|
Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples | |
The effects of the RNA editing to the stability of the RNA structures | |
Editing gene: PCDHGA1 (CAeditome ID:56114) |
Gene summary for PCDHGA1 |
Gene summary |
Gene information | Gene symbol | PCDHGA1 | Gene ID | 56114 |
Gene name | protocadherin gamma subfamily A, 1 | |
Synonyms | PCDH-GAMMA-A1 | |
Cytomap | 5q31.3 | |
Type of gene | protein-coding | |
Description | protocadherin gamma-A1 | |
Modification date | 20210518 | |
UniProtAcc | Q9Y5H4 | |
Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for PCDHGA1 |
RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure. |
RNA editing frequencies across 33 cancers of gene: ENSG00000204956.5 |
RNA A-to-I editing events in Cancer. |
CAediting_437155(141333737, +), CAediting_437156(141333761, +), CAediting_437157(141333787, +), CAediting_437158(141333799, +), CAediting_437159(141334362, +), CAediting_437160(141334370, +), CAediting_437161(141334376, +), CAediting_437162(141334377, +), CAediting_437163(141334380, +), CAediting_437164(141334387, +), CAediting_437165(141334401, +), CAediting_437166(141334535, +), CAediting_437167(141334552, +), CAediting_437168(141347299, +), CAediting_437169(141347375, +), CAediting_437170(141347540, +), CAediting_437171(141349169, +), CAediting_437172(141349170, +), CAediting_437173(141349251, +), CAediting_437174(141349284, +), CAediting_437175(141349291, +), CAediting_437176(141352761, +), CAediting_437177(141352780, +), CAediting_437178(141352794, +), CAediting_437179(141352834, +), CAediting_437180(141352835, +), CAediting_437181(141352885, +), CAediting_437182(141352890, +), CAediting_437183(141352892, +), CAediting_437184(141352894, +), CAediting_437185(141352908, +), CAediting_437186(141352916, +), CAediting_437187(141352937, +), CAediting_437188(141367360, +), CAediting_437189(141367481, +), CAediting_437190(141367519, +), CAediting_437191(141373394, +), CAediting_437192(141373402, +), CAediting_437193(141373465, +), CAediting_437194(141376767, +), CAediting_437195(141376961, +), CAediting_437196(141376970, +), CAediting_437197(141377342, +), CAediting_437198(141377351, +), CAediting_437199(141377364, +), CAediting_437200(141377377, +), CAediting_437201(141377380, +), CAediting_437202(141377431, +), CAediting_437203(141377434, +), CAediting_437204(141377435, +), CAediting_437205(141377437, +), CAediting_437206(141377438, +), CAediting_437207(141377442, +), CAediting_437208(141377443, +), CAediting_437209(141377444, +), CAediting_437210(141377445, +), CAediting_437211(141377446, +), CAediting_437212(141377450, +), CAediting_437213(141377454, +), CAediting_437214(141377475, +), CAediting_437215(141377481, +), CAediting_437216(141377490, +), CAediting_437217(141377493, +), CAediting_437218(141377505, +), CAediting_437219(141377515, +), CAediting_437220(141377516, +), CAediting_437221(141377521, +), CAediting_437222(141378269, +), CAediting_437223(141378270, +), CAediting_437224(141378276, +), CAediting_437225(141378308, +), CAediting_437226(141378309, +), CAediting_437227(141378313, +), CAediting_437228(141378327, +), CAediting_437229(141378333, +), CAediting_437230(141378336, +), CAediting_437231(141378337, +), CAediting_437232(141378347, +), CAediting_437233(141378358, +), CAediting_437234(141378361, +), CAediting_437235(141378365, +), CAediting_437236(141378367, +), CAediting_437237(141378370, +), CAediting_437238(141378372, +), CAediting_437239(141378376, +), CAediting_437240(141378380, +), CAediting_437241(141378402, +), CAediting_437242(141378403, +), CAediting_437243(141378412, +), CAediting_437244(141378429, +), CAediting_437245(141378451, +), CAediting_437246(141378455, +), CAediting_437247(141378505, +), CAediting_437248(141380039, +), CAediting_437249(141381886, +), CAediting_437250(141391412, +), CAediting_437251(141391477, +), CAediting_437252(141401244, +), CAediting_437253(141401262, +), CAediting_437254(141401263, +), CAediting_437255(141401294, +), CAediting_437256(141401297, +), CAediting_437257(141405443, +), CAediting_437258(141405514, +), CAediting_437259(141405520, +), CAediting_437260(141405706, +), CAediting_437261(141405739, +), CAediting_437262(141405740, +), CAediting_437263(141406256, +), CAediting_437264(141410934, +), CAediting_437265(141410954, +), CAediting_437266(141410971, +), CAediting_437267(141410979, +), CAediting_437268(141410980, +), CAediting_437269(141410983, +), CAediting_437270(141411032, +), CAediting_437271(141411035, +), CAediting_437272(141411052, +), CAediting_437273(141411111, +), CAediting_437274(141411112, +), CAediting_437275(141411308, +), CAediting_437276(141411312, +), CAediting_437277(141411343, +), CAediting_437278(141411344, +), CAediting_437279(141411362, +), CAediting_437280(141411365, +), CAediting_437281(141411383, +), CAediting_437282(141411388, +), CAediting_437283(141411427, +), CAediting_437284(141411437, +), CAediting_437285(141411450, +), CAediting_437286(141411486, +), CAediting_437287(141411517, +), CAediting_437288(141411529, +), CAediting_437289(141411566, +), CAediting_437290(141411568, +), CAediting_437291(141411627, +), CAediting_437292(141411628, +), CAediting_437293(141411633, +), CAediting_437294(141411636, +), CAediting_437295(141411644, +), CAediting_437296(141411650, +), CAediting_437297(141411676, +), CAediting_437298(141411681, +), CAediting_437299(141411695, +), CAediting_437300(141411731, +), CAediting_437301(141411738, +), CAediting_437302(141411771, +), CAediting_437303(141411791, +), CAediting_437304(141411793, +), CAediting_437305(141411794, +), CAediting_437306(141411802, +), CAediting_437307(141411811, +), CAediting_437308(141411835, +), CAediting_437309(141433238, +), CAediting_437310(141433245, +), CAediting_437311(141433273, +), CAediting_437312(141433297, +), CAediting_437313(141433323, +), CAediting_437314(141433420, +), CAediting_437315(141433424, +), CAediting_437316(141433494, +), CAediting_437317(141433495, +), CAediting_437318(141433508, +), CAediting_437319(141433717, +), CAediting_437320(141433757, +), CAediting_437321(141433758, +), CAediting_437322(141433778, +), CAediting_437323(141433787, +), CAediting_437324(141437940, +), CAediting_437325(141437993, +), CAediting_437326(141438010, +), CAediting_437327(141438015, +), CAediting_437328(141439113, +), CAediting_437329(141443285, +), CAediting_437330(141443405, +), CAediting_437331(141443471, +), CAediting_437332(141446741, +), CAediting_437333(141448011, +), CAediting_437334(141448076, +), CAediting_437335(141449329, +), CAediting_437336(141450550, +), CAediting_437337(141450673, +), CAediting_437338(141450674, +), CAediting_437339(141451010, +), CAediting_437340(141451696, +), CAediting_437341(141451698, +), CAediting_437342(141451856, +), CAediting_437343(141452672, +), CAediting_437344(141453177, +), CAediting_437345(141453183, +), CAediting_437346(141453256, +), CAediting_437347(141453386, +), CAediting_437348(141453394, +), CAediting_437349(141453406, +), CAediting_437350(141454486, +), CAediting_437351(141456096, +), CAediting_437352(141458845, +), CAediting_437353(141459957, +), CAediting_437354(141459958, +), CAediting_437355(141459998, +), CAediting_437356(141461693, +), CAediting_437357(141464010, +), CAediting_437358(141464031, +), CAediting_437359(141464100, +), CAediting_437360(141464154, +), CAediting_437361(141464167, +), CAediting_437362(141464171, +), CAediting_437363(141464190, +), CAediting_437364(141464217, +), CAediting_437365(141464755, +), CAediting_437366(141464808, +), CAediting_437367(141464813, +), CAediting_437368(141464851, +), CAediting_437369(141464856, +), CAediting_437370(141464864, +), CAediting_437371(141464868, +), CAediting_437372(141464872, +), CAediting_437373(141464878, +), CAediting_437374(141464880, +), CAediting_437375(141464900, +), CAediting_437376(141464977, +), CAediting_437377(141464994, +), CAediting_437378(141465010, +), CAediting_437379(141465868, +), CAediting_437380(141466210, +), CAediting_437381(141466283, +), CAediting_437382(141466310, +), CAediting_437383(141467122, +), CAediting_437384(141467200, +), CAediting_437385(141467287, +), CAediting_437386(141467327, +), CAediting_437387(141467336, +), CAediting_437388(141467685, +), CAediting_437389(141467712, +), CAediting_437390(141467726, +), CAediting_437391(141467731, +), CAediting_437392(141467742, +), CAediting_437393(141467762, +), CAediting_437394(141467776, +), CAediting_437395(141467784, +), CAediting_437396(141467785, +), CAediting_437397(141467788, +), CAediting_437398(141467798, +), CAediting_437399(141467800, +), CAediting_437400(141467806, +), CAediting_437401(141467811, +), CAediting_437402(141467816, +), CAediting_437403(141467856, +), CAediting_437404(141467859, +), CAediting_437405(141467879, +), CAediting_437406(141467893, +), CAediting_437407(141467894, +), CAediting_437408(141467906, +), CAediting_437409(141467911, +), CAediting_437410(141467921, +), CAediting_437411(141467927, +), CAediting_437412(141467933, +), CAediting_437413(141467936, +), CAediting_437414(141467939, +), CAediting_437415(141467951, +), CAediting_437416(141468061, +), CAediting_437417(141468063, +), CAediting_437418(141468069, +), CAediting_437419(141468070, +), CAediting_437420(141468075, +), CAediting_437421(141468124, +), CAediting_437422(141468126, +), CAediting_437423(141468147, +), CAediting_437424(141468149, +), CAediting_437425(141468163, +), CAediting_437426(141468169, +), CAediting_437427(141468172, +), CAediting_437428(141468173, +), CAediting_437429(141468174, +), CAediting_437430(141468175, +), CAediting_437431(141468186, +), CAediting_437432(141468204, +), CAediting_437433(141468205, +), CAediting_437434(141468210, +), CAediting_437435(141468224, +), CAediting_437436(141468231, +), CAediting_437437(141468237, +), CAediting_437438(141468245, +), CAediting_437439(141468246, +), CAediting_437440(141468257, +), CAediting_437441(141468270, +), CAediting_437442(141468275, +), CAediting_437443(141468280, +), CAediting_437444(141468745, +), CAediting_437445(141469021, +), CAediting_437446(141469022, +), CAediting_437447(141469043, +), CAediting_437448(141469086, +), CAediting_437449(141469094, +), CAediting_437450(141469118, +), CAediting_437451(141469129, +), CAediting_437452(141469133, +), CAediting_437453(141469147, +), CAediting_437454(141469155, +), CAediting_437455(141469165, +), CAediting_437456(141469182, +), CAediting_437457(141469183, +), CAediting_437458(141469196, +), CAediting_437459(141469206, +), CAediting_437460(141469232, +), CAediting_437461(141469257, +), CAediting_437462(141469264, +), CAediting_437463(141469265, +), CAediting_437464(141469313, +), CAediting_437465(141469321, +), CAediting_437466(141469322, +), CAediting_437467(141469364, +), CAediting_437468(141469454, +), CAediting_437469(141469671, +), CAediting_437470(141469691, +), CAediting_437471(141469710, +), CAediting_437472(141469713, +), CAediting_437473(141469724, +), CAediting_437474(141469726, +), CAediting_437475(141469727, +), CAediting_437476(141469728, +), CAediting_437477(141469860, +), CAediting_437478(141469893, +), CAediting_437479(141469906, +), CAediting_437480(141469921, +), CAediting_437481(141470009, +), CAediting_437482(141470050, +), CAediting_437483(141470084, +), CAediting_437484(141470092, +), CAediting_437485(141470108, +), CAediting_437486(141470765, +), CAediting_437487(141470788, +), CAediting_437488(141470792, +), CAediting_437489(141470800, +), CAediting_437490(141470821, +), CAediting_437491(141470830, +), CAediting_437492(141470937, +), CAediting_437493(141470951, +), CAediting_437494(141471150, +), CAediting_437495(141471234, +), CAediting_437496(141471251, +), CAediting_437497(141471294, +), CAediting_437498(141471325, +), CAediting_437499(141472364, +), CAediting_437500(141472387, +), CAediting_437501(141472461, +), CAediting_437502(141472465, +), CAediting_437503(141472724, +), CAediting_437504(141472730, +), CAediting_437505(141472731, +), CAediting_437506(141472784, +), CAediting_437507(141472785, +), CAediting_437508(141472796, +), CAediting_437509(141472809, +), CAediting_437510(141472822, +), CAediting_437511(141472825, +), CAediting_437512(141472826, +), CAediting_437513(141472829, +), CAediting_437514(141472831, +), CAediting_437515(141472839, +), CAediting_437516(141472892, +), CAediting_437517(141472898, +), CAediting_437518(141472907, +), CAediting_437519(141472911, +), CAediting_437520(141472912, +), CAediting_437521(141472935, +), CAediting_437522(141472936, +), CAediting_437523(141480318, +), CAediting_437524(141480354, +), CAediting_437525(141480378, +), CAediting_437526(141480650, +), CAediting_437527(141480655, +), CAediting_437528(141480656, +), CAediting_437529(141480858, +), CAediting_437530(141480861, +), CAediting_437531(141480880, +), CAediting_437532(141480906, +), CAediting_437533(141480918, +), CAediting_437534(141480930, +), CAediting_437535(141480983, +), CAediting_437536(141480993, +), CAediting_437537(141481040, +), CAediting_437538(141481075, +), CAediting_437539(141481590, +), CAediting_437540(141481964, +), CAediting_437541(141481974, +), CAediting_437542(141482034, +), CAediting_437543(141483067, +), CAediting_437544(141503492, +), CAediting_437545(141503493, +), CAediting_437546(141503501, +), CAediting_437547(141503505, +), CAediting_437548(141504978, +), CAediting_437549(141504986, +), |
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RNA editing positional annotations for PCDHGA1 using Annovar |
Protein coding RNA editing(s). |
CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
CAeditome ID | Position | Variant type |
CAediting_437155 | chr5_141333737_+ | UTR3 |
CAediting_437156 | chr5_141333761_+ | UTR3 |
CAediting_437157 | chr5_141333787_+ | UTR3 |
CAediting_437158 | chr5_141333799_+ | UTR3 |
CAediting_437159 | chr5_141334362_+ | UTR3 |
CAediting_437160 | chr5_141334370_+ | UTR3 |
CAediting_437161 | chr5_141334376_+ | UTR3 |
CAediting_437162 | chr5_141334377_+ | UTR3 |
CAediting_437163 | chr5_141334380_+ | UTR3 |
CAediting_437164 | chr5_141334387_+ | UTR3 |
CAediting_437165 | chr5_141334401_+ | UTR3 |
CAediting_437166 | chr5_141334535_+ | UTR3 |
CAediting_437167 | chr5_141334552_+ | UTR3 |
CAediting_437168 | chr5_141347299_+ | intronic |
CAediting_437169 | chr5_141347375_+ | intronic |
CAediting_437170 | chr5_141347540_+ | intronic |
CAediting_437171 | chr5_141349169_+ | intronic |
CAediting_437172 | chr5_141349170_+ | intronic |
CAediting_437173 | chr5_141349251_+ | intronic |
CAediting_437174 | chr5_141349284_+ | intronic |
CAediting_437175 | chr5_141349291_+ | intronic |
CAediting_437176 | chr5_141352761_+ | intronic |
CAediting_437177 | chr5_141352780_+ | intronic |
CAediting_437178 | chr5_141352794_+ | intronic |
CAediting_437179 | chr5_141352834_+ | intronic |
CAediting_437180 | chr5_141352835_+ | intronic |
CAediting_437181 | chr5_141352885_+ | intronic |
CAediting_437182 | chr5_141352890_+ | intronic |
CAediting_437183 | chr5_141352892_+ | intronic |
CAediting_437184 | chr5_141352894_+ | intronic |
CAediting_437185 | chr5_141352908_+ | intronic |
CAediting_437186 | chr5_141352916_+ | intronic |
CAediting_437187 | chr5_141352937_+ | intronic |
CAediting_437188 | chr5_141367360_+ | UTR3 |
CAediting_437189 | chr5_141367481_+ | UTR3 |
CAediting_437190 | chr5_141367519_+ | UTR3 |
CAediting_437191 | chr5_141373394_+ | intronic |
CAediting_437192 | chr5_141373402_+ | intronic |
CAediting_437193 | chr5_141373465_+ | intronic |
CAediting_437194 | chr5_141376767_+ | UTR3 |
CAediting_437195 | chr5_141376961_+ | UTR3 |
CAediting_437196 | chr5_141376970_+ | UTR3 |
CAediting_437197 | chr5_141377342_+ | UTR3 |
CAediting_437198 | chr5_141377351_+ | UTR3 |
CAediting_437199 | chr5_141377364_+ | UTR3 |
CAediting_437200 | chr5_141377377_+ | UTR3 |
CAediting_437201 | chr5_141377380_+ | UTR3 |
CAediting_437202 | chr5_141377431_+ | UTR3 |
CAediting_437203 | chr5_141377434_+ | UTR3 |
CAediting_437204 | chr5_141377435_+ | UTR3 |
CAediting_437205 | chr5_141377437_+ | UTR3 |
CAediting_437206 | chr5_141377438_+ | UTR3 |
CAediting_437207 | chr5_141377442_+ | UTR3 |
CAediting_437208 | chr5_141377443_+ | UTR3 |
CAediting_437209 | chr5_141377444_+ | UTR3 |
CAediting_437210 | chr5_141377445_+ | UTR3 |
CAediting_437211 | chr5_141377446_+ | UTR3 |
CAediting_437212 | chr5_141377450_+ | UTR3 |
CAediting_437213 | chr5_141377454_+ | UTR3 |
CAediting_437214 | chr5_141377475_+ | UTR3 |
CAediting_437215 | chr5_141377481_+ | UTR3 |
CAediting_437216 | chr5_141377490_+ | UTR3 |
CAediting_437217 | chr5_141377493_+ | UTR3 |
CAediting_437218 | chr5_141377505_+ | UTR3 |
CAediting_437219 | chr5_141377515_+ | UTR3 |
CAediting_437220 | chr5_141377516_+ | UTR3 |
CAediting_437221 | chr5_141377521_+ | UTR3 |
CAediting_437222 | chr5_141378269_+ | UTR3 |
CAediting_437223 | chr5_141378270_+ | UTR3 |
CAediting_437224 | chr5_141378276_+ | UTR3 |
CAediting_437225 | chr5_141378308_+ | UTR3 |
CAediting_437226 | chr5_141378309_+ | UTR3 |
CAediting_437227 | chr5_141378313_+ | UTR3 |
CAediting_437228 | chr5_141378327_+ | UTR3 |
CAediting_437229 | chr5_141378333_+ | UTR3 |
CAediting_437230 | chr5_141378336_+ | UTR3 |
CAediting_437231 | chr5_141378337_+ | UTR3 |
CAediting_437232 | chr5_141378347_+ | UTR3 |
CAediting_437233 | chr5_141378358_+ | UTR3 |
CAediting_437234 | chr5_141378361_+ | UTR3 |
CAediting_437235 | chr5_141378365_+ | UTR3 |
CAediting_437236 | chr5_141378367_+ | UTR3 |
CAediting_437237 | chr5_141378370_+ | UTR3 |
CAediting_437238 | chr5_141378372_+ | UTR3 |
CAediting_437239 | chr5_141378376_+ | UTR3 |
CAediting_437240 | chr5_141378380_+ | UTR3 |
CAediting_437241 | chr5_141378402_+ | UTR3 |
CAediting_437242 | chr5_141378403_+ | UTR3 |
CAediting_437243 | chr5_141378412_+ | UTR3 |
CAediting_437244 | chr5_141378429_+ | UTR3 |
CAediting_437245 | chr5_141378451_+ | UTR3 |
CAediting_437246 | chr5_141378455_+ | UTR3 |
CAediting_437247 | chr5_141378505_+ | UTR3 |
CAediting_437248 | chr5_141380039_+ | intronic |
CAediting_437249 | chr5_141381886_+ | intronic |
CAediting_437250 | chr5_141391412_+ | UTR5;UTR3 |
CAediting_437251 | chr5_141391477_+ | UTR5;UTR3 |
CAediting_437252 | chr5_141401244_+ | intronic |
CAediting_437253 | chr5_141401262_+ | intronic |
CAediting_437254 | chr5_141401263_+ | intronic |
CAediting_437255 | chr5_141401294_+ | intronic |
CAediting_437256 | chr5_141401297_+ | intronic |
CAediting_437257 | chr5_141405443_+ | UTR3 |
CAediting_437258 | chr5_141405514_+ | intronic |
CAediting_437259 | chr5_141405520_+ | intronic |
CAediting_437260 | chr5_141405706_+ | intronic |
CAediting_437261 | chr5_141405739_+ | intronic |
CAediting_437262 | chr5_141405740_+ | intronic |
CAediting_437263 | chr5_141406256_+ | intronic |
CAediting_437264 | chr5_141410934_+ | UTR3 |
CAediting_437265 | chr5_141410954_+ | UTR3 |
CAediting_437266 | chr5_141410971_+ | UTR3 |
CAediting_437267 | chr5_141410979_+ | UTR3 |
CAediting_437268 | chr5_141410980_+ | UTR3 |
CAediting_437269 | chr5_141410983_+ | UTR3 |
CAediting_437270 | chr5_141411032_+ | UTR3 |
CAediting_437271 | chr5_141411035_+ | UTR3 |
CAediting_437272 | chr5_141411052_+ | UTR3 |
CAediting_437273 | chr5_141411111_+ | UTR3 |
CAediting_437274 | chr5_141411112_+ | UTR3 |
CAediting_437275 | chr5_141411308_+ | UTR3 |
CAediting_437276 | chr5_141411312_+ | UTR3 |
CAediting_437277 | chr5_141411343_+ | UTR3 |
CAediting_437278 | chr5_141411344_+ | UTR3 |
CAediting_437279 | chr5_141411362_+ | UTR3 |
CAediting_437280 | chr5_141411365_+ | UTR3 |
CAediting_437281 | chr5_141411383_+ | UTR3 |
CAediting_437282 | chr5_141411388_+ | UTR3 |
CAediting_437283 | chr5_141411427_+ | UTR3 |
CAediting_437284 | chr5_141411437_+ | UTR3 |
CAediting_437285 | chr5_141411450_+ | UTR3 |
CAediting_437286 | chr5_141411486_+ | UTR3 |
CAediting_437287 | chr5_141411517_+ | UTR3 |
CAediting_437288 | chr5_141411529_+ | UTR3 |
CAediting_437289 | chr5_141411566_+ | UTR3 |
CAediting_437290 | chr5_141411568_+ | UTR3 |
CAediting_437291 | chr5_141411627_+ | UTR3 |
CAediting_437292 | chr5_141411628_+ | UTR3 |
CAediting_437293 | chr5_141411633_+ | UTR3 |
CAediting_437294 | chr5_141411636_+ | UTR3 |
CAediting_437295 | chr5_141411644_+ | UTR3 |
CAediting_437296 | chr5_141411650_+ | UTR3 |
CAediting_437297 | chr5_141411676_+ | UTR3 |
CAediting_437298 | chr5_141411681_+ | UTR3 |
CAediting_437299 | chr5_141411695_+ | UTR3 |
CAediting_437300 | chr5_141411731_+ | UTR3 |
CAediting_437301 | chr5_141411738_+ | UTR3 |
CAediting_437302 | chr5_141411771_+ | UTR3 |
CAediting_437303 | chr5_141411791_+ | UTR3 |
CAediting_437304 | chr5_141411793_+ | UTR3 |
CAediting_437305 | chr5_141411794_+ | UTR3 |
CAediting_437306 | chr5_141411802_+ | UTR3 |
CAediting_437307 | chr5_141411811_+ | UTR3 |
CAediting_437308 | chr5_141411835_+ | UTR3 |
CAediting_437309 | chr5_141433238_+ | intronic |
CAediting_437310 | chr5_141433245_+ | intronic |
CAediting_437311 | chr5_141433273_+ | intronic |
CAediting_437312 | chr5_141433297_+ | intronic |
CAediting_437313 | chr5_141433323_+ | intronic |
CAediting_437314 | chr5_141433420_+ | intronic |
CAediting_437315 | chr5_141433424_+ | intronic |
CAediting_437316 | chr5_141433494_+ | intronic |
CAediting_437317 | chr5_141433495_+ | intronic |
CAediting_437318 | chr5_141433508_+ | intronic |
CAediting_437319 | chr5_141433717_+ | intronic |
CAediting_437320 | chr5_141433757_+ | intronic |
CAediting_437321 | chr5_141433758_+ | intronic |
CAediting_437322 | chr5_141433778_+ | intronic |
CAediting_437323 | chr5_141433787_+ | intronic |
CAediting_437324 | chr5_141437940_+ | intronic |
CAediting_437325 | chr5_141437993_+ | intronic |
CAediting_437326 | chr5_141438010_+ | intronic |
CAediting_437327 | chr5_141438015_+ | intronic |
CAediting_437328 | chr5_141439113_+ | intronic |
CAediting_437329 | chr5_141443285_+ | intronic |
CAediting_437330 | chr5_141443405_+ | intronic |
CAediting_437331 | chr5_141443471_+ | intronic |
CAediting_437332 | chr5_141446741_+ | intronic |
CAediting_437333 | chr5_141448011_+ | intronic |
CAediting_437334 | chr5_141448076_+ | intronic |
CAediting_437335 | chr5_141449329_+ | intronic |
CAediting_437336 | chr5_141450550_+ | intronic |
CAediting_437337 | chr5_141450673_+ | intronic |
CAediting_437338 | chr5_141450674_+ | intronic |
CAediting_437339 | chr5_141451010_+ | intronic |
CAediting_437340 | chr5_141451696_+ | intronic |
CAediting_437341 | chr5_141451698_+ | intronic |
CAediting_437342 | chr5_141451856_+ | intronic |
CAediting_437343 | chr5_141452672_+ | intronic |
CAediting_437344 | chr5_141453177_+ | intronic |
CAediting_437345 | chr5_141453183_+ | intronic |
CAediting_437346 | chr5_141453256_+ | intronic |
CAediting_437347 | chr5_141453386_+ | intronic |
CAediting_437348 | chr5_141453394_+ | intronic |
CAediting_437349 | chr5_141453406_+ | intronic |
CAediting_437350 | chr5_141454486_+ | intronic |
CAediting_437351 | chr5_141456096_+ | intronic |
CAediting_437352 | chr5_141458845_+ | intronic |
CAediting_437353 | chr5_141459957_+ | intronic |
CAediting_437354 | chr5_141459958_+ | intronic |
CAediting_437355 | chr5_141459998_+ | intronic |
CAediting_437356 | chr5_141461693_+ | intronic |
CAediting_437357 | chr5_141464010_+ | intronic |
CAediting_437358 | chr5_141464031_+ | intronic |
CAediting_437359 | chr5_141464100_+ | intronic |
CAediting_437360 | chr5_141464154_+ | intronic |
CAediting_437361 | chr5_141464167_+ | intronic |
CAediting_437362 | chr5_141464171_+ | intronic |
CAediting_437363 | chr5_141464190_+ | intronic |
CAediting_437364 | chr5_141464217_+ | intronic |
CAediting_437365 | chr5_141464755_+ | intronic |
CAediting_437366 | chr5_141464808_+ | intronic |
CAediting_437367 | chr5_141464813_+ | intronic |
CAediting_437368 | chr5_141464851_+ | intronic |
CAediting_437369 | chr5_141464856_+ | intronic |
CAediting_437370 | chr5_141464864_+ | intronic |
CAediting_437371 | chr5_141464868_+ | intronic |
CAediting_437372 | chr5_141464872_+ | intronic |
CAediting_437373 | chr5_141464878_+ | intronic |
CAediting_437374 | chr5_141464880_+ | intronic |
CAediting_437375 | chr5_141464900_+ | intronic |
CAediting_437376 | chr5_141464977_+ | intronic |
CAediting_437377 | chr5_141464994_+ | intronic |
CAediting_437378 | chr5_141465010_+ | intronic |
CAediting_437379 | chr5_141465868_+ | intronic |
CAediting_437380 | chr5_141466210_+ | intronic |
CAediting_437381 | chr5_141466283_+ | intronic |
CAediting_437382 | chr5_141466310_+ | intronic |
CAediting_437383 | chr5_141467122_+ | intronic |
CAediting_437384 | chr5_141467200_+ | intronic |
CAediting_437385 | chr5_141467287_+ | intronic |
CAediting_437386 | chr5_141467327_+ | intronic |
CAediting_437387 | chr5_141467336_+ | intronic |
CAediting_437388 | chr5_141467685_+ | intronic |
CAediting_437389 | chr5_141467712_+ | intronic |
CAediting_437390 | chr5_141467726_+ | intronic |
CAediting_437391 | chr5_141467731_+ | intronic |
CAediting_437392 | chr5_141467742_+ | intronic |
CAediting_437393 | chr5_141467762_+ | intronic |
CAediting_437394 | chr5_141467776_+ | intronic |
CAediting_437395 | chr5_141467784_+ | intronic |
CAediting_437396 | chr5_141467785_+ | intronic |
CAediting_437397 | chr5_141467788_+ | intronic |
CAediting_437398 | chr5_141467798_+ | intronic |
CAediting_437399 | chr5_141467800_+ | intronic |
CAediting_437400 | chr5_141467806_+ | intronic |
CAediting_437401 | chr5_141467811_+ | intronic |
CAediting_437402 | chr5_141467816_+ | intronic |
CAediting_437403 | chr5_141467856_+ | intronic |
CAediting_437404 | chr5_141467859_+ | intronic |
CAediting_437405 | chr5_141467879_+ | intronic |
CAediting_437406 | chr5_141467893_+ | intronic |
CAediting_437407 | chr5_141467894_+ | intronic |
CAediting_437408 | chr5_141467906_+ | intronic |
CAediting_437409 | chr5_141467911_+ | intronic |
CAediting_437410 | chr5_141467921_+ | intronic |
CAediting_437411 | chr5_141467927_+ | intronic |
CAediting_437412 | chr5_141467933_+ | intronic |
CAediting_437413 | chr5_141467936_+ | intronic |
CAediting_437414 | chr5_141467939_+ | intronic |
CAediting_437415 | chr5_141467951_+ | intronic |
CAediting_437416 | chr5_141468061_+ | intronic |
CAediting_437417 | chr5_141468063_+ | intronic |
CAediting_437418 | chr5_141468069_+ | intronic |
CAediting_437419 | chr5_141468070_+ | intronic |
CAediting_437420 | chr5_141468075_+ | intronic |
CAediting_437421 | chr5_141468124_+ | intronic |
CAediting_437422 | chr5_141468126_+ | intronic |
CAediting_437423 | chr5_141468147_+ | intronic |
CAediting_437424 | chr5_141468149_+ | intronic |
CAediting_437425 | chr5_141468163_+ | intronic |
CAediting_437426 | chr5_141468169_+ | intronic |
CAediting_437427 | chr5_141468172_+ | intronic |
CAediting_437428 | chr5_141468173_+ | intronic |
CAediting_437429 | chr5_141468174_+ | intronic |
CAediting_437430 | chr5_141468175_+ | intronic |
CAediting_437431 | chr5_141468186_+ | intronic |
CAediting_437432 | chr5_141468204_+ | intronic |
CAediting_437433 | chr5_141468205_+ | intronic |
CAediting_437434 | chr5_141468210_+ | intronic |
CAediting_437435 | chr5_141468224_+ | intronic |
CAediting_437436 | chr5_141468231_+ | intronic |
CAediting_437437 | chr5_141468237_+ | intronic |
CAediting_437438 | chr5_141468245_+ | intronic |
CAediting_437439 | chr5_141468246_+ | intronic |
CAediting_437440 | chr5_141468257_+ | intronic |
CAediting_437441 | chr5_141468270_+ | intronic |
CAediting_437442 | chr5_141468275_+ | intronic |
CAediting_437443 | chr5_141468280_+ | intronic |
CAediting_437444 | chr5_141468745_+ | ncRNA_intronic |
CAediting_437445 | chr5_141469021_+ | ncRNA_intronic |
CAediting_437446 | chr5_141469022_+ | ncRNA_intronic |
CAediting_437447 | chr5_141469043_+ | ncRNA_intronic |
CAediting_437448 | chr5_141469086_+ | ncRNA_intronic |
CAediting_437449 | chr5_141469094_+ | ncRNA_intronic |
CAediting_437450 | chr5_141469118_+ | ncRNA_intronic |
CAediting_437451 | chr5_141469129_+ | ncRNA_intronic |
CAediting_437452 | chr5_141469133_+ | ncRNA_intronic |
CAediting_437453 | chr5_141469147_+ | ncRNA_intronic |
CAediting_437454 | chr5_141469155_+ | ncRNA_intronic |
CAediting_437455 | chr5_141469165_+ | ncRNA_intronic |
CAediting_437456 | chr5_141469182_+ | ncRNA_intronic |
CAediting_437457 | chr5_141469183_+ | ncRNA_intronic |
CAediting_437458 | chr5_141469196_+ | ncRNA_intronic |
CAediting_437459 | chr5_141469206_+ | ncRNA_intronic |
CAediting_437460 | chr5_141469232_+ | ncRNA_intronic |
CAediting_437461 | chr5_141469257_+ | ncRNA_intronic |
CAediting_437462 | chr5_141469264_+ | ncRNA_intronic |
CAediting_437463 | chr5_141469265_+ | ncRNA_intronic |
CAediting_437464 | chr5_141469313_+ | ncRNA_intronic |
CAediting_437465 | chr5_141469321_+ | ncRNA_intronic |
CAediting_437466 | chr5_141469322_+ | ncRNA_intronic |
CAediting_437467 | chr5_141469364_+ | ncRNA_intronic |
CAediting_437468 | chr5_141469454_+ | ncRNA_intronic |
CAediting_437469 | chr5_141469671_+ | ncRNA_intronic |
CAediting_437470 | chr5_141469691_+ | ncRNA_intronic |
CAediting_437471 | chr5_141469710_+ | ncRNA_intronic |
CAediting_437472 | chr5_141469713_+ | ncRNA_intronic |
CAediting_437473 | chr5_141469724_+ | ncRNA_intronic |
CAediting_437474 | chr5_141469726_+ | ncRNA_intronic |
CAediting_437475 | chr5_141469727_+ | ncRNA_intronic |
CAediting_437476 | chr5_141469728_+ | ncRNA_intronic |
CAediting_437477 | chr5_141469860_+ | ncRNA_intronic |
CAediting_437478 | chr5_141469893_+ | ncRNA_intronic |
CAediting_437479 | chr5_141469906_+ | ncRNA_intronic |
CAediting_437480 | chr5_141469921_+ | ncRNA_intronic |
CAediting_437481 | chr5_141470009_+ | ncRNA_intronic |
CAediting_437482 | chr5_141470050_+ | ncRNA_intronic |
CAediting_437483 | chr5_141470084_+ | ncRNA_intronic |
CAediting_437484 | chr5_141470092_+ | ncRNA_intronic |
CAediting_437485 | chr5_141470108_+ | ncRNA_intronic |
CAediting_437486 | chr5_141470765_+ | ncRNA_intronic |
CAediting_437487 | chr5_141470788_+ | ncRNA_intronic |
CAediting_437488 | chr5_141470792_+ | ncRNA_intronic |
CAediting_437489 | chr5_141470800_+ | ncRNA_intronic |
CAediting_437490 | chr5_141470821_+ | ncRNA_intronic |
CAediting_437491 | chr5_141470830_+ | ncRNA_intronic |
CAediting_437492 | chr5_141470937_+ | ncRNA_intronic |
CAediting_437493 | chr5_141470951_+ | ncRNA_intronic |
CAediting_437494 | chr5_141471150_+ | ncRNA_intronic |
CAediting_437495 | chr5_141471234_+ | ncRNA_intronic |
CAediting_437496 | chr5_141471251_+ | ncRNA_intronic |
CAediting_437497 | chr5_141471294_+ | ncRNA_intronic |
CAediting_437498 | chr5_141471325_+ | ncRNA_exonic |
CAediting_437499 | chr5_141472364_+ | intronic |
CAediting_437500 | chr5_141472387_+ | intronic |
CAediting_437501 | chr5_141472461_+ | intronic |
CAediting_437502 | chr5_141472465_+ | intronic |
CAediting_437503 | chr5_141472724_+ | intronic |
CAediting_437504 | chr5_141472730_+ | intronic |
CAediting_437505 | chr5_141472731_+ | intronic |
CAediting_437506 | chr5_141472784_+ | intronic |
CAediting_437507 | chr5_141472785_+ | intronic |
CAediting_437508 | chr5_141472796_+ | intronic |
CAediting_437509 | chr5_141472809_+ | intronic |
CAediting_437510 | chr5_141472822_+ | intronic |
CAediting_437511 | chr5_141472825_+ | intronic |
CAediting_437512 | chr5_141472826_+ | intronic |
CAediting_437513 | chr5_141472829_+ | intronic |
CAediting_437514 | chr5_141472831_+ | intronic |
CAediting_437515 | chr5_141472839_+ | intronic |
CAediting_437516 | chr5_141472892_+ | intronic |
CAediting_437517 | chr5_141472898_+ | intronic |
CAediting_437518 | chr5_141472907_+ | intronic |
CAediting_437519 | chr5_141472911_+ | intronic |
CAediting_437520 | chr5_141472912_+ | intronic |
CAediting_437521 | chr5_141472935_+ | intronic |
CAediting_437522 | chr5_141472936_+ | intronic |
CAediting_437523 | chr5_141480318_+ | ncRNA_intronic |
CAediting_437524 | chr5_141480354_+ | ncRNA_intronic |
CAediting_437525 | chr5_141480378_+ | ncRNA_intronic |
CAediting_437526 | chr5_141480650_+ | ncRNA_intronic |
CAediting_437527 | chr5_141480655_+ | ncRNA_intronic |
CAediting_437528 | chr5_141480656_+ | ncRNA_intronic |
CAediting_437529 | chr5_141480858_+ | ncRNA_intronic |
CAediting_437530 | chr5_141480861_+ | ncRNA_intronic |
CAediting_437531 | chr5_141480880_+ | ncRNA_intronic |
CAediting_437532 | chr5_141480906_+ | ncRNA_intronic |
CAediting_437533 | chr5_141480918_+ | ncRNA_intronic |
CAediting_437534 | chr5_141480930_+ | ncRNA_intronic |
CAediting_437535 | chr5_141480983_+ | ncRNA_intronic |
CAediting_437536 | chr5_141480993_+ | ncRNA_intronic |
CAediting_437537 | chr5_141481040_+ | ncRNA_intronic |
CAediting_437538 | chr5_141481075_+ | ncRNA_intronic |
CAediting_437539 | chr5_141481590_+ | ncRNA_intronic |
CAediting_437540 | chr5_141481964_+ | ncRNA_intronic |
CAediting_437541 | chr5_141481974_+ | ncRNA_intronic |
CAediting_437542 | chr5_141482034_+ | ncRNA_intronic |
CAediting_437543 | chr5_141483067_+ | ncRNA_intronic |
CAediting_437544 | chr5_141503492_+ | ncRNA_intronic |
CAediting_437545 | chr5_141503493_+ | ncRNA_intronic |
CAediting_437546 | chr5_141503501_+ | ncRNA_intronic |
CAediting_437547 | chr5_141503505_+ | ncRNA_intronic |
CAediting_437548 | chr5_141504978_+ | ncRNA_intronic |
CAediting_437549 | chr5_141504986_+ | ncRNA_intronic |
Repat-regional RNA editing(s). |
CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_437155 | chr5_141333737_+ | SINE | Alu | FRAM |
CAediting_437156 | chr5_141333761_+ | SINE | Alu | FRAM |
CAediting_437157 | chr5_141333787_+ | SINE | Alu | FRAM |
CAediting_437158 | chr5_141333799_+ | SINE | Alu | FRAM |
CAediting_437159 | chr5_141334362_+ | SINE | Alu | AluJb |
CAediting_437160 | chr5_141334370_+ | SINE | Alu | AluJb |
CAediting_437161 | chr5_141334376_+ | SINE | Alu | AluJb |
CAediting_437162 | chr5_141334377_+ | SINE | Alu | AluJb |
CAediting_437163 | chr5_141334380_+ | SINE | Alu | AluJb |
CAediting_437164 | chr5_141334387_+ | SINE | Alu | AluJb |
CAediting_437165 | chr5_141334401_+ | SINE | Alu | AluJb |
CAediting_437166 | chr5_141334535_+ | SINE | Alu | AluJb |
CAediting_437167 | chr5_141334552_+ | SINE | Alu | AluJb |
CAediting_437168 | chr5_141347299_+ | SINE | Alu | AluJb |
CAediting_437169 | chr5_141347375_+ | SINE | Alu | AluJb |
CAediting_437170 | chr5_141347540_+ | SINE | Alu | AluSx1 |
CAediting_437171 | chr5_141349169_+ | SINE | Alu | AluSx1 |
CAediting_437172 | chr5_141349170_+ | SINE | Alu | AluSx1 |
CAediting_437173 | chr5_141349251_+ | SINE | Alu | AluSx1 |
CAediting_437174 | chr5_141349284_+ | SINE | Alu | AluSx1 |
CAediting_437175 | chr5_141349291_+ | SINE | Alu | AluSx1 |
CAediting_437176 | chr5_141352761_+ | SINE | Alu | AluSz |
CAediting_437177 | chr5_141352780_+ | SINE | Alu | AluSz |
CAediting_437178 | chr5_141352794_+ | SINE | Alu | AluSz |
CAediting_437179 | chr5_141352834_+ | SINE | Alu | AluSz |
CAediting_437180 | chr5_141352835_+ | SINE | Alu | AluSz |
CAediting_437181 | chr5_141352885_+ | SINE | Alu | AluSz |
CAediting_437182 | chr5_141352890_+ | SINE | Alu | AluSz |
CAediting_437183 | chr5_141352892_+ | SINE | Alu | AluSz |
CAediting_437184 | chr5_141352894_+ | SINE | Alu | AluSz |
CAediting_437185 | chr5_141352908_+ | SINE | Alu | AluSz |
CAediting_437186 | chr5_141352916_+ | SINE | Alu | AluSz |
CAediting_437187 | chr5_141352937_+ | SINE | Alu | AluSz |
CAediting_437188 | chr5_141367360_+ | SINE | Alu | AluY |
CAediting_437189 | chr5_141367481_+ | SINE | Alu | AluY |
CAediting_437190 | chr5_141367519_+ | SINE | Alu | AluY |
CAediting_437191 | chr5_141373394_+ | SINE | Alu | AluJr |
CAediting_437192 | chr5_141373402_+ | SINE | Alu | AluJr |
CAediting_437193 | chr5_141373465_+ | SINE | Alu | AluJr |
CAediting_437194 | chr5_141376767_+ | SINE | Alu | AluYb9 |
CAediting_437195 | chr5_141376961_+ | SINE | Alu | AluYb9 |
CAediting_437196 | chr5_141376970_+ | SINE | Alu | AluYb9 |
CAediting_437197 | chr5_141377342_+ | SINE | Alu | AluJo |
CAediting_437198 | chr5_141377351_+ | SINE | Alu | AluJo |
CAediting_437199 | chr5_141377364_+ | SINE | Alu | AluJo |
CAediting_437200 | chr5_141377377_+ | SINE | Alu | AluJo |
CAediting_437201 | chr5_141377380_+ | SINE | Alu | AluJo |
CAediting_437202 | chr5_141377431_+ | SINE | Alu | AluJo |
CAediting_437203 | chr5_141377434_+ | SINE | Alu | AluJo |
CAediting_437204 | chr5_141377435_+ | SINE | Alu | AluJo |
CAediting_437205 | chr5_141377437_+ | SINE | Alu | AluJo |
CAediting_437206 | chr5_141377438_+ | SINE | Alu | AluJo |
CAediting_437207 | chr5_141377442_+ | SINE | Alu | AluJo |
CAediting_437208 | chr5_141377443_+ | SINE | Alu | AluJo |
CAediting_437209 | chr5_141377444_+ | SINE | Alu | AluJo |
CAediting_437210 | chr5_141377445_+ | SINE | Alu | AluJo |
CAediting_437211 | chr5_141377446_+ | SINE | Alu | AluJo |
CAediting_437212 | chr5_141377450_+ | SINE | Alu | AluJo |
CAediting_437213 | chr5_141377454_+ | SINE | Alu | AluJo |
CAediting_437214 | chr5_141377475_+ | SINE | Alu | AluJo |
CAediting_437215 | chr5_141377481_+ | SINE | Alu | AluJo |
CAediting_437216 | chr5_141377490_+ | SINE | Alu | AluJo |
CAediting_437217 | chr5_141377493_+ | SINE | Alu | AluJo |
CAediting_437218 | chr5_141377505_+ | SINE | Alu | AluJo |
CAediting_437219 | chr5_141377515_+ | SINE | Alu | AluJo |
CAediting_437220 | chr5_141377516_+ | SINE | Alu | AluJo |
CAediting_437221 | chr5_141377521_+ | SINE | Alu | AluJo |
CAediting_437222 | chr5_141378269_+ | SINE | Alu | AluSg |
CAediting_437223 | chr5_141378270_+ | SINE | Alu | AluSg |
CAediting_437224 | chr5_141378276_+ | SINE | Alu | AluSg |
CAediting_437225 | chr5_141378308_+ | SINE | Alu | AluSg |
CAediting_437226 | chr5_141378309_+ | SINE | Alu | AluSg |
CAediting_437227 | chr5_141378313_+ | SINE | Alu | AluSg |
CAediting_437228 | chr5_141378327_+ | SINE | Alu | AluSg |
CAediting_437229 | chr5_141378333_+ | SINE | Alu | AluSg |
CAediting_437230 | chr5_141378336_+ | SINE | Alu | AluSg |
CAediting_437231 | chr5_141378337_+ | SINE | Alu | AluSg |
CAediting_437232 | chr5_141378347_+ | SINE | Alu | AluSg |
CAediting_437233 | chr5_141378358_+ | SINE | Alu | AluSg |
CAediting_437234 | chr5_141378361_+ | SINE | Alu | AluSg |
CAediting_437235 | chr5_141378365_+ | SINE | Alu | AluSg |
CAediting_437236 | chr5_141378367_+ | SINE | Alu | AluSg |
CAediting_437237 | chr5_141378370_+ | SINE | Alu | AluSg |
CAediting_437238 | chr5_141378372_+ | SINE | Alu | AluSg |
CAediting_437239 | chr5_141378376_+ | SINE | Alu | AluSg |
CAediting_437240 | chr5_141378380_+ | SINE | Alu | AluSg |
CAediting_437241 | chr5_141378402_+ | SINE | Alu | AluSg |
CAediting_437242 | chr5_141378403_+ | SINE | Alu | AluSg |
CAediting_437243 | chr5_141378412_+ | SINE | Alu | AluSg |
CAediting_437244 | chr5_141378429_+ | SINE | Alu | AluSg |
CAediting_437245 | chr5_141378451_+ | SINE | Alu | AluSg |
CAediting_437246 | chr5_141378455_+ | SINE | Alu | AluSg |
CAediting_437247 | chr5_141378505_+ | SINE | Alu | AluSg |
CAediting_437248 | chr5_141380039_+ | SINE | Alu | AluSz |
CAediting_437249 | chr5_141381886_+ | SINE | Alu | AluSp |
CAediting_437250 | chr5_141391412_+ | SINE | Alu | AluJo |
CAediting_437251 | chr5_141391477_+ | SINE | Alu | AluJo |
CAediting_437252 | chr5_141401244_+ | SINE | Alu | AluSq2 |
CAediting_437253 | chr5_141401262_+ | SINE | Alu | AluSq2 |
CAediting_437254 | chr5_141401263_+ | SINE | Alu | AluSq2 |
CAediting_437255 | chr5_141401294_+ | SINE | Alu | AluSq2 |
CAediting_437256 | chr5_141401297_+ | SINE | Alu | AluSq2 |
CAediting_437257 | chr5_141405443_+ | SINE | Alu | AluSz |
CAediting_437258 | chr5_141405514_+ | SINE | Alu | AluSz |
CAediting_437259 | chr5_141405520_+ | SINE | Alu | AluSz |
CAediting_437260 | chr5_141405706_+ | SINE | Alu | AluSz |
CAediting_437261 | chr5_141405739_+ | SINE | Alu | AluSz |
CAediting_437262 | chr5_141405740_+ | SINE | Alu | AluSz |
CAediting_437263 | chr5_141406256_+ | SINE | Alu | AluJr |
CAediting_437264 | chr5_141410934_+ | SINE | Alu | AluSx3 |
CAediting_437265 | chr5_141410954_+ | SINE | Alu | AluSx3 |
CAediting_437266 | chr5_141410971_+ | SINE | Alu | AluSx3 |
CAediting_437267 | chr5_141410979_+ | SINE | Alu | AluSx3 |
CAediting_437268 | chr5_141410980_+ | SINE | Alu | AluSx3 |
CAediting_437269 | chr5_141410983_+ | SINE | Alu | AluSx3 |
CAediting_437270 | chr5_141411032_+ | SINE | Alu | AluSx3 |
CAediting_437271 | chr5_141411035_+ | SINE | Alu | AluSx3 |
CAediting_437272 | chr5_141411052_+ | SINE | Alu | AluSx3 |
CAediting_437273 | chr5_141411111_+ | SINE | Alu | AluSx3 |
CAediting_437274 | chr5_141411112_+ | SINE | Alu | AluSx3 |
CAediting_437275 | chr5_141411308_+ | SINE | Alu | AluJb |
CAediting_437276 | chr5_141411312_+ | SINE | Alu | AluJb |
CAediting_437277 | chr5_141411343_+ | SINE | Alu | AluJb |
CAediting_437278 | chr5_141411344_+ | SINE | Alu | AluJb |
CAediting_437279 | chr5_141411362_+ | SINE | Alu | AluJb |
CAediting_437280 | chr5_141411365_+ | SINE | Alu | AluJb |
CAediting_437281 | chr5_141411383_+ | SINE | Alu | AluJb |
CAediting_437282 | chr5_141411388_+ | SINE | Alu | AluJb |
CAediting_437283 | chr5_141411427_+ | SINE | Alu | AluJb |
CAediting_437284 | chr5_141411437_+ | SINE | Alu | AluJb |
CAediting_437285 | chr5_141411450_+ | SINE | Alu | AluJb |
CAediting_437286 | chr5_141411486_+ | SINE | Alu | AluJb |
CAediting_437287 | chr5_141411517_+ | SINE | Alu | AluJb |
CAediting_437288 | chr5_141411529_+ | SINE | Alu | AluJb |
CAediting_437289 | chr5_141411566_+ | SINE | Alu | AluJb |
CAediting_437290 | chr5_141411568_+ | SINE | Alu | AluJb |
CAediting_437291 | chr5_141411627_+ | SINE | Alu | AluJr |
CAediting_437292 | chr5_141411628_+ | SINE | Alu | AluJr |
CAediting_437293 | chr5_141411633_+ | SINE | Alu | AluJr |
CAediting_437294 | chr5_141411636_+ | SINE | Alu | AluJr |
CAediting_437295 | chr5_141411644_+ | SINE | Alu | AluJr |
CAediting_437296 | chr5_141411650_+ | SINE | Alu | AluJr |
CAediting_437297 | chr5_141411676_+ | SINE | Alu | AluJr |
CAediting_437298 | chr5_141411681_+ | SINE | Alu | AluJr |
CAediting_437299 | chr5_141411695_+ | SINE | Alu | AluJr |
CAediting_437300 | chr5_141411731_+ | SINE | Alu | AluJr |
CAediting_437301 | chr5_141411738_+ | SINE | Alu | AluJr |
CAediting_437302 | chr5_141411771_+ | SINE | Alu | AluJr |
CAediting_437303 | chr5_141411791_+ | SINE | Alu | AluJr |
CAediting_437304 | chr5_141411793_+ | SINE | Alu | AluJr |
CAediting_437305 | chr5_141411794_+ | SINE | Alu | AluJr |
CAediting_437306 | chr5_141411802_+ | SINE | Alu | AluJr |
CAediting_437307 | chr5_141411811_+ | SINE | Alu | AluJr |
CAediting_437308 | chr5_141411835_+ | SINE | Alu | AluJr |
CAediting_437309 | chr5_141433238_+ | SINE | Alu | AluJo |
CAediting_437310 | chr5_141433245_+ | SINE | Alu | AluJo |
CAediting_437311 | chr5_141433273_+ | SINE | Alu | AluJo |
CAediting_437312 | chr5_141433297_+ | SINE | Alu | AluJo |
CAediting_437313 | chr5_141433323_+ | SINE | Alu | AluJo |
CAediting_437314 | chr5_141433420_+ | SINE | Alu | AluJo |
CAediting_437315 | chr5_141433424_+ | SINE | Alu | AluJo |
CAediting_437316 | chr5_141433494_+ | SINE | Alu | AluJo |
CAediting_437317 | chr5_141433495_+ | SINE | Alu | AluJo |
CAediting_437318 | chr5_141433508_+ | SINE | Alu | AluJo |
CAediting_437319 | chr5_141433717_+ | SINE | Alu | AluSp |
CAediting_437320 | chr5_141433757_+ | SINE | Alu | AluSp |
CAediting_437321 | chr5_141433758_+ | SINE | Alu | AluSp |
CAediting_437322 | chr5_141433778_+ | SINE | Alu | AluSp |
CAediting_437323 | chr5_141433787_+ | SINE | Alu | AluSp |
CAediting_437324 | chr5_141437940_+ | SINE | Alu | AluSc |
CAediting_437325 | chr5_141437993_+ | SINE | Alu | AluSc |
CAediting_437326 | chr5_141438010_+ | SINE | Alu | AluSc |
CAediting_437327 | chr5_141438015_+ | SINE | Alu | AluSc |
CAediting_437328 | chr5_141439113_+ | SINE | Alu | AluSx1 |
CAediting_437329 | chr5_141443285_+ | SINE | Alu | AluJb |
CAediting_437330 | chr5_141443405_+ | SINE | Alu | AluJb |
CAediting_437331 | chr5_141443471_+ | SINE | Alu | AluJb |
CAediting_437332 | chr5_141446741_+ | SINE | Alu | AluSx4 |
CAediting_437333 | chr5_141448011_+ | SINE | Alu | AluSq2 |
CAediting_437334 | chr5_141448076_+ | SINE | Alu | AluSq2 |
CAediting_437335 | chr5_141449329_+ | SINE | Alu | AluSz6 |
CAediting_437336 | chr5_141450550_+ | SINE | Alu | AluSq2 |
CAediting_437337 | chr5_141450673_+ | SINE | Alu | AluSq2 |
CAediting_437338 | chr5_141450674_+ | SINE | Alu | AluSq2 |
CAediting_437339 | chr5_141451010_+ | SINE | Alu | AluSx3 |
CAediting_437340 | chr5_141451696_+ | SINE | Alu | AluSz6 |
CAediting_437341 | chr5_141451698_+ | SINE | Alu | AluSz6 |
CAediting_437342 | chr5_141451856_+ | SINE | Alu | AluSz6 |
CAediting_437343 | chr5_141452672_+ | SINE | Alu | AluJo |
CAediting_437344 | chr5_141453177_+ | SINE | Alu | AluJb |
CAediting_437345 | chr5_141453183_+ | SINE | Alu | AluJb |
CAediting_437346 | chr5_141453256_+ | SINE | Alu | AluJb |
CAediting_437347 | chr5_141453386_+ | SINE | Alu | AluJb |
CAediting_437348 | chr5_141453394_+ | SINE | Alu | AluJb |
CAediting_437349 | chr5_141453406_+ | SINE | Alu | AluJb |
CAediting_437350 | chr5_141454486_+ | SINE | Alu | AluSp |
CAediting_437351 | chr5_141456096_+ | SINE | Alu | AluY |
CAediting_437352 | chr5_141458845_+ | SINE | Alu | AluJr |
CAediting_437353 | chr5_141459957_+ | SINE | Alu | AluSx1 |
CAediting_437354 | chr5_141459958_+ | SINE | Alu | AluSx1 |
CAediting_437355 | chr5_141459998_+ | SINE | Alu | AluSx1 |
CAediting_437356 | chr5_141461693_+ | SINE | Alu | AluSq |
CAediting_437357 | chr5_141464010_+ | SINE | Alu | AluSx1 |
CAediting_437358 | chr5_141464031_+ | SINE | Alu | AluSx1 |
CAediting_437359 | chr5_141464100_+ | SINE | Alu | AluSx1 |
CAediting_437360 | chr5_141464154_+ | SINE | Alu | AluSx1 |
CAediting_437361 | chr5_141464167_+ | SINE | Alu | AluSx1 |
CAediting_437362 | chr5_141464171_+ | SINE | Alu | AluSx1 |
CAediting_437363 | chr5_141464190_+ | SINE | Alu | AluSx1 |
CAediting_437364 | chr5_141464217_+ | SINE | Alu | AluSx1 |
CAediting_437365 | chr5_141464755_+ | SINE | Alu | AluJr4 |
CAediting_437366 | chr5_141464808_+ | SINE | Alu | AluJr4 |
CAediting_437367 | chr5_141464813_+ | SINE | Alu | AluJr4 |
CAediting_437368 | chr5_141464851_+ | SINE | Alu | AluJr4 |
CAediting_437369 | chr5_141464856_+ | SINE | Alu | AluJr4 |
CAediting_437370 | chr5_141464864_+ | SINE | Alu | AluJr4 |
CAediting_437371 | chr5_141464868_+ | SINE | Alu | AluJr4 |
CAediting_437372 | chr5_141464872_+ | SINE | Alu | AluJr4 |
CAediting_437373 | chr5_141464878_+ | SINE | Alu | AluJr4 |
CAediting_437374 | chr5_141464880_+ | SINE | Alu | AluJr4 |
CAediting_437375 | chr5_141464900_+ | SINE | Alu | AluJr4 |
CAediting_437376 | chr5_141464977_+ | SINE | Alu | AluJr4 |
CAediting_437377 | chr5_141464994_+ | SINE | Alu | AluJr4 |
CAediting_437378 | chr5_141465010_+ | SINE | Alu | AluJr4 |
CAediting_437379 | chr5_141465868_+ | SINE | Alu | AluY |
CAediting_437380 | chr5_141466210_+ | SINE | Alu | AluJb |
CAediting_437381 | chr5_141466283_+ | SINE | Alu | AluJb |
CAediting_437382 | chr5_141466310_+ | SINE | Alu | AluJb |
CAediting_437383 | chr5_141467122_+ | SINE | Alu | AluSz |
CAediting_437384 | chr5_141467200_+ | SINE | Alu | AluSz |
CAediting_437385 | chr5_141467287_+ | SINE | Alu | AluSz |
CAediting_437386 | chr5_141467327_+ | SINE | Alu | AluSz |
CAediting_437387 | chr5_141467336_+ | SINE | Alu | AluSz |
CAediting_437388 | chr5_141467685_+ | SINE | Alu | AluJb |
CAediting_437389 | chr5_141467712_+ | SINE | Alu | AluJb |
CAediting_437390 | chr5_141467726_+ | SINE | Alu | AluJb |
CAediting_437391 | chr5_141467731_+ | SINE | Alu | AluJb |
CAediting_437392 | chr5_141467742_+ | SINE | Alu | AluJb |
CAediting_437393 | chr5_141467762_+ | SINE | Alu | AluJb |
CAediting_437394 | chr5_141467776_+ | SINE | Alu | AluJb |
CAediting_437395 | chr5_141467784_+ | SINE | Alu | AluJb |
CAediting_437396 | chr5_141467785_+ | SINE | Alu | AluJb |
CAediting_437397 | chr5_141467788_+ | SINE | Alu | AluJb |
CAediting_437398 | chr5_141467798_+ | SINE | Alu | AluJb |
CAediting_437399 | chr5_141467800_+ | SINE | Alu | AluJb |
CAediting_437400 | chr5_141467806_+ | SINE | Alu | AluJb |
CAediting_437401 | chr5_141467811_+ | SINE | Alu | AluJb |
CAediting_437402 | chr5_141467816_+ | SINE | Alu | AluJb |
CAediting_437403 | chr5_141467856_+ | SINE | Alu | AluJb |
CAediting_437404 | chr5_141467859_+ | SINE | Alu | AluJb |
CAediting_437405 | chr5_141467879_+ | SINE | Alu | AluJb |
CAediting_437406 | chr5_141467893_+ | SINE | Alu | AluJb |
CAediting_437407 | chr5_141467894_+ | SINE | Alu | AluJb |
CAediting_437408 | chr5_141467906_+ | SINE | Alu | AluJb |
CAediting_437409 | chr5_141467911_+ | SINE | Alu | AluJb |
CAediting_437410 | chr5_141467921_+ | SINE | Alu | AluJb |
CAediting_437411 | chr5_141467927_+ | SINE | Alu | AluJb |
CAediting_437412 | chr5_141467933_+ | SINE | Alu | AluJb |
CAediting_437413 | chr5_141467936_+ | SINE | Alu | AluJb |
CAediting_437414 | chr5_141467939_+ | SINE | Alu | AluJb |
CAediting_437415 | chr5_141467951_+ | SINE | Alu | AluJb |
CAediting_437416 | chr5_141468061_+ | SINE | Alu | AluSq2 |
CAediting_437417 | chr5_141468063_+ | SINE | Alu | AluSq2 |
CAediting_437418 | chr5_141468069_+ | SINE | Alu | AluSq2 |
CAediting_437419 | chr5_141468070_+ | SINE | Alu | AluSq2 |
CAediting_437420 | chr5_141468075_+ | SINE | Alu | AluSq2 |
CAediting_437421 | chr5_141468124_+ | SINE | Alu | AluSq2 |
CAediting_437422 | chr5_141468126_+ | SINE | Alu | AluSq2 |
CAediting_437423 | chr5_141468147_+ | SINE | Alu | AluSq2 |
CAediting_437424 | chr5_141468149_+ | SINE | Alu | AluSq2 |
CAediting_437425 | chr5_141468163_+ | SINE | Alu | AluSq2 |
CAediting_437426 | chr5_141468169_+ | SINE | Alu | AluSq2 |
CAediting_437427 | chr5_141468172_+ | SINE | Alu | AluSq2 |
CAediting_437428 | chr5_141468173_+ | SINE | Alu | AluSq2 |
CAediting_437429 | chr5_141468174_+ | SINE | Alu | AluSq2 |
CAediting_437430 | chr5_141468175_+ | SINE | Alu | AluSq2 |
CAediting_437431 | chr5_141468186_+ | SINE | Alu | AluSq2 |
CAediting_437432 | chr5_141468204_+ | SINE | Alu | AluSq2 |
CAediting_437433 | chr5_141468205_+ | SINE | Alu | AluSq2 |
CAediting_437434 | chr5_141468210_+ | SINE | Alu | AluSq2 |
CAediting_437435 | chr5_141468224_+ | SINE | Alu | AluSq2 |
CAediting_437436 | chr5_141468231_+ | SINE | Alu | AluSq2 |
CAediting_437437 | chr5_141468237_+ | SINE | Alu | AluSq2 |
CAediting_437438 | chr5_141468245_+ | SINE | Alu | AluSq2 |
CAediting_437439 | chr5_141468246_+ | SINE | Alu | AluSq2 |
CAediting_437440 | chr5_141468257_+ | SINE | Alu | AluSq2 |
CAediting_437441 | chr5_141468270_+ | SINE | Alu | AluSq2 |
CAediting_437442 | chr5_141468275_+ | SINE | Alu | AluSq2 |
CAediting_437443 | chr5_141468280_+ | SINE | Alu | AluSq2 |
CAediting_437444 | chr5_141468745_+ | SINE | Alu | AluY |
CAediting_437445 | chr5_141469021_+ | SINE | Alu | AluJo |
CAediting_437446 | chr5_141469022_+ | SINE | Alu | AluJo |
CAediting_437447 | chr5_141469043_+ | SINE | Alu | AluJo |
CAediting_437448 | chr5_141469086_+ | SINE | Alu | AluJo |
CAediting_437449 | chr5_141469094_+ | SINE | Alu | AluJo |
CAediting_437450 | chr5_141469118_+ | SINE | Alu | AluJo |
CAediting_437451 | chr5_141469129_+ | SINE | Alu | AluJo |
CAediting_437452 | chr5_141469133_+ | SINE | Alu | AluJo |
CAediting_437453 | chr5_141469147_+ | SINE | Alu | AluJo |
CAediting_437454 | chr5_141469155_+ | SINE | Alu | AluJo |
CAediting_437455 | chr5_141469165_+ | SINE | Alu | AluJo |
CAediting_437456 | chr5_141469182_+ | SINE | Alu | AluJo |
CAediting_437457 | chr5_141469183_+ | SINE | Alu | AluJo |
CAediting_437458 | chr5_141469196_+ | SINE | Alu | AluJo |
CAediting_437459 | chr5_141469206_+ | SINE | Alu | AluJo |
CAediting_437460 | chr5_141469232_+ | SINE | Alu | AluJo |
CAediting_437461 | chr5_141469257_+ | SINE | Alu | AluJo |
CAediting_437462 | chr5_141469264_+ | SINE | Alu | AluJo |
CAediting_437463 | chr5_141469265_+ | SINE | Alu | AluJo |
CAediting_437464 | chr5_141469313_+ | SINE | Alu | AluSc |
CAediting_437465 | chr5_141469321_+ | SINE | Alu | AluSc |
CAediting_437466 | chr5_141469322_+ | SINE | Alu | AluSc |
CAediting_437467 | chr5_141469364_+ | SINE | Alu | AluSc |
CAediting_437468 | chr5_141469454_+ | SINE | Alu | AluSc |
CAediting_437469 | chr5_141469671_+ | LINE | L1 | L1MC5a |
CAediting_437470 | chr5_141469691_+ | LINE | L1 | L1MC5a |
CAediting_437471 | chr5_141469710_+ | LINE | L1 | L1MC5a |
CAediting_437472 | chr5_141469713_+ | LINE | L1 | L1MC5a |
CAediting_437473 | chr5_141469724_+ | LINE | L1 | L1MC5a |
CAediting_437474 | chr5_141469726_+ | LINE | L1 | L1MC5a |
CAediting_437475 | chr5_141469727_+ | LINE | L1 | L1MC5a |
CAediting_437476 | chr5_141469728_+ | LINE | L1 | L1MC5a |
CAediting_437477 | chr5_141469860_+ | SINE | Alu | AluSx |
CAediting_437478 | chr5_141469893_+ | SINE | Alu | AluSx |
CAediting_437479 | chr5_141469906_+ | SINE | Alu | AluSx |
CAediting_437480 | chr5_141469921_+ | SINE | Alu | AluSx |
CAediting_437481 | chr5_141470009_+ | SINE | Alu | AluSx |
CAediting_437482 | chr5_141470050_+ | SINE | Alu | AluSx |
CAediting_437483 | chr5_141470084_+ | SINE | Alu | AluSx |
CAediting_437484 | chr5_141470092_+ | SINE | Alu | AluSx |
CAediting_437485 | chr5_141470108_+ | SINE | Alu | AluSx |
CAediting_437486 | chr5_141470765_+ | SINE | Alu | AluJr |
CAediting_437487 | chr5_141470788_+ | SINE | Alu | AluJr |
CAediting_437488 | chr5_141470792_+ | SINE | Alu | AluJr |
CAediting_437489 | chr5_141470800_+ | SINE | Alu | AluJr |
CAediting_437490 | chr5_141470821_+ | SINE | Alu | AluJr |
CAediting_437491 | chr5_141470830_+ | SINE | Alu | AluJr |
CAediting_437492 | chr5_141470937_+ | SINE | Alu | AluJr |
CAediting_437493 | chr5_141470951_+ | SINE | Alu | AluJr |
CAediting_437494 | chr5_141471150_+ | SINE | Alu | AluSx1 |
CAediting_437495 | chr5_141471234_+ | SINE | Alu | AluSx1 |
CAediting_437496 | chr5_141471251_+ | SINE | Alu | AluSx1 |
CAediting_437497 | chr5_141471294_+ | SINE | Alu | AluSx1 |
CAediting_437498 | chr5_141471325_+ | SINE | Alu | AluSx1 |
CAediting_437499 | chr5_141472364_+ | SINE | Alu | AluSc8 |
CAediting_437500 | chr5_141472387_+ | SINE | Alu | AluSc8 |
CAediting_437501 | chr5_141472461_+ | SINE | Alu | AluSc8 |
CAediting_437502 | chr5_141472465_+ | SINE | Alu | AluSc8 |
CAediting_437503 | chr5_141472724_+ | SINE | Alu | AluSp |
CAediting_437504 | chr5_141472730_+ | SINE | Alu | AluSp |
CAediting_437505 | chr5_141472731_+ | SINE | Alu | AluSp |
CAediting_437506 | chr5_141472784_+ | SINE | Alu | AluSp |
CAediting_437507 | chr5_141472785_+ | SINE | Alu | AluSp |
CAediting_437508 | chr5_141472796_+ | SINE | Alu | AluSp |
CAediting_437509 | chr5_141472809_+ | SINE | Alu | AluSp |
CAediting_437510 | chr5_141472822_+ | SINE | Alu | AluSp |
CAediting_437511 | chr5_141472825_+ | SINE | Alu | AluSp |
CAediting_437512 | chr5_141472826_+ | SINE | Alu | AluSp |
CAediting_437513 | chr5_141472829_+ | SINE | Alu | AluSp |
CAediting_437514 | chr5_141472831_+ | SINE | Alu | AluSp |
CAediting_437515 | chr5_141472839_+ | SINE | Alu | AluSp |
CAediting_437516 | chr5_141472892_+ | SINE | Alu | AluSp |
CAediting_437517 | chr5_141472898_+ | SINE | Alu | AluSp |
CAediting_437518 | chr5_141472907_+ | SINE | Alu | AluSp |
CAediting_437519 | chr5_141472911_+ | SINE | Alu | AluSp |
CAediting_437520 | chr5_141472912_+ | SINE | Alu | AluSp |
CAediting_437521 | chr5_141472935_+ | SINE | Alu | AluSp |
CAediting_437522 | chr5_141472936_+ | SINE | Alu | AluSp |
CAediting_437523 | chr5_141480318_+ | SINE | Alu | AluJr |
CAediting_437524 | chr5_141480354_+ | SINE | Alu | AluJr |
CAediting_437525 | chr5_141480378_+ | SINE | Alu | AluJr |
CAediting_437526 | chr5_141480650_+ | DNA | hAT-Charlie | MER5B |
CAediting_437527 | chr5_141480655_+ | DNA | hAT-Charlie | MER5B |
CAediting_437528 | chr5_141480656_+ | DNA | hAT-Charlie | MER5B |
CAediting_437529 | chr5_141480858_+ | SINE | Alu | AluSx4 |
CAediting_437530 | chr5_141480861_+ | SINE | Alu | AluSx4 |
CAediting_437531 | chr5_141480880_+ | SINE | Alu | AluSx4 |
CAediting_437532 | chr5_141480906_+ | SINE | Alu | AluSx4 |
CAediting_437533 | chr5_141480918_+ | SINE | Alu | AluSx4 |
CAediting_437534 | chr5_141480930_+ | SINE | Alu | AluSx4 |
CAediting_437535 | chr5_141480983_+ | SINE | Alu | AluSx4 |
CAediting_437536 | chr5_141480993_+ | SINE | Alu | AluSx4 |
CAediting_437537 | chr5_141481040_+ | SINE | Alu | AluSx4 |
CAediting_437538 | chr5_141481075_+ | SINE | Alu | AluSx4 |
CAediting_437539 | chr5_141481590_+ | SINE | Alu | AluSq2 |
CAediting_437540 | chr5_141481964_+ | SINE | Alu | AluSq2 |
CAediting_437541 | chr5_141481974_+ | SINE | Alu | AluSq2 |
CAediting_437542 | chr5_141482034_+ | SINE | Alu | AluSq2 |
CAediting_437543 | chr5_141483067_+ | SINE | Alu | AluSx1 |
CAediting_437544 | chr5_141503492_+ | SINE | Alu | AluSx4 |
CAediting_437545 | chr5_141503493_+ | SINE | Alu | AluSx4 |
CAediting_437546 | chr5_141503501_+ | SINE | Alu | AluSx4 |
CAediting_437547 | chr5_141503505_+ | SINE | Alu | AluSx4 |
CAediting_437548 | chr5_141504978_+ | SINE | Alu | AluSx1 |
CAediting_437549 | chr5_141504986_+ | SINE | Alu | AluSx1 |
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RNA A-to-I editing events in the alternative splicing sites for PCDHGA1 |
RNA A-to-I editing(s) in the alternative splicing sites. |
AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000204956.5.PCDHGA1. |
Correlation between RNA A-to-I editing and PSI for ENSG00000204956.5.PCDHGA1. |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PCDHGA1 |
Differential gene expressions between RNA A-to-I edited and non-edited tumor samples. * The grey color means N/A. |
Correlation between RNA A-to-I editing and gene expression. |
- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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Protein coding region RNA A-to-I editings for PCDHGA1 |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for PCDHGA1 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_437160 | chr5_141334370_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-147b-5p | 141334368 | 141334375 | 8mer-1a | 141334354 | 141334375 | 141.00 | -13.59 |
CAediting_437160 | chr5_141334370_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-4261 | 141334368 | 141334375 | 8mer-1a | 141334360 | 141334375 | 153.00 | -14.74 |
CAediting_437160 | chr5_141334370_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-494-3p | 141334368 | 141334373 | 6mer | 141334353 | 141334374 | 148.00 | -15.05 |
CAediting_437163 | chr5_141334380_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-548g-3p | 141334376 | 141334382 | 7mer-m8 | 141334359 | 141334383 | 147.00 | -9.28 |
CAediting_437155 | chr5_141333737_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-500a-3p | 141333736 | 141333741 | 6mer | 141333721 | 141333742 | 144.00 | -21.72 |
CAediting_437157 | chr5_141333787_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-1199-5p | 141333780 | 141333786 | 7mer-m8 | 141333768 | 141333787 | 156.00 | -28.57 |
CAediting_437157 | chr5_141333787_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-6078 | 141333783 | 141333790 | 8mer-1a | 141333771 | 141333790 | 152.00 | -22.59 |
CAediting_437157 | chr5_141333787_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-6751-3p | 141333780 | 141333786 | 7mer-m8 | 141333767 | 141333787 | 141.00 | -13.15 |
CAediting_437158 | chr5_141333799_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-6765-5p | 141333797 | 141333803 | 7mer-m8 | 141333783 | 141333804 | 155.00 | -26.81 |
CAediting_437158 | chr5_141333799_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-6787-5p | 141333795 | 141333800 | 6mer | 141333780 | 141333801 | 142.00 | -23.54 |
CAediting_437162 | chr5_141334377_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-302f | 141334375 | 141334381 | 7mer-m8 | 141334366 | 141334382 | 140.00 | -6.19 |
CAediting_437166 | chr5_141334535_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-660-3p | 141334529 | 141334535 | 7mer-m8 | 141334515 | 141334536 | 158.00 | -22.49 |
CAediting_437164 | chr5_141334387_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-4749-3p | 141334383 | 141334389 | 7mer-m8 | 141334371 | 141334390 | 140.00 | -14.45 |
CAediting_437164 | chr5_141334387_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-6769a-3p | 141334384 | 141334390 | 7mer-m8 | 141334371 | 141334391 | 145.00 | -17.29 |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_437158 | chr5_141333799_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-1233-5p | 141333793 | 141333799 | 7mer-m8 | 141333775 | 141333800 | 147 | -26.05 |
CAediting_437158 | chr5_141333799_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-1233-5p | 141333793 | 141333799 | 7mer-m8 | 141333775 | 141333800 | 147 | -26.05 |
CAediting_437155 | chr5_141333737_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-1251-5p | 141333731 | 141333737 | 7mer-m8 | 141333717 | 141333738 | 143 | -18.04 |
CAediting_437158 | chr5_141333799_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-30b-3p | 141333792 | 141333798 | 7mer-m8 | 141333780 | 141333799 | 142 | -16.35 |
CAediting_437158 | chr5_141333799_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-3689a-3p | 141333792 | 141333798 | 7mer-m8 | 141333778 | 141333799 | 142 | -16.46 |
CAediting_437158 | chr5_141333799_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-3689b-3p | 141333792 | 141333798 | 7mer-m8 | 141333778 | 141333799 | 142 | -17.95 |
CAediting_437158 | chr5_141333799_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-3689c | 141333792 | 141333798 | 7mer-m8 | 141333778 | 141333799 | 142 | -17.95 |
CAediting_437166 | chr5_141334535_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-617 | 141334531 | 141334538 | 8mer-1a | 141334516 | 141334538 | 145 | -17.76 |
CAediting_437158 | chr5_141333799_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-6778-5p | 141333793 | 141333799 | 7mer-m8 | 141333779 | 141333800 | 150 | -23.18 |
CAediting_437158 | chr5_141333799_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-6779-5p | 141333792 | 141333798 | 7mer-m8 | 141333776 | 141333799 | 149 | -24.64 |
CAediting_437158 | chr5_141333799_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-6780a-5p | 141333792 | 141333798 | 7mer-m8 | 141333777 | 141333799 | 141 | -21.68 |
CAediting_437159 | chr5_141334362_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-6807-5p | 141334355 | 141334361 | 7mer-m8 | 141334341 | 141334362 | 147 | -20.75 |
CAediting_437156 | chr5_141333761_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-6807-5p | 141333754 | 141333760 | 7mer-m8 | 141333740 | 141333761 | 145 | -19.34 |
CAediting_437164 | chr5_141334387_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-6819-3p | 141334384 | 141334390 | 7mer-m8 | 141334371 | 141334391 | 140 | -11.01 |
CAediting_437159 | chr5_141334362_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-6863 | 141334360 | 141334366 | 7mer-m8 | 141334345 | 141334367 | 141 | -17.45 |
CAediting_437164 | chr5_141334387_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-6877-3p | 141334384 | 141334390 | 7mer-m8 | 141334371 | 141334391 | 143 | -18.15 |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_748296 | chr10_51299626_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-605-3p | 141334567 | 141334573 | 7mer-m8 | 141334552 | 141334574 | 149 | -16.12 |
CAediting_980496 | chr14_31014685_- | ENSG00000204956.5 | ENST00000378105 | hsa-miR-624-3p | 141334595 | 141334601 | 7mer-m8 | 141334582 | 141334602 | 148 | -14.92 |
CAediting_748296 | chr10_51299626_+ | ENSG00000204956.5 | ENST00000517417 | hsa-miR-605-3p | 141512422 | 141512428 | 7mer-m8 | 141512408 | 141512429 | 140 | -14.25 |
CAediting_688080 | chr9_63819626_+ | ENSG00000204956.5 | ENST00000517417 | hsa-miR-4477b | 141511898 | 141511905 | 8mer-1a | 141511884 | 141511905 | 140 | -10.96 |
CAediting_1306323 | chr19_13836462_- | ENSG00000204956.5 | ENST00000378105 | hsa-miR-27a-3p | 141334551 | 141334557 | 7mer-m8 | 141334536 | 141334558 | 151 | -18.78 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000204956.5 | ENST00000517417 | hsa-miR-548aa | 141512927 | 141512933 | 7mer-m8 | 141512911 | 141512934 | 152 | -9.35 |
CAediting_1351755 | chr19_40282625_- | ENSG00000204956.5 | ENST00000517417 | hsa-miR-641 | 141512893 | 141512899 | 7mer-1a | 141512877 | 141512899 | 155 | -23.62 |
CAediting_77128 | chr1_85133844_+ | ENSG00000204956.5 | ENST00000517417 | hsa-miR-4423-3p | 141511321 | 141511327 | 7mer-m8 | 141511308 | 141511328 | 140 | -12.68 |
CAediting_468389 | chr6_31355314_- | ENSG00000204956.5 | ENST00000517417 | hsa-miR-6891-5p | 141511526 | 141511532 | 7mer-m8 | 141511515 | 141511533 | 157 | -27.64 |
CAediting_468389 | chr6_31355314_- | ENSG00000204956.5 | ENST00000517417 | hsa-miR-6891-5p | 141511893 | 141511899 | 7mer-m8 | 141511886 | 141511903 | 159 | -34.53 |
CAediting_468389 | chr6_31355314_- | ENSG00000204956.5 | ENST00000517417 | hsa-miR-6891-5p | 141511896 | 141511903 | 8mer-1a | 141511886 | 141511903 | 159 | -34.53 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_86358 | chr1_109598906_+ | ENSG00000204956.5 | ENST00000378105 | hsa-miR-197-5p | 141333511 | 141333517 | 7mer-m8 | 141333497 | 141333518 | 146 | -19.84 |
CAediting_1306324 | chr19_13836464_- | ENSG00000204956.5 | ENST00000378105 | hsa-miR-27a-3p | 141333306 | 141333312 | 7mer-m8 | 141333293 | 141333313 | 140 | -13.25 |
CAediting_1306323 | chr19_13836462_- | ENSG00000204956.5 | ENST00000378105 | hsa-miR-27a-3p | 141333306 | 141333312 | 7mer-m8 | 141333293 | 141333313 | 140 | -13.25 |
CAediting_1306324 | chr19_13836464_- | ENSG00000204956.5 | ENST00000378105 | hsa-miR-27a-3p | 141333550 | 141333556 | 7mer-m8 | 141333537 | 141333557 | 148 | -14.75 |
CAediting_1306323 | chr19_13836462_- | ENSG00000204956.5 | ENST00000378105 | hsa-miR-27a-3p | 141333550 | 141333556 | 7mer-m8 | 141333537 | 141333557 | 148 | -14.75 |
CAediting_1368054 | chr19_46709310_- | ENSG00000204956.5 | ENST00000517417 | hsa-miR-320e | 141512137 | 141512143 | 7mer-m8 | 141512127 | 141512144 | 142 | -16.72 |
CAediting_468389 | chr6_31355314_- | ENSG00000204956.5 | ENST00000517417 | hsa-miR-6891-5p | 141512541 | 141512547 | 7mer-m8 | 141512531 | 141512548 | 143 | -22.29 |
CAediting_468389 | chr6_31355314_- | ENSG00000204956.5 | ENST00000517417 | hsa-miR-6891-5p | 141511652 | 141511657 | 6mer | 141511639 | 141511658 | 144 | -25 |
CAediting_468389 | chr6_31355314_- | ENSG00000204956.5 | ENST00000517417 | hsa-miR-6891-5p | 141511705 | 141511711 | 7mer-m8 | 141511694 | 141511712 | 152 | -26.21 |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for PCDHGA1 |
- RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
ENST00000378105.4 | protein_coding |
RNA A-to-I editing in RNA structures for Minimum free energy (MFE). |
CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_437155 | ENST00000378105.4 | chr5_141333737_+ | -1343.00 | -1341.80 | -1370.70 |
CAediting_437156 | ENST00000378105.4 | chr5_141333761_+ | -1347.20 | -1341.80 | -1370.70 |
CAediting_437157 | ENST00000378105.4 | chr5_141333787_+ | -1341.50 | -1341.80 | -1370.70 |
CAediting_437158 | ENST00000378105.4 | chr5_141333799_+ | -1343.00 | -1341.80 | -1370.70 |
CAediting_437159 | ENST00000378105.4 | chr5_141334362_+ | -1341.50 | -1341.80 | -1370.70 |
CAediting_437160 | ENST00000378105.4 | chr5_141334370_+ | -1341.50 | -1341.80 | -1370.70 |
CAediting_437161 | ENST00000378105.4 | chr5_141334376_+ | -1341.20 | -1341.80 | -1370.70 |
CAediting_437162 | ENST00000378105.4 | chr5_141334377_+ | -1348.50 | -1341.80 | -1370.70 |
CAediting_437163 | ENST00000378105.4 | chr5_141334380_+ | -1344.40 | -1341.80 | -1370.70 |
CAediting_437164 | ENST00000378105.4 | chr5_141334387_+ | -1340.90 | -1341.80 | -1370.70 |
CAediting_437165 | ENST00000378105.4 | chr5_141334401_+ | -1343.50 | -1341.80 | -1370.70 |
CAediting_437166 | ENST00000378105.4 | chr5_141334535_+ | -1348.40 | -1341.80 | -1370.70 |
CAediting_437167 | ENST00000378105.4 | chr5_141334552_+ | -1348.50 | -1341.80 | -1370.70 |
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Relation with ADAR for PCDHGA1 |
Correlation between ADAR gene expression and RNA editing frequency |
Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
KIRC | CAediting_437217 | chr5_141377493_+ | . | . | 0.00140059475426752 | 0.388107339021223 | . | . |
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Relation with cancer stages for PCDHGA1 |
Correlation between Cancer stages and RNA editing frequency |
Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for PCDHGA1 |
Correlation between RNA editing and survival |
Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for PCDHGA1 |
Approved drugs targeting this gene. (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PCDHGA1 |
Diseases associated with this gene. (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |