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Editing gene: PECR (CAeditome ID:55825)

Gene summary for PECR

Gene summary

Gene information	Gene symbol	PECR
	Gene ID	55825
	Gene name	peroxisomal trans-2-enoyl-CoA reductase
	Synonyms	DCRRP\|HPDHASE\|HSA250303\|PVIARL\|SDR29C1\|TERP
	Cytomap	2q35
	Type of gene	protein-coding
	Description	peroxisomal trans-2-enoyl-CoA reductase2,4-dienoyl-CoA reductase-related proteinDCR-RPpVI-ARLputative short chain alcohol dehydrogenaseshort chain dehydrogenase/reductase family 29C member 1
	Modification date	20210518
	UniProtAcc	Q9BY49
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
PECR	GO:0008670	Peroxisomal trans-2-enoyl-CoA reductase	11669066
PECR	GO:0019166	Peroxisomal trans-2-enoyl-CoA reductase	16546181
PECR	GO:0033306	Peroxisomal trans-2-enoyl-CoA reductase	16546181
PECR	GO:0005777	Peroxisomal trans-2-enoyl-CoA reductase	0000052
PECR	GO:0005777	Peroxisomal trans-2-enoyl-CoA reductase	11669066

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RNA A-to-I events for PECR

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000115425.12

RNA A-to-I editing events in Cancer.

CAediting_242312(216004530, -), CAediting_242313(216004531, -), CAediting_242314(216005520, -), CAediting_242315(216005537, -), CAediting_242316(216005548, -), CAediting_242317(216005549, -), CAediting_242318(216005554, -), CAediting_242319(216005557, -), CAediting_242320(216008264, -), CAediting_242321(216008300, -), CAediting_242322(216008304, -), CAediting_242323(216008308, -), CAediting_242324(216023847, -), CAediting_242325(216023850, -), CAediting_242326(216029207, -), CAediting_242327(216029235, -), CAediting_242328(216029295, -), CAediting_242329(216029298, -), CAediting_242330(216029315, -), CAediting_242331(216029321, -), CAediting_242332(216029334, -), CAediting_242333(216029351, -), CAediting_242334(216029352, -), CAediting_242335(216029354, -), CAediting_242336(216029356, -), CAediting_242337(216029378, -), CAediting_242338(216029391, -), CAediting_242339(216029392, -), CAediting_242340(216029395, -), CAediting_242341(216029402, -), CAediting_242342(216029415, -), CAediting_242343(216029421, -), CAediting_242344(216029426, -), CAediting_242345(216029431, -), CAediting_242346(216029440, -), CAediting_242347(216029474, -), CAediting_242348(216030293, -), CAediting_242349(216030598, -), CAediting_242350(216030620, -), CAediting_242351(216030640, -), CAediting_242352(216030651, -), CAediting_242353(216030658, -), CAediting_242354(216030667, -), CAediting_242355(216030675, -), CAediting_242356(216030680, -), CAediting_242357(216030681, -), CAediting_242358(216030683, -), CAediting_242359(216030703, -), CAediting_242360(216030707, -), CAediting_242361(216030710, -), CAediting_242362(216030711, -), CAediting_242363(216030712, -), CAediting_242364(216030713, -), CAediting_242365(216030716, -), CAediting_242366(216030718, -), CAediting_242367(216030745, -), CAediting_242368(216030766, -), CAediting_242369(216030767, -), CAediting_242370(216030779, -), CAediting_242371(216030781, -), CAediting_242372(216030789, -), CAediting_242373(216030800, -), CAediting_242374(216030814, -), CAediting_242375(216030819, -), CAediting_242376(216030820, -), CAediting_242377(216031150, -), CAediting_242378(216031295, -), CAediting_242379(216031298, -), CAediting_242380(216031299, -), CAediting_242381(216031307, -), CAediting_242382(216031320, -), CAediting_242383(216031321, -), CAediting_242384(216031324, -), CAediting_242385(216031325, -), CAediting_242386(216031355, -), CAediting_242387(216031360, -), CAediting_242388(216031393, -), CAediting_242389(216035584, -), CAediting_242390(216035592, -), CAediting_242391(216035603, -), CAediting_242392(216035607, -), CAediting_242393(216035615, -), CAediting_242394(216035650, -), CAediting_242395(216037828, -), CAediting_242396(216037841, -), CAediting_242397(216037902, -), CAediting_242398(216037973, -), CAediting_242399(216037998, -), CAediting_242400(216038002, -), CAediting_242401(216038025, -), CAediting_242402(216038644, -), CAediting_242403(216038646, -), CAediting_242404(216038648, -), CAediting_242405(216038658, -), CAediting_242406(216038663, -), CAediting_242407(216038673, -), CAediting_242408(216038678, -), CAediting_242409(216038687, -), CAediting_242410(216038694, -), CAediting_242411(216038696, -), CAediting_242412(216038699, -), CAediting_242413(216038700, -), CAediting_242414(216038703, -), CAediting_242415(216038707, -), CAediting_242416(216038708, -), CAediting_242417(216038719, -), CAediting_242418(216038722, -), CAediting_242419(216038726, -), CAediting_242420(216038739, -), CAediting_242421(216038743, -), CAediting_242422(216038749, -), CAediting_242423(216038755, -), CAediting_242424(216038757, -), CAediting_242425(216038759, -), CAediting_242426(216038775, -), CAediting_242427(216038779, -), CAediting_242428(216038807, -), CAediting_242429(216038818, -), CAediting_242430(216038820, -), CAediting_242431(216038821, -), CAediting_242432(216038826, -), CAediting_242433(216038828, -), CAediting_242434(216038829, -), CAediting_242435(216038841, -), CAediting_242436(216038843, -), CAediting_242437(216038844, -), CAediting_242438(216038849, -), CAediting_242439(216038852, -), CAediting_242440(216038857, -), CAediting_242441(216038862, -), CAediting_242442(216038871, -), CAediting_242443(216038875, -), CAediting_242444(216038881, -), CAediting_242445(216038889, -), CAediting_242446(216038892, -), CAediting_242447(216038897, -), CAediting_242448(216038898, -), CAediting_242449(216038906, -), CAediting_242450(216038914, -), CAediting_242451(216038920, -), CAediting_242452(216038932, -), CAediting_242453(216040360, -), CAediting_242454(216040473, -), CAediting_242455(216040533, -), CAediting_242456(216040866, -), CAediting_242457(216040868, -), CAediting_242458(216048348, -), CAediting_242459(216048598, -), CAediting_242460(216054421, -), CAediting_242461(216054438, -), CAediting_242462(216054473, -), CAediting_242463(216054496, -), CAediting_242464(216054500, -), CAediting_242465(216054563, -), CAediting_242466(216060405, -), CAediting_242467(216060417, -), CAediting_242468(216060444, -), CAediting_242469(216060663, -), CAediting_242470(216060665, -), CAediting_242471(216062142, -), CAediting_242472(216062143, -), CAediting_242473(216062167, -), CAediting_242474(216062186, -), CAediting_242475(216062210, -), CAediting_242476(216062224, -), CAediting_242477(216062263, -), CAediting_242478(216062302, -), CAediting_242479(216063535, -), CAediting_242480(216063536, -), CAediting_242481(216067695, -),

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RNA editing positional annotations for PECR using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_242312	chr2_216004530_-	intronic
CAediting_242313	chr2_216004531_-	intronic
CAediting_242314	chr2_216005520_-	intronic
CAediting_242315	chr2_216005537_-	intronic
CAediting_242316	chr2_216005548_-	intronic
CAediting_242317	chr2_216005549_-	intronic
CAediting_242318	chr2_216005554_-	intronic
CAediting_242319	chr2_216005557_-	intronic
CAediting_242320	chr2_216008264_-	intronic
CAediting_242321	chr2_216008300_-	intronic
CAediting_242322	chr2_216008304_-	intronic
CAediting_242323	chr2_216008308_-	intronic
CAediting_242324	chr2_216023847_-	intronic
CAediting_242325	chr2_216023850_-	intronic
CAediting_242326	chr2_216029207_-	intronic
CAediting_242327	chr2_216029235_-	intronic
CAediting_242328	chr2_216029295_-	intronic
CAediting_242329	chr2_216029298_-	intronic
CAediting_242330	chr2_216029315_-	intronic
CAediting_242331	chr2_216029321_-	intronic
CAediting_242332	chr2_216029334_-	intronic
CAediting_242333	chr2_216029351_-	intronic
CAediting_242334	chr2_216029352_-	intronic
CAediting_242335	chr2_216029354_-	intronic
CAediting_242336	chr2_216029356_-	intronic
CAediting_242337	chr2_216029378_-	intronic
CAediting_242338	chr2_216029391_-	intronic
CAediting_242339	chr2_216029392_-	intronic
CAediting_242340	chr2_216029395_-	intronic
CAediting_242341	chr2_216029402_-	intronic
CAediting_242342	chr2_216029415_-	intronic
CAediting_242343	chr2_216029421_-	intronic
CAediting_242344	chr2_216029426_-	intronic
CAediting_242345	chr2_216029431_-	intronic
CAediting_242346	chr2_216029440_-	intronic
CAediting_242347	chr2_216029474_-	intronic
CAediting_242348	chr2_216030293_-	intronic
CAediting_242349	chr2_216030598_-	intronic
CAediting_242350	chr2_216030620_-	intronic
CAediting_242351	chr2_216030640_-	intronic
CAediting_242352	chr2_216030651_-	intronic
CAediting_242353	chr2_216030658_-	intronic
CAediting_242354	chr2_216030667_-	intronic
CAediting_242355	chr2_216030675_-	intronic
CAediting_242356	chr2_216030680_-	intronic
CAediting_242357	chr2_216030681_-	intronic
CAediting_242358	chr2_216030683_-	intronic
CAediting_242359	chr2_216030703_-	intronic
CAediting_242360	chr2_216030707_-	intronic
CAediting_242361	chr2_216030710_-	intronic
CAediting_242362	chr2_216030711_-	intronic
CAediting_242363	chr2_216030712_-	intronic
CAediting_242364	chr2_216030713_-	intronic
CAediting_242365	chr2_216030716_-	intronic
CAediting_242366	chr2_216030718_-	intronic
CAediting_242367	chr2_216030745_-	intronic
CAediting_242368	chr2_216030766_-	intronic
CAediting_242369	chr2_216030767_-	intronic
CAediting_242370	chr2_216030779_-	intronic
CAediting_242371	chr2_216030781_-	intronic
CAediting_242372	chr2_216030789_-	intronic
CAediting_242373	chr2_216030800_-	intronic
CAediting_242374	chr2_216030814_-	intronic
CAediting_242375	chr2_216030819_-	intronic
CAediting_242376	chr2_216030820_-	intronic
CAediting_242377	chr2_216031150_-	intronic
CAediting_242378	chr2_216031295_-	intronic
CAediting_242379	chr2_216031298_-	intronic
CAediting_242380	chr2_216031299_-	intronic
CAediting_242381	chr2_216031307_-	intronic
CAediting_242382	chr2_216031320_-	intronic
CAediting_242383	chr2_216031321_-	intronic
CAediting_242384	chr2_216031324_-	intronic
CAediting_242385	chr2_216031325_-	intronic
CAediting_242386	chr2_216031355_-	intronic
CAediting_242387	chr2_216031360_-	intronic
CAediting_242388	chr2_216031393_-	intronic
CAediting_242389	chr2_216035584_-	intronic
CAediting_242390	chr2_216035592_-	intronic
CAediting_242391	chr2_216035603_-	intronic
CAediting_242392	chr2_216035607_-	intronic
CAediting_242393	chr2_216035615_-	intronic
CAediting_242394	chr2_216035650_-	intronic
CAediting_242395	chr2_216037828_-	intronic
CAediting_242396	chr2_216037841_-	intronic
CAediting_242397	chr2_216037902_-	intronic
CAediting_242398	chr2_216037973_-	intronic
CAediting_242399	chr2_216037998_-	intronic
CAediting_242400	chr2_216038002_-	intronic
CAediting_242401	chr2_216038025_-	intronic
CAediting_242402	chr2_216038644_-	UTR3
CAediting_242403	chr2_216038646_-	UTR3
CAediting_242404	chr2_216038648_-	UTR3
CAediting_242405	chr2_216038658_-	UTR3
CAediting_242406	chr2_216038663_-	UTR3
CAediting_242407	chr2_216038673_-	UTR3
CAediting_242408	chr2_216038678_-	UTR3
CAediting_242409	chr2_216038687_-	UTR3
CAediting_242410	chr2_216038694_-	UTR3
CAediting_242411	chr2_216038696_-	UTR3
CAediting_242412	chr2_216038699_-	UTR3
CAediting_242413	chr2_216038700_-	UTR3
CAediting_242414	chr2_216038703_-	UTR3
CAediting_242415	chr2_216038707_-	UTR3
CAediting_242416	chr2_216038708_-	UTR3
CAediting_242417	chr2_216038719_-	UTR3
CAediting_242418	chr2_216038722_-	UTR3
CAediting_242419	chr2_216038726_-	UTR3
CAediting_242420	chr2_216038739_-	UTR3
CAediting_242421	chr2_216038743_-	UTR3
CAediting_242422	chr2_216038749_-	UTR3
CAediting_242423	chr2_216038755_-	UTR3
CAediting_242424	chr2_216038757_-	UTR3
CAediting_242425	chr2_216038759_-	UTR3
CAediting_242426	chr2_216038775_-	UTR3
CAediting_242427	chr2_216038779_-	UTR3
CAediting_242428	chr2_216038807_-	UTR3
CAediting_242429	chr2_216038818_-	UTR3
CAediting_242430	chr2_216038820_-	UTR3
CAediting_242431	chr2_216038821_-	UTR3
CAediting_242432	chr2_216038826_-	UTR3
CAediting_242433	chr2_216038828_-	UTR3
CAediting_242434	chr2_216038829_-	UTR3
CAediting_242435	chr2_216038841_-	UTR3
CAediting_242436	chr2_216038843_-	UTR3
CAediting_242437	chr2_216038844_-	UTR3
CAediting_242438	chr2_216038849_-	UTR3
CAediting_242439	chr2_216038852_-	UTR3
CAediting_242440	chr2_216038857_-	UTR3
CAediting_242441	chr2_216038862_-	UTR3
CAediting_242442	chr2_216038871_-	UTR3
CAediting_242443	chr2_216038875_-	UTR3
CAediting_242444	chr2_216038881_-	UTR3
CAediting_242445	chr2_216038889_-	UTR3
CAediting_242446	chr2_216038892_-	UTR3
CAediting_242447	chr2_216038897_-	UTR3
CAediting_242448	chr2_216038898_-	UTR3
CAediting_242449	chr2_216038906_-	UTR3
CAediting_242450	chr2_216038914_-	UTR3
CAediting_242451	chr2_216038920_-	UTR3
CAediting_242452	chr2_216038932_-	UTR3
CAediting_242453	chr2_216040360_-	ncRNA_intronic
CAediting_242454	chr2_216040473_-	ncRNA_intronic
CAediting_242455	chr2_216040533_-	ncRNA_intronic
CAediting_242456	chr2_216040866_-	ncRNA_intronic
CAediting_242457	chr2_216040868_-	ncRNA_intronic
CAediting_242458	chr2_216048348_-	ncRNA_intronic
CAediting_242459	chr2_216048598_-	ncRNA_intronic
CAediting_242460	chr2_216054421_-	ncRNA_intronic
CAediting_242461	chr2_216054438_-	ncRNA_intronic
CAediting_242462	chr2_216054473_-	ncRNA_intronic
CAediting_242463	chr2_216054496_-	ncRNA_intronic
CAediting_242464	chr2_216054500_-	ncRNA_intronic
CAediting_242465	chr2_216054563_-	ncRNA_intronic
CAediting_242466	chr2_216060405_-	ncRNA_intronic
CAediting_242467	chr2_216060417_-	ncRNA_intronic
CAediting_242468	chr2_216060444_-	ncRNA_intronic
CAediting_242469	chr2_216060663_-	ncRNA_intronic
CAediting_242470	chr2_216060665_-	ncRNA_intronic
CAediting_242471	chr2_216062142_-	ncRNA_intronic
CAediting_242472	chr2_216062143_-	ncRNA_intronic
CAediting_242473	chr2_216062167_-	ncRNA_intronic
CAediting_242474	chr2_216062186_-	ncRNA_intronic
CAediting_242475	chr2_216062210_-	ncRNA_intronic
CAediting_242476	chr2_216062224_-	ncRNA_intronic
CAediting_242477	chr2_216062263_-	ncRNA_intronic
CAediting_242478	chr2_216062302_-	ncRNA_intronic
CAediting_242479	chr2_216063535_-	ncRNA_intronic
CAediting_242480	chr2_216063536_-	ncRNA_intronic
CAediting_242481	chr2_216067695_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_242312	chr2_216004530_-	SINE	Alu	AluSx3
CAediting_242313	chr2_216004531_-	SINE	Alu	AluSx3
CAediting_242314	chr2_216005520_-	SINE	Alu	AluSz
CAediting_242315	chr2_216005537_-	SINE	Alu	AluSz
CAediting_242316	chr2_216005548_-	SINE	Alu	AluSz
CAediting_242317	chr2_216005549_-	SINE	Alu	AluSz
CAediting_242318	chr2_216005554_-	SINE	Alu	AluSz
CAediting_242319	chr2_216005557_-	SINE	Alu	AluSz
CAediting_242324	chr2_216023847_-	SINE	Alu	AluSx1
CAediting_242325	chr2_216023850_-	SINE	Alu	AluSx1
CAediting_242326	chr2_216029207_-	SINE	Alu	AluSc
CAediting_242327	chr2_216029235_-	SINE	Alu	AluSc
CAediting_242328	chr2_216029295_-	SINE	Alu	AluSc
CAediting_242329	chr2_216029298_-	SINE	Alu	AluSc
CAediting_242330	chr2_216029315_-	SINE	Alu	AluSc
CAediting_242331	chr2_216029321_-	SINE	Alu	AluSc
CAediting_242332	chr2_216029334_-	SINE	Alu	AluSc
CAediting_242333	chr2_216029351_-	SINE	Alu	AluSc
CAediting_242334	chr2_216029352_-	SINE	Alu	AluSc
CAediting_242335	chr2_216029354_-	SINE	Alu	AluSc
CAediting_242336	chr2_216029356_-	SINE	Alu	AluSc
CAediting_242337	chr2_216029378_-	SINE	Alu	AluSc
CAediting_242338	chr2_216029391_-	SINE	Alu	AluSc
CAediting_242339	chr2_216029392_-	SINE	Alu	AluSc
CAediting_242340	chr2_216029395_-	SINE	Alu	AluSc
CAediting_242341	chr2_216029402_-	SINE	Alu	AluSc
CAediting_242342	chr2_216029415_-	SINE	Alu	AluSc
CAediting_242343	chr2_216029421_-	SINE	Alu	AluSc
CAediting_242344	chr2_216029426_-	SINE	Alu	AluSc
CAediting_242345	chr2_216029431_-	SINE	Alu	AluSc
CAediting_242346	chr2_216029440_-	SINE	Alu	AluSc
CAediting_242347	chr2_216029474_-	SINE	Alu	AluSc
CAediting_242349	chr2_216030598_-	SINE	Alu	AluSx
CAediting_242350	chr2_216030620_-	SINE	Alu	AluSx
CAediting_242351	chr2_216030640_-	SINE	Alu	AluSx
CAediting_242352	chr2_216030651_-	SINE	Alu	AluSx
CAediting_242353	chr2_216030658_-	SINE	Alu	AluSx
CAediting_242354	chr2_216030667_-	SINE	Alu	AluSx
CAediting_242355	chr2_216030675_-	SINE	Alu	AluSx
CAediting_242356	chr2_216030680_-	SINE	Alu	AluSx
CAediting_242357	chr2_216030681_-	SINE	Alu	AluSx
CAediting_242358	chr2_216030683_-	SINE	Alu	AluSx
CAediting_242359	chr2_216030703_-	SINE	Alu	AluSx
CAediting_242360	chr2_216030707_-	SINE	Alu	AluSx
CAediting_242361	chr2_216030710_-	SINE	Alu	AluSx
CAediting_242362	chr2_216030711_-	SINE	Alu	AluSx
CAediting_242363	chr2_216030712_-	SINE	Alu	AluSx
CAediting_242364	chr2_216030713_-	SINE	Alu	AluSx
CAediting_242365	chr2_216030716_-	SINE	Alu	AluSx
CAediting_242366	chr2_216030718_-	SINE	Alu	AluSx
CAediting_242367	chr2_216030745_-	SINE	Alu	AluSx
CAediting_242368	chr2_216030766_-	SINE	Alu	AluSx
CAediting_242369	chr2_216030767_-	SINE	Alu	AluSx
CAediting_242370	chr2_216030779_-	SINE	Alu	AluSx
CAediting_242371	chr2_216030781_-	SINE	Alu	AluSx
CAediting_242372	chr2_216030789_-	SINE	Alu	AluSx
CAediting_242373	chr2_216030800_-	SINE	Alu	AluSx
CAediting_242374	chr2_216030814_-	SINE	Alu	AluSx
CAediting_242375	chr2_216030819_-	SINE	Alu	AluSx
CAediting_242376	chr2_216030820_-	SINE	Alu	AluSx
CAediting_242377	chr2_216031150_-	SINE	Alu	AluSx1
CAediting_242378	chr2_216031295_-	SINE	Alu	AluSx1
CAediting_242379	chr2_216031298_-	SINE	Alu	AluSx1
CAediting_242380	chr2_216031299_-	SINE	Alu	AluSx1
CAediting_242381	chr2_216031307_-	SINE	Alu	AluSx1
CAediting_242382	chr2_216031320_-	SINE	Alu	AluSx1
CAediting_242383	chr2_216031321_-	SINE	Alu	AluSx1
CAediting_242384	chr2_216031324_-	SINE	Alu	AluSx1
CAediting_242385	chr2_216031325_-	SINE	Alu	AluSx1
CAediting_242386	chr2_216031355_-	SINE	Alu	AluSx1
CAediting_242387	chr2_216031360_-	SINE	Alu	AluSx1
CAediting_242388	chr2_216031393_-	SINE	Alu	AluSx1
CAediting_242389	chr2_216035584_-	SINE	Alu	AluSx1
CAediting_242390	chr2_216035592_-	SINE	Alu	AluSx1
CAediting_242391	chr2_216035603_-	SINE	Alu	AluSx1
CAediting_242392	chr2_216035607_-	SINE	Alu	AluSx1
CAediting_242393	chr2_216035615_-	SINE	Alu	AluSx1
CAediting_242394	chr2_216035650_-	SINE	Alu	AluSx1
CAediting_242395	chr2_216037828_-	SINE	Alu	AluSz
CAediting_242396	chr2_216037841_-	SINE	Alu	AluSz
CAediting_242397	chr2_216037902_-	SINE	Alu	AluSz
CAediting_242398	chr2_216037973_-	SINE	Alu	AluSz
CAediting_242399	chr2_216037998_-	SINE	Alu	AluSz
CAediting_242400	chr2_216038002_-	SINE	Alu	AluSz
CAediting_242401	chr2_216038025_-	SINE	Alu	AluSz
CAediting_242402	chr2_216038644_-	SINE	Alu	AluSz
CAediting_242403	chr2_216038646_-	SINE	Alu	AluSz
CAediting_242404	chr2_216038648_-	SINE	Alu	AluSz
CAediting_242405	chr2_216038658_-	SINE	Alu	AluSz
CAediting_242406	chr2_216038663_-	SINE	Alu	AluSz
CAediting_242407	chr2_216038673_-	SINE	Alu	AluSz
CAediting_242408	chr2_216038678_-	SINE	Alu	AluSz
CAediting_242409	chr2_216038687_-	SINE	Alu	AluSz
CAediting_242410	chr2_216038694_-	SINE	Alu	AluSz
CAediting_242411	chr2_216038696_-	SINE	Alu	AluSz
CAediting_242412	chr2_216038699_-	SINE	Alu	AluSz
CAediting_242413	chr2_216038700_-	SINE	Alu	AluSz
CAediting_242414	chr2_216038703_-	SINE	Alu	AluSz
CAediting_242415	chr2_216038707_-	SINE	Alu	AluSz
CAediting_242416	chr2_216038708_-	SINE	Alu	AluSz
CAediting_242417	chr2_216038719_-	SINE	Alu	AluSz
CAediting_242418	chr2_216038722_-	SINE	Alu	AluSz
CAediting_242419	chr2_216038726_-	SINE	Alu	AluSz
CAediting_242420	chr2_216038739_-	SINE	Alu	AluSz
CAediting_242421	chr2_216038743_-	SINE	Alu	AluSz
CAediting_242422	chr2_216038749_-	SINE	Alu	AluSz
CAediting_242423	chr2_216038755_-	SINE	Alu	AluSz
CAediting_242424	chr2_216038757_-	SINE	Alu	AluSz
CAediting_242425	chr2_216038759_-	SINE	Alu	AluSz
CAediting_242426	chr2_216038775_-	SINE	Alu	AluSz
CAediting_242427	chr2_216038779_-	SINE	Alu	AluSz
CAediting_242428	chr2_216038807_-	SINE	Alu	AluSz
CAediting_242429	chr2_216038818_-	SINE	Alu	AluSz
CAediting_242430	chr2_216038820_-	SINE	Alu	AluSz
CAediting_242431	chr2_216038821_-	SINE	Alu	AluSz
CAediting_242432	chr2_216038826_-	SINE	Alu	AluSz
CAediting_242433	chr2_216038828_-	SINE	Alu	AluSz
CAediting_242434	chr2_216038829_-	SINE	Alu	AluSz
CAediting_242435	chr2_216038841_-	SINE	Alu	AluSz
CAediting_242436	chr2_216038843_-	SINE	Alu	AluSz
CAediting_242437	chr2_216038844_-	SINE	Alu	AluSz
CAediting_242438	chr2_216038849_-	SINE	Alu	AluSz
CAediting_242439	chr2_216038852_-	SINE	Alu	AluSz
CAediting_242440	chr2_216038857_-	SINE	Alu	AluSz
CAediting_242441	chr2_216038862_-	SINE	Alu	AluSz
CAediting_242442	chr2_216038871_-	SINE	Alu	AluSz
CAediting_242443	chr2_216038875_-	SINE	Alu	AluSz
CAediting_242444	chr2_216038881_-	SINE	Alu	AluSz
CAediting_242445	chr2_216038889_-	SINE	Alu	AluSz
CAediting_242446	chr2_216038892_-	SINE	Alu	AluSz
CAediting_242447	chr2_216038897_-	SINE	Alu	AluSz
CAediting_242448	chr2_216038898_-	SINE	Alu	AluSz
CAediting_242449	chr2_216038906_-	SINE	Alu	AluSz
CAediting_242450	chr2_216038914_-	SINE	Alu	AluSz
CAediting_242451	chr2_216038920_-	SINE	Alu	AluSz
CAediting_242453	chr2_216040360_-	SINE	Alu	AluJb
CAediting_242454	chr2_216040473_-	SINE	Alu	AluJb
CAediting_242455	chr2_216040533_-	SINE	Alu	AluJb
CAediting_242456	chr2_216040866_-	SINE	Alu	AluSq
CAediting_242457	chr2_216040868_-	SINE	Alu	AluSq
CAediting_242458	chr2_216048348_-	SINE	Alu	AluY
CAediting_242459	chr2_216048598_-	SINE	Alu	AluSz
CAediting_242460	chr2_216054421_-	SINE	Alu	AluSx
CAediting_242461	chr2_216054438_-	SINE	Alu	AluSx
CAediting_242462	chr2_216054473_-	SINE	Alu	AluSx
CAediting_242463	chr2_216054496_-	SINE	Alu	AluSx
CAediting_242464	chr2_216054500_-	SINE	Alu	AluSx
CAediting_242465	chr2_216054563_-	SINE	Alu	AluSx
CAediting_242466	chr2_216060405_-	SINE	Alu	AluJr
CAediting_242467	chr2_216060417_-	SINE	Alu	AluJr
CAediting_242468	chr2_216060444_-	SINE	Alu	AluJr
CAediting_242469	chr2_216060663_-	SINE	Alu	AluJr
CAediting_242470	chr2_216060665_-	SINE	Alu	AluJr
CAediting_242471	chr2_216062142_-	SINE	Alu	AluSz
CAediting_242472	chr2_216062143_-	SINE	Alu	AluSz
CAediting_242473	chr2_216062167_-	SINE	Alu	AluSz
CAediting_242474	chr2_216062186_-	SINE	Alu	AluSz
CAediting_242475	chr2_216062210_-	SINE	Alu	AluSz
CAediting_242476	chr2_216062224_-	SINE	Alu	AluSz
CAediting_242477	chr2_216062263_-	SINE	Alu	AluSz
CAediting_242478	chr2_216062302_-	SINE	Alu	AluSz
CAediting_242479	chr2_216063535_-	SINE	Alu	AluSc
CAediting_242480	chr2_216063536_-	SINE	Alu	AluSc
CAediting_242481	chr2_216067695_-	SINE	Alu	AluSc

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RNA A-to-I editing events in the alternative splicing sites for PECR

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000115425.12.PECR.

Correlation between RNA A-to-I editing and PSI for ENSG00000115425.12.PECR.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PECR

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

KIRC.CAediting_242422.ENSG00000115425.PECR.png
Soverview

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Protein coding region RNA A-to-I editings for PECR

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for PECR

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000115425.12	ENST00000442122	hsa-miR-624-3p	215996349	215996356	8mer-1a	215996349	215996369	149	-14.77

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PECR

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000265322.7	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_242402	ENST00000265322.7	chr2_216038644_-	-575.60	-573.10	-618.70
CAediting_242403	ENST00000265322.7	chr2_216038646_-	-573.10	-573.10	-618.70
CAediting_242404	ENST00000265322.7	chr2_216038648_-	-573.10	-573.10	-618.70
CAediting_242405	ENST00000265322.7	chr2_216038658_-	-574.10	-573.10	-618.70
CAediting_242406	ENST00000265322.7	chr2_216038663_-	-572.30	-573.10	-618.70
CAediting_242407	ENST00000265322.7	chr2_216038673_-	-572.50	-573.10	-618.70
CAediting_242408	ENST00000265322.7	chr2_216038678_-	-573.10	-573.10	-618.70
CAediting_242409	ENST00000265322.7	chr2_216038687_-	-572.40	-573.10	-618.70
CAediting_242410	ENST00000265322.7	chr2_216038694_-	-576.10	-573.10	-618.70
CAediting_242411	ENST00000265322.7	chr2_216038696_-	-575.20	-573.10	-618.70
CAediting_242412	ENST00000265322.7	chr2_216038699_-	-573.10	-573.10	-618.70
CAediting_242413	ENST00000265322.7	chr2_216038700_-	-573.30	-573.10	-618.70
CAediting_242414	ENST00000265322.7	chr2_216038703_-	-572.40	-573.10	-618.70
CAediting_242415	ENST00000265322.7	chr2_216038707_-	-578.30	-573.10	-618.70
CAediting_242416	ENST00000265322.7	chr2_216038708_-	-573.80	-573.10	-618.70
CAediting_242417	ENST00000265322.7	chr2_216038719_-	-573.10	-573.10	-618.70
CAediting_242418	ENST00000265322.7	chr2_216038722_-	-574.60	-573.10	-618.70
CAediting_242419	ENST00000265322.7	chr2_216038726_-	-574.80	-573.10	-618.70
CAediting_242420	ENST00000265322.7	chr2_216038739_-	-573.10	-573.10	-618.70
CAediting_242421	ENST00000265322.7	chr2_216038743_-	-572.30	-573.10	-618.70
CAediting_242422	ENST00000265322.7	chr2_216038749_-	-573.10	-573.10	-618.70
CAediting_242423	ENST00000265322.7	chr2_216038755_-	-573.20	-573.10	-618.70
CAediting_242424	ENST00000265322.7	chr2_216038757_-	-572.70	-573.10	-618.70
CAediting_242425	ENST00000265322.7	chr2_216038759_-	-572.80	-573.10	-618.70
CAediting_242426	ENST00000265322.7	chr2_216038775_-	-573.20	-573.10	-618.70
CAediting_242427	ENST00000265322.7	chr2_216038779_-	-572.80	-573.10	-618.70
CAediting_242428	ENST00000265322.7	chr2_216038807_-	-573.50	-573.10	-618.70
CAediting_242429	ENST00000265322.7	chr2_216038818_-	-574.30	-573.10	-618.70
CAediting_242430	ENST00000265322.7	chr2_216038820_-	-576.30	-573.10	-618.70
CAediting_242431	ENST00000265322.7	chr2_216038821_-	-573.30	-573.10	-618.70
CAediting_242432	ENST00000265322.7	chr2_216038826_-	-575.40	-573.10	-618.70
CAediting_242433	ENST00000265322.7	chr2_216038828_-	-577.40	-573.10	-618.70
CAediting_242434	ENST00000265322.7	chr2_216038829_-	-573.10	-573.10	-618.70
CAediting_242435	ENST00000265322.7	chr2_216038841_-	-574.40	-573.10	-618.70
CAediting_242436	ENST00000265322.7	chr2_216038843_-	-573.10	-573.10	-618.70
CAediting_242437	ENST00000265322.7	chr2_216038844_-	-573.10	-573.10	-618.70
CAediting_242438	ENST00000265322.7	chr2_216038849_-	-574.30	-573.10	-618.70
CAediting_242439	ENST00000265322.7	chr2_216038852_-	-572.40	-573.10	-618.70
CAediting_242440	ENST00000265322.7	chr2_216038857_-	-573.10	-573.10	-618.70
CAediting_242441	ENST00000265322.7	chr2_216038862_-	-572.40	-573.10	-618.70
CAediting_242442	ENST00000265322.7	chr2_216038871_-	-579.00	-573.10	-618.70
CAediting_242443	ENST00000265322.7	chr2_216038875_-	-572.80	-573.10	-618.70
CAediting_242444	ENST00000265322.7	chr2_216038881_-	-577.80	-573.10	-618.70
CAediting_242445	ENST00000265322.7	chr2_216038889_-	-574.60	-573.10	-618.70
CAediting_242446	ENST00000265322.7	chr2_216038892_-	-575.90	-573.10	-618.70
CAediting_242447	ENST00000265322.7	chr2_216038897_-	-575.40	-573.10	-618.70
CAediting_242448	ENST00000265322.7	chr2_216038898_-	-573.20	-573.10	-618.70
CAediting_242449	ENST00000265322.7	chr2_216038906_-	-577.40	-573.10	-618.70
CAediting_242450	ENST00000265322.7	chr2_216038914_-	-573.50	-573.10	-618.70
CAediting_242451	ENST00000265322.7	chr2_216038920_-	-576.60	-573.10	-618.70
CAediting_242452	ENST00000265322.7	chr2_216038932_-	-574.80	-573.10	-618.70

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Relation with ADAR for PECR

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_242426	chr2_216038775_-	.	.	0.0221794528739279	0.22201253276266	.	.
KIRP	CAediting_242426	chr2_216038775_-	0.0473283888007617	0.226778858789587	.	.	.	.
PCPG	CAediting_242426	chr2_216038775_-	.	.	.	.	0.0491381570364219	0.195327353189029
SARC	CAediting_242426	chr2_216038775_-	0.013379740254966	0.320340584761942	.	.	.	.
LGG	CAediting_242431	chr2_216038821_-	.	.	6.32930780296831e-05	0.249724044734903	.	.
BRCA	CAediting_242431	chr2_216038821_-	.	.	0.000901339042397719	0.198724092322416	.	.
STAD	CAediting_242431	chr2_216038821_-	.	.	0.00170045001056526	0.270596152222663	.	.
KIRC	CAediting_242431	chr2_216038821_-	.	.	0.0131801731116109	0.219445188225801	.	.
LGG	CAediting_242448	chr2_216038898_-	.	.	0.00356823537482156	0.312730078814017	.	.

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Relation with cancer stages for PECR

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	clinical_stage	CAediting_242431	chr2_216038821_-	0.0418961261259982	-0.549296681752209
THCA	pathologic_stage	CAediting_242431	chr2_216038821_-	0.0225565679776501	0.245762841225829

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Relation with survival for PECR

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_242426	chr2_216038775_-	0.0497339083351864	0.00052493	0.00103404
LUAD	CAediting_242426	chr2_216038775_-	0.037207801475448	0.00147098	44201.6
STAD	CAediting_242426	chr2_216038775_-	0.0172729683718104	0.00410585	741.471

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RelatedDrugs for PECR

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
PECR	Q9BY49	DB00173	Adenine	Peroxisomal trans-2-enoyl-CoA reductase	SmallMoleculeDrug	approved\|nutraceutical

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RelatedDiseases for PECR

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
PECR	C0020796	Profound Mental Retardation	1	CTD_human
PECR	C0025363	Mental Retardation, Psychosocial	1	CTD_human
PECR	C0917816	Mental deficiency	1	CTD_human
PECR	C3714756	Intellectual Disability	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene