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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CHPT1 (CAeditome ID:56994)

Gene summary for CHPT1

check button Gene summary
Gene informationGene symbol

CHPT1

Gene ID

56994

Gene namecholine phosphotransferase 1
SynonymsCPT|CPT1
Cytomap

12q23.2

Type of geneprotein-coding
Descriptioncholinephosphotransferase 1AAPT1-like proteincholinephosphotransferase 1 alphadiacylglycerol cholinephosphotransferase 1hCPT1phosphatidylcholine synthesizing enzyme
Modification date20210518
UniProtAcc

Q8WUD6

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CHPT1

GO:0004142

Cholinephosphotransferase 1

10893425

CHPT1

GO:0006656

Cholinephosphotransferase 1

10893425

CHPT1

GO:0006663

Cholinephosphotransferase 1

10893425


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RNA A-to-I events for CHPT1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000111666.9
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_918086(101702464, +), CAediting_918087(101702465, +), CAediting_918088(101702855, +), CAediting_918089(101705867, +), CAediting_918090(101706163, +), CAediting_918091(101706164, +), CAediting_918092(101706203, +), CAediting_918093(101706229, +), CAediting_918094(101706239, +), CAediting_918095(101706243, +), CAediting_918096(101708639, +), CAediting_918097(101708697, +), CAediting_918098(101708736, +), CAediting_918099(101708744, +), CAediting_918100(101708754, +), CAediting_918101(101708762, +), CAediting_918102(101708763, +), CAediting_918103(101708797, +), CAediting_918104(101708806, +), CAediting_918105(101708832, +), CAediting_918106(101709118, +), CAediting_918107(101709130, +), CAediting_918108(101709138, +), CAediting_918109(101709140, +), CAediting_918110(101709141, +), CAediting_918111(101709181, +), CAediting_918112(101709189, +), CAediting_918113(101709214, +), CAediting_918114(101709238, +), CAediting_918115(101709244, +), CAediting_918116(101709245, +), CAediting_918117(101709246, +), CAediting_918118(101709247, +), CAediting_918119(101709250, +), CAediting_918120(101709276, +), CAediting_918121(101709301, +), CAediting_918122(101709308, +), CAediting_918123(101709316, +), CAediting_918124(101709320, +), CAediting_918125(101709372, +), CAediting_918126(101710130, +), CAediting_918127(101712194, +), CAediting_918128(101712283, +), CAediting_918129(101712289, +), CAediting_918130(101718447, +), CAediting_918131(101718585, +), CAediting_918132(101718640, +), CAediting_918133(101718955, +), CAediting_918134(101718961, +), CAediting_918135(101718978, +), CAediting_918136(101719030, +), CAediting_918137(101721043, +), CAediting_918138(101721210, +), CAediting_918139(101721836, +), CAediting_918140(101721922, +), CAediting_918141(101722603, +), CAediting_918142(101727120, +), CAediting_918143(101727972, +), CAediting_918144(101727976, +), CAediting_918145(101727988, +), CAediting_918146(101727994, +), CAediting_918147(101727995, +), CAediting_918148(101728036, +), CAediting_918149(101728040, +), CAediting_918150(101728064, +), CAediting_918151(101728072, +), CAediting_918152(101728074, +), CAediting_918153(101728085, +), CAediting_918154(101728094, +), CAediting_918155(101728120, +), CAediting_918156(101728129, +), CAediting_918157(101728135, +), CAediting_918158(101728147, +), CAediting_918159(101728156, +), CAediting_918160(101728160, +), CAediting_918161(101728170, +), CAediting_918162(101728171, +), CAediting_918163(101728178, +), CAediting_918164(101728202, +), CAediting_918165(101728205, +), CAediting_918166(101728234, +), CAediting_918167(101728245, +), CAediting_918168(101739721, +), CAediting_918169(101739727, +), CAediting_918170(101739888, +), CAediting_918171(101739902, +), CAediting_918172(101739903, +), CAediting_918173(101739910, +), CAediting_918174(101739914, +), CAediting_918175(101740781, +), CAediting_918176(101740782, +), CAediting_918177(101740927, +), CAediting_918178(101740928, +), CAediting_918179(101740953, +), CAediting_918180(101740966, +), CAediting_918181(101740972, +), CAediting_918182(101741232, +), CAediting_918183(101741233, +), CAediting_918184(101741234, +), CAediting_918185(101741251, +), CAediting_918186(101741258, +), CAediting_918187(101741265, +), CAediting_918188(101741266, +), CAediting_918189(101741267, +), CAediting_918190(101741277, +), CAediting_918191(101741290, +), CAediting_918192(101741291, +), CAediting_918193(101741292, +), CAediting_918194(101741293, +), CAediting_918195(101741294, +), CAediting_918196(101741295, +), CAediting_918197(101741302, +), CAediting_918198(101741303, +), CAediting_918199(101741304, +), CAediting_918200(101741310, +), CAediting_918201(101741313, +), CAediting_918202(101741318, +), CAediting_918203(101741325, +), CAediting_918204(101741329, +), CAediting_918205(101741330, +), CAediting_918206(101741332, +), CAediting_918207(101741333, +), CAediting_918208(101741343, +), CAediting_918209(101741344, +), CAediting_918210(101741357, +), CAediting_918211(101741360, +), CAediting_918212(101741366, +), CAediting_918213(101741383, +), CAediting_918214(101741430, +), CAediting_918215(101741433, +), CAediting_918216(101741437, +), CAediting_918217(101741439, +), CAediting_918218(101741452, +), CAediting_918219(101741454, +), CAediting_918220(101741465, +), CAediting_918221(101741471, +), CAediting_918222(101741479, +), CAediting_918223(101741487, +), CAediting_918224(101741982, +), CAediting_918225(101742008, +), CAediting_918226(101742125, +), CAediting_918227(101742132, +), CAediting_918228(101742135, +), CAediting_918229(101742136, +), CAediting_918230(101742139, +), CAediting_918231(101742141, +), CAediting_918232(101742151, +), CAediting_918233(101742156, +), CAediting_918234(101742166, +), CAediting_918235(101742167, +), CAediting_918236(101742168, +), CAediting_918237(101742169, +), CAediting_918238(101742174, +), CAediting_918239(101742176, +), CAediting_918240(101742179, +), CAediting_918241(101742190, +), CAediting_918242(101742191, +), CAediting_918243(101742196, +), CAediting_918244(101742213, +), CAediting_918245(101742218, +), CAediting_918246(101742219, +), CAediting_918247(101742221, +), CAediting_918248(101742222, +), CAediting_918249(101742225, +), CAediting_918250(101742233, +), CAediting_918251(101742234, +), CAediting_918252(101742236, +), CAediting_918253(101742238, +), CAediting_918254(101742241, +), CAediting_918255(101742242, +), CAediting_918256(101742243, +), CAediting_918257(101742247, +), CAediting_918258(101742265, +), CAediting_918259(101742266, +), CAediting_918260(101742272, +), CAediting_918261(101742273, +), CAediting_918262(101742276, +), CAediting_918263(101742279, +), CAediting_918264(101742281, +), CAediting_918265(101742292, +), CAediting_918266(101742303, +), CAediting_918267(101742325, +), CAediting_918268(101742333, +), CAediting_918269(101742343, +), CAediting_918270(101742344, +), CAediting_918271(101742356, +), CAediting_918272(101742362, +), CAediting_918273(101742363, +), CAediting_918274(101742364, +), CAediting_918275(101742368, +), CAediting_918276(101742370, +), CAediting_918277(101742371, +), CAediting_918278(101743713, +), CAediting_918279(101743717, +), CAediting_918280(101743719, +), CAediting_918281(101743727, +), CAediting_918282(101743729, +), CAediting_918283(101743735, +), CAediting_918284(101743736, +), CAediting_918285(101743752, +), CAediting_918286(101743759, +), CAediting_918287(101743762, +), CAediting_918288(101743781, +), CAediting_918289(101743784, +), CAediting_918290(101743790, +), CAediting_918291(101743809, +), CAediting_918292(101743810, +), CAediting_918293(101743823, +), CAediting_918294(101743840, +), CAediting_918295(101743843, +), CAediting_918296(101743847, +), CAediting_918297(101743863, +), CAediting_918298(101743883, +), CAediting_918299(101743887, +), CAediting_918300(101743892, +), CAediting_918301(101743897, +), CAediting_918302(101743910, +), CAediting_918303(101743931, +), CAediting_918304(101743940, +), CAediting_918305(101743945, +), CAediting_918306(101743950, +), CAediting_918307(101743970, +), CAediting_918308(101743973, +), CAediting_918309(101743992, +),

Top

RNA editing positional annotations for CHPT1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_918086chr12_101702464_+ncRNA_intronic
CAediting_918087chr12_101702465_+ncRNA_intronic
CAediting_918088chr12_101702855_+ncRNA_intronic
CAediting_918089chr12_101705867_+ncRNA_intronic
CAediting_918090chr12_101706163_+ncRNA_intronic
CAediting_918091chr12_101706164_+ncRNA_intronic
CAediting_918092chr12_101706203_+ncRNA_intronic
CAediting_918093chr12_101706229_+ncRNA_intronic
CAediting_918094chr12_101706239_+ncRNA_intronic
CAediting_918095chr12_101706243_+ncRNA_intronic
CAediting_918096chr12_101708639_+ncRNA_intronic
CAediting_918097chr12_101708697_+ncRNA_intronic
CAediting_918098chr12_101708736_+ncRNA_intronic
CAediting_918099chr12_101708744_+ncRNA_intronic
CAediting_918100chr12_101708754_+ncRNA_intronic
CAediting_918101chr12_101708762_+ncRNA_intronic
CAediting_918102chr12_101708763_+ncRNA_intronic
CAediting_918103chr12_101708797_+ncRNA_intronic
CAediting_918104chr12_101708806_+ncRNA_intronic
CAediting_918105chr12_101708832_+ncRNA_intronic
CAediting_918106chr12_101709118_+ncRNA_intronic
CAediting_918107chr12_101709130_+ncRNA_intronic
CAediting_918108chr12_101709138_+ncRNA_intronic
CAediting_918109chr12_101709140_+ncRNA_intronic
CAediting_918110chr12_101709141_+ncRNA_intronic
CAediting_918111chr12_101709181_+ncRNA_intronic
CAediting_918112chr12_101709189_+ncRNA_intronic
CAediting_918113chr12_101709214_+ncRNA_intronic
CAediting_918114chr12_101709238_+ncRNA_intronic
CAediting_918115chr12_101709244_+ncRNA_intronic
CAediting_918116chr12_101709245_+ncRNA_intronic
CAediting_918117chr12_101709246_+ncRNA_intronic
CAediting_918118chr12_101709247_+ncRNA_intronic
CAediting_918119chr12_101709250_+ncRNA_intronic
CAediting_918120chr12_101709276_+ncRNA_intronic
CAediting_918121chr12_101709301_+ncRNA_intronic
CAediting_918122chr12_101709308_+ncRNA_intronic
CAediting_918123chr12_101709316_+ncRNA_intronic
CAediting_918124chr12_101709320_+ncRNA_intronic
CAediting_918125chr12_101709372_+ncRNA_intronic
CAediting_918126chr12_101710130_+ncRNA_intronic
CAediting_918127chr12_101712194_+ncRNA_intronic
CAediting_918128chr12_101712283_+ncRNA_intronic
CAediting_918129chr12_101712289_+ncRNA_intronic
CAediting_918130chr12_101718447_+ncRNA_intronic
CAediting_918131chr12_101718585_+ncRNA_intronic
CAediting_918132chr12_101718640_+ncRNA_intronic
CAediting_918133chr12_101718955_+ncRNA_intronic
CAediting_918134chr12_101718961_+ncRNA_intronic
CAediting_918135chr12_101718978_+ncRNA_intronic
CAediting_918136chr12_101719030_+ncRNA_intronic
CAediting_918137chr12_101721043_+intronic
CAediting_918138chr12_101721210_+intronic
CAediting_918139chr12_101721836_+intronic
CAediting_918140chr12_101721922_+intronic
CAediting_918141chr12_101722603_+intronic
CAediting_918142chr12_101727120_+UTR3
CAediting_918143chr12_101727972_+UTR3
CAediting_918144chr12_101727976_+UTR3
CAediting_918145chr12_101727988_+UTR3
CAediting_918146chr12_101727994_+UTR3
CAediting_918147chr12_101727995_+UTR3
CAediting_918148chr12_101728036_+UTR3
CAediting_918149chr12_101728040_+UTR3
CAediting_918150chr12_101728064_+UTR3
CAediting_918151chr12_101728072_+UTR3
CAediting_918152chr12_101728074_+UTR3
CAediting_918153chr12_101728085_+UTR3
CAediting_918154chr12_101728094_+UTR3
CAediting_918155chr12_101728120_+UTR3
CAediting_918156chr12_101728129_+UTR3
CAediting_918157chr12_101728135_+UTR3
CAediting_918158chr12_101728147_+UTR3
CAediting_918159chr12_101728156_+UTR3
CAediting_918160chr12_101728160_+UTR3
CAediting_918161chr12_101728170_+UTR3
CAediting_918162chr12_101728171_+UTR3
CAediting_918163chr12_101728178_+UTR3
CAediting_918164chr12_101728202_+UTR3
CAediting_918165chr12_101728205_+UTR3
CAediting_918166chr12_101728234_+UTR3
CAediting_918167chr12_101728245_+UTR3
CAediting_918168chr12_101739721_+ncRNA_exonic
CAediting_918169chr12_101739727_+ncRNA_exonic
CAediting_918170chr12_101739888_+ncRNA_intronic
CAediting_918171chr12_101739902_+ncRNA_intronic
CAediting_918172chr12_101739903_+ncRNA_intronic
CAediting_918173chr12_101739910_+ncRNA_intronic
CAediting_918174chr12_101739914_+ncRNA_intronic
CAediting_918175chr12_101740781_+ncRNA_intronic
CAediting_918176chr12_101740782_+ncRNA_intronic
CAediting_918177chr12_101740927_+ncRNA_intronic
CAediting_918178chr12_101740928_+ncRNA_intronic
CAediting_918179chr12_101740953_+ncRNA_intronic
CAediting_918180chr12_101740966_+ncRNA_intronic
CAediting_918181chr12_101740972_+ncRNA_intronic
CAediting_918182chr12_101741232_+ncRNA_intronic
CAediting_918183chr12_101741233_+ncRNA_intronic
CAediting_918184chr12_101741234_+ncRNA_intronic
CAediting_918185chr12_101741251_+ncRNA_intronic
CAediting_918186chr12_101741258_+ncRNA_intronic
CAediting_918187chr12_101741265_+ncRNA_intronic
CAediting_918188chr12_101741266_+ncRNA_intronic
CAediting_918189chr12_101741267_+ncRNA_intronic
CAediting_918190chr12_101741277_+ncRNA_intronic
CAediting_918191chr12_101741290_+ncRNA_intronic
CAediting_918192chr12_101741291_+ncRNA_intronic
CAediting_918193chr12_101741292_+ncRNA_intronic
CAediting_918194chr12_101741293_+ncRNA_intronic
CAediting_918195chr12_101741294_+ncRNA_intronic
CAediting_918196chr12_101741295_+ncRNA_intronic
CAediting_918197chr12_101741302_+ncRNA_intronic
CAediting_918198chr12_101741303_+ncRNA_intronic
CAediting_918199chr12_101741304_+ncRNA_intronic
CAediting_918200chr12_101741310_+ncRNA_intronic
CAediting_918201chr12_101741313_+ncRNA_intronic
CAediting_918202chr12_101741318_+ncRNA_intronic
CAediting_918203chr12_101741325_+ncRNA_intronic
CAediting_918204chr12_101741329_+ncRNA_intronic
CAediting_918205chr12_101741330_+ncRNA_intronic
CAediting_918206chr12_101741332_+ncRNA_intronic
CAediting_918207chr12_101741333_+ncRNA_intronic
CAediting_918208chr12_101741343_+ncRNA_intronic
CAediting_918209chr12_101741344_+ncRNA_intronic
CAediting_918210chr12_101741357_+ncRNA_intronic
CAediting_918211chr12_101741360_+ncRNA_intronic
CAediting_918212chr12_101741366_+ncRNA_intronic
CAediting_918213chr12_101741383_+ncRNA_intronic
CAediting_918214chr12_101741430_+ncRNA_intronic
CAediting_918215chr12_101741433_+ncRNA_intronic
CAediting_918216chr12_101741437_+ncRNA_intronic
CAediting_918217chr12_101741439_+ncRNA_intronic
CAediting_918218chr12_101741452_+ncRNA_intronic
CAediting_918219chr12_101741454_+ncRNA_intronic
CAediting_918220chr12_101741465_+ncRNA_intronic
CAediting_918221chr12_101741471_+ncRNA_intronic
CAediting_918222chr12_101741479_+ncRNA_intronic
CAediting_918223chr12_101741487_+ncRNA_intronic
CAediting_918224chr12_101741982_+ncRNA_intronic
CAediting_918225chr12_101742008_+ncRNA_intronic
CAediting_918226chr12_101742125_+ncRNA_intronic
CAediting_918227chr12_101742132_+ncRNA_intronic
CAediting_918228chr12_101742135_+ncRNA_intronic
CAediting_918229chr12_101742136_+ncRNA_intronic
CAediting_918230chr12_101742139_+ncRNA_intronic
CAediting_918231chr12_101742141_+ncRNA_intronic
CAediting_918232chr12_101742151_+ncRNA_intronic
CAediting_918233chr12_101742156_+ncRNA_intronic
CAediting_918234chr12_101742166_+ncRNA_intronic
CAediting_918235chr12_101742167_+ncRNA_intronic
CAediting_918236chr12_101742168_+ncRNA_intronic
CAediting_918237chr12_101742169_+ncRNA_intronic
CAediting_918238chr12_101742174_+ncRNA_intronic
CAediting_918239chr12_101742176_+ncRNA_intronic
CAediting_918240chr12_101742179_+ncRNA_intronic
CAediting_918241chr12_101742190_+ncRNA_intronic
CAediting_918242chr12_101742191_+ncRNA_intronic
CAediting_918243chr12_101742196_+ncRNA_intronic
CAediting_918244chr12_101742213_+ncRNA_intronic
CAediting_918245chr12_101742218_+ncRNA_intronic
CAediting_918246chr12_101742219_+ncRNA_intronic
CAediting_918247chr12_101742221_+ncRNA_intronic
CAediting_918248chr12_101742222_+ncRNA_intronic
CAediting_918249chr12_101742225_+ncRNA_intronic
CAediting_918250chr12_101742233_+ncRNA_intronic
CAediting_918251chr12_101742234_+ncRNA_intronic
CAediting_918252chr12_101742236_+ncRNA_intronic
CAediting_918253chr12_101742238_+ncRNA_intronic
CAediting_918254chr12_101742241_+ncRNA_intronic
CAediting_918255chr12_101742242_+ncRNA_intronic
CAediting_918256chr12_101742243_+ncRNA_intronic
CAediting_918257chr12_101742247_+ncRNA_intronic
CAediting_918258chr12_101742265_+ncRNA_intronic
CAediting_918259chr12_101742266_+ncRNA_intronic
CAediting_918260chr12_101742272_+ncRNA_intronic
CAediting_918261chr12_101742273_+ncRNA_intronic
CAediting_918262chr12_101742276_+ncRNA_intronic
CAediting_918263chr12_101742279_+ncRNA_intronic
CAediting_918264chr12_101742281_+ncRNA_intronic
CAediting_918265chr12_101742292_+ncRNA_intronic
CAediting_918266chr12_101742303_+ncRNA_intronic
CAediting_918267chr12_101742325_+ncRNA_intronic
CAediting_918268chr12_101742333_+ncRNA_intronic
CAediting_918269chr12_101742343_+ncRNA_intronic
CAediting_918270chr12_101742344_+ncRNA_intronic
CAediting_918271chr12_101742356_+ncRNA_intronic
CAediting_918272chr12_101742362_+ncRNA_intronic
CAediting_918273chr12_101742363_+ncRNA_intronic
CAediting_918274chr12_101742364_+ncRNA_intronic
CAediting_918275chr12_101742368_+ncRNA_intronic
CAediting_918276chr12_101742370_+ncRNA_intronic
CAediting_918277chr12_101742371_+ncRNA_intronic
CAediting_918278chr12_101743713_+splicing
CAediting_918279chr12_101743717_+ncRNA_exonic
CAediting_918280chr12_101743719_+ncRNA_exonic
CAediting_918281chr12_101743727_+ncRNA_exonic
CAediting_918282chr12_101743729_+ncRNA_exonic
CAediting_918283chr12_101743735_+ncRNA_exonic
CAediting_918284chr12_101743736_+ncRNA_exonic
CAediting_918285chr12_101743752_+ncRNA_exonic
CAediting_918286chr12_101743759_+ncRNA_exonic
CAediting_918287chr12_101743762_+ncRNA_exonic
CAediting_918288chr12_101743781_+ncRNA_exonic
CAediting_918289chr12_101743784_+ncRNA_exonic
CAediting_918290chr12_101743790_+ncRNA_exonic
CAediting_918291chr12_101743809_+ncRNA_exonic
CAediting_918292chr12_101743810_+ncRNA_exonic
CAediting_918293chr12_101743823_+ncRNA_exonic
CAediting_918294chr12_101743840_+ncRNA_exonic
CAediting_918295chr12_101743843_+ncRNA_exonic
CAediting_918296chr12_101743847_+ncRNA_exonic
CAediting_918297chr12_101743863_+ncRNA_exonic
CAediting_918298chr12_101743883_+ncRNA_exonic
CAediting_918299chr12_101743887_+ncRNA_exonic
CAediting_918300chr12_101743892_+ncRNA_exonic
CAediting_918301chr12_101743897_+ncRNA_exonic
CAediting_918302chr12_101743910_+ncRNA_exonic
CAediting_918303chr12_101743931_+ncRNA_exonic
CAediting_918304chr12_101743940_+ncRNA_exonic
CAediting_918305chr12_101743945_+ncRNA_exonic
CAediting_918306chr12_101743950_+ncRNA_exonic
CAediting_918307chr12_101743970_+ncRNA_exonic
CAediting_918308chr12_101743973_+ncRNA_exonic
CAediting_918309chr12_101743992_+ncRNA_exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_918089chr12_101705867_+SINEAluAluSz
CAediting_918090chr12_101706163_+SINEAluAluSg
CAediting_918091chr12_101706164_+SINEAluAluSg
CAediting_918092chr12_101706203_+SINEAluAluSg
CAediting_918093chr12_101706229_+SINEAluAluSg
CAediting_918094chr12_101706239_+SINEAluAluSg
CAediting_918095chr12_101706243_+SINEAluAluSg
CAediting_918096chr12_101708639_+SINEAluAluSz6
CAediting_918097chr12_101708697_+SINEAluAluSz6
CAediting_918098chr12_101708736_+SINEAluAluSz6
CAediting_918099chr12_101708744_+SINEAluAluSz6
CAediting_918100chr12_101708754_+SINEAluAluSz6
CAediting_918101chr12_101708762_+SINEAluAluSz6
CAediting_918102chr12_101708763_+SINEAluAluSz6
CAediting_918103chr12_101708797_+SINEAluAluSz6
CAediting_918104chr12_101708806_+SINEAluAluSz6
CAediting_918105chr12_101708832_+SINEAluAluSz6
CAediting_918106chr12_101709118_+SINEAluAluJr4
CAediting_918107chr12_101709130_+SINEAluAluJr4
CAediting_918108chr12_101709138_+SINEAluAluJr4
CAediting_918109chr12_101709140_+SINEAluAluJr4
CAediting_918110chr12_101709141_+SINEAluAluJr4
CAediting_918111chr12_101709181_+SINEAluAluJr4
CAediting_918112chr12_101709189_+SINEAluAluJr4
CAediting_918113chr12_101709214_+SINEAluAluJr4
CAediting_918114chr12_101709238_+SINEAluAluJr4
CAediting_918115chr12_101709244_+SINEAluAluJr4
CAediting_918116chr12_101709245_+SINEAluAluJr4
CAediting_918117chr12_101709246_+SINEAluAluJr4
CAediting_918118chr12_101709247_+SINEAluAluJr4
CAediting_918119chr12_101709250_+SINEAluAluJr4
CAediting_918120chr12_101709276_+SINEAluAluJr4
CAediting_918121chr12_101709301_+SINEAluAluJr4
CAediting_918122chr12_101709308_+SINEAluAluJr4
CAediting_918123chr12_101709316_+SINEAluAluJr4
CAediting_918124chr12_101709320_+SINEAluAluJr4
CAediting_918125chr12_101709372_+SINEAluAluJr4
CAediting_918126chr12_101710130_+SINEAluAluSz6
CAediting_918127chr12_101712194_+SINEAluAluJb
CAediting_918128chr12_101712283_+SINEAluAluJb
CAediting_918129chr12_101712289_+SINEAluAluJb
CAediting_918130chr12_101718447_+SINEAluAluJr
CAediting_918131chr12_101718585_+SINEAluAluJr
CAediting_918132chr12_101718640_+SINEAluAluJr
CAediting_918133chr12_101718955_+SINEAluAluSx1
CAediting_918134chr12_101718961_+SINEAluAluSx1
CAediting_918135chr12_101718978_+SINEAluAluSx1
CAediting_918136chr12_101719030_+SINEAluAluSx1
CAediting_918137chr12_101721043_+SINEAluAluSz
CAediting_918138chr12_101721210_+SINEAluAluSz
CAediting_918139chr12_101721836_+SINEAluAluSx1
CAediting_918140chr12_101721922_+SINEAluAluSx1
CAediting_918141chr12_101722603_+SINEAluAluJb
CAediting_918143chr12_101727972_+SINEAluAluSz
CAediting_918144chr12_101727976_+SINEAluAluSz
CAediting_918145chr12_101727988_+SINEAluAluSz
CAediting_918146chr12_101727994_+SINEAluAluSz
CAediting_918147chr12_101727995_+SINEAluAluSz
CAediting_918148chr12_101728036_+SINEAluAluSz
CAediting_918149chr12_101728040_+SINEAluAluSz
CAediting_918150chr12_101728064_+SINEAluAluSz
CAediting_918151chr12_101728072_+SINEAluAluSz
CAediting_918152chr12_101728074_+SINEAluAluSz
CAediting_918153chr12_101728085_+SINEAluAluSz
CAediting_918154chr12_101728094_+SINEAluAluSz
CAediting_918155chr12_101728120_+SINEAluAluSz
CAediting_918156chr12_101728129_+SINEAluAluSz
CAediting_918157chr12_101728135_+SINEAluAluSz
CAediting_918158chr12_101728147_+SINEAluAluSz
CAediting_918159chr12_101728156_+SINEAluAluSz
CAediting_918160chr12_101728160_+SINEAluAluSz
CAediting_918161chr12_101728170_+SINEAluAluSz
CAediting_918162chr12_101728171_+SINEAluAluSz
CAediting_918163chr12_101728178_+SINEAluAluSz
CAediting_918164chr12_101728202_+SINEAluAluSz
CAediting_918165chr12_101728205_+SINEAluAluSz
CAediting_918166chr12_101728234_+SINEAluAluSz
CAediting_918167chr12_101728245_+SINEAluAluSz
CAediting_918168chr12_101739721_+SINEAluAluSx1
CAediting_918169chr12_101739727_+SINEAluAluSx1
CAediting_918170chr12_101739888_+SINEAluAluSx1
CAediting_918171chr12_101739902_+SINEAluAluSx1
CAediting_918172chr12_101739903_+SINEAluAluSx1
CAediting_918173chr12_101739910_+SINEAluAluSx1
CAediting_918174chr12_101739914_+SINEAluAluSx1
CAediting_918175chr12_101740781_+SINEAluAluJb
CAediting_918176chr12_101740782_+SINEAluAluJb
CAediting_918177chr12_101740927_+SINEAluAluJb
CAediting_918178chr12_101740928_+SINEAluAluJb
CAediting_918179chr12_101740953_+SINEAluAluJb
CAediting_918180chr12_101740966_+SINEAluAluJb
CAediting_918181chr12_101740972_+SINEAluAluJb
CAediting_918190chr12_101741277_+SINEMIRMIRb
CAediting_918191chr12_101741290_+SINEMIRMIRb
CAediting_918192chr12_101741291_+SINEMIRMIRb
CAediting_918193chr12_101741292_+SINEMIRMIRb
CAediting_918194chr12_101741293_+SINEMIRMIRb
CAediting_918195chr12_101741294_+SINEMIRMIRb
CAediting_918196chr12_101741295_+SINEMIRMIRb
CAediting_918197chr12_101741302_+SINEMIRMIRb
CAediting_918198chr12_101741303_+SINEMIRMIRb
CAediting_918199chr12_101741304_+SINEMIRMIRb
CAediting_918200chr12_101741310_+SINEMIRMIRb
CAediting_918201chr12_101741313_+SINEMIRMIRb
CAediting_918202chr12_101741318_+SINEMIRMIRb
CAediting_918203chr12_101741325_+SINEMIRMIRb
CAediting_918204chr12_101741329_+SINEMIRMIRb
CAediting_918205chr12_101741330_+SINEMIRMIRb
CAediting_918206chr12_101741332_+SINEMIRMIRb
CAediting_918207chr12_101741333_+SINEMIRMIRb
CAediting_918208chr12_101741343_+SINEMIRMIRb
CAediting_918209chr12_101741344_+SINEMIRMIRb
CAediting_918210chr12_101741357_+SINEMIRMIRb
CAediting_918214chr12_101741430_+LINEL2L2b
CAediting_918215chr12_101741433_+LINEL2L2b
CAediting_918216chr12_101741437_+LINEL2L2b
CAediting_918217chr12_101741439_+LINEL2L2b
CAediting_918218chr12_101741452_+LINEL2L2b
CAediting_918219chr12_101741454_+LINEL2L2b
CAediting_918220chr12_101741465_+LINEL2L2b
CAediting_918221chr12_101741471_+LINEL2L2b
CAediting_918222chr12_101741479_+LINEL2L2b
CAediting_918223chr12_101741487_+LINEL2L2b
CAediting_918224chr12_101741982_+SINEAluAluJo
CAediting_918225chr12_101742008_+SINEAluAluJo
CAediting_918227chr12_101742132_+LINEL2L2c
CAediting_918228chr12_101742135_+LINEL2L2c
CAediting_918229chr12_101742136_+LINEL2L2c
CAediting_918230chr12_101742139_+LINEL2L2c
CAediting_918231chr12_101742141_+LINEL2L2c
CAediting_918232chr12_101742151_+LINEL2L2c
CAediting_918233chr12_101742156_+LINEL2L2c
CAediting_918234chr12_101742166_+LINEL2L2c
CAediting_918235chr12_101742167_+LINEL2L2c
CAediting_918236chr12_101742168_+LINEL2L2c
CAediting_918237chr12_101742169_+LINEL2L2c
CAediting_918238chr12_101742174_+LINEL2L2c
CAediting_918239chr12_101742176_+LINEL2L2c
CAediting_918240chr12_101742179_+LINEL2L2c
CAediting_918241chr12_101742190_+LINEL2L2c
CAediting_918242chr12_101742191_+LINEL2L2c
CAediting_918243chr12_101742196_+LINEL2L2c
CAediting_918244chr12_101742213_+LINEL2L2c
CAediting_918245chr12_101742218_+LINEL2L2c
CAediting_918246chr12_101742219_+LINEL2L2c
CAediting_918247chr12_101742221_+LINEL2L2c
CAediting_918248chr12_101742222_+LINEL2L2c
CAediting_918249chr12_101742225_+LINEL2L2c
CAediting_918250chr12_101742233_+LINEL2L2c
CAediting_918251chr12_101742234_+LINEL2L2c
CAediting_918252chr12_101742236_+LINEL2L2c
CAediting_918253chr12_101742238_+LINEL2L2c
CAediting_918254chr12_101742241_+LINEL2L2c
CAediting_918255chr12_101742242_+LINEL2L2c
CAediting_918256chr12_101742243_+LINEL2L2c
CAediting_918257chr12_101742247_+LINEL2L2c
CAediting_918258chr12_101742265_+LINEL2L2c
CAediting_918259chr12_101742266_+LINEL2L2c
CAediting_918260chr12_101742272_+LINEL2L2c
CAediting_918261chr12_101742273_+LINEL2L2c
CAediting_918262chr12_101742276_+SINEMIRMIRb
CAediting_918263chr12_101742279_+SINEMIRMIRb
CAediting_918264chr12_101742281_+SINEMIRMIRb
CAediting_918265chr12_101742292_+SINEMIRMIRb
CAediting_918266chr12_101742303_+SINEMIRMIRb
CAediting_918267chr12_101742325_+SINEMIRMIRb
CAediting_918268chr12_101742333_+SINEMIRMIRb
CAediting_918269chr12_101742343_+SINEMIRMIRb
CAediting_918270chr12_101742344_+SINEMIRMIRb
CAediting_918278chr12_101743713_+SINEAluAluJb
CAediting_918279chr12_101743717_+SINEAluAluJb
CAediting_918280chr12_101743719_+SINEAluAluJb
CAediting_918281chr12_101743727_+SINEAluAluJb
CAediting_918282chr12_101743729_+SINEAluAluJb
CAediting_918283chr12_101743735_+SINEAluAluJb
CAediting_918284chr12_101743736_+SINEAluAluJb
CAediting_918285chr12_101743752_+SINEAluAluJb
CAediting_918286chr12_101743759_+SINEAluAluJb
CAediting_918287chr12_101743762_+SINEAluAluJb
CAediting_918288chr12_101743781_+SINEAluAluJb
CAediting_918289chr12_101743784_+SINEAluAluJb
CAediting_918290chr12_101743790_+SINEAluAluJb
CAediting_918291chr12_101743809_+SINEAluAluJb
CAediting_918292chr12_101743810_+SINEAluAluJb
CAediting_918293chr12_101743823_+SINEAluAluJb
CAediting_918294chr12_101743840_+SINEAluAluJb
CAediting_918295chr12_101743843_+SINEAluAluJb
CAediting_918296chr12_101743847_+SINEAluAluJb
CAediting_918297chr12_101743863_+SINEAluAluJb
CAediting_918298chr12_101743883_+SINEAluAluJb
CAediting_918299chr12_101743887_+SINEAluAluJb
CAediting_918300chr12_101743892_+SINEAluAluJb
CAediting_918301chr12_101743897_+SINEAluAluJb
CAediting_918302chr12_101743910_+SINEAluAluJb
CAediting_918303chr12_101743931_+SINEAluAluJb
CAediting_918304chr12_101743940_+SINEAluAluJb
CAediting_918305chr12_101743945_+SINEAluAluJb
CAediting_918306chr12_101743950_+SINEAluAluJb
CAediting_918307chr12_101743970_+SINEAluAluJb
CAediting_918308chr12_101743973_+SINEAluAluJb
CAediting_918309chr12_101743992_+SINEAluAluJb

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RNA A-to-I editing events in the alternative splicing sites for CHPT1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
IRCAediting_918278chr12_101743713_+101743694:1017437163SS0+1iCAAAATGAACACTTTTGCCAGGC-12.6CAAAATGAACACTTTTGCCGGGC-3.85

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000111666.9.CHPT1.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000111666.9.CHPT1.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CHPT1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CHPT1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CHPT1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_918283chr12_101743735_+ENSG00000111666.9ENST00000546873hsa-miR-513a-5p1017437291017437357mer-m8101743719101743736144.00-17.77
CAediting_918283chr12_101743735_+ENSG00000111666.9ENST00000546873hsa-miR-513a-5p1017437291017437357mer-m8101743719101743736144.00-17.77
CAediting_918283chr12_101743735_+ENSG00000111666.9ENST00000546873hsa-miR-6381017437341017437407mer-1a101743716101743740149.00-29.88
CAediting_918286chr12_101743759_+ENSG00000111666.9ENST00000546873hsa-miR-6747-3p1017437571017437648mer-1a101743743101743764151.00-23.00
CAediting_918287chr12_101743762_+ENSG00000111666.9ENST00000546873hsa-miR-10392-5p1017437551017437617mer-m8101743740101743762157.00-23.07
CAediting_918299chr12_101743887_+ENSG00000111666.9ENST00000546873hsa-miR-660-3p1017438811017438877mer-m8101743867101743888150.00-22.14
CAediting_918299chr12_101743887_+ENSG00000111666.9ENST00000546873hsa-miR-6791-3p1017438821017438887mer-m8101743867101743889146.00-18.56
CAediting_918299chr12_101743887_+ENSG00000111666.9ENST00000546873hsa-miR-6829-3p1017438821017438887mer-m8101743870101743889151.00-18.13
CAediting_918301chr12_101743897_+ENSG00000111666.9ENST00000546873hsa-miR-1224-3p1017438911017438988mer-1a101743879101743898160.00-24.38
CAediting_918301chr12_101743897_+ENSG00000111666.9ENST00000546873hsa-miR-1260a1017438921017438987mer-m8101743882101743899157.00-24.87
CAediting_918301chr12_101743897_+ENSG00000111666.9ENST00000546873hsa-miR-1260b1017438921017438987mer-m8101743881101743899153.00-19.58
CAediting_918301chr12_101743897_+ENSG00000111666.9ENST00000546873hsa-miR-3156-3p1017438931017438986mer101743880101743899141.00-25.93
CAediting_918301chr12_101743897_+ENSG00000111666.9ENST00000546873hsa-miR-3156-3p1017438931017438986mer101743880101743899141.00-25.93
CAediting_918301chr12_101743897_+ENSG00000111666.9ENST00000546873hsa-miR-532-3p1017438931017438997mer-m8101743882101743900150.00-24.75
CAediting_918301chr12_101743897_+ENSG00000111666.9ENST00000546873hsa-miR-6749-3p1017438951017439017mer-m8101743883101743902145.00-19.63
CAediting_918142chr12_101727120_+ENSG00000111666.9ENST00000552215hsa-miR-42721017271161017271238mer-1a101727107101727123142.00-7.13
CAediting_918142chr12_101727120_+ENSG00000111666.9ENST00000552215hsa-miR-60741017271181017271247mer-m8101727106101727125147.00-10.50
CAediting_918146chr12_101727994_+ENSG00000111666.9ENST00000552215hsa-miR-513a-5p1017279881017279947mer-m8101727978101727995144.00-17.77
CAediting_918146chr12_101727994_+ENSG00000111666.9ENST00000552215hsa-miR-513a-5p1017279881017279947mer-m8101727978101727995144.00-17.77
CAediting_918146chr12_101727994_+ENSG00000111666.9ENST00000552215hsa-miR-6381017279931017279997mer-1a101727975101727999151.00-32.73
CAediting_918148chr12_101728036_+ENSG00000111666.9ENST00000552215hsa-miR-372-5p1017280291017280357mer-m8101728014101728036145.00-18.04
CAediting_918150chr12_101728064_+ENSG00000111666.9ENST00000552215hsa-miR-3190-5p1017280571017280637mer-m8101728045101728064154.00-19.64
CAediting_918151chr12_101728072_+ENSG00000111666.9ENST00000552215hsa-miR-23a-5p1017280701017280767mer-m8101728055101728077144.00-21.36
CAediting_918151chr12_101728072_+ENSG00000111666.9ENST00000552215hsa-miR-23b-5p1017280701017280767mer-m8101728057101728077160.00-21.28
CAediting_918151chr12_101728072_+ENSG00000111666.9ENST00000552215hsa-miR-60841017280661017280738mer-1a101728056101728073154.00-28.35
CAediting_918152chr12_101728074_+ENSG00000111666.9ENST00000552215hsa-miR-45081017280721017280787mer-m8101728063101728079144.00-23.87
CAediting_918153chr12_101728085_+ENSG00000111666.9ENST00000552215hsa-miR-374b-3p1017280821017280898mer-1a101728067101728089142.00-11.79
CAediting_918154chr12_101728094_+ENSG00000111666.9ENST00000552215hsa-miR-3680-3p1017280911017280988mer-1a101728076101728098140.00-14.25
CAediting_918154chr12_101728094_+ENSG00000111666.9ENST00000552215hsa-miR-3680-3p1017280911017280988mer-1a101728076101728098140.00-14.25
CAediting_918155chr12_101728120_+ENSG00000111666.9ENST00000552215hsa-miR-4722-3p1017281141017281207mer-m8101728101101728121162.00-30.02
CAediting_918155chr12_101728120_+ENSG00000111666.9ENST00000552215hsa-miR-6727-3p1017281141017281207mer-m8101728102101728121161.00-28.09
CAediting_918155chr12_101728120_+ENSG00000111666.9ENST00000552215hsa-miR-6804-3p1017281171017281237mer-m8101728102101728124166.00-31.60
CAediting_918156chr12_101728129_+ENSG00000111666.9ENST00000552215hsa-miR-140-3p1017281241017281307mer-m8101728108101728131149.00-25.79
CAediting_918158chr12_101728147_+ENSG00000111666.9ENST00000552215hsa-miR-150-5p1017281401017281467mer-m8101728124101728147142.00-15.65
CAediting_918158chr12_101728147_+ENSG00000111666.9ENST00000552215hsa-miR-6778-3p1017281421017281487mer-m8101728129101728149140.00-14.56
CAediting_918160chr12_101728160_+ENSG00000111666.9ENST00000552215hsa-miR-19761017281531017281608mer-1a101728140101728160153.00-21.10
CAediting_918161chr12_101728170_+ENSG00000111666.9ENST00000552215hsa-miR-99001017281681017281747mer-m8101728156101728175155.00-17.23
CAediting_918162chr12_101728171_+ENSG00000111666.9ENST00000552215hsa-miR-3155a1017281681017281747mer-m8101728154101728175141.00-23.58
CAediting_918162chr12_101728171_+ENSG00000111666.9ENST00000552215hsa-miR-3155b1017281681017281747mer-m8101728157101728175141.00-22.98
CAediting_918162chr12_101728171_+ENSG00000111666.9ENST00000552215hsa-miR-4841017281681017281747mer-m8101728154101728175148.00-19.54
CAediting_918163chr12_101728178_+ENSG00000111666.9ENST00000552215hsa-miR-361-3p1017281721017281787mer-m8101728153101728179157.00-31.18
CAediting_918165chr12_101728205_+ENSG00000111666.9ENST00000552215hsa-miR-60811017282031017282097mer-1a101728185101728209145.00-25.64
CAediting_918166chr12_101728234_+ENSG00000111666.9ENST00000552215hsa-miR-10a-5p1017282291017282357mer-m8101728215101728236151.00-21.92
CAediting_918166chr12_101728234_+ENSG00000111666.9ENST00000552215hsa-miR-10b-5p1017282291017282357mer-m8101728215101728236147.00-20.31
CAediting_918166chr12_101728234_+ENSG00000111666.9ENST00000552215hsa-miR-339-5p1017282281017282347mer-m8101728209101728235159.00-29.14
CAediting_918166chr12_101728234_+ENSG00000111666.9ENST00000552215hsa-miR-3620-3p1017282301017282378mer-1a101728215101728237158.00-30.20
CAediting_918166chr12_101728234_+ENSG00000111666.9ENST00000552215hsa-miR-6784-3p1017282321017282398mer-1a101728215101728239148.00-30.95
CAediting_918166chr12_101728234_+ENSG00000111666.9ENST00000552215hsa-miR-6862-3p1017282321017282398mer-1a101728215101728239158.00-23.61
CAediting_918166chr12_101728234_+ENSG00000111666.9ENST00000552215hsa-miR-6862-3p1017282321017282398mer-1a101728215101728239158.00-23.61
CAediting_918289chr12_101743784_+ENSG00000111666.9ENST00000546873hsa-miR-331-3p1017437781017437847mer-m8101743765101743785154.00-23.16
CAediting_918289chr12_101743784_+ENSG00000111666.9ENST00000546873hsa-miR-42921017437771017437837mer-m8101743767101743784145.00-25.13
CAediting_918289chr12_101743784_+ENSG00000111666.9ENST00000546873hsa-miR-6791-5p1017437771017437837mer-m8101743763101743784153.00-28.79
CAediting_918290chr12_101743790_+ENSG00000111666.9ENST00000546873hsa-miR-12001017437861017437916mer101743773101743792144.00-19.84
CAediting_918290chr12_101743790_+ENSG00000111666.9ENST00000546873hsa-miR-121131017437831017437897mer-m8101743772101743790152.00-21.73
CAediting_918290chr12_101743790_+ENSG00000111666.9ENST00000546873hsa-miR-45391017437831017437897mer-m8101743765101743790155.00-22.08
CAediting_918291chr12_101743809_+ENSG00000111666.9ENST00000546873hsa-miR-12081017438021017438098mer-1a101743791101743809155.00-21.50
CAediting_918291chr12_101743809_+ENSG00000111666.9ENST00000546873hsa-miR-1304-3p1017438041017438118mer-1a101743790101743811148.00-18.35
CAediting_918293chr12_101743823_+ENSG00000111666.9ENST00000546873hsa-miR-2467-3p1017438181017438247mer-1a101743803101743824141.00-19.30
CAediting_918293chr12_101743823_+ENSG00000111666.9ENST00000546873hsa-miR-3678-3p1017438181017438258mer-1a101743804101743825140.00-13.45
CAediting_918293chr12_101743823_+ENSG00000111666.9ENST00000546873hsa-miR-4756-3p1017438171017438226mer101743803101743823142.00-13.44
CAediting_918294chr12_101743840_+ENSG00000111666.9ENST00000546873hsa-miR-46371017438381017438447mer-m8101743824101743845140.00-6.81
CAediting_918297chr12_101743863_+ENSG00000111666.9ENST00000546873hsa-miR-68631017438591017438657mer-m8101743844101743866142.00-14.88
CAediting_918300chr12_101743892_+ENSG00000111666.9ENST00000546873hsa-miR-6802-3p1017438901017438967mer-m8101743876101743897156.00-27.21
CAediting_918302chr12_101743910_+ENSG00000111666.9ENST00000546873hsa-miR-3136-3p1017439061017439127mer-m8101743892101743913152.00-17.50
CAediting_918302chr12_101743910_+ENSG00000111666.9ENST00000546873hsa-miR-4747-3p1017439081017439136mer101743893101743914156.00-30.25
CAediting_918302chr12_101743910_+ENSG00000111666.9ENST00000546873hsa-miR-7155-3p1017439061017439127mer-m8101743892101743913148.00-25.98
CAediting_918304chr12_101743940_+ENSG00000111666.9ENST00000546873hsa-miR-79771017439351017439417mer-m8101743924101743942150.00-17.28
CAediting_918305chr12_101743945_+ENSG00000111666.9ENST00000546873hsa-miR-46341017439421017439498mer-1a101743929101743949143.00-20.40
CAediting_918306chr12_101743950_+ENSG00000111666.9ENST00000546873hsa-miR-503-5p1017439481017439547mer-m8101743933101743955153.00-21.07

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_918146chr12_101727994_+ENSG00000111666.9ENST00000552215hsa-miR-10399-5p1017279891017279957mer-m8101727975101727996148-10
CAediting_918147chr12_101727995_+ENSG00000111666.9ENST00000552215hsa-miR-10399-5p1017279891017279957mer-m8101727975101727996148-10
CAediting_918163chr12_101728178_+ENSG00000111666.9ENST00000552215hsa-miR-12811017281751017281817mer-m8101728166101728182141-17.01
CAediting_918152chr12_101728074_+ENSG00000111666.9ENST00000552215hsa-miR-193b-5p1017280711017280777mer-m8101728057101728078146-23.38
CAediting_918142chr12_101727120_+ENSG00000111666.9ENST00000552215hsa-miR-302c-5p1017271141017271218mer-1a101727100101727121140-10.78
CAediting_918159chr12_101728156_+ENSG00000111666.9ENST00000552215hsa-miR-3074-5p1017281531017281608mer-1a101728139101728160145-18.07
CAediting_918160chr12_101728160_+ENSG00000111666.9ENST00000552215hsa-miR-3074-5p1017281531017281608mer-1a101728139101728160145-18.07
CAediting_918143chr12_101727972_+ENSG00000111666.9ENST00000552215hsa-miR-31761017279661017279727mer-m8101727955101727973140-14.33
CAediting_918167chr12_101728245_+ENSG00000111666.9ENST00000552215hsa-miR-31981017282381017282447mer-m8101728224101728245140-14.27
CAediting_918167chr12_101728245_+ENSG00000111666.9ENST00000552215hsa-miR-31981017282381017282447mer-m8101728224101728245140-14.27
CAediting_918166chr12_101728234_+ENSG00000111666.9ENST00000552215hsa-miR-3664-5p1017282291017282357mer-m8101728215101728236151-17.68
CAediting_918143chr12_101727972_+ENSG00000111666.9ENST00000552215hsa-miR-3922-3p1017279661017279727mer-m8101727951101727973149-19.32
CAediting_918145chr12_101727988_+ENSG00000111666.9ENST00000552215hsa-miR-3934-5p1017279851017279917mer-m8101727970101727992151-21
CAediting_918167chr12_101728245_+ENSG00000111666.9ENST00000552215hsa-miR-43091017282381017282447mer-m8101728228101728245145-15.52
CAediting_918167chr12_101728245_+ENSG00000111666.9ENST00000552215hsa-miR-45341017282401017282467mer-m8101728231101728247140-14.2
CAediting_918150chr12_101728064_+ENSG00000111666.9ENST00000552215hsa-miR-4716-5p1017280621017280687mer-m8101728048101728069140-10.69
CAediting_918155chr12_101728120_+ENSG00000111666.9ENST00000552215hsa-miR-4776-3p1017281141017281196mer101728098101728120140-23.89
CAediting_918155chr12_101728120_+ENSG00000111666.9ENST00000552215hsa-miR-4776-3p1017281141017281196mer101728098101728120140-23.89
CAediting_918150chr12_101728064_+ENSG00000111666.9ENST00000552215hsa-miR-4781-3p1017280601017280667mer-m8101728049101728067144-13.86
CAediting_918161chr12_101728170_+ENSG00000111666.9ENST00000552215hsa-miR-498-5p1017281641017281707mer-m8101728149101728171142-9.61
CAediting_918162chr12_101728171_+ENSG00000111666.9ENST00000552215hsa-miR-498-5p1017281641017281707mer-m8101728149101728171142-9.61
CAediting_918147chr12_101727995_+ENSG00000111666.9ENST00000552215hsa-miR-5089-5p1017279931017279997mer-m8101727978101728000148-13.62
CAediting_918145chr12_101727988_+ENSG00000111666.9ENST00000552215hsa-miR-552-3p1017279861017279938mer-1a101727973101727993140-14.36
CAediting_918148chr12_101728036_+ENSG00000111666.9ENST00000552215hsa-miR-6071017280291017280357mer-m8101728019101728036148-9.14
CAediting_918146chr12_101727994_+ENSG00000111666.9ENST00000552215hsa-miR-6504-3p1017279891017279957mer-m8101727975101727996145-14.48
CAediting_918147chr12_101727995_+ENSG00000111666.9ENST00000552215hsa-miR-6504-3p1017279891017279957mer-m8101727975101727996145-14.48
CAediting_918167chr12_101728245_+ENSG00000111666.9ENST00000552215hsa-miR-6514-5p1017282391017282457mer-m8101728223101728246146-15.81
CAediting_918159chr12_101728156_+ENSG00000111666.9ENST00000552215hsa-miR-6747-3p1017281511017281588mer-1a101728137101728158144-22.64
CAediting_918163chr12_101728178_+ENSG00000111666.9ENST00000552215hsa-miR-6778-3p1017281741017281807mer-m8101728163101728181143-17.77
CAediting_918163chr12_101728178_+ENSG00000111666.9ENST00000552215hsa-miR-6791-3p1017281751017281806mer101728162101728181145-23.76
CAediting_918166chr12_101728234_+ENSG00000111666.9ENST00000552215hsa-miR-6794-3p1017282311017282377mer-m8101728221101728238155-22.61
CAediting_918153chr12_101728085_+ENSG00000111666.9ENST00000552215hsa-miR-6832-5p1017280791017280857mer-m8101728064101728086142-16.66
CAediting_918143chr12_101727972_+ENSG00000111666.9ENST00000552215hsa-miR-6894-3p1017279701017279756mer101727956101727976141-21.25
CAediting_918144chr12_101727976_+ENSG00000111666.9ENST00000552215hsa-miR-6894-3p1017279701017279756mer101727956101727976141-21.25
CAediting_918156chr12_101728129_+ENSG00000111666.9ENST00000552215hsa-miR-7151-3p1017281221017281287mer-m8101728109101728129140-16.9
CAediting_918156chr12_101728129_+ENSG00000111666.9ENST00000552215hsa-miR-80521017281281017281347mer-1a101728114101728134141-22.24
CAediting_918167chr12_101728245_+ENSG00000111666.9ENST00000552215hsa-miR-80821017282401017282467mer-m8101728225101728247141-22.09
CAediting_918283chr12_101743735_+ENSG00000111666.9ENST00000546873hsa-miR-10399-5p1017437301017437367mer-m8101743716101743737148-10
CAediting_918284chr12_101743736_+ENSG00000111666.9ENST00000546873hsa-miR-10399-5p1017437301017437367mer-m8101743716101743737148-10
CAediting_918288chr12_101743781_+ENSG00000111666.9ENST00000546873hsa-miR-10400-3p1017437741017437807mer-m8101743760101743781141-22.13
CAediting_918303chr12_101743931_+ENSG00000111666.9ENST00000546873hsa-miR-11841017439251017439317mer-m8101743906101743932159-25.42
CAediting_918303chr12_101743931_+ENSG00000111666.9ENST00000546873hsa-miR-11841017439251017439317mer-m8101743906101743932159-25.42
CAediting_918303chr12_101743931_+ENSG00000111666.9ENST00000546873hsa-miR-11841017439251017439317mer-m8101743906101743932159-25.42
CAediting_918301chr12_101743897_+ENSG00000111666.9ENST00000546873hsa-miR-121251017438931017438997mer-m8101743878101743900154-21.54
CAediting_918301chr12_101743897_+ENSG00000111666.9ENST00000546873hsa-miR-1229-3p1017438921017438987mer-m8101743878101743899152-24.39
CAediting_918288chr12_101743781_+ENSG00000111666.9ENST00000546873hsa-miR-1343-3p1017437771017437837mer-m8101743761101743784150-25.79
CAediting_918289chr12_101743784_+ENSG00000111666.9ENST00000546873hsa-miR-1343-3p1017437771017437837mer-m8101743761101743784150-25.79
CAediting_918292chr12_101743810_+ENSG00000111666.9ENST00000546873hsa-miR-193a-5p1017438081017438147mer-m8101743792101743815141-17.96
CAediting_918287chr12_101743762_+ENSG00000111666.9ENST00000546873hsa-miR-19761017437591017437657mer-m8101743745101743766148-17.48
CAediting_918291chr12_101743809_+ENSG00000111666.9ENST00000546873hsa-miR-200c-5p1017438061017438127mer-m8101743785101743813141-15.7
CAediting_918292chr12_101743810_+ENSG00000111666.9ENST00000546873hsa-miR-200c-5p1017438061017438127mer-m8101743785101743813141-15.7
CAediting_918297chr12_101743863_+ENSG00000111666.9ENST00000546873hsa-miR-218-5p1017438571017438626mer101743843101743863141-18.39
CAediting_918297chr12_101743863_+ENSG00000111666.9ENST00000546873hsa-miR-218-5p1017438571017438626mer101743843101743863141-18.39
CAediting_918302chr12_101743910_+ENSG00000111666.9ENST00000546873hsa-miR-3155a1017439081017439147mer-m8101743894101743915153-20.27
CAediting_918302chr12_101743910_+ENSG00000111666.9ENST00000546873hsa-miR-3155b1017439081017439147mer-m8101743897101743915153-20.27
CAediting_918296chr12_101743847_+ENSG00000111666.9ENST00000546873hsa-miR-3622a-3p1017438441017438507mer-m8101743830101743851145-15.17
CAediting_918296chr12_101743847_+ENSG00000111666.9ENST00000546873hsa-miR-3622b-3p1017438441017438507mer-m8101743832101743851141-14.16
CAediting_918308chr12_101743973_+ENSG00000111666.9ENST00000546873hsa-miR-3664-5p1017439701017439767mer-m8101743954101743977147-16.5
CAediting_918307chr12_101743970_+ENSG00000111666.9ENST00000546873hsa-miR-367-5p1017439671017439748mer-1a101743954101743974142-12.51
CAediting_918308chr12_101743973_+ENSG00000111666.9ENST00000546873hsa-miR-367-5p1017439671017439748mer-1a101743954101743974142-12.51
CAediting_918293chr12_101743823_+ENSG00000111666.9ENST00000546873hsa-miR-36741017438191017438268mer-1a101743804101743826141-8.75
CAediting_918303chr12_101743931_+ENSG00000111666.9ENST00000546873hsa-miR-44181017439261017439327mer-m8101743917101743933146-15.98
CAediting_918306chr12_101743950_+ENSG00000111666.9ENST00000546873hsa-miR-45191017439481017439547mer-m8101743937101743955141-15.7
CAediting_918288chr12_101743781_+ENSG00000111666.9ENST00000546873hsa-miR-46741017437741017437807mer-m8101743761101743781147-23.78
CAediting_918289chr12_101743784_+ENSG00000111666.9ENST00000546873hsa-miR-4680-5p1017437821017437887mer-1a101743768101743788140-14.86
CAediting_918308chr12_101743973_+ENSG00000111666.9ENST00000546873hsa-miR-4714-5p1017439711017439766mer101743956101743977140-24.95
CAediting_918294chr12_101743840_+ENSG00000111666.9ENST00000546873hsa-miR-4735-5p1017438371017438437mer-m8101743823101743844140-4.42
CAediting_918295chr12_101743843_+ENSG00000111666.9ENST00000546873hsa-miR-4735-5p1017438371017438437mer-m8101743823101743844140-4.42
CAediting_918294chr12_101743840_+ENSG00000111666.9ENST00000546873hsa-miR-47751017438361017438427mer-m8101743824101743843147-5.24
CAediting_918295chr12_101743843_+ENSG00000111666.9ENST00000546873hsa-miR-47751017438361017438427mer-m8101743824101743843147-5.24
CAediting_918284chr12_101743736_+ENSG00000111666.9ENST00000546873hsa-miR-5089-5p1017437341017437407mer-m8101743719101743741148-13.62
CAediting_918303chr12_101743931_+ENSG00000111666.9ENST00000546873hsa-miR-509-3-5p1017439261017439327mer-m8101743915101743933154-19.24
CAediting_918303chr12_101743931_+ENSG00000111666.9ENST00000546873hsa-miR-509-5p1017439261017439327mer-m8101743913101743933140-16.58
CAediting_918303chr12_101743931_+ENSG00000111666.9ENST00000546873hsa-miR-509-5p1017439261017439327mer-m8101743913101743933140-16.58
CAediting_918299chr12_101743887_+ENSG00000111666.9ENST00000546873hsa-miR-516a-3p1017438821017438887mer-m8101743872101743889140-16.3
CAediting_918299chr12_101743887_+ENSG00000111666.9ENST00000546873hsa-miR-516a-3p1017438821017438887mer-m8101743872101743889140-16.3
CAediting_918299chr12_101743887_+ENSG00000111666.9ENST00000546873hsa-miR-516b-3p1017438821017438887mer-m8101743872101743889140-16.3
CAediting_918299chr12_101743887_+ENSG00000111666.9ENST00000546873hsa-miR-516b-3p1017438821017438887mer-m8101743872101743889140-16.3
CAediting_918291chr12_101743809_+ENSG00000111666.9ENST00000546873hsa-miR-550a-3p1017438061017438127mer-m8101743790101743813149-20.05
CAediting_918292chr12_101743810_+ENSG00000111666.9ENST00000546873hsa-miR-550a-3p1017438061017438127mer-m8101743790101743813149-20.05
CAediting_918291chr12_101743809_+ENSG00000111666.9ENST00000546873hsa-miR-550a-3p1017438061017438127mer-m8101743790101743813149-20.05
CAediting_918292chr12_101743810_+ENSG00000111666.9ENST00000546873hsa-miR-550a-3p1017438061017438127mer-m8101743790101743813149-20.05
CAediting_918291chr12_101743809_+ENSG00000111666.9ENST00000546873hsa-miR-550a-3p1017438061017438127mer-m8101743790101743813149-20.05
CAediting_918292chr12_101743810_+ENSG00000111666.9ENST00000546873hsa-miR-550a-3p1017438061017438127mer-m8101743790101743813149-20.05
CAediting_918282chr12_101743729_+ENSG00000111666.9ENST00000546873hsa-miR-552-3p1017437281017437347mer-1a101743714101743734140-14.1
CAediting_918297chr12_101743863_+ENSG00000111666.9ENST00000546873hsa-miR-56831017438611017438677mer-m8101743845101743868147-16.86
CAediting_918306chr12_101743950_+ENSG00000111666.9ENST00000546873hsa-miR-56931017439461017439527mer-m8101743933101743953146-17.71
CAediting_918297chr12_101743863_+ENSG00000111666.9ENST00000546873hsa-miR-576-3p1017438591017438657mer-m8101743845101743866140-12.15
CAediting_918283chr12_101743735_+ENSG00000111666.9ENST00000546873hsa-miR-6504-3p1017437301017437367mer-m8101743716101743737149-15.11
CAediting_918284chr12_101743736_+ENSG00000111666.9ENST00000546873hsa-miR-6504-3p1017437301017437367mer-m8101743716101743737149-15.11
CAediting_918288chr12_101743781_+ENSG00000111666.9ENST00000546873hsa-miR-6783-3p1017437771017437837mer-m8101743763101743784151-20.42
CAediting_918289chr12_101743784_+ENSG00000111666.9ENST00000546873hsa-miR-6783-3p1017437771017437837mer-m8101743763101743784151-20.42
CAediting_918300chr12_101743892_+ENSG00000111666.9ENST00000546873hsa-miR-6787-3p1017438861017438927mer-m8101743872101743893143-19.47
CAediting_918293chr12_101743823_+ENSG00000111666.9ENST00000546873hsa-miR-6832-5p1017438171017438248mer-1a101743802101743824140-19.73
CAediting_918301chr12_101743897_+ENSG00000111666.9ENST00000546873hsa-miR-6862-3p1017438921017438987mer-1a101743874101743898140-27.53
CAediting_918301chr12_101743897_+ENSG00000111666.9ENST00000546873hsa-miR-6862-3p1017438921017438987mer-1a101743874101743898140-27.53
CAediting_918301chr12_101743897_+ENSG00000111666.9ENST00000546873hsa-miR-6881-3p1017438961017439016mer101743879101743902145-18.5
CAediting_918299chr12_101743887_+ENSG00000111666.9ENST00000546873hsa-miR-7162-5p1017438821017438887mer-m8101743873101743889142-19.51
CAediting_918307chr12_101743970_+ENSG00000111666.9ENST00000546873hsa-miR-744-3p1017439661017439727mer-m8101743953101743973146-16.92
CAediting_918308chr12_101743973_+ENSG00000111666.9ENST00000546873hsa-miR-744-3p1017439661017439727mer-m8101743953101743973146-16.92
CAediting_918288chr12_101743781_+ENSG00000111666.9ENST00000546873hsa-miR-939-3p1017437761017437838mer-1a101743763101743783142-17.55
CAediting_918303chr12_101743931_+ENSG00000111666.9ENST00000546873hsa-miR-9431017439291017439346mer101743913101743935141-23.75

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000111666.9ENST00000549872hsa-miR-624-3p1017265411017265488mer-1a101726528101726548158-12.41
CAediting_980496chr14_31014685_-ENSG00000111666.9ENST00000552215hsa-miR-624-3p1017265411017265488mer-1a101726528101726548158-12.41
CAediting_980496chr14_31014685_-ENSG00000111666.9ENST00000546873hsa-miR-624-3p1017438111017438177mer-m8101743798101743818162-14.79
CAediting_117844chr1_162342605_+ENSG00000111666.9ENST00000552351hsa-miR-556-3p1017232171017232248mer-1a101723202101723224153-10.34
CAediting_117844chr1_162342605_+ENSG00000111666.9ENST00000552215hsa-miR-556-3p1017232171017232248mer-1a101723202101723224153-10.34
CAediting_442554chr5_154685830_+ENSG00000111666.9ENST00000552215hsa-miR-13031017291941017292007mer-m8101729181101729201158-16.95
CAediting_117844chr1_162342605_+ENSG00000111666.9ENST00000552329hsa-miR-556-3p1017232171017232248mer-1a101723202101723224153-10.34

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1351755chr19_40282625_-ENSG00000111666.9ENST00000549872hsa-miR-6411017265591017265657mer-1a101726543101726565141-13.59
CAediting_688080chr9_63819626_+ENSG00000111666.9ENST00000552215hsa-miR-4477b1017275821017275898mer-1a101727564101727589155-14.01
CAediting_688080chr9_63819626_+ENSG00000111666.9ENST00000552215hsa-miR-4477b1017285731017285808mer-1a101728559101728580142-7.9
CAediting_1229413chr17_67471544_+ENSG00000111666.9ENST00000552215hsa-miR-548aa1017286001017286067mer-m8101728583101728607140-5.54
CAediting_1229414chr17_67471546_+ENSG00000111666.9ENST00000552215hsa-miR-548aa1017286001017286067mer-m8101728583101728607140-5.54
CAediting_1351755chr19_40282625_-ENSG00000111666.9ENST00000552215hsa-miR-6411017283551017283617mer-m8101728339101728362152-17.77
CAediting_1351755chr19_40282625_-ENSG00000111666.9ENST00000552215hsa-miR-6411017283881017283958mer-1a101728373101728395151-14.11
CAediting_1351755chr19_40282625_-ENSG00000111666.9ENST00000552215hsa-miR-6411017265591017265657mer-1a101726543101726565141-13.59
CAediting_1351755chr19_40282625_-ENSG00000111666.9ENST00000552215hsa-miR-6411017296341017296418mer-1a101729618101729641146-11.34

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CHPT1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for CHPT1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_918284chr12_101743736_+0.003799860874371250.240580991123997....
BRCACAediting_918286chr12_101743759_+0.0008556717912820830.212101164151613....
BRCACAediting_918287chr12_101743762_+9.7854318062687e-050.317852593690869....
BRCACAediting_918298chr12_101743883_+..0.002223642048006750.315028474938415..
BRCACAediting_918299chr12_101743887_+0.001520484071878490.232131039824052....
THCACAediting_918299chr12_101743887_+0.002553242429554270.215447783090254....

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Relation with cancer stages for CHPT1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_918287chr12_101743762_+0.01409663162280120.205612832760046
THCApathologic_stageCAediting_918286chr12_101743759_+0.002534356420247280.166181682679967
THCApathologic_stageCAediting_918298chr12_101743883_+0.03956159789820690.201218501488139

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Relation with survival for CHPT1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for CHPT1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CHPT1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
CHPT1C0035222Respiratory Distress Syndrome, Adult1CTD_human