CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CTTNBP2NL (CAeditome ID:55917)

Gene summary for CTTNBP2NL

check button Gene summary
Gene informationGene symbol

CTTNBP2NL

Gene ID

55917

Gene nameCTTNBP2 N-terminal like
Synonyms-
Cytomap

1p13.2

Type of geneprotein-coding
DescriptionCTTNBP2 N-terminal-like protein
Modification date20210518
UniProtAcc

Q9P2B4

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CTTNBP2NL

GO:0051721

CTTNBP2 N-terminal-like protein

24218568

CTTNBP2NL

GO:0015629

CTTNBP2 N-terminal-like protein

0000054


Top

RNA A-to-I events for CTTNBP2NL

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000143079.13

check button RNA A-to-I editing events in Cancer.
CAediting_87284(112399066, +), CAediting_87285(112399137, +), CAediting_87286(112399142, +), CAediting_87287(112399172, +), CAediting_87288(112399198, +), CAediting_87289(112399199, +), CAediting_87290(112399212, +), CAediting_87291(112400671, +), CAediting_87292(112400742, +), CAediting_87293(112400844, +), CAediting_87294(112400858, +), CAediting_87295(112400862, +), CAediting_87296(112402367, +), CAediting_87297(112404904, +), CAediting_87298(112404908, +), CAediting_87299(112405321, +), CAediting_87300(112405398, +), CAediting_87301(112408012, +), CAediting_87302(112408013, +), CAediting_87303(112408869, +), CAediting_87304(112408917, +), CAediting_87305(112408925, +), CAediting_87306(112408967, +), CAediting_87307(112408969, +), CAediting_87308(112408972, +), CAediting_87309(112408981, +), CAediting_87310(112408994, +), CAediting_87311(112409001, +), CAediting_87312(112409007, +), CAediting_87313(112409013, +), CAediting_87314(112409017, +), CAediting_87315(112409021, +), CAediting_87316(112409047, +), CAediting_87317(112409078, +), CAediting_87318(112410306, +), CAediting_87319(112411800, +), CAediting_87320(112412665, +), CAediting_87321(112412853, +), CAediting_87322(112412854, +), CAediting_87323(112414201, +), CAediting_87324(112414204, +), CAediting_87325(112414244, +), CAediting_87326(112414245, +), CAediting_87327(112414266, +), CAediting_87328(112414309, +), CAediting_87329(112414315, +), CAediting_87330(112414316, +), CAediting_87331(112414939, +), CAediting_87332(112415080, +), CAediting_87333(112415093, +), CAediting_87334(112415111, +), CAediting_87335(112415116, +), CAediting_87336(112415610, +), CAediting_87337(112415657, +), CAediting_87338(112415674, +), CAediting_87339(112416562, +), CAediting_87340(112416744, +), CAediting_87341(112416754, +), CAediting_87342(112421160, +), CAediting_87343(112421184, +), CAediting_87344(112421261, +), CAediting_87345(112421262, +), CAediting_87346(112422824, +), CAediting_87347(112422846, +), CAediting_87348(112422904, +), CAediting_87349(112422932, +), CAediting_87350(112422934, +), CAediting_87351(112422940, +), CAediting_87352(112422942, +), CAediting_87353(112422980, +), CAediting_87354(112423028, +), CAediting_87355(112424841, +), CAediting_87356(112424941, +), CAediting_87357(112424945, +), CAediting_87358(112424949, +), CAediting_87359(112425221, +), CAediting_87360(112425269, +), CAediting_87361(112425306, +), CAediting_87362(112425309, +), CAediting_87363(112425364, +), CAediting_87364(112425412, +), CAediting_87365(112425416, +), CAediting_87366(112425442, +), CAediting_87367(112425609, +), CAediting_87368(112425648, +), CAediting_87369(112425649, +), CAediting_87370(112425662, +), CAediting_87371(112425663, +), CAediting_87372(112425668, +), CAediting_87373(112425706, +), CAediting_87374(112425716, +), CAediting_87375(112425724, +), CAediting_87376(112425729, +), CAediting_87377(112425742, +), CAediting_87378(112425743, +), CAediting_87379(112425755, +), CAediting_87380(112425814, +), CAediting_87381(112425815, +), CAediting_87382(112426418, +), CAediting_87383(112426420, +), CAediting_87384(112426430, +), CAediting_87385(112426437, +), CAediting_87386(112426442, +), CAediting_87387(112426445, +), CAediting_87388(112426450, +), CAediting_87389(112426458, +), CAediting_87390(112426459, +), CAediting_87391(112426463, +), CAediting_87392(112426472, +), CAediting_87393(112426478, +), CAediting_87394(112426514, +), CAediting_87395(112426521, +), CAediting_87396(112426748, +), CAediting_87397(112426808, +), CAediting_87398(112426820, +), CAediting_87399(112426858, +), CAediting_87400(112426868, +), CAediting_87401(112427632, +), CAediting_87402(112427638, +), CAediting_87403(112427749, +), CAediting_87404(112433450, +), CAediting_87405(112433473, +), CAediting_87406(112433485, +), CAediting_87407(112433498, +), CAediting_87408(112433541, +), CAediting_87409(112433579, +), CAediting_87410(112434933, +), CAediting_87411(112434957, +), CAediting_87412(112434964, +), CAediting_87413(112434965, +), CAediting_87414(112434967, +), CAediting_87415(112434983, +), CAediting_87416(112434996, +), CAediting_87417(112435012, +), CAediting_87418(112435022, +), CAediting_87419(112435023, +), CAediting_87420(112435028, +), CAediting_87421(112435049, +), CAediting_87422(112435058, +), CAediting_87423(112435064, +), CAediting_87424(112435068, +), CAediting_87425(112435075, +), CAediting_87426(112435088, +), CAediting_87427(112435100, +), CAediting_87428(112446259, +), CAediting_87429(112446260, +), CAediting_87430(112446291, +), CAediting_87431(112446321, +), CAediting_87432(112446603, +), CAediting_87433(112446604, +), CAediting_87434(112446608, +), CAediting_87435(112446616, +), CAediting_87436(112446622, +), CAediting_87437(112446644, +), CAediting_87438(112446692, +), CAediting_87439(112446696, +), CAediting_87440(112446712, +), CAediting_87441(112446716, +), CAediting_87442(112446739, +), CAediting_87443(112446812, +), CAediting_87444(112446997, +), CAediting_87445(112447011, +), CAediting_87446(112447020, +), CAediting_87447(112447096, +), CAediting_87448(112447114, +), CAediting_87449(112447115, +), CAediting_87450(112447127, +), CAediting_87451(112447153, +), CAediting_87452(112447159, +), CAediting_87453(112447163, +), CAediting_87454(112452665, +), CAediting_87455(112452704, +), CAediting_87456(112452705, +), CAediting_87457(112453497, +), CAediting_87458(112458700, +), CAediting_87459(112458733, +), CAediting_87460(112458741, +), CAediting_87461(112458773, +), CAediting_87462(112458820, +),

Top

RNA editing positional annotations for CTTNBP2NL using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_87284chr1_112399066_+intronic
CAediting_87285chr1_112399137_+intronic
CAediting_87286chr1_112399142_+intronic
CAediting_87287chr1_112399172_+intronic
CAediting_87288chr1_112399198_+intronic
CAediting_87289chr1_112399199_+intronic
CAediting_87290chr1_112399212_+intronic
CAediting_87291chr1_112400671_+intronic
CAediting_87292chr1_112400742_+intronic
CAediting_87293chr1_112400844_+intronic
CAediting_87294chr1_112400858_+intronic
CAediting_87295chr1_112400862_+intronic
CAediting_87296chr1_112402367_+intronic
CAediting_87297chr1_112404904_+intronic
CAediting_87298chr1_112404908_+intronic
CAediting_87299chr1_112405321_+intronic
CAediting_87300chr1_112405398_+intronic
CAediting_87301chr1_112408012_+intronic
CAediting_87302chr1_112408013_+intronic
CAediting_87303chr1_112408869_+intronic
CAediting_87304chr1_112408917_+intronic
CAediting_87305chr1_112408925_+intronic
CAediting_87306chr1_112408967_+intronic
CAediting_87307chr1_112408969_+intronic
CAediting_87308chr1_112408972_+intronic
CAediting_87309chr1_112408981_+intronic
CAediting_87310chr1_112408994_+intronic
CAediting_87311chr1_112409001_+intronic
CAediting_87312chr1_112409007_+intronic
CAediting_87313chr1_112409013_+intronic
CAediting_87314chr1_112409017_+intronic
CAediting_87315chr1_112409021_+intronic
CAediting_87316chr1_112409047_+intronic
CAediting_87317chr1_112409078_+intronic
CAediting_87318chr1_112410306_+intronic
CAediting_87319chr1_112411800_+intronic
CAediting_87320chr1_112412665_+intronic
CAediting_87321chr1_112412853_+intronic
CAediting_87322chr1_112412854_+intronic
CAediting_87323chr1_112414201_+intronic
CAediting_87324chr1_112414204_+intronic
CAediting_87325chr1_112414244_+intronic
CAediting_87326chr1_112414245_+intronic
CAediting_87327chr1_112414266_+intronic
CAediting_87328chr1_112414309_+intronic
CAediting_87329chr1_112414315_+intronic
CAediting_87330chr1_112414316_+intronic
CAediting_87331chr1_112414939_+ncRNA_intronic
CAediting_87332chr1_112415080_+ncRNA_intronic
CAediting_87333chr1_112415093_+ncRNA_intronic
CAediting_87334chr1_112415111_+ncRNA_intronic
CAediting_87335chr1_112415116_+ncRNA_intronic
CAediting_87336chr1_112415610_+ncRNA_intronic
CAediting_87337chr1_112415657_+ncRNA_intronic
CAediting_87338chr1_112415674_+ncRNA_intronic
CAediting_87339chr1_112416562_+intronic
CAediting_87340chr1_112416744_+intronic
CAediting_87341chr1_112416754_+intronic
CAediting_87342chr1_112421160_+intronic
CAediting_87343chr1_112421184_+intronic
CAediting_87344chr1_112421261_+intronic
CAediting_87345chr1_112421262_+intronic
CAediting_87346chr1_112422824_+intronic
CAediting_87347chr1_112422846_+intronic
CAediting_87348chr1_112422904_+intronic
CAediting_87349chr1_112422932_+intronic
CAediting_87350chr1_112422934_+intronic
CAediting_87351chr1_112422940_+intronic
CAediting_87352chr1_112422942_+intronic
CAediting_87353chr1_112422980_+intronic
CAediting_87354chr1_112423028_+intronic
CAediting_87355chr1_112424841_+intronic
CAediting_87356chr1_112424941_+intronic
CAediting_87357chr1_112424945_+intronic
CAediting_87358chr1_112424949_+intronic
CAediting_87359chr1_112425221_+intronic
CAediting_87360chr1_112425269_+intronic
CAediting_87361chr1_112425306_+intronic
CAediting_87362chr1_112425309_+intronic
CAediting_87363chr1_112425364_+intronic
CAediting_87364chr1_112425412_+intronic
CAediting_87365chr1_112425416_+intronic
CAediting_87366chr1_112425442_+intronic
CAediting_87367chr1_112425609_+intronic
CAediting_87368chr1_112425648_+intronic
CAediting_87369chr1_112425649_+intronic
CAediting_87370chr1_112425662_+intronic
CAediting_87371chr1_112425663_+intronic
CAediting_87372chr1_112425668_+intronic
CAediting_87373chr1_112425706_+intronic
CAediting_87374chr1_112425716_+intronic
CAediting_87375chr1_112425724_+intronic
CAediting_87376chr1_112425729_+intronic
CAediting_87377chr1_112425742_+intronic
CAediting_87378chr1_112425743_+intronic
CAediting_87379chr1_112425755_+intronic
CAediting_87380chr1_112425814_+intronic
CAediting_87381chr1_112425815_+intronic
CAediting_87382chr1_112426418_+intronic
CAediting_87383chr1_112426420_+intronic
CAediting_87384chr1_112426430_+intronic
CAediting_87385chr1_112426437_+intronic
CAediting_87386chr1_112426442_+intronic
CAediting_87387chr1_112426445_+intronic
CAediting_87388chr1_112426450_+intronic
CAediting_87389chr1_112426458_+intronic
CAediting_87390chr1_112426459_+intronic
CAediting_87391chr1_112426463_+intronic
CAediting_87392chr1_112426472_+intronic
CAediting_87393chr1_112426478_+intronic
CAediting_87394chr1_112426514_+intronic
CAediting_87395chr1_112426521_+intronic
CAediting_87396chr1_112426748_+intronic
CAediting_87397chr1_112426808_+intronic
CAediting_87398chr1_112426820_+intronic
CAediting_87399chr1_112426858_+intronic
CAediting_87400chr1_112426868_+intronic
CAediting_87401chr1_112427632_+intronic
CAediting_87402chr1_112427638_+intronic
CAediting_87403chr1_112427749_+intronic
CAediting_87404chr1_112433450_+intronic
CAediting_87405chr1_112433473_+intronic
CAediting_87406chr1_112433485_+intronic
CAediting_87407chr1_112433498_+intronic
CAediting_87408chr1_112433541_+intronic
CAediting_87409chr1_112433579_+intronic
CAediting_87410chr1_112434933_+intronic
CAediting_87411chr1_112434957_+intronic
CAediting_87412chr1_112434964_+intronic
CAediting_87413chr1_112434965_+intronic
CAediting_87414chr1_112434967_+intronic
CAediting_87415chr1_112434983_+intronic
CAediting_87416chr1_112434996_+intronic
CAediting_87417chr1_112435012_+intronic
CAediting_87418chr1_112435022_+intronic
CAediting_87419chr1_112435023_+intronic
CAediting_87420chr1_112435028_+intronic
CAediting_87421chr1_112435049_+intronic
CAediting_87422chr1_112435058_+intronic
CAediting_87423chr1_112435064_+intronic
CAediting_87424chr1_112435068_+intronic
CAediting_87425chr1_112435075_+intronic
CAediting_87426chr1_112435088_+intronic
CAediting_87427chr1_112435100_+intronic
CAediting_87428chr1_112446259_+intronic
CAediting_87429chr1_112446260_+intronic
CAediting_87430chr1_112446291_+intronic
CAediting_87431chr1_112446321_+intronic
CAediting_87432chr1_112446603_+intronic
CAediting_87433chr1_112446604_+intronic
CAediting_87434chr1_112446608_+intronic
CAediting_87435chr1_112446616_+intronic
CAediting_87436chr1_112446622_+intronic
CAediting_87437chr1_112446644_+intronic
CAediting_87438chr1_112446692_+intronic
CAediting_87439chr1_112446696_+intronic
CAediting_87440chr1_112446712_+intronic
CAediting_87441chr1_112446716_+intronic
CAediting_87442chr1_112446739_+intronic
CAediting_87443chr1_112446812_+intronic
CAediting_87444chr1_112446997_+intronic
CAediting_87445chr1_112447011_+intronic
CAediting_87446chr1_112447020_+intronic
CAediting_87447chr1_112447096_+intronic
CAediting_87448chr1_112447114_+intronic
CAediting_87449chr1_112447115_+intronic
CAediting_87450chr1_112447127_+intronic
CAediting_87451chr1_112447153_+intronic
CAediting_87452chr1_112447159_+intronic
CAediting_87453chr1_112447163_+intronic
CAediting_87454chr1_112452665_+intronic
CAediting_87455chr1_112452704_+intronic
CAediting_87456chr1_112452705_+intronic
CAediting_87457chr1_112453497_+intronic
CAediting_87458chr1_112458700_+ncRNA_intronic
CAediting_87459chr1_112458733_+ncRNA_intronic
CAediting_87460chr1_112458741_+ncRNA_intronic
CAediting_87461chr1_112458773_+ncRNA_intronic
CAediting_87462chr1_112458820_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_87284chr1_112399066_+SINEAluAluSx3
CAediting_87285chr1_112399137_+SINEAluAluSx3
CAediting_87286chr1_112399142_+SINEAluAluSx3
CAediting_87287chr1_112399172_+SINEAluAluSx3
CAediting_87288chr1_112399198_+SINEAluAluSx3
CAediting_87289chr1_112399199_+SINEAluAluSx3
CAediting_87290chr1_112399212_+SINEAluAluSx3
CAediting_87291chr1_112400671_+SINEAluAluSp
CAediting_87292chr1_112400742_+SINEAluAluSp
CAediting_87293chr1_112400844_+SINEAluAluSz6
CAediting_87294chr1_112400858_+SINEAluAluSz6
CAediting_87295chr1_112400862_+SINEAluAluSz6
CAediting_87296chr1_112402367_+SINEAluAluSp
CAediting_87297chr1_112404904_+SINEAluAluSp
CAediting_87298chr1_112404908_+SINEAluAluSp
CAediting_87299chr1_112405321_+SINEAluAluSx
CAediting_87300chr1_112405398_+SINEAluAluSx
CAediting_87301chr1_112408012_+SINEAluAluJb
CAediting_87302chr1_112408013_+SINEAluAluJb
CAediting_87303chr1_112408869_+SINEAluAluSz
CAediting_87304chr1_112408917_+SINEAluAluSz
CAediting_87305chr1_112408925_+SINEAluAluSz
CAediting_87306chr1_112408967_+SINEAluAluSz
CAediting_87307chr1_112408969_+SINEAluAluSz
CAediting_87308chr1_112408972_+SINEAluAluSz
CAediting_87309chr1_112408981_+SINEAluAluSz
CAediting_87310chr1_112408994_+SINEAluAluSz
CAediting_87311chr1_112409001_+SINEAluAluSz
CAediting_87312chr1_112409007_+SINEAluAluSz
CAediting_87313chr1_112409013_+SINEAluAluSz
CAediting_87314chr1_112409017_+SINEAluAluSz
CAediting_87315chr1_112409021_+SINEAluAluSz
CAediting_87316chr1_112409047_+SINEAluAluSz
CAediting_87317chr1_112409078_+SINEAluAluSz
CAediting_87318chr1_112410306_+SINEAluAluSp
CAediting_87319chr1_112411800_+SINEAluAluYh3
CAediting_87320chr1_112412665_+SINEAluAluSz
CAediting_87321chr1_112412853_+SINEAluAluSz
CAediting_87322chr1_112412854_+SINEAluAluSz
CAediting_87323chr1_112414201_+SINEAluAluSx1
CAediting_87324chr1_112414204_+SINEAluAluSx1
CAediting_87325chr1_112414244_+SINEAluAluSx1
CAediting_87326chr1_112414245_+SINEAluAluSx1
CAediting_87327chr1_112414266_+SINEAluAluSx1
CAediting_87328chr1_112414309_+SINEAluAluSx1
CAediting_87329chr1_112414315_+SINEAluAluSx1
CAediting_87330chr1_112414316_+SINEAluAluSx1
CAediting_87331chr1_112414939_+SINEAluAluJb
CAediting_87332chr1_112415080_+SINEAluAluJb
CAediting_87333chr1_112415093_+SINEAluAluJb
CAediting_87334chr1_112415111_+SINEAluAluJb
CAediting_87335chr1_112415116_+SINEAluAluJb
CAediting_87336chr1_112415610_+SINEAluAluSx3
CAediting_87337chr1_112415657_+SINEAluAluSx3
CAediting_87338chr1_112415674_+SINEAluAluSx3
CAediting_87339chr1_112416562_+SINEAluAluSc
CAediting_87340chr1_112416744_+SINEAluAluSc
CAediting_87341chr1_112416754_+SINEAluAluSc
CAediting_87342chr1_112421160_+SINEAluFLAM_C
CAediting_87343chr1_112421184_+SINEAluFLAM_C
CAediting_87346chr1_112422824_+SINEAluAluJr
CAediting_87347chr1_112422846_+SINEAluAluJr
CAediting_87348chr1_112422904_+SINEAluAluJr
CAediting_87349chr1_112422932_+SINEAluAluJr
CAediting_87350chr1_112422934_+SINEAluAluJr
CAediting_87351chr1_112422940_+SINEAluAluJr
CAediting_87352chr1_112422942_+SINEAluAluJr
CAediting_87353chr1_112422980_+SINEAluAluJr
CAediting_87354chr1_112423028_+SINEAluAluJr
CAediting_87355chr1_112424841_+SINEAluAluJb
CAediting_87356chr1_112424941_+SINEAluAluJb
CAediting_87357chr1_112424945_+SINEAluAluJb
CAediting_87358chr1_112424949_+SINEAluAluJb
CAediting_87359chr1_112425221_+SINEAluAluSx
CAediting_87360chr1_112425269_+SINEAluAluSx
CAediting_87361chr1_112425306_+SINEAluAluSx
CAediting_87362chr1_112425309_+SINEAluAluSx
CAediting_87363chr1_112425364_+SINEAluAluSx
CAediting_87364chr1_112425412_+SINEAluAluSx
CAediting_87365chr1_112425416_+SINEAluAluSx
CAediting_87366chr1_112425442_+SINEAluAluSx
CAediting_87367chr1_112425609_+SINEAluAluJb
CAediting_87368chr1_112425648_+SINEAluAluJb
CAediting_87369chr1_112425649_+SINEAluAluJb
CAediting_87370chr1_112425662_+SINEAluAluJb
CAediting_87371chr1_112425663_+SINEAluAluJb
CAediting_87372chr1_112425668_+SINEAluAluJb
CAediting_87373chr1_112425706_+SINEAluAluJb
CAediting_87374chr1_112425716_+SINEAluAluJb
CAediting_87375chr1_112425724_+SINEAluAluJb
CAediting_87376chr1_112425729_+SINEAluAluJb
CAediting_87377chr1_112425742_+SINEAluAluJb
CAediting_87378chr1_112425743_+SINEAluAluJb
CAediting_87379chr1_112425755_+SINEAluAluJb
CAediting_87380chr1_112425814_+SINEAluAluJb
CAediting_87381chr1_112425815_+SINEAluAluJb
CAediting_87382chr1_112426418_+SINEAluFLAM_C
CAediting_87383chr1_112426420_+SINEAluFLAM_C
CAediting_87384chr1_112426430_+SINEAluFLAM_C
CAediting_87385chr1_112426437_+SINEAluFLAM_C
CAediting_87386chr1_112426442_+SINEAluFLAM_C
CAediting_87387chr1_112426445_+SINEAluFLAM_C
CAediting_87388chr1_112426450_+SINEAluFLAM_C
CAediting_87389chr1_112426458_+SINEAluFLAM_C
CAediting_87390chr1_112426459_+SINEAluFLAM_C
CAediting_87391chr1_112426463_+SINEAluFLAM_C
CAediting_87392chr1_112426472_+SINEAluFLAM_C
CAediting_87393chr1_112426478_+SINEAluFLAM_C
CAediting_87394chr1_112426514_+SINEAluFLAM_C
CAediting_87395chr1_112426521_+SINEAluFLAM_C
CAediting_87396chr1_112426748_+SINEAluAluSx1
CAediting_87397chr1_112426808_+SINEAluAluSx1
CAediting_87398chr1_112426820_+SINEAluAluSx1
CAediting_87399chr1_112426858_+SINEAluAluSx1
CAediting_87400chr1_112426868_+SINEAluAluSx1
CAediting_87401chr1_112427632_+SINEAluAluSc8
CAediting_87402chr1_112427638_+SINEAluAluSc8
CAediting_87403chr1_112427749_+SINEAluAluSc8
CAediting_87404chr1_112433450_+SINEAluAluSz
CAediting_87405chr1_112433473_+SINEAluAluSz
CAediting_87406chr1_112433485_+SINEAluAluSz
CAediting_87407chr1_112433498_+SINEAluAluSz
CAediting_87408chr1_112433541_+SINEAluAluSz
CAediting_87409chr1_112433579_+SINEAluAluSz
CAediting_87410chr1_112434933_+SINEAluAluSx
CAediting_87411chr1_112434957_+SINEAluAluSx
CAediting_87412chr1_112434964_+SINEAluAluSx
CAediting_87413chr1_112434965_+SINEAluAluSx
CAediting_87414chr1_112434967_+SINEAluAluSx
CAediting_87415chr1_112434983_+SINEAluAluSx
CAediting_87416chr1_112434996_+SINEAluAluSx
CAediting_87417chr1_112435012_+SINEAluAluSx
CAediting_87418chr1_112435022_+SINEAluAluSx
CAediting_87419chr1_112435023_+SINEAluAluSx
CAediting_87420chr1_112435028_+SINEAluAluSx
CAediting_87421chr1_112435049_+SINEAluAluSx
CAediting_87422chr1_112435058_+SINEAluAluSx
CAediting_87423chr1_112435064_+SINEAluAluSx
CAediting_87424chr1_112435068_+SINEAluAluSx
CAediting_87425chr1_112435075_+SINEAluAluSx
CAediting_87426chr1_112435088_+SINEAluAluSx
CAediting_87427chr1_112435100_+SINEAluAluSx
CAediting_87428chr1_112446259_+SINEAluAluJb
CAediting_87429chr1_112446260_+SINEAluAluJb
CAediting_87430chr1_112446291_+SINEAluAluJb
CAediting_87431chr1_112446321_+SINEAluAluJb
CAediting_87432chr1_112446603_+SINEAluAluJo
CAediting_87433chr1_112446604_+SINEAluAluJo
CAediting_87434chr1_112446608_+SINEAluAluJo
CAediting_87435chr1_112446616_+SINEAluAluJo
CAediting_87436chr1_112446622_+SINEAluAluJo
CAediting_87437chr1_112446644_+SINEAluAluJo
CAediting_87438chr1_112446692_+SINEAluAluJo
CAediting_87439chr1_112446696_+SINEAluAluJo
CAediting_87440chr1_112446712_+SINEAluAluJo
CAediting_87441chr1_112446716_+SINEAluAluJo
CAediting_87442chr1_112446739_+SINEAluAluJo
CAediting_87443chr1_112446812_+SINEAluAluJo
CAediting_87444chr1_112446997_+SINEAluAluY
CAediting_87445chr1_112447011_+SINEAluAluY
CAediting_87446chr1_112447020_+SINEAluAluY
CAediting_87447chr1_112447096_+SINEAluAluY
CAediting_87448chr1_112447114_+SINEAluAluY
CAediting_87449chr1_112447115_+SINEAluAluY
CAediting_87450chr1_112447127_+SINEAluAluY
CAediting_87451chr1_112447153_+SINEAluAluY
CAediting_87452chr1_112447159_+SINEAluAluY
CAediting_87453chr1_112447163_+SINEAluAluY
CAediting_87454chr1_112452665_+SINEAluAluJb
CAediting_87455chr1_112452704_+SINEAluAluJb
CAediting_87456chr1_112452705_+SINEAluAluJb
CAediting_87457chr1_112453497_+SINEAluAluJb
CAediting_87458chr1_112458700_+SINEAluAluJr
CAediting_87459chr1_112458733_+SINEAluAluJr
CAediting_87460chr1_112458741_+SINEAluAluJr
CAediting_87461chr1_112458773_+SINEAluAluJr
CAediting_87462chr1_112458820_+SINEAluAluJr

Top

RNA A-to-I editing events in the alternative splicing sites for CTTNBP2NL

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000143079.13.CTTNBP2NL.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000143079.13.CTTNBP2NL.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for CTTNBP2NL

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for CTTNBP2NL

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for CTTNBP2NL

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_87459chr1_112458733_+ENSG00000143079.13ENST00000271277hsa-miR-361-3p1124587281124587336mer112458713112458734141.00-25.95
CAediting_87459chr1_112458733_+ENSG00000143079.13ENST00000271277hsa-miR-39431124587301124587367mer-m8112458715112458737140.00-19.21
CAediting_87460chr1_112458741_+ENSG00000143079.13ENST00000271277hsa-miR-1224-3p1124587381124587458mer-1a112458726112458745156.00-26.75
CAediting_87460chr1_112458741_+ENSG00000143079.13ENST00000271277hsa-miR-1260a1124587391124587457mer-m8112458729112458746164.00-28.81
CAediting_87460chr1_112458741_+ENSG00000143079.13ENST00000271277hsa-miR-1260b1124587391124587457mer-m8112458728112458746161.00-23.52
CAediting_87461chr1_112458773_+ENSG00000143079.13ENST00000271277hsa-miR-31761124587701124587767mer-m8112458760112458777159.00-22.77
CAediting_87461chr1_112458773_+ENSG00000143079.13ENST00000271277hsa-miR-3922-3p1124587701124587767mer-m8112458752112458777158.00-24.21
CAediting_87462chr1_112458820_+ENSG00000143079.13ENST00000271277hsa-miR-24-1-5p1124588181124588258mer-1a112458804112458825142.00-16.28
CAediting_87462chr1_112458820_+ENSG00000143079.13ENST00000271277hsa-miR-24-2-5p1124588181124588258mer-1a112458804112458825142.00-16.10

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_87459chr1_112458733_+ENSG00000143079.13ENST00000271277hsa-miR-150-5p1124587271124587337mer-m8112458713112458734140-15.29
CAediting_87458chr1_112458700_+ENSG00000143079.13ENST00000271277hsa-miR-42521124586981124587047mer-m8112458687112458705150-18.77
CAediting_87458chr1_112458700_+ENSG00000143079.13ENST00000271277hsa-miR-550b-2-5p1124586931124586997mer-m8112458680112458700146-16.66
CAediting_87458chr1_112458700_+ENSG00000143079.13ENST00000271277hsa-miR-550b-2-5p1124586931124586997mer-m8112458680112458700146-16.66
CAediting_87461chr1_112458773_+ENSG00000143079.13ENST00000271277hsa-miR-61311124587711124587777mer-m8112458760112458778140-17.94
CAediting_87458chr1_112458700_+ENSG00000143079.13ENST00000271277hsa-miR-6529-3p1124586941124587007mer-m8112458679112458701153-16.98
CAediting_87459chr1_112458733_+ENSG00000143079.13ENST00000271277hsa-miR-6778-3p1124587291124587357mer-m8112458716112458736143-14.6
CAediting_87458chr1_112458700_+ENSG00000143079.13ENST00000271277hsa-miR-6889-3p1124586941124587007mer-m8112458680112458701143-17.43

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000143079.13ENST00000271277hsa-miR-200b-3p1124607971124608037mer-m8112460783112460804140-11.16
CAediting_1229415chr17_67471547_+ENSG00000143079.13ENST00000271277hsa-miR-548aa1124603331124603397mer-m8112460316112460340159-18.43
CAediting_1351755chr19_40282625_-ENSG00000143079.13ENST00000271277hsa-miR-6411124576351124576428mer-1a112457619112457642140-15.25
CAediting_1351755chr19_40282625_-ENSG00000143079.13ENST00000271277hsa-miR-6411124581621124581698mer-1a112458142112458169144-13.48
CAediting_86358chr1_109598906_+ENSG00000143079.13ENST00000271277hsa-miR-197-5p1124611011124611088mer-1a112461086112461108152-20.98
CAediting_77128chr1_85133844_+ENSG00000143079.13ENST00000271277hsa-miR-4423-3p1124589421124589498mer-1a112458929112458949140-12.47
CAediting_442554chr5_154685830_+ENSG00000143079.13ENST00000271277hsa-miR-13031124583671124583737mer-m8112458353112458374151-12.81

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_524911chr7_5495852_-ENSG00000143079.13ENST00000271277hsa-miR-589-3p1124606311124606377mer-m8112460614112460638151-14.03
CAediting_524911chr7_5495852_-ENSG00000143079.13ENST00000271277hsa-miR-589-3p1124579501124579578mer-1a112457933112457957152-15.39

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for CTTNBP2NL

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000271277.9protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_87458ENST00000271277.9chr1_112458700_+-1613.50-1609.80-1612.00
CAediting_87459ENST00000271277.9chr1_112458733_+-1608.90-1609.80-1612.00
CAediting_87460ENST00000271277.9chr1_112458741_+-1609.20-1609.80-1612.00
CAediting_87461ENST00000271277.9chr1_112458773_+-1609.20-1609.80-1612.00
CAediting_87462ENST00000271277.9chr1_112458820_+-1610.40-1609.80-1612.00

Top

Relation with ADAR for CTTNBP2NL

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

Top

Relation with cancer stages for CTTNBP2NL

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
STADpathologic_stageCAediting_87388chr1_112426450_+0.01298708919366880.240577065701281

Top

Relation with survival for CTTNBP2NL

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

Top

RelatedDrugs for CTTNBP2NL

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for CTTNBP2NL

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
CTTNBP2NLC0023893Liver Cirrhosis, Experimental1CTD_human