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Editing gene: DCAF6 (CAeditome ID:55827)

Gene summary for DCAF6

Gene summary

Gene information	Gene symbol	DCAF6
	Gene ID	55827
	Gene name	DDB1 and CUL4 associated factor 6
	Synonyms	1200006M05Rik\|ARCAP\|IQWD1\|MSTP055\|NRIP\|PC326
	Cytomap	1q24.2
	Type of gene	protein-coding
	Description	DDB1- and CUL4-associated factor 6IQ motif and WD repeat-containing protein 1IQ motif and WD repeats 1androgen receptor complex-associated proteinnuclear receptor interaction protein
	Modification date	20210518
	UniProtAcc	Q58WW2
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
DCAF6	GO:0030374	DDB1- and CUL4-associated factor 6	15784617
DCAF6	GO:0005634	DDB1- and CUL4-associated factor 6	15784617
DCAF6	GO:0005654	DDB1- and CUL4-associated factor 6	0000052
DCAF6	GO:0005829	DDB1- and CUL4-associated factor 6	0000052
DCAF6	GO:0005925	DDB1- and CUL4-associated factor 6	0000052
DCAF6	GO:0080008	DDB1- and CUL4-associated factor 6	16949367

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RNA A-to-I events for DCAF6

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000143164.14

RNA A-to-I editing events in Cancer.

CAediting_119524(167939552, +), CAediting_119525(167944049, +), CAediting_119526(167949385, +), CAediting_119527(167962900, +), CAediting_119528(167962901, +), CAediting_119529(167963123, +), CAediting_119530(167963494, +), CAediting_119531(167963510, +), CAediting_119532(167963515, +), CAediting_119533(167963534, +), CAediting_119534(167963612, +), CAediting_119535(167963664, +), CAediting_119536(167969800, +), CAediting_119537(167969902, +), CAediting_119538(167969904, +), CAediting_119539(167969906, +), CAediting_119540(167969911, +), CAediting_119541(167969916, +), CAediting_119542(167969919, +), CAediting_119543(167970387, +), CAediting_119544(167970393, +), CAediting_119545(167970450, +), CAediting_119546(167970456, +), CAediting_119547(167970464, +), CAediting_119548(167970470, +), CAediting_119549(167970527, +), CAediting_119550(167975607, +), CAediting_119551(167975675, +), CAediting_119552(167975691, +), CAediting_119553(167975822, +), CAediting_119554(167976219, +), CAediting_119555(167976349, +), CAediting_119556(167978710, +), CAediting_119557(167979701, +), CAediting_119558(167981127, +), CAediting_119559(167981145, +), CAediting_119560(167988191, +), CAediting_119561(167988364, +), CAediting_119562(167988826, +), CAediting_119563(167988919, +), CAediting_119564(167988933, +), CAediting_119565(167990307, +), CAediting_119566(168011216, +), CAediting_119567(168011233, +), CAediting_119568(168011298, +), CAediting_119569(168011377, +), CAediting_119570(168011378, +), CAediting_119571(168011700, +), CAediting_119572(168011723, +), CAediting_119573(168011728, +), CAediting_119574(168011739, +), CAediting_119575(168011792, +), CAediting_119576(168011794, +), CAediting_119577(168011800, +), CAediting_119578(168011852, +), CAediting_119579(168011853, +), CAediting_119580(168011858, +), CAediting_119581(168011879, +), CAediting_119582(168011882, +), CAediting_119583(168011894, +), CAediting_119584(168011898, +), CAediting_119585(168011901, +), CAediting_119586(168011905, +), CAediting_119587(168011923, +), CAediting_119588(168011925, +), CAediting_119589(168011928, +), CAediting_119590(168011943, +), CAediting_119591(168011973, +), CAediting_119592(168019666, +), CAediting_119593(168023960, +), CAediting_119594(168024008, +), CAediting_119595(168024106, +), CAediting_119596(168024119, +), CAediting_119597(168024123, +), CAediting_119598(168024135, +), CAediting_119599(168024528, +), CAediting_119600(168024544, +), CAediting_119601(168024577, +), CAediting_119602(168024581, +), CAediting_119603(168024620, +), CAediting_119604(168024657, +), CAediting_119605(168024683, +), CAediting_119606(168024697, +), CAediting_119607(168024743, +), CAediting_119608(168029827, +), CAediting_119609(168029837, +), CAediting_119610(168029892, +), CAediting_119611(168029905, +), CAediting_119612(168029909, +), CAediting_119613(168029921, +), CAediting_119614(168029937, +), CAediting_119615(168033328, +), CAediting_119616(168033528, +), CAediting_119617(168033591, +), CAediting_119618(168034241, +), CAediting_119619(168034243, +), CAediting_119620(168034253, +), CAediting_119621(168034259, +), CAediting_119622(168034260, +), CAediting_119623(168034266, +), CAediting_119624(168034286, +), CAediting_119625(168034305, +), CAediting_119626(168034314, +), CAediting_119627(168034328, +), CAediting_119628(168034333, +), CAediting_119629(168034384, +), CAediting_119630(168034390, +), CAediting_119631(168034391, +), CAediting_119632(168034400, +), CAediting_119633(168034417, +), CAediting_119634(168034431, +), CAediting_119635(168034436, +), CAediting_119636(168034496, +), CAediting_119637(168035168, +), CAediting_119638(168035184, +), CAediting_119639(168035205, +), CAediting_119640(168035212, +), CAediting_119641(168035213, +), CAediting_119642(168035217, +), CAediting_119643(168035244, +), CAediting_119644(168035260, +), CAediting_119645(168035267, +), CAediting_119646(168035300, +), CAediting_119647(168035304, +), CAediting_119648(168035311, +), CAediting_119649(168035316, +), CAediting_119650(168035324, +), CAediting_119651(168035326, +), CAediting_119652(168035332, +), CAediting_119653(168035336, +), CAediting_119654(168035340, +), CAediting_119655(168035343, +), CAediting_119656(168035392, +), CAediting_119657(168035418, +), CAediting_119658(168035424, +), CAediting_119659(168035861, +), CAediting_119660(168035919, +), CAediting_119661(168035920, +), CAediting_119662(168035941, +), CAediting_119663(168035942, +), CAediting_119664(168035947, +), CAediting_119665(168035951, +), CAediting_119666(168035968, +), CAediting_119667(168035974, +), CAediting_119668(168036012, +), CAediting_119669(168059758, +), CAediting_119670(168060232, +), CAediting_119671(168060234, +), CAediting_119672(168060266, +), CAediting_119673(168060395, +), CAediting_119674(168060768, +), CAediting_119675(168071493, +), CAediting_119676(168071514, +), CAediting_119677(168072043, +), CAediting_119678(168072176, +), CAediting_119679(168072242, +), CAediting_119680(168072254, +), CAediting_119681(168072262, +), CAediting_119682(168073029, +), CAediting_119683(168073187, +), CAediting_119684(168073900, +), CAediting_119685(168073907, +), CAediting_119686(168073931, +), CAediting_119687(168073936, +), CAediting_119688(168074000, +), CAediting_119689(168074010, +),

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RNA editing positional annotations for DCAF6 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_119524	chr1_167939552_+	ncRNA_intronic
CAediting_119525	chr1_167944049_+	ncRNA_intronic
CAediting_119526	chr1_167949385_+	ncRNA_intronic
CAediting_119527	chr1_167962900_+	ncRNA_intronic
CAediting_119528	chr1_167962901_+	ncRNA_intronic
CAediting_119529	chr1_167963123_+	ncRNA_intronic
CAediting_119530	chr1_167963494_+	ncRNA_intronic
CAediting_119531	chr1_167963510_+	ncRNA_intronic
CAediting_119532	chr1_167963515_+	ncRNA_intronic
CAediting_119533	chr1_167963534_+	ncRNA_intronic
CAediting_119534	chr1_167963612_+	ncRNA_intronic
CAediting_119535	chr1_167963664_+	ncRNA_intronic
CAediting_119536	chr1_167969800_+	ncRNA_intronic
CAediting_119537	chr1_167969902_+	ncRNA_intronic
CAediting_119538	chr1_167969904_+	ncRNA_intronic
CAediting_119539	chr1_167969906_+	ncRNA_intronic
CAediting_119540	chr1_167969911_+	ncRNA_intronic
CAediting_119541	chr1_167969916_+	ncRNA_intronic
CAediting_119542	chr1_167969919_+	ncRNA_intronic
CAediting_119543	chr1_167970387_+	ncRNA_intronic
CAediting_119544	chr1_167970393_+	ncRNA_intronic
CAediting_119545	chr1_167970450_+	ncRNA_intronic
CAediting_119546	chr1_167970456_+	ncRNA_intronic
CAediting_119547	chr1_167970464_+	ncRNA_intronic
CAediting_119548	chr1_167970470_+	ncRNA_intronic
CAediting_119549	chr1_167970527_+	ncRNA_intronic
CAediting_119550	chr1_167975607_+	ncRNA_intronic
CAediting_119551	chr1_167975675_+	ncRNA_intronic
CAediting_119552	chr1_167975691_+	ncRNA_intronic
CAediting_119553	chr1_167975822_+	ncRNA_intronic
CAediting_119554	chr1_167976219_+	ncRNA_intronic
CAediting_119555	chr1_167976349_+	ncRNA_intronic
CAediting_119556	chr1_167978710_+	ncRNA_intronic
CAediting_119557	chr1_167979701_+	ncRNA_intronic
CAediting_119558	chr1_167981127_+	ncRNA_intronic
CAediting_119559	chr1_167981145_+	ncRNA_intronic
CAediting_119560	chr1_167988191_+	ncRNA_intronic
CAediting_119561	chr1_167988364_+	ncRNA_intronic
CAediting_119562	chr1_167988826_+	ncRNA_intronic
CAediting_119563	chr1_167988919_+	ncRNA_intronic
CAediting_119564	chr1_167988933_+	ncRNA_intronic
CAediting_119565	chr1_167990307_+	ncRNA_intronic
CAediting_119566	chr1_168011216_+	intronic
CAediting_119567	chr1_168011233_+	intronic
CAediting_119568	chr1_168011298_+	intronic
CAediting_119569	chr1_168011377_+	intronic
CAediting_119570	chr1_168011378_+	intronic
CAediting_119571	chr1_168011700_+	intronic
CAediting_119572	chr1_168011723_+	intronic
CAediting_119573	chr1_168011728_+	intronic
CAediting_119574	chr1_168011739_+	intronic
CAediting_119575	chr1_168011792_+	intronic
CAediting_119576	chr1_168011794_+	intronic
CAediting_119577	chr1_168011800_+	intronic
CAediting_119578	chr1_168011852_+	intronic
CAediting_119579	chr1_168011853_+	intronic
CAediting_119580	chr1_168011858_+	intronic
CAediting_119581	chr1_168011879_+	intronic
CAediting_119582	chr1_168011882_+	intronic
CAediting_119583	chr1_168011894_+	intronic
CAediting_119584	chr1_168011898_+	intronic
CAediting_119585	chr1_168011901_+	intronic
CAediting_119586	chr1_168011905_+	intronic
CAediting_119587	chr1_168011923_+	intronic
CAediting_119588	chr1_168011925_+	intronic
CAediting_119589	chr1_168011928_+	intronic
CAediting_119590	chr1_168011943_+	intronic
CAediting_119591	chr1_168011973_+	intronic
CAediting_119592	chr1_168019666_+	ncRNA_exonic
CAediting_119593	chr1_168023960_+	UTR3
CAediting_119594	chr1_168024008_+	UTR3
CAediting_119595	chr1_168024106_+	intronic
CAediting_119596	chr1_168024119_+	intronic
CAediting_119597	chr1_168024123_+	intronic
CAediting_119598	chr1_168024135_+	intronic
CAediting_119599	chr1_168024528_+	intronic
CAediting_119600	chr1_168024544_+	intronic
CAediting_119601	chr1_168024577_+	intronic
CAediting_119602	chr1_168024581_+	intronic
CAediting_119603	chr1_168024620_+	intronic
CAediting_119604	chr1_168024657_+	intronic
CAediting_119605	chr1_168024683_+	intronic
CAediting_119606	chr1_168024697_+	intronic
CAediting_119607	chr1_168024743_+	intronic
CAediting_119608	chr1_168029827_+	intronic
CAediting_119609	chr1_168029837_+	intronic
CAediting_119610	chr1_168029892_+	intronic
CAediting_119611	chr1_168029905_+	intronic
CAediting_119612	chr1_168029909_+	intronic
CAediting_119613	chr1_168029921_+	intronic
CAediting_119614	chr1_168029937_+	intronic
CAediting_119615	chr1_168033328_+	intronic
CAediting_119616	chr1_168033528_+	intronic
CAediting_119617	chr1_168033591_+	intronic
CAediting_119618	chr1_168034241_+	intronic
CAediting_119619	chr1_168034243_+	intronic
CAediting_119620	chr1_168034253_+	intronic
CAediting_119621	chr1_168034259_+	intronic
CAediting_119622	chr1_168034260_+	intronic
CAediting_119623	chr1_168034266_+	intronic
CAediting_119624	chr1_168034286_+	intronic
CAediting_119625	chr1_168034305_+	intronic
CAediting_119626	chr1_168034314_+	intronic
CAediting_119627	chr1_168034328_+	intronic
CAediting_119628	chr1_168034333_+	intronic
CAediting_119629	chr1_168034384_+	intronic
CAediting_119630	chr1_168034390_+	intronic
CAediting_119631	chr1_168034391_+	intronic
CAediting_119632	chr1_168034400_+	intronic
CAediting_119633	chr1_168034417_+	intronic
CAediting_119634	chr1_168034431_+	intronic
CAediting_119635	chr1_168034436_+	intronic
CAediting_119636	chr1_168034496_+	intronic
CAediting_119637	chr1_168035168_+	intronic
CAediting_119638	chr1_168035184_+	intronic
CAediting_119639	chr1_168035205_+	intronic
CAediting_119640	chr1_168035212_+	intronic
CAediting_119641	chr1_168035213_+	intronic
CAediting_119642	chr1_168035217_+	intronic
CAediting_119643	chr1_168035244_+	intronic
CAediting_119644	chr1_168035260_+	intronic
CAediting_119645	chr1_168035267_+	intronic
CAediting_119646	chr1_168035300_+	intronic
CAediting_119647	chr1_168035304_+	intronic
CAediting_119648	chr1_168035311_+	intronic
CAediting_119649	chr1_168035316_+	intronic
CAediting_119650	chr1_168035324_+	intronic
CAediting_119651	chr1_168035326_+	intronic
CAediting_119652	chr1_168035332_+	intronic
CAediting_119653	chr1_168035336_+	intronic
CAediting_119654	chr1_168035340_+	intronic
CAediting_119655	chr1_168035343_+	intronic
CAediting_119656	chr1_168035392_+	intronic
CAediting_119657	chr1_168035418_+	intronic
CAediting_119658	chr1_168035424_+	intronic
CAediting_119659	chr1_168035861_+	intronic
CAediting_119660	chr1_168035919_+	intronic
CAediting_119661	chr1_168035920_+	intronic
CAediting_119662	chr1_168035941_+	intronic
CAediting_119663	chr1_168035942_+	intronic
CAediting_119664	chr1_168035947_+	intronic
CAediting_119665	chr1_168035951_+	intronic
CAediting_119666	chr1_168035968_+	intronic
CAediting_119667	chr1_168035974_+	intronic
CAediting_119668	chr1_168036012_+	intronic
CAediting_119669	chr1_168059758_+	ncRNA_intronic
CAediting_119670	chr1_168060232_+	ncRNA_intronic
CAediting_119671	chr1_168060234_+	ncRNA_intronic
CAediting_119672	chr1_168060266_+	ncRNA_intronic
CAediting_119673	chr1_168060395_+	ncRNA_intronic
CAediting_119674	chr1_168060768_+	ncRNA_intronic
CAediting_119675	chr1_168071493_+	ncRNA_intronic
CAediting_119676	chr1_168071514_+	ncRNA_intronic
CAediting_119677	chr1_168072043_+	ncRNA_intronic
CAediting_119678	chr1_168072176_+	ncRNA_intronic
CAediting_119679	chr1_168072242_+	ncRNA_intronic
CAediting_119680	chr1_168072254_+	ncRNA_intronic
CAediting_119681	chr1_168072262_+	ncRNA_intronic
CAediting_119682	chr1_168073029_+	ncRNA_intronic
CAediting_119683	chr1_168073187_+	ncRNA_intronic
CAediting_119684	chr1_168073900_+	ncRNA_intronic
CAediting_119685	chr1_168073907_+	ncRNA_intronic
CAediting_119686	chr1_168073931_+	ncRNA_intronic
CAediting_119687	chr1_168073936_+	ncRNA_intronic
CAediting_119688	chr1_168074000_+	ncRNA_intronic
CAediting_119689	chr1_168074010_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_119524	chr1_167939552_+	SINE	Alu	AluSz
CAediting_119525	chr1_167944049_+	SINE	Alu	AluY
CAediting_119526	chr1_167949385_+	LTR	ERVL	LTR40a
CAediting_119527	chr1_167962900_+	SINE	Alu	AluSx
CAediting_119528	chr1_167962901_+	SINE	Alu	AluSx
CAediting_119529	chr1_167963123_+	SINE	Alu	AluSq
CAediting_119530	chr1_167963494_+	SINE	Alu	AluSz
CAediting_119531	chr1_167963510_+	SINE	Alu	AluSz
CAediting_119532	chr1_167963515_+	SINE	Alu	AluSz
CAediting_119533	chr1_167963534_+	SINE	Alu	AluSz
CAediting_119534	chr1_167963612_+	SINE	Alu	AluSz
CAediting_119535	chr1_167963664_+	SINE	Alu	AluSz
CAediting_119536	chr1_167969800_+	SINE	Alu	AluSz
CAediting_119537	chr1_167969902_+	SINE	Alu	AluSz
CAediting_119538	chr1_167969904_+	SINE	Alu	AluSz
CAediting_119539	chr1_167969906_+	SINE	Alu	AluSz
CAediting_119540	chr1_167969911_+	SINE	Alu	AluSz
CAediting_119541	chr1_167969916_+	SINE	Alu	AluSz
CAediting_119542	chr1_167969919_+	SINE	Alu	AluSz
CAediting_119543	chr1_167970387_+	SINE	Alu	AluJr4
CAediting_119544	chr1_167970393_+	SINE	Alu	AluJr4
CAediting_119545	chr1_167970450_+	SINE	Alu	AluJr4
CAediting_119546	chr1_167970456_+	SINE	Alu	AluJr4
CAediting_119547	chr1_167970464_+	SINE	Alu	AluJr4
CAediting_119548	chr1_167970470_+	SINE	Alu	AluJr4
CAediting_119549	chr1_167970527_+	SINE	Alu	AluJr4
CAediting_119550	chr1_167975607_+	SINE	Alu	AluJo
CAediting_119551	chr1_167975675_+	SINE	Alu	AluJo
CAediting_119552	chr1_167975691_+	SINE	Alu	AluJo
CAediting_119553	chr1_167975822_+	SINE	Alu	AluJo
CAediting_119554	chr1_167976219_+	SINE	Alu	AluSz6
CAediting_119555	chr1_167976349_+	SINE	Alu	AluSz6
CAediting_119556	chr1_167978710_+	SINE	Alu	AluJo
CAediting_119557	chr1_167979701_+	SINE	Alu	AluSx1
CAediting_119558	chr1_167981127_+	SINE	Alu	AluSx
CAediting_119559	chr1_167981145_+	SINE	Alu	AluSx
CAediting_119560	chr1_167988191_+	SINE	Alu	AluJo
CAediting_119561	chr1_167988364_+	SINE	Alu	AluJo
CAediting_119562	chr1_167988826_+	SINE	Alu	AluSx3
CAediting_119563	chr1_167988919_+	SINE	Alu	AluSx3
CAediting_119564	chr1_167988933_+	SINE	Alu	AluSx3
CAediting_119565	chr1_167990307_+	SINE	Alu	AluJr4
CAediting_119566	chr1_168011216_+	SINE	Alu	AluSc
CAediting_119567	chr1_168011233_+	SINE	Alu	AluSc
CAediting_119568	chr1_168011298_+	SINE	Alu	AluSc
CAediting_119569	chr1_168011377_+	SINE	Alu	AluSc
CAediting_119570	chr1_168011378_+	SINE	Alu	AluSc
CAediting_119571	chr1_168011700_+	SINE	Alu	AluSx
CAediting_119572	chr1_168011723_+	SINE	Alu	AluSx
CAediting_119573	chr1_168011728_+	SINE	Alu	AluSx
CAediting_119574	chr1_168011739_+	SINE	Alu	AluSx
CAediting_119575	chr1_168011792_+	SINE	Alu	AluSx
CAediting_119576	chr1_168011794_+	SINE	Alu	AluSx
CAediting_119577	chr1_168011800_+	SINE	Alu	AluSx
CAediting_119578	chr1_168011852_+	SINE	Alu	AluSx
CAediting_119579	chr1_168011853_+	SINE	Alu	AluSx
CAediting_119580	chr1_168011858_+	SINE	Alu	AluSx
CAediting_119581	chr1_168011879_+	SINE	Alu	AluSx
CAediting_119582	chr1_168011882_+	SINE	Alu	AluSx
CAediting_119583	chr1_168011894_+	SINE	Alu	AluSx
CAediting_119584	chr1_168011898_+	SINE	Alu	AluSx
CAediting_119585	chr1_168011901_+	SINE	Alu	AluSx
CAediting_119586	chr1_168011905_+	SINE	Alu	AluSx
CAediting_119587	chr1_168011923_+	SINE	Alu	AluSx
CAediting_119588	chr1_168011925_+	SINE	Alu	AluSx
CAediting_119589	chr1_168011928_+	SINE	Alu	AluSx
CAediting_119590	chr1_168011943_+	SINE	Alu	AluSx
CAediting_119591	chr1_168011973_+	SINE	Alu	AluSx
CAediting_119593	chr1_168023960_+	SINE	Alu	AluJo
CAediting_119594	chr1_168024008_+	SINE	Alu	AluJo
CAediting_119595	chr1_168024106_+	SINE	Alu	AluJo
CAediting_119596	chr1_168024119_+	SINE	Alu	AluJo
CAediting_119597	chr1_168024123_+	SINE	Alu	AluJo
CAediting_119598	chr1_168024135_+	SINE	Alu	AluJo
CAediting_119599	chr1_168024528_+	SINE	Alu	AluSx
CAediting_119600	chr1_168024544_+	SINE	Alu	AluSx
CAediting_119601	chr1_168024577_+	SINE	Alu	AluSx
CAediting_119602	chr1_168024581_+	SINE	Alu	AluSx
CAediting_119603	chr1_168024620_+	SINE	Alu	AluSx
CAediting_119604	chr1_168024657_+	SINE	Alu	AluSx
CAediting_119605	chr1_168024683_+	SINE	Alu	AluSx
CAediting_119606	chr1_168024697_+	SINE	Alu	AluSx
CAediting_119607	chr1_168024743_+	SINE	Alu	AluSx
CAediting_119608	chr1_168029827_+	SINE	Alu	AluY
CAediting_119609	chr1_168029837_+	SINE	Alu	AluY
CAediting_119610	chr1_168029892_+	SINE	Alu	AluY
CAediting_119611	chr1_168029905_+	SINE	Alu	AluY
CAediting_119612	chr1_168029909_+	SINE	Alu	AluY
CAediting_119613	chr1_168029921_+	SINE	Alu	AluY
CAediting_119614	chr1_168029937_+	SINE	Alu	AluY
CAediting_119615	chr1_168033328_+	SINE	Alu	AluYb8
CAediting_119616	chr1_168033528_+	SINE	Alu	AluYb8
CAediting_119617	chr1_168033591_+	SINE	Alu	AluYb8
CAediting_119618	chr1_168034241_+	SINE	Alu	AluJr4
CAediting_119619	chr1_168034243_+	SINE	Alu	AluJr4
CAediting_119620	chr1_168034253_+	SINE	Alu	AluJr4
CAediting_119621	chr1_168034259_+	SINE	Alu	AluJr4
CAediting_119622	chr1_168034260_+	SINE	Alu	AluJr4
CAediting_119623	chr1_168034266_+	SINE	Alu	AluJr4
CAediting_119624	chr1_168034286_+	SINE	Alu	AluJr4
CAediting_119625	chr1_168034305_+	SINE	Alu	AluJr4
CAediting_119626	chr1_168034314_+	SINE	Alu	AluJr4
CAediting_119627	chr1_168034328_+	SINE	Alu	AluJr4
CAediting_119628	chr1_168034333_+	SINE	Alu	AluJr4
CAediting_119629	chr1_168034384_+	SINE	Alu	AluJr4
CAediting_119630	chr1_168034390_+	SINE	Alu	AluJr4
CAediting_119631	chr1_168034391_+	SINE	Alu	AluJr4
CAediting_119632	chr1_168034400_+	SINE	Alu	AluJr4
CAediting_119633	chr1_168034417_+	SINE	Alu	AluJr4
CAediting_119634	chr1_168034431_+	SINE	Alu	AluJr4
CAediting_119635	chr1_168034436_+	SINE	Alu	AluJr4
CAediting_119636	chr1_168034496_+	SINE	Alu	AluJr4
CAediting_119637	chr1_168035168_+	SINE	Alu	AluJb
CAediting_119638	chr1_168035184_+	SINE	Alu	AluJb
CAediting_119639	chr1_168035205_+	SINE	Alu	AluJb
CAediting_119640	chr1_168035212_+	SINE	Alu	AluJb
CAediting_119641	chr1_168035213_+	SINE	Alu	AluJb
CAediting_119642	chr1_168035217_+	SINE	Alu	AluJb
CAediting_119643	chr1_168035244_+	SINE	Alu	AluJb
CAediting_119644	chr1_168035260_+	SINE	Alu	AluJb
CAediting_119645	chr1_168035267_+	SINE	Alu	AluJb
CAediting_119646	chr1_168035300_+	SINE	Alu	AluJb
CAediting_119647	chr1_168035304_+	SINE	Alu	AluJb
CAediting_119648	chr1_168035311_+	SINE	Alu	AluJb
CAediting_119649	chr1_168035316_+	SINE	Alu	AluJb
CAediting_119650	chr1_168035324_+	SINE	Alu	AluJb
CAediting_119651	chr1_168035326_+	SINE	Alu	AluJb
CAediting_119652	chr1_168035332_+	SINE	Alu	AluJb
CAediting_119653	chr1_168035336_+	SINE	Alu	AluJb
CAediting_119654	chr1_168035340_+	SINE	Alu	AluJb
CAediting_119655	chr1_168035343_+	SINE	Alu	AluJb
CAediting_119656	chr1_168035392_+	SINE	Alu	AluJb
CAediting_119657	chr1_168035418_+	SINE	Alu	AluJb
CAediting_119658	chr1_168035424_+	SINE	Alu	AluJb
CAediting_119659	chr1_168035861_+	SINE	Alu	AluSx1
CAediting_119660	chr1_168035919_+	SINE	Alu	AluSx1
CAediting_119661	chr1_168035920_+	SINE	Alu	AluSx1
CAediting_119662	chr1_168035941_+	SINE	Alu	AluSx1
CAediting_119663	chr1_168035942_+	SINE	Alu	AluSx1
CAediting_119664	chr1_168035947_+	SINE	Alu	AluSx1
CAediting_119665	chr1_168035951_+	SINE	Alu	AluSx1
CAediting_119666	chr1_168035968_+	SINE	Alu	AluSx1
CAediting_119667	chr1_168035974_+	SINE	Alu	AluSx1
CAediting_119668	chr1_168036012_+	SINE	Alu	AluSx1
CAediting_119669	chr1_168059758_+	SINE	Alu	AluJo
CAediting_119670	chr1_168060232_+	SINE	Alu	AluJo
CAediting_119671	chr1_168060234_+	SINE	Alu	AluJo
CAediting_119672	chr1_168060266_+	SINE	Alu	AluJo
CAediting_119673	chr1_168060395_+	SINE	Alu	AluJo
CAediting_119674	chr1_168060768_+	SINE	Alu	AluSx1
CAediting_119675	chr1_168071493_+	SINE	Alu	AluSx
CAediting_119676	chr1_168071514_+	SINE	Alu	AluSx
CAediting_119677	chr1_168072043_+	SINE	Alu	AluSc
CAediting_119678	chr1_168072176_+	SINE	Alu	AluSc
CAediting_119679	chr1_168072242_+	SINE	Alu	AluSc
CAediting_119680	chr1_168072254_+	SINE	Alu	AluSc
CAediting_119681	chr1_168072262_+	SINE	Alu	AluSc
CAediting_119682	chr1_168073029_+	SINE	Alu	AluSc8
CAediting_119683	chr1_168073187_+	SINE	Alu	AluSc8

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RNA A-to-I editing events in the alternative splicing sites for DCAF6

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_119592	chr1_168019666_+	168019665:168019673	5SS	2+0i	CAGGTAGGA	9.79	CGGGTAGGA	7.22

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000143164.14.DCAF6.

Correlation between RNA A-to-I editing and PSI for ENSG00000143164.14.DCAF6.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for DCAF6

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for DCAF6

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for DCAF6

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_119592	chr1_168019666_+	ENSG00000143164.14	ENST00000470721	hsa-miR-551a	168019660	168019665	6mer	168019646	168019666	141.00	-23.69
CAediting_119594	chr1_168024008_+	ENSG00000143164.14	ENST00000470721	hsa-miR-216b-5p	168024004	168024010	7mer-m8	168023990	168024011	155.00	-16.93
CAediting_119594	chr1_168024008_+	ENSG00000143164.14	ENST00000470721	hsa-miR-3191-5p	168024002	168024008	7mer-m8	168023988	168024009	140.00	-15.53
CAediting_119594	chr1_168024008_+	ENSG00000143164.14	ENST00000470721	hsa-miR-326	168024001	168024008	8mer-1a	168023984	168024008	144.00	-23.75
CAediting_119594	chr1_168024008_+	ENSG00000143164.14	ENST00000470721	hsa-miR-330-5p	168024001	168024008	8mer-1a	168023984	168024008	148.00	-21.98
CAediting_119594	chr1_168024008_+	ENSG00000143164.14	ENST00000470721	hsa-miR-4762-5p	168024006	168024013	8mer-1a	168023990	168024013	142.00	-9.04

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_119592	chr1_168019666_+	ENSG00000143164.14	ENST00000470721	hsa-miR-4750-3p	168019660	168019666	7mer-m8	168019646	168019666	144	-14.89
CAediting_119593	chr1_168023960_+	ENSG00000143164.14	ENST00000470721	hsa-miR-10399-5p	168023954	168023960	7mer-m8	168023940	168023961	152	-11.07
CAediting_119594	chr1_168024008_+	ENSG00000143164.14	ENST00000470721	hsa-miR-3606-3p	168024005	168024011	7mer-m8	168023989	168024012	148	-6.1
CAediting_119593	chr1_168023960_+	ENSG00000143164.14	ENST00000470721	hsa-miR-5089-5p	168023958	168023964	7mer-m8	168023945	168023965	144	-12.56
CAediting_119594	chr1_168024008_+	ENSG00000143164.14	ENST00000470721	hsa-miR-513a-3p	168024005	168024011	7mer-m8	168023991	168024012	145	-10.21
CAediting_119594	chr1_168024008_+	ENSG00000143164.14	ENST00000470721	hsa-miR-513a-3p	168024005	168024011	7mer-m8	168023991	168024012	145	-10.21
CAediting_119594	chr1_168024008_+	ENSG00000143164.14	ENST00000470721	hsa-miR-513c-3p	168024005	168024011	7mer-m8	168023991	168024012	145	-9.04
CAediting_119593	chr1_168023960_+	ENSG00000143164.14	ENST00000470721	hsa-miR-6504-3p	168023954	168023960	7mer-m8	168023942	168023961	140	-12.05

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688081	chr9_63819627_+	ENSG00000143164.14	ENST00000432587	hsa-miR-4477b	168075692	168075698	7mer-m8	168075676	168075699	153	-11.9
CAediting_688081	chr9_63819627_+	ENSG00000143164.14	ENST00000367843	hsa-miR-4477b	168075692	168075698	7mer-m8	168075676	168075699	153	-11.9
CAediting_688081	chr9_63819627_+	ENSG00000143164.14	ENST00000312263	hsa-miR-4477b	168075692	168075698	7mer-m8	168075676	168075699	153	-11.9
CAediting_688081	chr9_63819627_+	ENSG00000143164.14	ENST00000367840	hsa-miR-4477b	168075692	168075698	7mer-m8	168075676	168075699	153	-11.9
CAediting_1160181	chr17_7017644_-	ENSG00000143164.14	ENST00000432587	hsa-miR-195-3p	168075569	168075575	7mer-m8	168075554	168075576	153	-16.88
CAediting_1160181	chr17_7017644_-	ENSG00000143164.14	ENST00000367843	hsa-miR-195-3p	168075569	168075575	7mer-m8	168075554	168075576	153	-16.88
CAediting_1229414	chr17_67471546_+	ENSG00000143164.14	ENST00000470721	hsa-miR-548aa	168023148	168023155	8mer-1a	168023131	168023155	158	-12.05
CAediting_442554	chr5_154685830_+	ENSG00000143164.14	ENST00000470721	hsa-miR-1303	168023613	168023619	7mer-m8	168023598	168023620	155	-19.37
CAediting_1160181	chr17_7017644_-	ENSG00000143164.14	ENST00000312263	hsa-miR-195-3p	168075569	168075575	7mer-m8	168075554	168075576	153	-16.88
CAediting_1160181	chr17_7017644_-	ENSG00000143164.14	ENST00000367840	hsa-miR-195-3p	168075569	168075575	7mer-m8	168075554	168075576	153	-16.88

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229414	chr17_67471546_+	ENSG00000143164.14	ENST00000470721	hsa-miR-548aa	168023463	168023470	8mer-1a	168023442	168023470	152	-13.58
CAediting_1229415	chr17_67471547_+	ENSG00000143164.14	ENST00000470721	hsa-miR-548aa	168023463	168023470	8mer-1a	168023442	168023470	152	-13.58

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for DCAF6

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000470721.4	nonsense_mediated_decay
ENST00000460432.1	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_119592	ENST00000470721.4	chr1_168019666_+	-830.40	-828.60	-834.90
CAediting_119593	ENST00000470721.4	chr1_168023960_+	-829.60	-828.60	-834.90
CAediting_119594	ENST00000470721.4	chr1_168024008_+	-831.70	-828.60	-834.90
CAediting_119592	ENST00000460432.1	chr1_168019666_+	-167.60	-161.40	-167.60

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Relation with ADAR for DCAF6

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for DCAF6

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for DCAF6

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for DCAF6

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for DCAF6

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
DCAF6	C0033578	Prostatic Neoplasms	1	CTD_human
DCAF6	C0376358	Malignant neoplasm of prostate	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene