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Editing gene: PCDHGA9 (CAeditome ID:56107)

Gene summary for PCDHGA9

Gene summary

Gene information	Gene symbol	PCDHGA9
	Gene ID	56107
	Gene name	protocadherin gamma subfamily A, 9
	Synonyms	PCDH-GAMMA-A9
	Cytomap	5q31.3
	Type of gene	protein-coding
	Description	protocadherin gamma-A9
	Modification date	20210518
	UniProtAcc	Q9Y5G4
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for PCDHGA9

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000261934.2

RNA A-to-I editing events in Cancer.

CAediting_437257(141405443, +), CAediting_437258(141405514, +), CAediting_437259(141405520, +), CAediting_437260(141405706, +), CAediting_437261(141405739, +), CAediting_437262(141405740, +), CAediting_437263(141406256, +), CAediting_437264(141410934, +), CAediting_437265(141410954, +), CAediting_437266(141410971, +), CAediting_437267(141410979, +), CAediting_437268(141410980, +), CAediting_437269(141410983, +), CAediting_437270(141411032, +), CAediting_437271(141411035, +), CAediting_437272(141411052, +), CAediting_437273(141411111, +), CAediting_437274(141411112, +), CAediting_437275(141411308, +), CAediting_437276(141411312, +), CAediting_437277(141411343, +), CAediting_437278(141411344, +), CAediting_437279(141411362, +), CAediting_437280(141411365, +), CAediting_437281(141411383, +), CAediting_437282(141411388, +), CAediting_437283(141411427, +), CAediting_437284(141411437, +), CAediting_437285(141411450, +), CAediting_437286(141411486, +), CAediting_437287(141411517, +), CAediting_437288(141411529, +), CAediting_437289(141411566, +), CAediting_437290(141411568, +), CAediting_437291(141411627, +), CAediting_437292(141411628, +), CAediting_437293(141411633, +), CAediting_437294(141411636, +), CAediting_437295(141411644, +), CAediting_437296(141411650, +), CAediting_437297(141411676, +), CAediting_437298(141411681, +), CAediting_437299(141411695, +), CAediting_437300(141411731, +), CAediting_437301(141411738, +), CAediting_437302(141411771, +), CAediting_437303(141411791, +), CAediting_437304(141411793, +), CAediting_437305(141411794, +), CAediting_437306(141411802, +), CAediting_437307(141411811, +), CAediting_437308(141411835, +), CAediting_437309(141433238, +), CAediting_437310(141433245, +), CAediting_437311(141433273, +), CAediting_437312(141433297, +), CAediting_437313(141433323, +), CAediting_437314(141433420, +), CAediting_437315(141433424, +), CAediting_437316(141433494, +), CAediting_437317(141433495, +), CAediting_437318(141433508, +), CAediting_437319(141433717, +), CAediting_437320(141433757, +), CAediting_437321(141433758, +), CAediting_437322(141433778, +), CAediting_437323(141433787, +), CAediting_437324(141437940, +), CAediting_437325(141437993, +), CAediting_437326(141438010, +), CAediting_437327(141438015, +), CAediting_437328(141439113, +), CAediting_437329(141443285, +), CAediting_437330(141443405, +), CAediting_437331(141443471, +), CAediting_437332(141446741, +), CAediting_437333(141448011, +), CAediting_437334(141448076, +), CAediting_437335(141449329, +), CAediting_437336(141450550, +), CAediting_437337(141450673, +), CAediting_437338(141450674, +), CAediting_437339(141451010, +), CAediting_437340(141451696, +), CAediting_437341(141451698, +), CAediting_437342(141451856, +), CAediting_437343(141452672, +), CAediting_437344(141453177, +), CAediting_437345(141453183, +), CAediting_437346(141453256, +), CAediting_437347(141453386, +), CAediting_437348(141453394, +), CAediting_437349(141453406, +), CAediting_437350(141454486, +), CAediting_437351(141456096, +), CAediting_437352(141458845, +), CAediting_437353(141459957, +), CAediting_437354(141459958, +), CAediting_437355(141459998, +), CAediting_437356(141461693, +), CAediting_437357(141464010, +), CAediting_437358(141464031, +), CAediting_437359(141464100, +), CAediting_437360(141464154, +), CAediting_437361(141464167, +), CAediting_437362(141464171, +), CAediting_437363(141464190, +), CAediting_437364(141464217, +), CAediting_437365(141464755, +), CAediting_437366(141464808, +), CAediting_437367(141464813, +), CAediting_437368(141464851, +), CAediting_437369(141464856, +), CAediting_437370(141464864, +), CAediting_437371(141464868, +), CAediting_437372(141464872, +), CAediting_437373(141464878, +), CAediting_437374(141464880, +), CAediting_437375(141464900, +), CAediting_437376(141464977, +), CAediting_437377(141464994, +), CAediting_437378(141465010, +), CAediting_437379(141465868, +), CAediting_437380(141466210, +), CAediting_437381(141466283, +), CAediting_437382(141466310, +), CAediting_437383(141467122, +), CAediting_437384(141467200, +), CAediting_437385(141467287, +), CAediting_437386(141467327, +), CAediting_437387(141467336, +), CAediting_437388(141467685, +), CAediting_437389(141467712, +), CAediting_437390(141467726, +), CAediting_437391(141467731, +), CAediting_437392(141467742, +), CAediting_437393(141467762, +), CAediting_437394(141467776, +), CAediting_437395(141467784, +), CAediting_437396(141467785, +), CAediting_437397(141467788, +), CAediting_437398(141467798, +), CAediting_437399(141467800, +), CAediting_437400(141467806, +), CAediting_437401(141467811, +), CAediting_437402(141467816, +), CAediting_437403(141467856, +), CAediting_437404(141467859, +), CAediting_437405(141467879, +), CAediting_437406(141467893, +), CAediting_437407(141467894, +), CAediting_437408(141467906, +), CAediting_437409(141467911, +), CAediting_437410(141467921, +), CAediting_437411(141467927, +), CAediting_437412(141467933, +), CAediting_437413(141467936, +), CAediting_437414(141467939, +), CAediting_437415(141467951, +), CAediting_437416(141468061, +), CAediting_437417(141468063, +), CAediting_437418(141468069, +), CAediting_437419(141468070, +), CAediting_437420(141468075, +), CAediting_437421(141468124, +), CAediting_437422(141468126, +), CAediting_437423(141468147, +), CAediting_437424(141468149, +), CAediting_437425(141468163, +), CAediting_437426(141468169, +), CAediting_437427(141468172, +), CAediting_437428(141468173, +), CAediting_437429(141468174, +), CAediting_437430(141468175, +), CAediting_437431(141468186, +), CAediting_437432(141468204, +), CAediting_437433(141468205, +), CAediting_437434(141468210, +), CAediting_437435(141468224, +), CAediting_437436(141468231, +), CAediting_437437(141468237, +), CAediting_437438(141468245, +), CAediting_437439(141468246, +), CAediting_437440(141468257, +), CAediting_437441(141468270, +), CAediting_437442(141468275, +), CAediting_437443(141468280, +), CAediting_437444(141468745, +), CAediting_437445(141469021, +), CAediting_437446(141469022, +), CAediting_437447(141469043, +), CAediting_437448(141469086, +), CAediting_437449(141469094, +), CAediting_437450(141469118, +), CAediting_437451(141469129, +), CAediting_437452(141469133, +), CAediting_437453(141469147, +), CAediting_437454(141469155, +), CAediting_437455(141469165, +), CAediting_437456(141469182, +), CAediting_437457(141469183, +), CAediting_437458(141469196, +), CAediting_437459(141469206, +), CAediting_437460(141469232, +), CAediting_437461(141469257, +), CAediting_437462(141469264, +), CAediting_437463(141469265, +), CAediting_437464(141469313, +), CAediting_437465(141469321, +), CAediting_437466(141469322, +), CAediting_437467(141469364, +), CAediting_437468(141469454, +), CAediting_437469(141469671, +), CAediting_437470(141469691, +), CAediting_437471(141469710, +), CAediting_437472(141469713, +), CAediting_437473(141469724, +), CAediting_437474(141469726, +), CAediting_437475(141469727, +), CAediting_437476(141469728, +), CAediting_437477(141469860, +), CAediting_437478(141469893, +), CAediting_437479(141469906, +), CAediting_437480(141469921, +), CAediting_437481(141470009, +), CAediting_437482(141470050, +), CAediting_437483(141470084, +), CAediting_437484(141470092, +), CAediting_437485(141470108, +), CAediting_437486(141470765, +), CAediting_437487(141470788, +), CAediting_437488(141470792, +), CAediting_437489(141470800, +), CAediting_437490(141470821, +), CAediting_437491(141470830, +), CAediting_437492(141470937, +), CAediting_437493(141470951, +), CAediting_437494(141471150, +), CAediting_437495(141471234, +), CAediting_437496(141471251, +), CAediting_437497(141471294, +), CAediting_437498(141471325, +), CAediting_437499(141472364, +), CAediting_437500(141472387, +), CAediting_437501(141472461, +), CAediting_437502(141472465, +), CAediting_437503(141472724, +), CAediting_437504(141472730, +), CAediting_437505(141472731, +), CAediting_437506(141472784, +), CAediting_437507(141472785, +), CAediting_437508(141472796, +), CAediting_437509(141472809, +), CAediting_437510(141472822, +), CAediting_437511(141472825, +), CAediting_437512(141472826, +), CAediting_437513(141472829, +), CAediting_437514(141472831, +), CAediting_437515(141472839, +), CAediting_437516(141472892, +), CAediting_437517(141472898, +), CAediting_437518(141472907, +), CAediting_437519(141472911, +), CAediting_437520(141472912, +), CAediting_437521(141472935, +), CAediting_437522(141472936, +), CAediting_437523(141480318, +), CAediting_437524(141480354, +), CAediting_437525(141480378, +), CAediting_437526(141480650, +), CAediting_437527(141480655, +), CAediting_437528(141480656, +), CAediting_437529(141480858, +), CAediting_437530(141480861, +), CAediting_437531(141480880, +), CAediting_437532(141480906, +), CAediting_437533(141480918, +), CAediting_437534(141480930, +), CAediting_437535(141480983, +), CAediting_437536(141480993, +), CAediting_437537(141481040, +), CAediting_437538(141481075, +), CAediting_437539(141481590, +), CAediting_437540(141481964, +), CAediting_437541(141481974, +), CAediting_437542(141482034, +), CAediting_437543(141483067, +), CAediting_437544(141503492, +), CAediting_437545(141503493, +), CAediting_437546(141503501, +), CAediting_437547(141503505, +), CAediting_437548(141504978, +), CAediting_437549(141504986, +),

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RNA editing positional annotations for PCDHGA9 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_437257	chr5_141405443_+	UTR3
CAediting_437258	chr5_141405514_+	intronic
CAediting_437259	chr5_141405520_+	intronic
CAediting_437260	chr5_141405706_+	intronic
CAediting_437261	chr5_141405739_+	intronic
CAediting_437262	chr5_141405740_+	intronic
CAediting_437263	chr5_141406256_+	intronic
CAediting_437264	chr5_141410934_+	UTR3
CAediting_437265	chr5_141410954_+	UTR3
CAediting_437266	chr5_141410971_+	UTR3
CAediting_437267	chr5_141410979_+	UTR3
CAediting_437268	chr5_141410980_+	UTR3
CAediting_437269	chr5_141410983_+	UTR3
CAediting_437270	chr5_141411032_+	UTR3
CAediting_437271	chr5_141411035_+	UTR3
CAediting_437272	chr5_141411052_+	UTR3
CAediting_437273	chr5_141411111_+	UTR3
CAediting_437274	chr5_141411112_+	UTR3
CAediting_437275	chr5_141411308_+	UTR3
CAediting_437276	chr5_141411312_+	UTR3
CAediting_437277	chr5_141411343_+	UTR3
CAediting_437278	chr5_141411344_+	UTR3
CAediting_437279	chr5_141411362_+	UTR3
CAediting_437280	chr5_141411365_+	UTR3
CAediting_437281	chr5_141411383_+	UTR3
CAediting_437282	chr5_141411388_+	UTR3
CAediting_437283	chr5_141411427_+	UTR3
CAediting_437284	chr5_141411437_+	UTR3
CAediting_437285	chr5_141411450_+	UTR3
CAediting_437286	chr5_141411486_+	UTR3
CAediting_437287	chr5_141411517_+	UTR3
CAediting_437288	chr5_141411529_+	UTR3
CAediting_437289	chr5_141411566_+	UTR3
CAediting_437290	chr5_141411568_+	UTR3
CAediting_437291	chr5_141411627_+	UTR3
CAediting_437292	chr5_141411628_+	UTR3
CAediting_437293	chr5_141411633_+	UTR3
CAediting_437294	chr5_141411636_+	UTR3
CAediting_437295	chr5_141411644_+	UTR3
CAediting_437296	chr5_141411650_+	UTR3
CAediting_437297	chr5_141411676_+	UTR3
CAediting_437298	chr5_141411681_+	UTR3
CAediting_437299	chr5_141411695_+	UTR3
CAediting_437300	chr5_141411731_+	UTR3
CAediting_437301	chr5_141411738_+	UTR3
CAediting_437302	chr5_141411771_+	UTR3
CAediting_437303	chr5_141411791_+	UTR3
CAediting_437304	chr5_141411793_+	UTR3
CAediting_437305	chr5_141411794_+	UTR3
CAediting_437306	chr5_141411802_+	UTR3
CAediting_437307	chr5_141411811_+	UTR3
CAediting_437308	chr5_141411835_+	UTR3
CAediting_437309	chr5_141433238_+	intronic
CAediting_437310	chr5_141433245_+	intronic
CAediting_437311	chr5_141433273_+	intronic
CAediting_437312	chr5_141433297_+	intronic
CAediting_437313	chr5_141433323_+	intronic
CAediting_437314	chr5_141433420_+	intronic
CAediting_437315	chr5_141433424_+	intronic
CAediting_437316	chr5_141433494_+	intronic
CAediting_437317	chr5_141433495_+	intronic
CAediting_437318	chr5_141433508_+	intronic
CAediting_437319	chr5_141433717_+	intronic
CAediting_437320	chr5_141433757_+	intronic
CAediting_437321	chr5_141433758_+	intronic
CAediting_437322	chr5_141433778_+	intronic
CAediting_437323	chr5_141433787_+	intronic
CAediting_437324	chr5_141437940_+	intronic
CAediting_437325	chr5_141437993_+	intronic
CAediting_437326	chr5_141438010_+	intronic
CAediting_437327	chr5_141438015_+	intronic
CAediting_437328	chr5_141439113_+	intronic
CAediting_437329	chr5_141443285_+	intronic
CAediting_437330	chr5_141443405_+	intronic
CAediting_437331	chr5_141443471_+	intronic
CAediting_437332	chr5_141446741_+	intronic
CAediting_437333	chr5_141448011_+	intronic
CAediting_437334	chr5_141448076_+	intronic
CAediting_437335	chr5_141449329_+	intronic
CAediting_437336	chr5_141450550_+	intronic
CAediting_437337	chr5_141450673_+	intronic
CAediting_437338	chr5_141450674_+	intronic
CAediting_437339	chr5_141451010_+	intronic
CAediting_437340	chr5_141451696_+	intronic
CAediting_437341	chr5_141451698_+	intronic
CAediting_437342	chr5_141451856_+	intronic
CAediting_437343	chr5_141452672_+	intronic
CAediting_437344	chr5_141453177_+	intronic
CAediting_437345	chr5_141453183_+	intronic
CAediting_437346	chr5_141453256_+	intronic
CAediting_437347	chr5_141453386_+	intronic
CAediting_437348	chr5_141453394_+	intronic
CAediting_437349	chr5_141453406_+	intronic
CAediting_437350	chr5_141454486_+	intronic
CAediting_437351	chr5_141456096_+	intronic
CAediting_437352	chr5_141458845_+	intronic
CAediting_437353	chr5_141459957_+	intronic
CAediting_437354	chr5_141459958_+	intronic
CAediting_437355	chr5_141459998_+	intronic
CAediting_437356	chr5_141461693_+	intronic
CAediting_437357	chr5_141464010_+	intronic
CAediting_437358	chr5_141464031_+	intronic
CAediting_437359	chr5_141464100_+	intronic
CAediting_437360	chr5_141464154_+	intronic
CAediting_437361	chr5_141464167_+	intronic
CAediting_437362	chr5_141464171_+	intronic
CAediting_437363	chr5_141464190_+	intronic
CAediting_437364	chr5_141464217_+	intronic
CAediting_437365	chr5_141464755_+	intronic
CAediting_437366	chr5_141464808_+	intronic
CAediting_437367	chr5_141464813_+	intronic
CAediting_437368	chr5_141464851_+	intronic
CAediting_437369	chr5_141464856_+	intronic
CAediting_437370	chr5_141464864_+	intronic
CAediting_437371	chr5_141464868_+	intronic
CAediting_437372	chr5_141464872_+	intronic
CAediting_437373	chr5_141464878_+	intronic
CAediting_437374	chr5_141464880_+	intronic
CAediting_437375	chr5_141464900_+	intronic
CAediting_437376	chr5_141464977_+	intronic
CAediting_437377	chr5_141464994_+	intronic
CAediting_437378	chr5_141465010_+	intronic
CAediting_437379	chr5_141465868_+	intronic
CAediting_437380	chr5_141466210_+	intronic
CAediting_437381	chr5_141466283_+	intronic
CAediting_437382	chr5_141466310_+	intronic
CAediting_437383	chr5_141467122_+	intronic
CAediting_437384	chr5_141467200_+	intronic
CAediting_437385	chr5_141467287_+	intronic
CAediting_437386	chr5_141467327_+	intronic
CAediting_437387	chr5_141467336_+	intronic
CAediting_437388	chr5_141467685_+	intronic
CAediting_437389	chr5_141467712_+	intronic
CAediting_437390	chr5_141467726_+	intronic
CAediting_437391	chr5_141467731_+	intronic
CAediting_437392	chr5_141467742_+	intronic
CAediting_437393	chr5_141467762_+	intronic
CAediting_437394	chr5_141467776_+	intronic
CAediting_437395	chr5_141467784_+	intronic
CAediting_437396	chr5_141467785_+	intronic
CAediting_437397	chr5_141467788_+	intronic
CAediting_437398	chr5_141467798_+	intronic
CAediting_437399	chr5_141467800_+	intronic
CAediting_437400	chr5_141467806_+	intronic
CAediting_437401	chr5_141467811_+	intronic
CAediting_437402	chr5_141467816_+	intronic
CAediting_437403	chr5_141467856_+	intronic
CAediting_437404	chr5_141467859_+	intronic
CAediting_437405	chr5_141467879_+	intronic
CAediting_437406	chr5_141467893_+	intronic
CAediting_437407	chr5_141467894_+	intronic
CAediting_437408	chr5_141467906_+	intronic
CAediting_437409	chr5_141467911_+	intronic
CAediting_437410	chr5_141467921_+	intronic
CAediting_437411	chr5_141467927_+	intronic
CAediting_437412	chr5_141467933_+	intronic
CAediting_437413	chr5_141467936_+	intronic
CAediting_437414	chr5_141467939_+	intronic
CAediting_437415	chr5_141467951_+	intronic
CAediting_437416	chr5_141468061_+	intronic
CAediting_437417	chr5_141468063_+	intronic
CAediting_437418	chr5_141468069_+	intronic
CAediting_437419	chr5_141468070_+	intronic
CAediting_437420	chr5_141468075_+	intronic
CAediting_437421	chr5_141468124_+	intronic
CAediting_437422	chr5_141468126_+	intronic
CAediting_437423	chr5_141468147_+	intronic
CAediting_437424	chr5_141468149_+	intronic
CAediting_437425	chr5_141468163_+	intronic
CAediting_437426	chr5_141468169_+	intronic
CAediting_437427	chr5_141468172_+	intronic
CAediting_437428	chr5_141468173_+	intronic
CAediting_437429	chr5_141468174_+	intronic
CAediting_437430	chr5_141468175_+	intronic
CAediting_437431	chr5_141468186_+	intronic
CAediting_437432	chr5_141468204_+	intronic
CAediting_437433	chr5_141468205_+	intronic
CAediting_437434	chr5_141468210_+	intronic
CAediting_437435	chr5_141468224_+	intronic
CAediting_437436	chr5_141468231_+	intronic
CAediting_437437	chr5_141468237_+	intronic
CAediting_437438	chr5_141468245_+	intronic
CAediting_437439	chr5_141468246_+	intronic
CAediting_437440	chr5_141468257_+	intronic
CAediting_437441	chr5_141468270_+	intronic
CAediting_437442	chr5_141468275_+	intronic
CAediting_437443	chr5_141468280_+	intronic
CAediting_437444	chr5_141468745_+	ncRNA_intronic
CAediting_437445	chr5_141469021_+	ncRNA_intronic
CAediting_437446	chr5_141469022_+	ncRNA_intronic
CAediting_437447	chr5_141469043_+	ncRNA_intronic
CAediting_437448	chr5_141469086_+	ncRNA_intronic
CAediting_437449	chr5_141469094_+	ncRNA_intronic
CAediting_437450	chr5_141469118_+	ncRNA_intronic
CAediting_437451	chr5_141469129_+	ncRNA_intronic
CAediting_437452	chr5_141469133_+	ncRNA_intronic
CAediting_437453	chr5_141469147_+	ncRNA_intronic
CAediting_437454	chr5_141469155_+	ncRNA_intronic
CAediting_437455	chr5_141469165_+	ncRNA_intronic
CAediting_437456	chr5_141469182_+	ncRNA_intronic
CAediting_437457	chr5_141469183_+	ncRNA_intronic
CAediting_437458	chr5_141469196_+	ncRNA_intronic
CAediting_437459	chr5_141469206_+	ncRNA_intronic
CAediting_437460	chr5_141469232_+	ncRNA_intronic
CAediting_437461	chr5_141469257_+	ncRNA_intronic
CAediting_437462	chr5_141469264_+	ncRNA_intronic
CAediting_437463	chr5_141469265_+	ncRNA_intronic
CAediting_437464	chr5_141469313_+	ncRNA_intronic
CAediting_437465	chr5_141469321_+	ncRNA_intronic
CAediting_437466	chr5_141469322_+	ncRNA_intronic
CAediting_437467	chr5_141469364_+	ncRNA_intronic
CAediting_437468	chr5_141469454_+	ncRNA_intronic
CAediting_437469	chr5_141469671_+	ncRNA_intronic
CAediting_437470	chr5_141469691_+	ncRNA_intronic
CAediting_437471	chr5_141469710_+	ncRNA_intronic
CAediting_437472	chr5_141469713_+	ncRNA_intronic
CAediting_437473	chr5_141469724_+	ncRNA_intronic
CAediting_437474	chr5_141469726_+	ncRNA_intronic
CAediting_437475	chr5_141469727_+	ncRNA_intronic
CAediting_437476	chr5_141469728_+	ncRNA_intronic
CAediting_437477	chr5_141469860_+	ncRNA_intronic
CAediting_437478	chr5_141469893_+	ncRNA_intronic
CAediting_437479	chr5_141469906_+	ncRNA_intronic
CAediting_437480	chr5_141469921_+	ncRNA_intronic
CAediting_437481	chr5_141470009_+	ncRNA_intronic
CAediting_437482	chr5_141470050_+	ncRNA_intronic
CAediting_437483	chr5_141470084_+	ncRNA_intronic
CAediting_437484	chr5_141470092_+	ncRNA_intronic
CAediting_437485	chr5_141470108_+	ncRNA_intronic
CAediting_437486	chr5_141470765_+	ncRNA_intronic
CAediting_437487	chr5_141470788_+	ncRNA_intronic
CAediting_437488	chr5_141470792_+	ncRNA_intronic
CAediting_437489	chr5_141470800_+	ncRNA_intronic
CAediting_437490	chr5_141470821_+	ncRNA_intronic
CAediting_437491	chr5_141470830_+	ncRNA_intronic
CAediting_437492	chr5_141470937_+	ncRNA_intronic
CAediting_437493	chr5_141470951_+	ncRNA_intronic
CAediting_437494	chr5_141471150_+	ncRNA_intronic
CAediting_437495	chr5_141471234_+	ncRNA_intronic
CAediting_437496	chr5_141471251_+	ncRNA_intronic
CAediting_437497	chr5_141471294_+	ncRNA_intronic
CAediting_437498	chr5_141471325_+	ncRNA_exonic
CAediting_437499	chr5_141472364_+	intronic
CAediting_437500	chr5_141472387_+	intronic
CAediting_437501	chr5_141472461_+	intronic
CAediting_437502	chr5_141472465_+	intronic
CAediting_437503	chr5_141472724_+	intronic
CAediting_437504	chr5_141472730_+	intronic
CAediting_437505	chr5_141472731_+	intronic
CAediting_437506	chr5_141472784_+	intronic
CAediting_437507	chr5_141472785_+	intronic
CAediting_437508	chr5_141472796_+	intronic
CAediting_437509	chr5_141472809_+	intronic
CAediting_437510	chr5_141472822_+	intronic
CAediting_437511	chr5_141472825_+	intronic
CAediting_437512	chr5_141472826_+	intronic
CAediting_437513	chr5_141472829_+	intronic
CAediting_437514	chr5_141472831_+	intronic
CAediting_437515	chr5_141472839_+	intronic
CAediting_437516	chr5_141472892_+	intronic
CAediting_437517	chr5_141472898_+	intronic
CAediting_437518	chr5_141472907_+	intronic
CAediting_437519	chr5_141472911_+	intronic
CAediting_437520	chr5_141472912_+	intronic
CAediting_437521	chr5_141472935_+	intronic
CAediting_437522	chr5_141472936_+	intronic
CAediting_437523	chr5_141480318_+	ncRNA_intronic
CAediting_437524	chr5_141480354_+	ncRNA_intronic
CAediting_437525	chr5_141480378_+	ncRNA_intronic
CAediting_437526	chr5_141480650_+	ncRNA_intronic
CAediting_437527	chr5_141480655_+	ncRNA_intronic
CAediting_437528	chr5_141480656_+	ncRNA_intronic
CAediting_437529	chr5_141480858_+	ncRNA_intronic
CAediting_437530	chr5_141480861_+	ncRNA_intronic
CAediting_437531	chr5_141480880_+	ncRNA_intronic
CAediting_437532	chr5_141480906_+	ncRNA_intronic
CAediting_437533	chr5_141480918_+	ncRNA_intronic
CAediting_437534	chr5_141480930_+	ncRNA_intronic
CAediting_437535	chr5_141480983_+	ncRNA_intronic
CAediting_437536	chr5_141480993_+	ncRNA_intronic
CAediting_437537	chr5_141481040_+	ncRNA_intronic
CAediting_437538	chr5_141481075_+	ncRNA_intronic
CAediting_437539	chr5_141481590_+	ncRNA_intronic
CAediting_437540	chr5_141481964_+	ncRNA_intronic
CAediting_437541	chr5_141481974_+	ncRNA_intronic
CAediting_437542	chr5_141482034_+	ncRNA_intronic
CAediting_437543	chr5_141483067_+	ncRNA_intronic
CAediting_437544	chr5_141503492_+	ncRNA_intronic
CAediting_437545	chr5_141503493_+	ncRNA_intronic
CAediting_437546	chr5_141503501_+	ncRNA_intronic
CAediting_437547	chr5_141503505_+	ncRNA_intronic
CAediting_437548	chr5_141504978_+	ncRNA_intronic
CAediting_437549	chr5_141504986_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_437257	chr5_141405443_+	SINE	Alu	AluSz
CAediting_437258	chr5_141405514_+	SINE	Alu	AluSz
CAediting_437259	chr5_141405520_+	SINE	Alu	AluSz
CAediting_437260	chr5_141405706_+	SINE	Alu	AluSz
CAediting_437261	chr5_141405739_+	SINE	Alu	AluSz
CAediting_437262	chr5_141405740_+	SINE	Alu	AluSz
CAediting_437263	chr5_141406256_+	SINE	Alu	AluJr
CAediting_437264	chr5_141410934_+	SINE	Alu	AluSx3
CAediting_437265	chr5_141410954_+	SINE	Alu	AluSx3
CAediting_437266	chr5_141410971_+	SINE	Alu	AluSx3
CAediting_437267	chr5_141410979_+	SINE	Alu	AluSx3
CAediting_437268	chr5_141410980_+	SINE	Alu	AluSx3
CAediting_437269	chr5_141410983_+	SINE	Alu	AluSx3
CAediting_437270	chr5_141411032_+	SINE	Alu	AluSx3
CAediting_437271	chr5_141411035_+	SINE	Alu	AluSx3
CAediting_437272	chr5_141411052_+	SINE	Alu	AluSx3
CAediting_437273	chr5_141411111_+	SINE	Alu	AluSx3
CAediting_437274	chr5_141411112_+	SINE	Alu	AluSx3
CAediting_437275	chr5_141411308_+	SINE	Alu	AluJb
CAediting_437276	chr5_141411312_+	SINE	Alu	AluJb
CAediting_437277	chr5_141411343_+	SINE	Alu	AluJb
CAediting_437278	chr5_141411344_+	SINE	Alu	AluJb
CAediting_437279	chr5_141411362_+	SINE	Alu	AluJb
CAediting_437280	chr5_141411365_+	SINE	Alu	AluJb
CAediting_437281	chr5_141411383_+	SINE	Alu	AluJb
CAediting_437282	chr5_141411388_+	SINE	Alu	AluJb
CAediting_437283	chr5_141411427_+	SINE	Alu	AluJb
CAediting_437284	chr5_141411437_+	SINE	Alu	AluJb
CAediting_437285	chr5_141411450_+	SINE	Alu	AluJb
CAediting_437286	chr5_141411486_+	SINE	Alu	AluJb
CAediting_437287	chr5_141411517_+	SINE	Alu	AluJb
CAediting_437288	chr5_141411529_+	SINE	Alu	AluJb
CAediting_437289	chr5_141411566_+	SINE	Alu	AluJb
CAediting_437290	chr5_141411568_+	SINE	Alu	AluJb
CAediting_437291	chr5_141411627_+	SINE	Alu	AluJr
CAediting_437292	chr5_141411628_+	SINE	Alu	AluJr
CAediting_437293	chr5_141411633_+	SINE	Alu	AluJr
CAediting_437294	chr5_141411636_+	SINE	Alu	AluJr
CAediting_437295	chr5_141411644_+	SINE	Alu	AluJr
CAediting_437296	chr5_141411650_+	SINE	Alu	AluJr
CAediting_437297	chr5_141411676_+	SINE	Alu	AluJr
CAediting_437298	chr5_141411681_+	SINE	Alu	AluJr
CAediting_437299	chr5_141411695_+	SINE	Alu	AluJr
CAediting_437300	chr5_141411731_+	SINE	Alu	AluJr
CAediting_437301	chr5_141411738_+	SINE	Alu	AluJr
CAediting_437302	chr5_141411771_+	SINE	Alu	AluJr
CAediting_437303	chr5_141411791_+	SINE	Alu	AluJr
CAediting_437304	chr5_141411793_+	SINE	Alu	AluJr
CAediting_437305	chr5_141411794_+	SINE	Alu	AluJr
CAediting_437306	chr5_141411802_+	SINE	Alu	AluJr
CAediting_437307	chr5_141411811_+	SINE	Alu	AluJr
CAediting_437308	chr5_141411835_+	SINE	Alu	AluJr
CAediting_437309	chr5_141433238_+	SINE	Alu	AluJo
CAediting_437310	chr5_141433245_+	SINE	Alu	AluJo
CAediting_437311	chr5_141433273_+	SINE	Alu	AluJo
CAediting_437312	chr5_141433297_+	SINE	Alu	AluJo
CAediting_437313	chr5_141433323_+	SINE	Alu	AluJo
CAediting_437314	chr5_141433420_+	SINE	Alu	AluJo
CAediting_437315	chr5_141433424_+	SINE	Alu	AluJo
CAediting_437316	chr5_141433494_+	SINE	Alu	AluJo
CAediting_437317	chr5_141433495_+	SINE	Alu	AluJo
CAediting_437318	chr5_141433508_+	SINE	Alu	AluJo
CAediting_437319	chr5_141433717_+	SINE	Alu	AluSp
CAediting_437320	chr5_141433757_+	SINE	Alu	AluSp
CAediting_437321	chr5_141433758_+	SINE	Alu	AluSp
CAediting_437322	chr5_141433778_+	SINE	Alu	AluSp
CAediting_437323	chr5_141433787_+	SINE	Alu	AluSp
CAediting_437324	chr5_141437940_+	SINE	Alu	AluSc
CAediting_437325	chr5_141437993_+	SINE	Alu	AluSc
CAediting_437326	chr5_141438010_+	SINE	Alu	AluSc
CAediting_437327	chr5_141438015_+	SINE	Alu	AluSc
CAediting_437328	chr5_141439113_+	SINE	Alu	AluSx1
CAediting_437329	chr5_141443285_+	SINE	Alu	AluJb
CAediting_437330	chr5_141443405_+	SINE	Alu	AluJb
CAediting_437331	chr5_141443471_+	SINE	Alu	AluJb
CAediting_437332	chr5_141446741_+	SINE	Alu	AluSx4
CAediting_437333	chr5_141448011_+	SINE	Alu	AluSq2
CAediting_437334	chr5_141448076_+	SINE	Alu	AluSq2
CAediting_437335	chr5_141449329_+	SINE	Alu	AluSz6
CAediting_437336	chr5_141450550_+	SINE	Alu	AluSq2
CAediting_437337	chr5_141450673_+	SINE	Alu	AluSq2
CAediting_437338	chr5_141450674_+	SINE	Alu	AluSq2
CAediting_437339	chr5_141451010_+	SINE	Alu	AluSx3
CAediting_437340	chr5_141451696_+	SINE	Alu	AluSz6
CAediting_437341	chr5_141451698_+	SINE	Alu	AluSz6
CAediting_437342	chr5_141451856_+	SINE	Alu	AluSz6
CAediting_437343	chr5_141452672_+	SINE	Alu	AluJo
CAediting_437344	chr5_141453177_+	SINE	Alu	AluJb
CAediting_437345	chr5_141453183_+	SINE	Alu	AluJb
CAediting_437346	chr5_141453256_+	SINE	Alu	AluJb
CAediting_437347	chr5_141453386_+	SINE	Alu	AluJb
CAediting_437348	chr5_141453394_+	SINE	Alu	AluJb
CAediting_437349	chr5_141453406_+	SINE	Alu	AluJb
CAediting_437350	chr5_141454486_+	SINE	Alu	AluSp
CAediting_437351	chr5_141456096_+	SINE	Alu	AluY
CAediting_437352	chr5_141458845_+	SINE	Alu	AluJr
CAediting_437353	chr5_141459957_+	SINE	Alu	AluSx1
CAediting_437354	chr5_141459958_+	SINE	Alu	AluSx1
CAediting_437355	chr5_141459998_+	SINE	Alu	AluSx1
CAediting_437356	chr5_141461693_+	SINE	Alu	AluSq
CAediting_437357	chr5_141464010_+	SINE	Alu	AluSx1
CAediting_437358	chr5_141464031_+	SINE	Alu	AluSx1
CAediting_437359	chr5_141464100_+	SINE	Alu	AluSx1
CAediting_437360	chr5_141464154_+	SINE	Alu	AluSx1
CAediting_437361	chr5_141464167_+	SINE	Alu	AluSx1
CAediting_437362	chr5_141464171_+	SINE	Alu	AluSx1
CAediting_437363	chr5_141464190_+	SINE	Alu	AluSx1
CAediting_437364	chr5_141464217_+	SINE	Alu	AluSx1
CAediting_437365	chr5_141464755_+	SINE	Alu	AluJr4
CAediting_437366	chr5_141464808_+	SINE	Alu	AluJr4
CAediting_437367	chr5_141464813_+	SINE	Alu	AluJr4
CAediting_437368	chr5_141464851_+	SINE	Alu	AluJr4
CAediting_437369	chr5_141464856_+	SINE	Alu	AluJr4
CAediting_437370	chr5_141464864_+	SINE	Alu	AluJr4
CAediting_437371	chr5_141464868_+	SINE	Alu	AluJr4
CAediting_437372	chr5_141464872_+	SINE	Alu	AluJr4
CAediting_437373	chr5_141464878_+	SINE	Alu	AluJr4
CAediting_437374	chr5_141464880_+	SINE	Alu	AluJr4
CAediting_437375	chr5_141464900_+	SINE	Alu	AluJr4
CAediting_437376	chr5_141464977_+	SINE	Alu	AluJr4
CAediting_437377	chr5_141464994_+	SINE	Alu	AluJr4
CAediting_437378	chr5_141465010_+	SINE	Alu	AluJr4
CAediting_437379	chr5_141465868_+	SINE	Alu	AluY
CAediting_437380	chr5_141466210_+	SINE	Alu	AluJb
CAediting_437381	chr5_141466283_+	SINE	Alu	AluJb
CAediting_437382	chr5_141466310_+	SINE	Alu	AluJb
CAediting_437383	chr5_141467122_+	SINE	Alu	AluSz
CAediting_437384	chr5_141467200_+	SINE	Alu	AluSz
CAediting_437385	chr5_141467287_+	SINE	Alu	AluSz
CAediting_437386	chr5_141467327_+	SINE	Alu	AluSz
CAediting_437387	chr5_141467336_+	SINE	Alu	AluSz
CAediting_437388	chr5_141467685_+	SINE	Alu	AluJb
CAediting_437389	chr5_141467712_+	SINE	Alu	AluJb
CAediting_437390	chr5_141467726_+	SINE	Alu	AluJb
CAediting_437391	chr5_141467731_+	SINE	Alu	AluJb
CAediting_437392	chr5_141467742_+	SINE	Alu	AluJb
CAediting_437393	chr5_141467762_+	SINE	Alu	AluJb
CAediting_437394	chr5_141467776_+	SINE	Alu	AluJb
CAediting_437395	chr5_141467784_+	SINE	Alu	AluJb
CAediting_437396	chr5_141467785_+	SINE	Alu	AluJb
CAediting_437397	chr5_141467788_+	SINE	Alu	AluJb
CAediting_437398	chr5_141467798_+	SINE	Alu	AluJb
CAediting_437399	chr5_141467800_+	SINE	Alu	AluJb
CAediting_437400	chr5_141467806_+	SINE	Alu	AluJb
CAediting_437401	chr5_141467811_+	SINE	Alu	AluJb
CAediting_437402	chr5_141467816_+	SINE	Alu	AluJb
CAediting_437403	chr5_141467856_+	SINE	Alu	AluJb
CAediting_437404	chr5_141467859_+	SINE	Alu	AluJb
CAediting_437405	chr5_141467879_+	SINE	Alu	AluJb
CAediting_437406	chr5_141467893_+	SINE	Alu	AluJb
CAediting_437407	chr5_141467894_+	SINE	Alu	AluJb
CAediting_437408	chr5_141467906_+	SINE	Alu	AluJb
CAediting_437409	chr5_141467911_+	SINE	Alu	AluJb
CAediting_437410	chr5_141467921_+	SINE	Alu	AluJb
CAediting_437411	chr5_141467927_+	SINE	Alu	AluJb
CAediting_437412	chr5_141467933_+	SINE	Alu	AluJb
CAediting_437413	chr5_141467936_+	SINE	Alu	AluJb
CAediting_437414	chr5_141467939_+	SINE	Alu	AluJb
CAediting_437415	chr5_141467951_+	SINE	Alu	AluJb
CAediting_437416	chr5_141468061_+	SINE	Alu	AluSq2
CAediting_437417	chr5_141468063_+	SINE	Alu	AluSq2
CAediting_437418	chr5_141468069_+	SINE	Alu	AluSq2
CAediting_437419	chr5_141468070_+	SINE	Alu	AluSq2
CAediting_437420	chr5_141468075_+	SINE	Alu	AluSq2
CAediting_437421	chr5_141468124_+	SINE	Alu	AluSq2
CAediting_437422	chr5_141468126_+	SINE	Alu	AluSq2
CAediting_437423	chr5_141468147_+	SINE	Alu	AluSq2
CAediting_437424	chr5_141468149_+	SINE	Alu	AluSq2
CAediting_437425	chr5_141468163_+	SINE	Alu	AluSq2
CAediting_437426	chr5_141468169_+	SINE	Alu	AluSq2
CAediting_437427	chr5_141468172_+	SINE	Alu	AluSq2
CAediting_437428	chr5_141468173_+	SINE	Alu	AluSq2
CAediting_437429	chr5_141468174_+	SINE	Alu	AluSq2
CAediting_437430	chr5_141468175_+	SINE	Alu	AluSq2
CAediting_437431	chr5_141468186_+	SINE	Alu	AluSq2
CAediting_437432	chr5_141468204_+	SINE	Alu	AluSq2
CAediting_437433	chr5_141468205_+	SINE	Alu	AluSq2
CAediting_437434	chr5_141468210_+	SINE	Alu	AluSq2
CAediting_437435	chr5_141468224_+	SINE	Alu	AluSq2
CAediting_437436	chr5_141468231_+	SINE	Alu	AluSq2
CAediting_437437	chr5_141468237_+	SINE	Alu	AluSq2
CAediting_437438	chr5_141468245_+	SINE	Alu	AluSq2
CAediting_437439	chr5_141468246_+	SINE	Alu	AluSq2
CAediting_437440	chr5_141468257_+	SINE	Alu	AluSq2
CAediting_437441	chr5_141468270_+	SINE	Alu	AluSq2
CAediting_437442	chr5_141468275_+	SINE	Alu	AluSq2
CAediting_437443	chr5_141468280_+	SINE	Alu	AluSq2
CAediting_437444	chr5_141468745_+	SINE	Alu	AluY
CAediting_437445	chr5_141469021_+	SINE	Alu	AluJo
CAediting_437446	chr5_141469022_+	SINE	Alu	AluJo
CAediting_437447	chr5_141469043_+	SINE	Alu	AluJo
CAediting_437448	chr5_141469086_+	SINE	Alu	AluJo
CAediting_437449	chr5_141469094_+	SINE	Alu	AluJo
CAediting_437450	chr5_141469118_+	SINE	Alu	AluJo
CAediting_437451	chr5_141469129_+	SINE	Alu	AluJo
CAediting_437452	chr5_141469133_+	SINE	Alu	AluJo
CAediting_437453	chr5_141469147_+	SINE	Alu	AluJo
CAediting_437454	chr5_141469155_+	SINE	Alu	AluJo
CAediting_437455	chr5_141469165_+	SINE	Alu	AluJo
CAediting_437456	chr5_141469182_+	SINE	Alu	AluJo
CAediting_437457	chr5_141469183_+	SINE	Alu	AluJo
CAediting_437458	chr5_141469196_+	SINE	Alu	AluJo
CAediting_437459	chr5_141469206_+	SINE	Alu	AluJo
CAediting_437460	chr5_141469232_+	SINE	Alu	AluJo
CAediting_437461	chr5_141469257_+	SINE	Alu	AluJo
CAediting_437462	chr5_141469264_+	SINE	Alu	AluJo
CAediting_437463	chr5_141469265_+	SINE	Alu	AluJo
CAediting_437464	chr5_141469313_+	SINE	Alu	AluSc
CAediting_437465	chr5_141469321_+	SINE	Alu	AluSc
CAediting_437466	chr5_141469322_+	SINE	Alu	AluSc
CAediting_437467	chr5_141469364_+	SINE	Alu	AluSc
CAediting_437468	chr5_141469454_+	SINE	Alu	AluSc
CAediting_437469	chr5_141469671_+	LINE	L1	L1MC5a
CAediting_437470	chr5_141469691_+	LINE	L1	L1MC5a
CAediting_437471	chr5_141469710_+	LINE	L1	L1MC5a
CAediting_437472	chr5_141469713_+	LINE	L1	L1MC5a
CAediting_437473	chr5_141469724_+	LINE	L1	L1MC5a
CAediting_437474	chr5_141469726_+	LINE	L1	L1MC5a
CAediting_437475	chr5_141469727_+	LINE	L1	L1MC5a
CAediting_437476	chr5_141469728_+	LINE	L1	L1MC5a
CAediting_437477	chr5_141469860_+	SINE	Alu	AluSx
CAediting_437478	chr5_141469893_+	SINE	Alu	AluSx
CAediting_437479	chr5_141469906_+	SINE	Alu	AluSx
CAediting_437480	chr5_141469921_+	SINE	Alu	AluSx
CAediting_437481	chr5_141470009_+	SINE	Alu	AluSx
CAediting_437482	chr5_141470050_+	SINE	Alu	AluSx
CAediting_437483	chr5_141470084_+	SINE	Alu	AluSx
CAediting_437484	chr5_141470092_+	SINE	Alu	AluSx
CAediting_437485	chr5_141470108_+	SINE	Alu	AluSx
CAediting_437486	chr5_141470765_+	SINE	Alu	AluJr
CAediting_437487	chr5_141470788_+	SINE	Alu	AluJr
CAediting_437488	chr5_141470792_+	SINE	Alu	AluJr
CAediting_437489	chr5_141470800_+	SINE	Alu	AluJr
CAediting_437490	chr5_141470821_+	SINE	Alu	AluJr
CAediting_437491	chr5_141470830_+	SINE	Alu	AluJr
CAediting_437492	chr5_141470937_+	SINE	Alu	AluJr
CAediting_437493	chr5_141470951_+	SINE	Alu	AluJr
CAediting_437494	chr5_141471150_+	SINE	Alu	AluSx1
CAediting_437495	chr5_141471234_+	SINE	Alu	AluSx1
CAediting_437496	chr5_141471251_+	SINE	Alu	AluSx1
CAediting_437497	chr5_141471294_+	SINE	Alu	AluSx1
CAediting_437498	chr5_141471325_+	SINE	Alu	AluSx1
CAediting_437499	chr5_141472364_+	SINE	Alu	AluSc8
CAediting_437500	chr5_141472387_+	SINE	Alu	AluSc8
CAediting_437501	chr5_141472461_+	SINE	Alu	AluSc8
CAediting_437502	chr5_141472465_+	SINE	Alu	AluSc8
CAediting_437503	chr5_141472724_+	SINE	Alu	AluSp
CAediting_437504	chr5_141472730_+	SINE	Alu	AluSp
CAediting_437505	chr5_141472731_+	SINE	Alu	AluSp
CAediting_437506	chr5_141472784_+	SINE	Alu	AluSp
CAediting_437507	chr5_141472785_+	SINE	Alu	AluSp
CAediting_437508	chr5_141472796_+	SINE	Alu	AluSp
CAediting_437509	chr5_141472809_+	SINE	Alu	AluSp
CAediting_437510	chr5_141472822_+	SINE	Alu	AluSp
CAediting_437511	chr5_141472825_+	SINE	Alu	AluSp
CAediting_437512	chr5_141472826_+	SINE	Alu	AluSp
CAediting_437513	chr5_141472829_+	SINE	Alu	AluSp
CAediting_437514	chr5_141472831_+	SINE	Alu	AluSp
CAediting_437515	chr5_141472839_+	SINE	Alu	AluSp
CAediting_437516	chr5_141472892_+	SINE	Alu	AluSp
CAediting_437517	chr5_141472898_+	SINE	Alu	AluSp
CAediting_437518	chr5_141472907_+	SINE	Alu	AluSp
CAediting_437519	chr5_141472911_+	SINE	Alu	AluSp
CAediting_437520	chr5_141472912_+	SINE	Alu	AluSp
CAediting_437521	chr5_141472935_+	SINE	Alu	AluSp
CAediting_437522	chr5_141472936_+	SINE	Alu	AluSp
CAediting_437523	chr5_141480318_+	SINE	Alu	AluJr
CAediting_437524	chr5_141480354_+	SINE	Alu	AluJr
CAediting_437525	chr5_141480378_+	SINE	Alu	AluJr
CAediting_437526	chr5_141480650_+	DNA	hAT-Charlie	MER5B
CAediting_437527	chr5_141480655_+	DNA	hAT-Charlie	MER5B
CAediting_437528	chr5_141480656_+	DNA	hAT-Charlie	MER5B
CAediting_437529	chr5_141480858_+	SINE	Alu	AluSx4
CAediting_437530	chr5_141480861_+	SINE	Alu	AluSx4
CAediting_437531	chr5_141480880_+	SINE	Alu	AluSx4
CAediting_437532	chr5_141480906_+	SINE	Alu	AluSx4
CAediting_437533	chr5_141480918_+	SINE	Alu	AluSx4
CAediting_437534	chr5_141480930_+	SINE	Alu	AluSx4
CAediting_437535	chr5_141480983_+	SINE	Alu	AluSx4
CAediting_437536	chr5_141480993_+	SINE	Alu	AluSx4
CAediting_437537	chr5_141481040_+	SINE	Alu	AluSx4
CAediting_437538	chr5_141481075_+	SINE	Alu	AluSx4
CAediting_437539	chr5_141481590_+	SINE	Alu	AluSq2
CAediting_437540	chr5_141481964_+	SINE	Alu	AluSq2
CAediting_437541	chr5_141481974_+	SINE	Alu	AluSq2
CAediting_437542	chr5_141482034_+	SINE	Alu	AluSq2
CAediting_437543	chr5_141483067_+	SINE	Alu	AluSx1
CAediting_437544	chr5_141503492_+	SINE	Alu	AluSx4
CAediting_437545	chr5_141503493_+	SINE	Alu	AluSx4
CAediting_437546	chr5_141503501_+	SINE	Alu	AluSx4
CAediting_437547	chr5_141503505_+	SINE	Alu	AluSx4
CAediting_437548	chr5_141504978_+	SINE	Alu	AluSx1
CAediting_437549	chr5_141504986_+	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for PCDHGA9

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000261934.2.PCDHGA9.

Correlation between RNA A-to-I editing and PSI for ENSG00000261934.2.PCDHGA9.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PCDHGA9

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PCDHGA9

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for PCDHGA9

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000261934.2	ENST00000573521	hsa-miR-605-3p	141512422	141512428	7mer-m8	141512408	141512429	140	-14.25
CAediting_688080	chr9_63819626_+	ENSG00000261934.2	ENST00000573521	hsa-miR-4477b	141511898	141511905	8mer-1a	141511884	141511905	140	-10.96
CAediting_1229415	chr17_67471547_+	ENSG00000261934.2	ENST00000573521	hsa-miR-548aa	141512927	141512933	7mer-m8	141512911	141512934	152	-9.35
CAediting_1351755	chr19_40282625_-	ENSG00000261934.2	ENST00000573521	hsa-miR-641	141512893	141512899	7mer-1a	141512877	141512899	155	-23.62
CAediting_77128	chr1_85133844_+	ENSG00000261934.2	ENST00000573521	hsa-miR-4423-3p	141511321	141511327	7mer-m8	141511308	141511328	140	-12.68
CAediting_468389	chr6_31355314_-	ENSG00000261934.2	ENST00000573521	hsa-miR-6891-5p	141511526	141511532	7mer-m8	141511515	141511533	157	-27.64
CAediting_468389	chr6_31355314_-	ENSG00000261934.2	ENST00000573521	hsa-miR-6891-5p	141511893	141511899	7mer-m8	141511886	141511903	159	-34.53
CAediting_468389	chr6_31355314_-	ENSG00000261934.2	ENST00000573521	hsa-miR-6891-5p	141511896	141511903	8mer-1a	141511886	141511903	159	-34.53

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1368054	chr19_46709310_-	ENSG00000261934.2	ENST00000573521	hsa-miR-320e	141512137	141512143	7mer-m8	141512127	141512144	142	-16.72
CAediting_468389	chr6_31355314_-	ENSG00000261934.2	ENST00000573521	hsa-miR-6891-5p	141512541	141512547	7mer-m8	141512531	141512548	143	-22.29
CAediting_468389	chr6_31355314_-	ENSG00000261934.2	ENST00000573521	hsa-miR-6891-5p	141511652	141511657	6mer	141511639	141511658	144	-25
CAediting_468389	chr6_31355314_-	ENSG00000261934.2	ENST00000573521	hsa-miR-6891-5p	141511705	141511711	7mer-m8	141511694	141511712	152	-26.21

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PCDHGA9

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000616887.1	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_437257	ENST00000616887.1	chr5_141405443_+	-850.60	-851.30	-850.60

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Relation with ADAR for PCDHGA9

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for PCDHGA9

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for PCDHGA9

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for PCDHGA9

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for PCDHGA9

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene