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Editing gene: PSMC6 (CAeditome ID:5706)

Gene summary for PSMC6

Gene summary

Gene information	Gene symbol	PSMC6
	Gene ID	5706
	Gene name	proteasome 26S subunit, ATPase 6
	Synonyms	RPT5\|SUG2\|p42
	Cytomap	14q22.1
	Type of gene	protein-coding
	Description	26S proteasome regulatory subunit 10B26S proteasome AAA-ATPase subunit RPT4proteasome (prosome, macropain) 26S subunit, ATPase, 6proteasome subunit p42
	Modification date	20210518
	UniProtAcc	P62333
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
PSMC6	GO:0005634	26S proteasome regulatory subunit 10B	10419517
PSMC6	GO:0000502	26S proteasome regulatory subunit 10B	17323924
PSMC6	GO:0000502	26S proteasome regulatory subunit 10B	9464850

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RNA A-to-I events for PSMC6

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000100519.10

RNA A-to-I editing events in Cancer.

CAediting_992084(52710274, +), CAediting_992085(52710348, +), CAediting_992086(52710349, +), CAediting_992087(52712709, +), CAediting_992088(52712716, +), CAediting_992089(52712748, +), CAediting_992090(52713049, +), CAediting_992091(52713055, +), CAediting_992092(52713179, +), CAediting_992093(52714072, +), CAediting_992094(52714115, +), CAediting_992095(52714153, +), CAediting_992096(52714170, +), CAediting_992097(52714275, +), CAediting_992098(52714287, +), CAediting_992099(52714300, +), CAediting_992100(52714316, +), CAediting_992101(52714600, +), CAediting_992102(52714606, +), CAediting_992103(52714607, +), CAediting_992104(52714612, +), CAediting_992105(52714633, +), CAediting_992106(52714637, +), CAediting_992107(52714642, +), CAediting_992108(52714645, +), CAediting_992109(52714705, +), CAediting_992110(52714706, +), CAediting_992111(52714710, +), CAediting_992112(52714713, +), CAediting_992113(52714715, +), CAediting_992114(52714716, +), CAediting_992115(52714719, +), CAediting_992116(52714723, +), CAediting_992117(52714746, +), CAediting_992118(52714755, +), CAediting_992119(52714763, +), CAediting_992120(52714772, +), CAediting_992121(52714775, +), CAediting_992122(52714786, +), CAediting_992123(52714787, +), CAediting_992124(52714798, +), CAediting_992125(52714807, +), CAediting_992126(52714811, +), CAediting_992127(52714816, +), CAediting_992128(52714818, +), CAediting_992129(52714848, +), CAediting_992130(52715729, +), CAediting_992131(52715746, +), CAediting_992132(52715878, +), CAediting_992133(52716492, +), CAediting_992134(52716498, +), CAediting_992135(52716505, +), CAediting_992136(52716577, +), CAediting_992137(52716619, +), CAediting_992138(52716632, +), CAediting_992139(52716633, +), CAediting_992140(52717596, +), CAediting_992141(52717762, +), CAediting_992142(52717763, +), CAediting_992143(52717785, +), CAediting_992144(52717786, +), CAediting_992145(52717809, +), CAediting_992146(52717817, +), CAediting_992147(52717834, +), CAediting_992148(52717836, +), CAediting_992149(52717873, +), CAediting_992150(52717874, +), CAediting_992151(52717881, +), CAediting_992152(52717908, +), CAediting_992153(52717938, +), CAediting_992154(52717947, +), CAediting_992155(52718000, +), CAediting_992156(52718666, +), CAediting_992157(52718675, +), CAediting_992158(52719947, +), CAediting_992159(52719969, +), CAediting_992160(52719970, +), CAediting_992161(52719975, +), CAediting_992162(52720076, +), CAediting_992163(52720102, +), CAediting_992164(52720103, +), CAediting_992165(52720135, +), CAediting_992166(52720172, +), CAediting_992167(52720277, +), CAediting_992168(52720288, +), CAediting_992169(52720293, +), CAediting_992170(52720296, +), CAediting_992171(52720301, +), CAediting_992172(52720313, +), CAediting_992173(52720323, +), CAediting_992174(52721527, +), CAediting_992175(52721546, +), CAediting_992176(52721552, +), CAediting_992177(52721562, +), CAediting_992178(52721568, +), CAediting_992179(52721572, +), CAediting_992180(52721591, +), CAediting_992181(52721611, +), CAediting_992182(52721615, +), CAediting_992183(52721621, +), CAediting_992184(52721672, +), CAediting_992185(52721674, +), CAediting_992186(52721675, +), CAediting_992187(52721785, +), CAediting_992188(52721791, +), CAediting_992189(52721809, +), CAediting_992190(52721816, +), CAediting_992191(52721821, +), CAediting_992192(52721830, +), CAediting_992193(52721835, +), CAediting_992194(52721859, +), CAediting_992195(52721860, +), CAediting_992196(52721865, +), CAediting_992197(52721866, +), CAediting_992198(52721867, +), CAediting_992199(52721878, +), CAediting_992200(52721895, +), CAediting_992201(52721993, +), CAediting_992202(52721994, +), CAediting_992203(52721997, +), CAediting_992204(52722006, +), CAediting_992205(52726742, +),

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RNA editing positional annotations for PSMC6 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_992084	chr14_52710274_+	ncRNA_exonic
CAediting_992085	chr14_52710348_+	ncRNA_intronic
CAediting_992086	chr14_52710349_+	ncRNA_intronic
CAediting_992087	chr14_52712709_+	ncRNA_intronic
CAediting_992088	chr14_52712716_+	ncRNA_intronic
CAediting_992089	chr14_52712748_+	ncRNA_intronic
CAediting_992090	chr14_52713049_+	ncRNA_intronic
CAediting_992091	chr14_52713055_+	ncRNA_intronic
CAediting_992092	chr14_52713179_+	ncRNA_intronic
CAediting_992093	chr14_52714072_+	ncRNA_intronic
CAediting_992094	chr14_52714115_+	ncRNA_intronic
CAediting_992095	chr14_52714153_+	ncRNA_intronic
CAediting_992096	chr14_52714170_+	ncRNA_intronic
CAediting_992097	chr14_52714275_+	ncRNA_intronic
CAediting_992098	chr14_52714287_+	ncRNA_intronic
CAediting_992099	chr14_52714300_+	ncRNA_intronic
CAediting_992100	chr14_52714316_+	ncRNA_intronic
CAediting_992101	chr14_52714600_+	ncRNA_intronic
CAediting_992102	chr14_52714606_+	ncRNA_intronic
CAediting_992103	chr14_52714607_+	ncRNA_intronic
CAediting_992104	chr14_52714612_+	ncRNA_intronic
CAediting_992105	chr14_52714633_+	ncRNA_intronic
CAediting_992106	chr14_52714637_+	ncRNA_intronic
CAediting_992107	chr14_52714642_+	ncRNA_intronic
CAediting_992108	chr14_52714645_+	ncRNA_intronic
CAediting_992109	chr14_52714705_+	ncRNA_intronic
CAediting_992110	chr14_52714706_+	ncRNA_intronic
CAediting_992111	chr14_52714710_+	ncRNA_intronic
CAediting_992112	chr14_52714713_+	ncRNA_intronic
CAediting_992113	chr14_52714715_+	ncRNA_intronic
CAediting_992114	chr14_52714716_+	ncRNA_intronic
CAediting_992115	chr14_52714719_+	ncRNA_intronic
CAediting_992116	chr14_52714723_+	ncRNA_intronic
CAediting_992117	chr14_52714746_+	ncRNA_intronic
CAediting_992118	chr14_52714755_+	ncRNA_intronic
CAediting_992119	chr14_52714763_+	ncRNA_intronic
CAediting_992120	chr14_52714772_+	ncRNA_intronic
CAediting_992121	chr14_52714775_+	ncRNA_intronic
CAediting_992122	chr14_52714786_+	ncRNA_intronic
CAediting_992123	chr14_52714787_+	ncRNA_intronic
CAediting_992124	chr14_52714798_+	ncRNA_intronic
CAediting_992125	chr14_52714807_+	ncRNA_intronic
CAediting_992126	chr14_52714811_+	ncRNA_intronic
CAediting_992127	chr14_52714816_+	ncRNA_intronic
CAediting_992128	chr14_52714818_+	ncRNA_intronic
CAediting_992129	chr14_52714848_+	ncRNA_intronic
CAediting_992130	chr14_52715729_+	ncRNA_intronic
CAediting_992131	chr14_52715746_+	ncRNA_intronic
CAediting_992132	chr14_52715878_+	ncRNA_intronic
CAediting_992133	chr14_52716492_+	ncRNA_intronic
CAediting_992134	chr14_52716498_+	ncRNA_intronic
CAediting_992135	chr14_52716505_+	ncRNA_intronic
CAediting_992136	chr14_52716577_+	ncRNA_intronic
CAediting_992137	chr14_52716619_+	ncRNA_intronic
CAediting_992138	chr14_52716632_+	ncRNA_intronic
CAediting_992139	chr14_52716633_+	ncRNA_intronic
CAediting_992140	chr14_52717596_+	ncRNA_intronic
CAediting_992141	chr14_52717762_+	ncRNA_intronic
CAediting_992142	chr14_52717763_+	ncRNA_intronic
CAediting_992143	chr14_52717785_+	ncRNA_intronic
CAediting_992144	chr14_52717786_+	ncRNA_intronic
CAediting_992145	chr14_52717809_+	ncRNA_intronic
CAediting_992146	chr14_52717817_+	ncRNA_intronic
CAediting_992147	chr14_52717834_+	ncRNA_intronic
CAediting_992148	chr14_52717836_+	ncRNA_intronic
CAediting_992149	chr14_52717873_+	ncRNA_intronic
CAediting_992150	chr14_52717874_+	ncRNA_intronic
CAediting_992151	chr14_52717881_+	ncRNA_intronic
CAediting_992152	chr14_52717908_+	ncRNA_intronic
CAediting_992153	chr14_52717938_+	ncRNA_intronic
CAediting_992154	chr14_52717947_+	ncRNA_intronic
CAediting_992155	chr14_52718000_+	ncRNA_intronic
CAediting_992156	chr14_52718666_+	ncRNA_exonic
CAediting_992157	chr14_52718675_+	ncRNA_exonic
CAediting_992158	chr14_52719947_+	ncRNA_intronic
CAediting_992159	chr14_52719969_+	ncRNA_intronic
CAediting_992160	chr14_52719970_+	ncRNA_intronic
CAediting_992161	chr14_52719975_+	ncRNA_intronic
CAediting_992162	chr14_52720076_+	ncRNA_intronic
CAediting_992163	chr14_52720102_+	ncRNA_intronic
CAediting_992164	chr14_52720103_+	ncRNA_intronic
CAediting_992165	chr14_52720135_+	ncRNA_intronic
CAediting_992166	chr14_52720172_+	ncRNA_intronic
CAediting_992167	chr14_52720277_+	ncRNA_intronic
CAediting_992168	chr14_52720288_+	ncRNA_intronic
CAediting_992169	chr14_52720293_+	ncRNA_intronic
CAediting_992170	chr14_52720296_+	ncRNA_intronic
CAediting_992171	chr14_52720301_+	ncRNA_intronic
CAediting_992172	chr14_52720313_+	ncRNA_intronic
CAediting_992173	chr14_52720323_+	ncRNA_intronic
CAediting_992174	chr14_52721527_+	ncRNA_exonic
CAediting_992175	chr14_52721546_+	ncRNA_exonic
CAediting_992176	chr14_52721552_+	ncRNA_exonic
CAediting_992177	chr14_52721562_+	ncRNA_exonic
CAediting_992178	chr14_52721568_+	ncRNA_exonic
CAediting_992179	chr14_52721572_+	ncRNA_exonic
CAediting_992180	chr14_52721591_+	ncRNA_exonic
CAediting_992181	chr14_52721611_+	ncRNA_exonic
CAediting_992182	chr14_52721615_+	ncRNA_exonic
CAediting_992183	chr14_52721621_+	ncRNA_exonic
CAediting_992184	chr14_52721672_+	ncRNA_exonic
CAediting_992185	chr14_52721674_+	ncRNA_exonic
CAediting_992186	chr14_52721675_+	ncRNA_exonic
CAediting_992187	chr14_52721785_+	ncRNA_exonic
CAediting_992188	chr14_52721791_+	ncRNA_exonic
CAediting_992189	chr14_52721809_+	ncRNA_exonic
CAediting_992190	chr14_52721816_+	ncRNA_exonic
CAediting_992191	chr14_52721821_+	ncRNA_exonic
CAediting_992192	chr14_52721830_+	ncRNA_exonic
CAediting_992193	chr14_52721835_+	ncRNA_exonic
CAediting_992194	chr14_52721859_+	ncRNA_exonic
CAediting_992195	chr14_52721860_+	ncRNA_exonic
CAediting_992196	chr14_52721865_+	ncRNA_exonic
CAediting_992197	chr14_52721866_+	ncRNA_exonic
CAediting_992198	chr14_52721867_+	ncRNA_exonic
CAediting_992199	chr14_52721878_+	ncRNA_exonic
CAediting_992200	chr14_52721895_+	ncRNA_exonic
CAediting_992201	chr14_52721993_+	ncRNA_exonic
CAediting_992202	chr14_52721994_+	ncRNA_exonic
CAediting_992203	chr14_52721997_+	ncRNA_exonic
CAediting_992204	chr14_52722006_+	ncRNA_exonic
CAediting_992205	chr14_52726742_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_992084	chr14_52710274_+	SINE	Alu	AluSx3
CAediting_992085	chr14_52710348_+	SINE	Alu	AluSx3
CAediting_992086	chr14_52710349_+	SINE	Alu	AluSx3
CAediting_992087	chr14_52712709_+	SINE	Alu	AluJb
CAediting_992088	chr14_52712716_+	SINE	Alu	AluJb
CAediting_992089	chr14_52712748_+	SINE	Alu	AluJb
CAediting_992090	chr14_52713049_+	SINE	Alu	AluSx
CAediting_992091	chr14_52713055_+	SINE	Alu	AluSx
CAediting_992092	chr14_52713179_+	SINE	Alu	AluSx
CAediting_992093	chr14_52714072_+	SINE	Alu	AluJb
CAediting_992094	chr14_52714115_+	SINE	Alu	AluJb
CAediting_992095	chr14_52714153_+	SINE	Alu	AluJb
CAediting_992096	chr14_52714170_+	SINE	Alu	AluJb
CAediting_992097	chr14_52714275_+	SINE	Alu	AluJb
CAediting_992098	chr14_52714287_+	SINE	Alu	AluJb
CAediting_992099	chr14_52714300_+	SINE	Alu	AluJb
CAediting_992100	chr14_52714316_+	SINE	Alu	AluJb
CAediting_992101	chr14_52714600_+	SINE	Alu	AluSx
CAediting_992102	chr14_52714606_+	SINE	Alu	AluSx
CAediting_992103	chr14_52714607_+	SINE	Alu	AluSx
CAediting_992104	chr14_52714612_+	SINE	Alu	AluSx
CAediting_992105	chr14_52714633_+	SINE	Alu	AluSx
CAediting_992106	chr14_52714637_+	SINE	Alu	AluSx
CAediting_992107	chr14_52714642_+	SINE	Alu	AluSx
CAediting_992108	chr14_52714645_+	SINE	Alu	AluSx
CAediting_992109	chr14_52714705_+	SINE	Alu	AluSx
CAediting_992110	chr14_52714706_+	SINE	Alu	AluSx
CAediting_992111	chr14_52714710_+	SINE	Alu	AluSx
CAediting_992112	chr14_52714713_+	SINE	Alu	AluSx
CAediting_992113	chr14_52714715_+	SINE	Alu	AluSx
CAediting_992114	chr14_52714716_+	SINE	Alu	AluSx
CAediting_992115	chr14_52714719_+	SINE	Alu	AluSx
CAediting_992116	chr14_52714723_+	SINE	Alu	AluSx
CAediting_992117	chr14_52714746_+	SINE	Alu	AluSx
CAediting_992118	chr14_52714755_+	SINE	Alu	AluSx
CAediting_992119	chr14_52714763_+	SINE	Alu	AluSx
CAediting_992120	chr14_52714772_+	SINE	Alu	AluSx
CAediting_992121	chr14_52714775_+	SINE	Alu	AluSx
CAediting_992122	chr14_52714786_+	SINE	Alu	AluSx
CAediting_992123	chr14_52714787_+	SINE	Alu	AluSx
CAediting_992124	chr14_52714798_+	SINE	Alu	AluSx
CAediting_992125	chr14_52714807_+	SINE	Alu	AluSx
CAediting_992126	chr14_52714811_+	SINE	Alu	AluSx
CAediting_992127	chr14_52714816_+	SINE	Alu	AluSx
CAediting_992128	chr14_52714818_+	SINE	Alu	AluSx
CAediting_992129	chr14_52714848_+	SINE	Alu	AluSx
CAediting_992130	chr14_52715729_+	SINE	Alu	AluJb
CAediting_992131	chr14_52715746_+	SINE	Alu	AluJb
CAediting_992132	chr14_52715878_+	SINE	Alu	AluJb
CAediting_992133	chr14_52716492_+	SINE	Alu	AluSp
CAediting_992134	chr14_52716498_+	SINE	Alu	AluSp
CAediting_992135	chr14_52716505_+	SINE	Alu	AluSp
CAediting_992136	chr14_52716577_+	SINE	Alu	AluSp
CAediting_992137	chr14_52716619_+	SINE	Alu	AluSp
CAediting_992138	chr14_52716632_+	SINE	Alu	AluSp
CAediting_992139	chr14_52716633_+	SINE	Alu	AluSp
CAediting_992140	chr14_52717596_+	SINE	Alu	AluSc8
CAediting_992141	chr14_52717762_+	SINE	Alu	AluJb
CAediting_992142	chr14_52717763_+	SINE	Alu	AluJb
CAediting_992143	chr14_52717785_+	SINE	Alu	AluJb
CAediting_992144	chr14_52717786_+	SINE	Alu	AluJb
CAediting_992145	chr14_52717809_+	SINE	Alu	AluJb
CAediting_992146	chr14_52717817_+	SINE	Alu	AluJb
CAediting_992147	chr14_52717834_+	SINE	Alu	AluJb
CAediting_992148	chr14_52717836_+	SINE	Alu	AluJb
CAediting_992149	chr14_52717873_+	SINE	Alu	AluJb
CAediting_992150	chr14_52717874_+	SINE	Alu	AluJb
CAediting_992151	chr14_52717881_+	SINE	Alu	AluJb
CAediting_992152	chr14_52717908_+	SINE	Alu	AluJb
CAediting_992153	chr14_52717938_+	SINE	Alu	AluJb
CAediting_992154	chr14_52717947_+	SINE	Alu	AluJb
CAediting_992155	chr14_52718000_+	SINE	Alu	AluJb
CAediting_992156	chr14_52718666_+	SINE	Alu	AluSc5
CAediting_992157	chr14_52718675_+	SINE	Alu	AluSc5
CAediting_992158	chr14_52719947_+	SINE	Alu	AluSg
CAediting_992159	chr14_52719969_+	SINE	Alu	AluSg
CAediting_992160	chr14_52719970_+	SINE	Alu	AluSg
CAediting_992161	chr14_52719975_+	SINE	Alu	AluSg
CAediting_992162	chr14_52720076_+	SINE	Alu	AluSg
CAediting_992163	chr14_52720102_+	SINE	Alu	AluSg
CAediting_992164	chr14_52720103_+	SINE	Alu	AluSg
CAediting_992165	chr14_52720135_+	SINE	Alu	AluSg
CAediting_992166	chr14_52720172_+	SINE	Alu	AluSg
CAediting_992167	chr14_52720277_+	SINE	Alu	AluJr
CAediting_992168	chr14_52720288_+	SINE	Alu	AluJr
CAediting_992169	chr14_52720293_+	SINE	Alu	AluJr
CAediting_992170	chr14_52720296_+	SINE	Alu	AluJr
CAediting_992171	chr14_52720301_+	SINE	Alu	AluJr
CAediting_992172	chr14_52720313_+	SINE	Alu	AluJr
CAediting_992173	chr14_52720323_+	SINE	Alu	AluJr
CAediting_992174	chr14_52721527_+	SINE	Alu	AluJr4
CAediting_992175	chr14_52721546_+	SINE	Alu	AluJr4
CAediting_992176	chr14_52721552_+	SINE	Alu	AluJr4
CAediting_992177	chr14_52721562_+	SINE	Alu	AluJr4
CAediting_992178	chr14_52721568_+	SINE	Alu	AluJr4
CAediting_992179	chr14_52721572_+	SINE	Alu	AluJr4
CAediting_992180	chr14_52721591_+	SINE	Alu	AluJr4
CAediting_992181	chr14_52721611_+	SINE	Alu	AluJr4
CAediting_992182	chr14_52721615_+	SINE	Alu	AluJr4
CAediting_992183	chr14_52721621_+	SINE	Alu	AluJr4
CAediting_992184	chr14_52721672_+	SINE	Alu	AluJr4
CAediting_992185	chr14_52721674_+	SINE	Alu	AluJr4
CAediting_992186	chr14_52721675_+	SINE	Alu	AluJr4
CAediting_992187	chr14_52721785_+	SINE	Alu	AluJb
CAediting_992188	chr14_52721791_+	SINE	Alu	AluJb
CAediting_992189	chr14_52721809_+	SINE	Alu	AluJb
CAediting_992190	chr14_52721816_+	SINE	Alu	AluJb
CAediting_992191	chr14_52721821_+	SINE	Alu	AluJb
CAediting_992192	chr14_52721830_+	SINE	Alu	AluJb
CAediting_992193	chr14_52721835_+	SINE	Alu	AluJb
CAediting_992194	chr14_52721859_+	SINE	Alu	AluJb
CAediting_992195	chr14_52721860_+	SINE	Alu	AluJb
CAediting_992196	chr14_52721865_+	SINE	Alu	AluJb
CAediting_992197	chr14_52721866_+	SINE	Alu	AluJb
CAediting_992198	chr14_52721867_+	SINE	Alu	AluJb
CAediting_992199	chr14_52721878_+	SINE	Alu	AluJb
CAediting_992200	chr14_52721895_+	SINE	Alu	AluJb
CAediting_992201	chr14_52721993_+	SINE	Alu	AluJb
CAediting_992202	chr14_52721994_+	SINE	Alu	AluJb
CAediting_992203	chr14_52721997_+	SINE	Alu	AluJb
CAediting_992204	chr14_52722006_+	SINE	Alu	AluJb
CAediting_992205	chr14_52726742_+	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for PSMC6

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000100519.10.PSMC6.

Correlation between RNA A-to-I editing and PSI for ENSG00000100519.10.PSMC6.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PSMC6

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PSMC6

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for PSMC6

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_604450	chr7_133034877_-	ENSG00000100519.10	ENST00000553899	hsa-miR-3654	52707493	52707499	7mer-m8	52707482	52707500	140	-19.08
CAediting_1351755	chr19_40282625_-	ENSG00000100519.10	ENST00000553899	hsa-miR-641	52711446	52711453	8mer-1a	52711431	52711453	154	-13.04
CAediting_1351755	chr19_40282625_-	ENSG00000100519.10	ENST00000554044	hsa-miR-641	52708658	52708664	7mer-m8	52708642	52708665	153	-13.01
CAediting_1351755	chr19_40282625_-	ENSG00000100519.10	ENST00000554044	hsa-miR-641	52711446	52711453	8mer-1a	52711431	52711453	154	-13.04
CAediting_604450	chr7_133034877_-	ENSG00000100519.10	ENST00000553798	hsa-miR-3654	52707493	52707499	7mer-m8	52707482	52707500	140	-19.08
CAediting_1351755	chr19_40282625_-	ENSG00000100519.10	ENST00000553798	hsa-miR-641	52708658	52708664	7mer-m8	52708642	52708665	153	-13.01
CAediting_604450	chr7_133034877_-	ENSG00000100519.10	ENST00000557517	hsa-miR-3654	52707493	52707499	7mer-m8	52707482	52707500	140	-19.08
CAediting_1351755	chr19_40282625_-	ENSG00000100519.10	ENST00000557517	hsa-miR-641	52708658	52708664	7mer-m8	52708642	52708665	153	-13.01

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PSMC6

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for PSMC6

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for PSMC6

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for PSMC6

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for PSMC6

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for PSMC6

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene