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Editing gene: UTP6 (CAeditome ID:55813)

Gene summary for UTP6

Gene summary

Gene information	Gene symbol	UTP6
	Gene ID	55813
	Gene name	UTP6 small subunit processome component
	Synonyms	C17orf40\|HCA66
	Cytomap	17q11.2
	Type of gene	protein-coding
	Description	U3 small nucleolar RNA-associated protein 6 homologUTP6, small subunit (SSU) processome component, homologhepatocellular carcinoma-associated antigen 66multiple hat domains protein
	Modification date	20210518
	UniProtAcc	Q9NYH9
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
UTP6	GO:0005694	U3 small nucleolar RNA-associated protein 6 homolog	0000052
UTP6	GO:0005730	U3 small nucleolar RNA-associated protein 6 homolog	0000052

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RNA A-to-I events for UTP6

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000108651.8

RNA A-to-I editing events in Cancer.

CAediting_1180227(31861116, -), CAediting_1180228(31861126, -), CAediting_1180229(31861129, -), CAediting_1180230(31861130, -), CAediting_1180231(31861139, -), CAediting_1180232(31861153, -), CAediting_1180233(31861155, -), CAediting_1180234(31861156, -), CAediting_1180235(31861157, -), CAediting_1180236(31861176, -), CAediting_1180237(31861177, -), CAediting_1180238(31861228, -), CAediting_1180239(31861351, -), CAediting_1180240(31861357, -), CAediting_1180241(31861370, -), CAediting_1180242(31861379, -), CAediting_1180243(31861384, -), CAediting_1180244(31861396, -), CAediting_1180245(31861407, -), CAediting_1180246(31861447, -), CAediting_1180247(31861449, -), CAediting_1180248(31861516, -), CAediting_1180249(31861521, -), CAediting_1180250(31861531, -), CAediting_1180251(31861533, -), CAediting_1180252(31861534, -), CAediting_1180253(31861555, -), CAediting_1180254(31861558, -), CAediting_1180255(31861565, -), CAediting_1180256(31861593, -), CAediting_1180257(31862039, -), CAediting_1180258(31862051, -), CAediting_1180259(31862052, -), CAediting_1180260(31862053, -), CAediting_1180261(31862070, -), CAediting_1180262(31862102, -), CAediting_1180263(31862109, -), CAediting_1180264(31862128, -), CAediting_1180265(31862131, -), CAediting_1180266(31862137, -), CAediting_1180267(31862145, -), CAediting_1180268(31862146, -), CAediting_1180269(31862150, -), CAediting_1180270(31862159, -), CAediting_1180271(31862172, -), CAediting_1180272(31862198, -), CAediting_1180273(31862212, -), CAediting_1180274(31862238, -), CAediting_1180275(31862248, -), CAediting_1180276(31862269, -), CAediting_1180277(31862586, -), CAediting_1180278(31862597, -), CAediting_1180279(31862605, -), CAediting_1180280(31862606, -), CAediting_1180281(31862618, -), CAediting_1180282(31862623, -), CAediting_1180283(31862637, -), CAediting_1180284(31862639, -), CAediting_1180285(31862644, -), CAediting_1180286(31862648, -), CAediting_1180287(31862668, -), CAediting_1180288(31862677, -), CAediting_1180289(31862678, -), CAediting_1180290(31862683, -), CAediting_1180291(31862687, -), CAediting_1180292(31862704, -), CAediting_1180293(31862709, -), CAediting_1180294(31862710, -), CAediting_1180295(31862732, -), CAediting_1180296(31862736, -), CAediting_1180297(31862740, -), CAediting_1180298(31862741, -), CAediting_1180299(31862742, -), CAediting_1180300(31862745, -), CAediting_1180301(31862773, -), CAediting_1180302(31862776, -), CAediting_1180303(31862799, -), CAediting_1180304(31862804, -), CAediting_1180305(31862809, -), CAediting_1180306(31862818, -), CAediting_1180307(31862822, -), CAediting_1180308(31862828, -), CAediting_1180309(31862837, -), CAediting_1180310(31862840, -), CAediting_1180311(31862845, -), CAediting_1180312(31862846, -), CAediting_1180313(31862854, -), CAediting_1180314(31862855, -), CAediting_1180315(31863123, -), CAediting_1180316(31863776, -), CAediting_1180317(31863805, -), CAediting_1180318(31864278, -), CAediting_1180319(31864304, -), CAediting_1180320(31868445, -), CAediting_1180321(31868451, -), CAediting_1180322(31868530, -), CAediting_1180323(31868999, -), CAediting_1180324(31869002, -), CAediting_1180325(31869003, -), CAediting_1180326(31869073, -), CAediting_1180327(31869261, -), CAediting_1180328(31869266, -), CAediting_1180329(31869609, -), CAediting_1180330(31871066, -), CAediting_1180331(31871086, -), CAediting_1180332(31871101, -), CAediting_1180333(31871106, -), CAediting_1180334(31871128, -), CAediting_1180335(31872417, -), CAediting_1180336(31872645, -), CAediting_1180337(31872756, -), CAediting_1180338(31872994, -), CAediting_1180339(31873068, -), CAediting_1180340(31873132, -), CAediting_1180341(31873210, -), CAediting_1180342(31887553, -), CAediting_1180343(31888474, -), CAediting_1180344(31889608, -), CAediting_1180345(31889611, -), CAediting_1180346(31889635, -), CAediting_1180347(31890113, -), CAediting_1180348(31890175, -), CAediting_1180349(31890263, -), CAediting_1180350(31890399, -), CAediting_1180351(31890436, -), CAediting_1180352(31890447, -), CAediting_1180353(31890839, -), CAediting_1180354(31890904, -), CAediting_1180355(31894238, -), CAediting_1180356(31896733, -), CAediting_1180357(31897516, -), CAediting_1180358(31897517, -), CAediting_1180359(31897521, -), CAediting_1180360(31897541, -), CAediting_1180361(31897545, -), CAediting_1180362(31897560, -), CAediting_1180363(31897576, -), CAediting_1180364(31897585, -), CAediting_1180365(31897586, -), CAediting_1180366(31897630, -), CAediting_1180367(31897719, -), CAediting_1180368(31898355, -), CAediting_1180369(31899486, -), CAediting_1180370(31899510, -), CAediting_1180371(31899901, -), CAediting_1180372(31899911, -),

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RNA editing positional annotations for UTP6 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1180227	chr17_31861116_-	UTR3
CAediting_1180228	chr17_31861126_-	UTR3
CAediting_1180229	chr17_31861129_-	UTR3
CAediting_1180230	chr17_31861130_-	UTR3
CAediting_1180231	chr17_31861139_-	UTR3
CAediting_1180232	chr17_31861153_-	UTR3
CAediting_1180233	chr17_31861155_-	UTR3
CAediting_1180234	chr17_31861156_-	UTR3
CAediting_1180235	chr17_31861157_-	UTR3
CAediting_1180236	chr17_31861176_-	UTR3
CAediting_1180237	chr17_31861177_-	UTR3
CAediting_1180238	chr17_31861228_-	UTR3
CAediting_1180239	chr17_31861351_-	UTR3
CAediting_1180240	chr17_31861357_-	UTR3
CAediting_1180241	chr17_31861370_-	UTR3
CAediting_1180242	chr17_31861379_-	UTR3
CAediting_1180243	chr17_31861384_-	UTR3
CAediting_1180244	chr17_31861396_-	UTR3
CAediting_1180245	chr17_31861407_-	UTR3
CAediting_1180246	chr17_31861447_-	UTR3
CAediting_1180247	chr17_31861449_-	UTR3
CAediting_1180248	chr17_31861516_-	UTR3
CAediting_1180249	chr17_31861521_-	UTR3
CAediting_1180250	chr17_31861531_-	UTR3
CAediting_1180251	chr17_31861533_-	UTR3
CAediting_1180252	chr17_31861534_-	UTR3
CAediting_1180253	chr17_31861555_-	UTR3
CAediting_1180254	chr17_31861558_-	UTR3
CAediting_1180255	chr17_31861565_-	UTR3
CAediting_1180256	chr17_31861593_-	UTR3
CAediting_1180257	chr17_31862039_-	UTR3
CAediting_1180258	chr17_31862051_-	UTR3
CAediting_1180259	chr17_31862052_-	UTR3
CAediting_1180260	chr17_31862053_-	UTR3
CAediting_1180261	chr17_31862070_-	UTR3
CAediting_1180262	chr17_31862102_-	UTR3
CAediting_1180263	chr17_31862109_-	UTR3
CAediting_1180264	chr17_31862128_-	UTR3
CAediting_1180265	chr17_31862131_-	UTR3
CAediting_1180266	chr17_31862137_-	UTR3
CAediting_1180267	chr17_31862145_-	UTR3
CAediting_1180268	chr17_31862146_-	UTR3
CAediting_1180269	chr17_31862150_-	UTR3
CAediting_1180270	chr17_31862159_-	UTR3
CAediting_1180271	chr17_31862172_-	UTR3
CAediting_1180272	chr17_31862198_-	UTR3
CAediting_1180273	chr17_31862212_-	UTR3
CAediting_1180274	chr17_31862238_-	UTR3
CAediting_1180275	chr17_31862248_-	UTR3
CAediting_1180276	chr17_31862269_-	UTR3
CAediting_1180277	chr17_31862586_-	UTR3
CAediting_1180278	chr17_31862597_-	UTR3
CAediting_1180279	chr17_31862605_-	UTR3
CAediting_1180280	chr17_31862606_-	UTR3
CAediting_1180281	chr17_31862618_-	UTR3
CAediting_1180282	chr17_31862623_-	UTR3
CAediting_1180283	chr17_31862637_-	UTR3
CAediting_1180284	chr17_31862639_-	UTR3
CAediting_1180285	chr17_31862644_-	UTR3
CAediting_1180286	chr17_31862648_-	UTR3
CAediting_1180287	chr17_31862668_-	UTR3
CAediting_1180288	chr17_31862677_-	UTR3
CAediting_1180289	chr17_31862678_-	UTR3
CAediting_1180290	chr17_31862683_-	UTR3
CAediting_1180291	chr17_31862687_-	UTR3
CAediting_1180292	chr17_31862704_-	UTR3
CAediting_1180293	chr17_31862709_-	UTR3
CAediting_1180294	chr17_31862710_-	UTR3
CAediting_1180295	chr17_31862732_-	UTR3
CAediting_1180296	chr17_31862736_-	UTR3
CAediting_1180297	chr17_31862740_-	UTR3
CAediting_1180298	chr17_31862741_-	UTR3
CAediting_1180299	chr17_31862742_-	UTR3
CAediting_1180300	chr17_31862745_-	UTR3
CAediting_1180301	chr17_31862773_-	UTR3
CAediting_1180302	chr17_31862776_-	UTR3
CAediting_1180303	chr17_31862799_-	UTR3
CAediting_1180304	chr17_31862804_-	UTR3
CAediting_1180305	chr17_31862809_-	UTR3
CAediting_1180306	chr17_31862818_-	UTR3
CAediting_1180307	chr17_31862822_-	UTR3
CAediting_1180308	chr17_31862828_-	UTR3
CAediting_1180309	chr17_31862837_-	UTR3
CAediting_1180310	chr17_31862840_-	UTR3
CAediting_1180311	chr17_31862845_-	UTR3
CAediting_1180312	chr17_31862846_-	UTR3
CAediting_1180313	chr17_31862854_-	UTR3
CAediting_1180314	chr17_31862855_-	UTR3
CAediting_1180315	chr17_31863123_-	UTR3
CAediting_1180316	chr17_31863776_-	ncRNA_intronic
CAediting_1180317	chr17_31863805_-	ncRNA_intronic
CAediting_1180318	chr17_31864278_-	ncRNA_intronic
CAediting_1180319	chr17_31864304_-	ncRNA_intronic
CAediting_1180320	chr17_31868445_-	ncRNA_intronic
CAediting_1180321	chr17_31868451_-	ncRNA_intronic
CAediting_1180322	chr17_31868530_-	ncRNA_intronic
CAediting_1180323	chr17_31868999_-	ncRNA_intronic
CAediting_1180324	chr17_31869002_-	ncRNA_intronic
CAediting_1180325	chr17_31869003_-	ncRNA_intronic
CAediting_1180326	chr17_31869073_-	ncRNA_intronic
CAediting_1180327	chr17_31869261_-	ncRNA_intronic
CAediting_1180328	chr17_31869266_-	ncRNA_intronic
CAediting_1180329	chr17_31869609_-	ncRNA_intronic
CAediting_1180330	chr17_31871066_-	ncRNA_intronic
CAediting_1180331	chr17_31871086_-	ncRNA_intronic
CAediting_1180332	chr17_31871101_-	ncRNA_intronic
CAediting_1180333	chr17_31871106_-	ncRNA_intronic
CAediting_1180334	chr17_31871128_-	ncRNA_intronic
CAediting_1180335	chr17_31872417_-	ncRNA_intronic
CAediting_1180336	chr17_31872645_-	ncRNA_intronic
CAediting_1180337	chr17_31872756_-	ncRNA_intronic
CAediting_1180338	chr17_31872994_-	ncRNA_intronic
CAediting_1180339	chr17_31873068_-	ncRNA_intronic
CAediting_1180340	chr17_31873132_-	ncRNA_intronic
CAediting_1180341	chr17_31873210_-	ncRNA_exonic
CAediting_1180342	chr17_31887553_-	ncRNA_exonic
CAediting_1180343	chr17_31888474_-	ncRNA_intronic
CAediting_1180344	chr17_31889608_-	ncRNA_intronic
CAediting_1180345	chr17_31889611_-	ncRNA_intronic
CAediting_1180346	chr17_31889635_-	ncRNA_intronic
CAediting_1180347	chr17_31890113_-	ncRNA_intronic
CAediting_1180348	chr17_31890175_-	ncRNA_intronic
CAediting_1180349	chr17_31890263_-	ncRNA_intronic
CAediting_1180350	chr17_31890399_-	ncRNA_intronic
CAediting_1180351	chr17_31890436_-	ncRNA_intronic
CAediting_1180352	chr17_31890447_-	ncRNA_intronic
CAediting_1180353	chr17_31890839_-	ncRNA_intronic
CAediting_1180354	chr17_31890904_-	ncRNA_intronic
CAediting_1180355	chr17_31894238_-	ncRNA_intronic
CAediting_1180356	chr17_31896733_-	ncRNA_intronic
CAediting_1180357	chr17_31897516_-	ncRNA_intronic
CAediting_1180358	chr17_31897517_-	ncRNA_intronic
CAediting_1180359	chr17_31897521_-	ncRNA_intronic
CAediting_1180360	chr17_31897541_-	ncRNA_intronic
CAediting_1180361	chr17_31897545_-	ncRNA_intronic
CAediting_1180362	chr17_31897560_-	ncRNA_intronic
CAediting_1180363	chr17_31897576_-	ncRNA_intronic
CAediting_1180364	chr17_31897585_-	ncRNA_intronic
CAediting_1180365	chr17_31897586_-	ncRNA_intronic
CAediting_1180366	chr17_31897630_-	ncRNA_intronic
CAediting_1180367	chr17_31897719_-	ncRNA_intronic
CAediting_1180368	chr17_31898355_-	ncRNA_intronic
CAediting_1180369	chr17_31899486_-	ncRNA_intronic
CAediting_1180370	chr17_31899510_-	ncRNA_intronic
CAediting_1180371	chr17_31899901_-	ncRNA_intronic
CAediting_1180372	chr17_31899911_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1180227	chr17_31861116_-	SINE	Alu	AluSx
CAediting_1180228	chr17_31861126_-	SINE	Alu	AluSx
CAediting_1180229	chr17_31861129_-	SINE	Alu	AluSx
CAediting_1180230	chr17_31861130_-	SINE	Alu	AluSx
CAediting_1180231	chr17_31861139_-	SINE	Alu	AluSx
CAediting_1180232	chr17_31861153_-	SINE	Alu	AluSx
CAediting_1180233	chr17_31861155_-	SINE	Alu	AluSx
CAediting_1180234	chr17_31861156_-	SINE	Alu	AluSx
CAediting_1180235	chr17_31861157_-	SINE	Alu	AluSx
CAediting_1180236	chr17_31861176_-	SINE	Alu	AluSx
CAediting_1180237	chr17_31861177_-	SINE	Alu	AluSx
CAediting_1180238	chr17_31861228_-	SINE	Alu	AluSx
CAediting_1180239	chr17_31861351_-	SINE	Alu	AluJo
CAediting_1180240	chr17_31861357_-	SINE	Alu	AluJo
CAediting_1180241	chr17_31861370_-	SINE	Alu	AluJo
CAediting_1180242	chr17_31861379_-	SINE	Alu	AluJo
CAediting_1180243	chr17_31861384_-	SINE	Alu	AluJo
CAediting_1180244	chr17_31861396_-	SINE	Alu	AluJo
CAediting_1180245	chr17_31861407_-	SINE	Alu	AluJo
CAediting_1180246	chr17_31861447_-	SINE	Alu	AluJo
CAediting_1180247	chr17_31861449_-	SINE	Alu	AluJo
CAediting_1180248	chr17_31861516_-	SINE	Alu	AluJo
CAediting_1180249	chr17_31861521_-	SINE	Alu	AluJo
CAediting_1180250	chr17_31861531_-	SINE	Alu	AluJo
CAediting_1180251	chr17_31861533_-	SINE	Alu	AluJo
CAediting_1180252	chr17_31861534_-	SINE	Alu	AluJo
CAediting_1180253	chr17_31861555_-	SINE	Alu	AluJo
CAediting_1180254	chr17_31861558_-	SINE	Alu	AluJo
CAediting_1180255	chr17_31861565_-	SINE	Alu	AluJo
CAediting_1180256	chr17_31861593_-	SINE	Alu	AluJo
CAediting_1180257	chr17_31862039_-	SINE	Alu	AluSg4
CAediting_1180258	chr17_31862051_-	SINE	Alu	AluSg4
CAediting_1180259	chr17_31862052_-	SINE	Alu	AluSg4
CAediting_1180260	chr17_31862053_-	SINE	Alu	AluSg4
CAediting_1180261	chr17_31862070_-	SINE	Alu	AluSg4
CAediting_1180262	chr17_31862102_-	SINE	Alu	AluSg4
CAediting_1180263	chr17_31862109_-	SINE	Alu	AluSg4
CAediting_1180264	chr17_31862128_-	SINE	Alu	AluSg4
CAediting_1180265	chr17_31862131_-	SINE	Alu	AluSg4
CAediting_1180266	chr17_31862137_-	SINE	Alu	AluSg4
CAediting_1180267	chr17_31862145_-	SINE	Alu	AluSg4
CAediting_1180268	chr17_31862146_-	SINE	Alu	AluSg4
CAediting_1180269	chr17_31862150_-	SINE	Alu	AluSg4
CAediting_1180270	chr17_31862159_-	SINE	Alu	AluSg4
CAediting_1180271	chr17_31862172_-	SINE	Alu	AluSg4
CAediting_1180272	chr17_31862198_-	SINE	Alu	AluSg4
CAediting_1180273	chr17_31862212_-	SINE	Alu	AluSg4
CAediting_1180274	chr17_31862238_-	SINE	Alu	AluSg4
CAediting_1180275	chr17_31862248_-	SINE	Alu	AluSg4
CAediting_1180276	chr17_31862269_-	SINE	Alu	AluSg4
CAediting_1180277	chr17_31862586_-	SINE	Alu	AluSq2
CAediting_1180278	chr17_31862597_-	SINE	Alu	AluSq2
CAediting_1180279	chr17_31862605_-	SINE	Alu	AluSq2
CAediting_1180280	chr17_31862606_-	SINE	Alu	AluSq2
CAediting_1180281	chr17_31862618_-	SINE	Alu	AluSq2
CAediting_1180282	chr17_31862623_-	SINE	Alu	AluSq2
CAediting_1180283	chr17_31862637_-	SINE	Alu	AluSq2
CAediting_1180284	chr17_31862639_-	SINE	Alu	AluSq2
CAediting_1180285	chr17_31862644_-	SINE	Alu	AluSq2
CAediting_1180286	chr17_31862648_-	SINE	Alu	AluSq2
CAediting_1180287	chr17_31862668_-	SINE	Alu	AluSq2
CAediting_1180288	chr17_31862677_-	SINE	Alu	AluSq2
CAediting_1180289	chr17_31862678_-	SINE	Alu	AluSq2
CAediting_1180290	chr17_31862683_-	SINE	Alu	AluSq2
CAediting_1180291	chr17_31862687_-	SINE	Alu	AluSq2
CAediting_1180292	chr17_31862704_-	SINE	Alu	AluSq2
CAediting_1180293	chr17_31862709_-	SINE	Alu	AluSq2
CAediting_1180294	chr17_31862710_-	SINE	Alu	AluSq2
CAediting_1180295	chr17_31862732_-	SINE	Alu	AluSq2
CAediting_1180296	chr17_31862736_-	SINE	Alu	AluSq2
CAediting_1180297	chr17_31862740_-	SINE	Alu	AluSq2
CAediting_1180298	chr17_31862741_-	SINE	Alu	AluSq2
CAediting_1180299	chr17_31862742_-	SINE	Alu	AluSq2
CAediting_1180300	chr17_31862745_-	SINE	Alu	AluSq2
CAediting_1180301	chr17_31862773_-	SINE	Alu	AluSq2
CAediting_1180302	chr17_31862776_-	SINE	Alu	AluSq2
CAediting_1180303	chr17_31862799_-	SINE	Alu	AluSq2
CAediting_1180304	chr17_31862804_-	SINE	Alu	AluSq2
CAediting_1180305	chr17_31862809_-	SINE	Alu	AluSq2
CAediting_1180306	chr17_31862818_-	SINE	Alu	AluSq2
CAediting_1180307	chr17_31862822_-	SINE	Alu	AluSq2
CAediting_1180308	chr17_31862828_-	SINE	Alu	AluSq2
CAediting_1180309	chr17_31862837_-	SINE	Alu	AluSq2
CAediting_1180310	chr17_31862840_-	SINE	Alu	AluSq2
CAediting_1180311	chr17_31862845_-	SINE	Alu	AluSq2
CAediting_1180312	chr17_31862846_-	SINE	Alu	AluSq2
CAediting_1180313	chr17_31862854_-	SINE	Alu	AluSq2
CAediting_1180314	chr17_31862855_-	SINE	Alu	AluSq2
CAediting_1180315	chr17_31863123_-	SINE	Alu	FLAM_C
CAediting_1180316	chr17_31863776_-	SINE	Alu	AluJb
CAediting_1180317	chr17_31863805_-	SINE	Alu	AluJb
CAediting_1180318	chr17_31864278_-	SINE	Alu	AluSz6
CAediting_1180319	chr17_31864304_-	SINE	Alu	AluSz6
CAediting_1180320	chr17_31868445_-	SINE	Alu	AluJo
CAediting_1180321	chr17_31868451_-	SINE	Alu	AluJo
CAediting_1180322	chr17_31868530_-	SINE	Alu	AluJo
CAediting_1180323	chr17_31868999_-	SINE	Alu	AluSx1
CAediting_1180324	chr17_31869002_-	SINE	Alu	AluSx1
CAediting_1180325	chr17_31869003_-	SINE	Alu	AluSx1
CAediting_1180326	chr17_31869073_-	SINE	Alu	AluSx1
CAediting_1180327	chr17_31869261_-	SINE	Alu	AluJo
CAediting_1180328	chr17_31869266_-	SINE	Alu	AluJo
CAediting_1180329	chr17_31869609_-	SINE	Alu	FRAM
CAediting_1180330	chr17_31871066_-	SINE	Alu	AluY
CAediting_1180331	chr17_31871086_-	SINE	Alu	AluY
CAediting_1180332	chr17_31871101_-	SINE	Alu	AluY
CAediting_1180333	chr17_31871106_-	SINE	Alu	AluY
CAediting_1180334	chr17_31871128_-	SINE	Alu	AluY
CAediting_1180335	chr17_31872417_-	SINE	Alu	AluJo
CAediting_1180336	chr17_31872645_-	SINE	Alu	AluJo
CAediting_1180337	chr17_31872756_-	SINE	Alu	AluSz
CAediting_1180338	chr17_31872994_-	SINE	Alu	AluSx1
CAediting_1180339	chr17_31873068_-	SINE	Alu	AluSx1
CAediting_1180340	chr17_31873132_-	SINE	Alu	AluSx1
CAediting_1180341	chr17_31873210_-	SINE	Alu	AluSx1
CAediting_1180342	chr17_31887553_-	SINE	Alu	AluJr
CAediting_1180343	chr17_31888474_-	SINE	Alu	AluSx
CAediting_1180344	chr17_31889608_-	SINE	Alu	AluY
CAediting_1180345	chr17_31889611_-	SINE	Alu	AluY
CAediting_1180346	chr17_31889635_-	SINE	Alu	AluY
CAediting_1180347	chr17_31890113_-	SINE	Alu	AluJb
CAediting_1180348	chr17_31890175_-	SINE	Alu	AluJb
CAediting_1180349	chr17_31890263_-	SINE	Alu	AluJb
CAediting_1180350	chr17_31890399_-	SINE	Alu	AluSz
CAediting_1180351	chr17_31890436_-	SINE	Alu	AluSz
CAediting_1180352	chr17_31890447_-	SINE	Alu	AluSz
CAediting_1180353	chr17_31890839_-	SINE	Alu	AluSz6
CAediting_1180354	chr17_31890904_-	SINE	Alu	AluSz6
CAediting_1180355	chr17_31894238_-	SINE	Alu	AluSz6
CAediting_1180356	chr17_31896733_-	SINE	Alu	AluJb
CAediting_1180357	chr17_31897516_-	SINE	Alu	AluSq2
CAediting_1180358	chr17_31897517_-	SINE	Alu	AluSq2
CAediting_1180359	chr17_31897521_-	SINE	Alu	AluSq2
CAediting_1180360	chr17_31897541_-	SINE	Alu	AluSq2
CAediting_1180361	chr17_31897545_-	SINE	Alu	AluSq2
CAediting_1180362	chr17_31897560_-	SINE	Alu	AluSq2
CAediting_1180363	chr17_31897576_-	SINE	Alu	AluSq2
CAediting_1180364	chr17_31897585_-	SINE	Alu	AluSq2
CAediting_1180365	chr17_31897586_-	SINE	Alu	AluSq2
CAediting_1180366	chr17_31897630_-	SINE	Alu	AluSq2
CAediting_1180367	chr17_31897719_-	SINE	Alu	AluSq2
CAediting_1180368	chr17_31898355_-	SINE	Alu	AluSg7
CAediting_1180369	chr17_31899486_-	SINE	Alu	AluSx3
CAediting_1180370	chr17_31899510_-	SINE	Alu	AluSx3
CAediting_1180371	chr17_31899901_-	SINE	Alu	AluSc
CAediting_1180372	chr17_31899911_-	SINE	Alu	AluSc

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RNA A-to-I editing events in the alternative splicing sites for UTP6

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000108651.8.UTP6.

Correlation between RNA A-to-I editing and PSI for ENSG00000108651.8.UTP6.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for UTP6

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for UTP6

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for UTP6

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for UTP6

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for UTP6

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_1180233	chr17_31861155_-	.	.	.	.	4.48286428211046e-05	0.396252391948394
PRAD	CAediting_1180233	chr17_31861155_-	.	.	0.0207689806744118	0.169906927424462	.	.
UCEC	CAediting_1180233	chr17_31861155_-	.	.	.	.	0.0304858199845178	0.253467865165333
KIRP	CAediting_1180233	chr17_31861155_-	.	.	0.000107328506534721	0.468604565101817	.	.
SKCM	CAediting_1180233	chr17_31861155_-	.	.	0.00206857357608403	0.297327613003828	.	.
BLCA	CAediting_1180236	chr17_31861176_-	.	.	.	.	0.0269503810762751	0.306799760580908
SKCM	CAediting_1180236	chr17_31861176_-	0.0160629010784733	0.320408339519842	.	.	.	.
BLCA	CAediting_1180243	chr17_31861384_-	3.97512081112116e-05	0.439879692417503	.	.	.	.
CESC	CAediting_1180243	chr17_31861384_-	0.0194249619006998	0.260878433981942	.	.	.	.
GBM	CAediting_1180243	chr17_31861384_-	0.0353728744812755	0.269958755621726	.	.	.	.
HNSC	CAediting_1180243	chr17_31861384_-	0.0123329050263589	0.301948063198914	.	.	.	.
KIRP	CAediting_1180243	chr17_31861384_-	0.0498132562303922	0.265822913016899	.	.	.	.
SKCM	CAediting_1180243	chr17_31861384_-	0.0049305027766194	0.262745094360497	.	.	0.00012402810368263	0.353265687969186
TGCT	CAediting_1180243	chr17_31861384_-	0.000155193797467484	0.401244039221964	.	.	.	.

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Relation with cancer stages for UTP6

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_1180233	chr17_31861155_-	0.011787631701286	0.133913692008418
CESC	clinical_stage	CAediting_1180233	chr17_31861155_-	0.0480935132484886	0.232172260865907
LIHC	pathologic_stage	CAediting_1180233	chr17_31861155_-	0.0247428683275146	-0.272177241951706
TGCT	clinical_stage	CAediting_1180236	chr17_31861176_-	0.0237064552397335	-0.34444847921204
TGCT	pathologic_stage	CAediting_1180236	chr17_31861176_-	0.00954500829189622	-0.390912252288048
THCA	pathologic_stage	CAediting_1180233	chr17_31861155_-	0.00272212649655946	0.26912511766078

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Relation with survival for UTP6

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
BRCA	CAediting_1180306	chr17_31862818_-	0.0332809946955982	0.0365637	0.000193635

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RelatedDrugs for UTP6

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for UTP6

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene