_-9.23274079855855e-060.371366408743757....
LUADCAediting_1409506chr20_20390867_-1.80510842542344e-130.616171843040629....
LUSCCAediting_1409506chr20_20390867_-0.01419861926287970.326033884866322....
STADCAediting_1409506chr20_20390867_-0.001245331602554720.431779858567764....

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Relation with cancer stages for RALGAPA2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_1409506chr20_20390867_-0.0001554768709627980.222204869189617
LIHCpathologic_stageCAediting_1409506chr20_20390867_-0.006470734031767270.242338710705853

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Relation with survival for RALGAPA2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
LUSCCAediting_1409506chr20_20390867_-0.02113801009331560.02659041.52961e-05

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RelatedDrugs for RALGAPA2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for RALGAPA2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource