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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CHFR (CAeditome ID:55743)

Gene summary for CHFR

check button Gene summary
Gene informationGene symbol

CHFR

Gene ID

55743

Gene namecheckpoint with forkhead and ring finger domains
SynonymsRNF116|RNF196
Cytomap

12q24.33

Type of geneprotein-coding
DescriptionE3 ubiquitin-protein ligase CHFRRING finger protein 196RING-type E3 ubiquitin transferase CHFRcheckpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase
Modification date20210518
UniProtAcc

Q96EP1

Context- 31812083(Silencing of CHFR Sensitizes Gastric Carcinoma to PARP Inhibitor Treatment)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CHFR

GO:0000166

E3 ubiquitin-protein ligase CHFR

18172500

CHFR

GO:0004842

E3 ubiquitin-protein ligase CHFR

18172500

CHFR

GO:0004842

E3 ubiquitin-protein ligase CHFR

19182791

CHFR

GO:0000209

E3 ubiquitin-protein ligase CHFR

19182791

CHFR

GO:0019941

E3 ubiquitin-protein ligase CHFR

19182791

CHFR

GO:0005634

E3 ubiquitin-protein ligase CHFR

18172500

CHFR

GO:0016605

E3 ubiquitin-protein ligase CHFR

15467728


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RNA A-to-I events for CHFR

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000072609.16
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_949487(132823804, -), CAediting_949488(132823838, -), CAediting_949489(132833688, -), CAediting_949490(132833750, -), CAediting_949491(132833755, -), CAediting_949492(132833760, -), CAediting_949493(132840898, -), CAediting_949494(132844423, -), CAediting_949495(132844769, -), CAediting_949496(132844795, -), CAediting_949497(132844906, -), CAediting_949498(132844914, -), CAediting_949499(132845291, -), CAediting_949500(132845359, -), CAediting_949501(132845406, -), CAediting_949502(132845525, -), CAediting_949503(132845593, -), CAediting_949504(132846374, -), CAediting_949505(132846401, -), CAediting_949506(132846637, -), CAediting_949507(132846651, -), CAediting_949508(132846698, -), CAediting_949509(132846780, -), CAediting_949510(132846836, -), CAediting_949511(132850158, -), CAediting_949512(132854585, -), CAediting_949513(132854706, -), CAediting_949514(132854743, -), CAediting_949515(132854744, -), CAediting_949516(132854948, -), CAediting_949517(132855048, -), CAediting_949518(132855120, -), CAediting_949519(132855300, -), CAediting_949520(132855310, -), CAediting_949521(132855312, -), CAediting_949522(132855480, -), CAediting_949523(132855555, -), CAediting_949524(132855567, -), CAediting_949525(132855605, -), CAediting_949526(132855610, -), CAediting_949527(132855615, -), CAediting_949528(132862093, -), CAediting_949529(132862110, -), CAediting_949530(132862153, -), CAediting_949531(132862163, -), CAediting_949532(132862175, -), CAediting_949533(132862189, -), CAediting_949534(132862192, -), CAediting_949535(132862231, -), CAediting_949536(132862315, -), CAediting_949537(132862345, -), CAediting_949538(132862349, -), CAediting_949539(132862363, -), CAediting_949540(132862389, -), CAediting_949541(132862390, -), CAediting_949542(132862401, -), CAediting_949543(132862425, -), CAediting_949544(132862427, -), CAediting_949545(132862482, -), CAediting_949546(132862492, -), CAediting_949547(132862568, -), CAediting_949548(132862718, -), CAediting_949549(132863251, -), CAediting_949550(132863423, -), CAediting_949551(132863686, -), CAediting_949552(132863795, -), CAediting_949553(132863826, -), CAediting_949554(132863827, -), CAediting_949555(132863848, -), CAediting_949556(132863867, -), CAediting_949557(132863876, -), CAediting_949558(132863883, -), CAediting_949559(132863897, -), CAediting_949560(132863903, -), CAediting_949561(132863905, -), CAediting_949562(132863923, -), CAediting_949563(132863932, -), CAediting_949564(132863940, -), CAediting_949565(132863941, -), CAediting_949566(132863942, -), CAediting_949567(132863959, -), CAediting_949568(132863960, -), CAediting_949569(132863990, -), CAediting_949570(132864037, -), CAediting_949571(132864043, -), CAediting_949572(132864521, -), CAediting_949573(132864524, -), CAediting_949574(132864557, -), CAediting_949575(132864585, -), CAediting_949576(132864653, -), CAediting_949577(132864659, -), CAediting_949578(132864684, -), CAediting_949579(132864685, -), CAediting_949580(132864708, -), CAediting_949581(132864760, -), CAediting_949582(132865420, -), CAediting_949583(132865452, -), CAediting_949584(132865457, -), CAediting_949585(132865493, -), CAediting_949586(132865505, -), CAediting_949587(132865511, -), CAediting_949588(132865521, -), CAediting_949589(132865533, -), CAediting_949590(132865537, -), CAediting_949591(132865541, -), CAediting_949592(132865546, -), CAediting_949593(132865566, -), CAediting_949594(132865568, -), CAediting_949595(132865576, -), CAediting_949596(132865577, -), CAediting_949597(132865600, -), CAediting_949598(132865619, -), CAediting_949599(132865624, -), CAediting_949600(132865693, -), CAediting_949601(132865694, -), CAediting_949602(132865698, -), CAediting_949603(132865720, -), CAediting_949604(132865736, -), CAediting_949605(132865738, -), CAediting_949606(132865745, -), CAediting_949607(132865757, -), CAediting_949608(132865768, -), CAediting_949609(132865772, -), CAediting_949610(132865775, -), CAediting_949611(132865781, -), CAediting_949612(132865797, -), CAediting_949613(132865798, -), CAediting_949614(132865806, -), CAediting_949615(132865828, -), CAediting_949616(132865833, -), CAediting_949617(132865893, -), CAediting_949618(132865916, -), CAediting_949619(132865925, -), CAediting_949620(132865947, -), CAediting_949621(132865955, -), CAediting_949622(132865965, -), CAediting_949623(132866443, -), CAediting_949624(132866462, -), CAediting_949625(132866495, -), CAediting_949626(132866507, -), CAediting_949627(132866525, -), CAediting_949628(132866542, -), CAediting_949629(132866561, -), CAediting_949630(132866615, -), CAediting_949631(132866630, -), CAediting_949632(132866642, -), CAediting_949633(132866660, -), CAediting_949634(132866707, -), CAediting_949635(132866726, -), CAediting_949636(132866736, -), CAediting_949637(132866766, -), CAediting_949638(132866868, -), CAediting_949639(132866884, -), CAediting_949640(132866887, -), CAediting_949641(132866922, -), CAediting_949642(132866925, -), CAediting_949643(132866934, -), CAediting_949644(132866947, -), CAediting_949645(132866951, -), CAediting_949646(132866952, -), CAediting_949647(132866971, -), CAediting_949648(132866972, -), CAediting_949649(132867028, -), CAediting_949650(132868301, -), CAediting_949651(132868362, -), CAediting_949652(132869785, -), CAediting_949653(132870163, -), CAediting_949654(132870171, -), CAediting_949655(132870574, -), CAediting_949656(132871648, -), CAediting_949657(132871660, -), CAediting_949658(132871740, -), CAediting_949659(132875454, -), CAediting_949660(132875501, -), CAediting_949661(132875511, -), CAediting_949662(132875540, -), CAediting_949663(132875620, -), CAediting_949664(132875970, -), CAediting_949665(132876012, -), CAediting_949666(132876129, -), CAediting_949667(132876132, -), CAediting_949668(132876144, -), CAediting_949669(132876860, -), CAediting_949670(132878630, -), CAediting_949671(132879184, -), CAediting_949672(132879199, -), CAediting_949673(132879528, -), CAediting_949674(132879555, -), CAediting_949675(132879594, -), CAediting_949676(132881207, -), CAediting_949677(132882820, -), CAediting_949678(132882830, -), CAediting_949679(132882901, -), CAediting_949680(132883326, -), CAediting_949681(132883343, -), CAediting_949682(132883868, -), CAediting_949683(132884106, -), CAediting_949684(132886228, -), CAediting_949685(132902330, -), CAediting_949686(132902334, -), CAediting_949687(132907822, -), CAediting_949688(132918585, -), CAediting_949689(132918649, -), CAediting_949690(132918673, -), CAediting_949691(132918677, -), CAediting_949692(132918678, -), CAediting_949693(132918681, -), CAediting_949694(132918683, -), CAediting_949695(132918687, -), CAediting_949696(132918717, -), CAediting_949697(132918718, -), CAediting_949698(132918719, -), CAediting_949699(132918725, -), CAediting_949700(132918774, -), CAediting_949701(132918779, -), CAediting_949702(132918781, -), CAediting_949703(132918782, -), CAediting_949704(132918789, -), CAediting_949705(132918790, -), CAediting_949706(132918805, -), CAediting_949707(132918850, -), CAediting_949708(132918881, -), CAediting_949709(132919290, -), CAediting_949710(132919292, -), CAediting_949711(132919421, -), CAediting_949712(132919457, -), CAediting_949713(132919466, -), CAediting_949714(132919864, -), CAediting_949715(132919872, -), CAediting_949716(132919938, -), CAediting_949717(132919953, -), CAediting_949718(132919980, -), CAediting_949719(132920004, -), CAediting_949720(132920104, -), CAediting_949721(132920110, -), CAediting_949722(132920111, -), CAediting_949723(132920763, -), CAediting_949724(132920768, -), CAediting_949725(132920773, -), CAediting_949726(132925856, -), CAediting_949727(132925874, -), CAediting_949728(132928777, -), CAediting_949729(132928782, -), CAediting_949730(132928791, -), CAediting_949731(132928809, -), CAediting_949732(132928815, -), CAediting_949733(132928820, -), CAediting_949734(132928829, -), CAediting_949735(132928840, -), CAediting_949736(132928893, -), CAediting_949737(132928905, -), CAediting_949738(132928908, -), CAediting_949739(132928953, -), CAediting_949740(132928959, -), CAediting_949741(132929000, -), CAediting_949742(132929173, -), CAediting_949743(132929186, -), CAediting_949744(132929203, -), CAediting_949745(132929204, -), CAediting_949746(132929225, -), CAediting_949747(132929228, -), CAediting_949748(132929240, -), CAediting_949749(132929285, -), CAediting_949750(132929295, -), CAediting_949751(132929299, -), CAediting_949752(132929690, -), CAediting_949753(132929702, -), CAediting_949754(132929776, -), CAediting_949755(132929823, -), CAediting_949756(132929836, -), CAediting_949757(132929845, -), CAediting_949758(132929863, -), CAediting_949759(132929882, -), CAediting_949760(132930133, -), CAediting_949761(132930142, -), CAediting_949762(132930177, -), CAediting_949763(132930179, -), CAediting_949764(132930187, -), CAediting_949765(132930195, -), CAediting_949766(132930222, -), CAediting_949767(132930229, -), CAediting_949768(132930233, -), CAediting_949769(132930280, -), CAediting_949770(132930284, -), CAediting_949771(132930285, -), CAediting_949772(132930290, -), CAediting_949773(132930306, -), CAediting_949774(132930307, -), CAediting_949775(132930919, -), CAediting_949776(132930965, -), CAediting_949777(132930976, -), CAediting_949778(132931001, -), CAediting_949779(132931006, -), CAediting_949780(132931009, -), CAediting_949781(132931013, -), CAediting_949782(132931015, -), CAediting_949783(132931084, -), CAediting_949784(132931101, -), CAediting_949785(132931128, -), CAediting_949786(132931130, -), CAediting_949787(132931144, -), CAediting_949788(132931173, -), CAediting_949789(132931174, -), CAediting_949790(132932006, -), CAediting_949791(132932016, -), CAediting_949792(132932017, -), CAediting_949793(132932052, -), CAediting_949794(132932056, -), CAediting_949795(132932068, -), CAediting_949796(132932141, -), CAediting_949797(132932177, -), CAediting_949798(132932178, -), CAediting_949799(132932240, -), CAediting_949800(132932243, -), CAediting_949801(132934276, -), CAediting_949802(132934281, -), CAediting_949803(132934696, -), CAediting_949804(132943106, -), CAediting_949805(132943173, -), CAediting_949806(132943181, -), CAediting_949807(132944248, -), CAediting_949808(132945141, -), CAediting_949809(132946538, -), CAediting_949810(132946552, -), CAediting_949811(132947592, -), CAediting_949812(132947958, -), CAediting_949813(132947968, -), CAediting_949814(132947995, -), CAediting_949815(132953698, -), CAediting_949816(132953706, -),

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RNA editing positional annotations for CHFR using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_949543chr12_132862425_-nonsynonymous SNVENST00000266880.10c.A404Gp.E135GDBD

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_949487chr12_132823804_-ncRNA_intronic
CAediting_949488chr12_132823838_-ncRNA_intronic
CAediting_949489chr12_132833688_-ncRNA_intronic
CAediting_949490chr12_132833750_-ncRNA_intronic
CAediting_949491chr12_132833755_-ncRNA_intronic
CAediting_949492chr12_132833760_-ncRNA_intronic
CAediting_949493chr12_132840898_-ncRNA_exonic
CAediting_949494chr12_132844423_-ncRNA_intronic
CAediting_949495chr12_132844769_-ncRNA_intronic
CAediting_949496chr12_132844795_-ncRNA_intronic
CAediting_949497chr12_132844906_-ncRNA_intronic
CAediting_949498chr12_132844914_-ncRNA_intronic
CAediting_949499chr12_132845291_-ncRNA_intronic
CAediting_949500chr12_132845359_-ncRNA_intronic
CAediting_949501chr12_132845406_-ncRNA_intronic
CAediting_949502chr12_132845525_-ncRNA_intronic
CAediting_949503chr12_132845593_-ncRNA_intronic
CAediting_949504chr12_132846374_-ncRNA_intronic
CAediting_949505chr12_132846401_-ncRNA_intronic
CAediting_949506chr12_132846637_-ncRNA_intronic
CAediting_949507chr12_132846651_-ncRNA_intronic
CAediting_949508chr12_132846698_-ncRNA_intronic
CAediting_949509chr12_132846780_-ncRNA_intronic
CAediting_949510chr12_132846836_-ncRNA_intronic
CAediting_949511chr12_132850158_-ncRNA_intronic
CAediting_949512chr12_132854585_-ncRNA_exonic
CAediting_949513chr12_132854706_-ncRNA_exonic
CAediting_949514chr12_132854743_-ncRNA_exonic
CAediting_949515chr12_132854744_-ncRNA_exonic
CAediting_949516chr12_132854948_-ncRNA_exonic
CAediting_949517chr12_132855048_-ncRNA_exonic
CAediting_949518chr12_132855120_-intronic
CAediting_949519chr12_132855300_-intronic
CAediting_949520chr12_132855310_-intronic
CAediting_949521chr12_132855312_-intronic
CAediting_949522chr12_132855480_-intronic
CAediting_949523chr12_132855555_-intronic
CAediting_949524chr12_132855567_-intronic
CAediting_949525chr12_132855605_-intronic
CAediting_949526chr12_132855610_-intronic
CAediting_949527chr12_132855615_-intronic
CAediting_949528chr12_132862093_-intronic
CAediting_949529chr12_132862110_-intronic
CAediting_949530chr12_132862153_-intronic
CAediting_949531chr12_132862163_-intronic
CAediting_949532chr12_132862175_-intronic
CAediting_949533chr12_132862189_-intronic
CAediting_949534chr12_132862192_-intronic
CAediting_949535chr12_132862231_-intronic
CAediting_949536chr12_132862315_-intronic
CAediting_949537chr12_132862345_-exonic
CAediting_949538chr12_132862349_-exonic
CAediting_949539chr12_132862363_-exonic
CAediting_949540chr12_132862389_-exonic
CAediting_949541chr12_132862390_-exonic
CAediting_949542chr12_132862401_-exonic
CAediting_949543chr12_132862425_-exonic
CAediting_949544chr12_132862427_-splicing
CAediting_949545chr12_132862482_-intronic
CAediting_949546chr12_132862492_-intronic
CAediting_949547chr12_132862568_-intronic
CAediting_949548chr12_132862718_-intronic
CAediting_949549chr12_132863251_-intronic
CAediting_949550chr12_132863423_-intronic
CAediting_949551chr12_132863686_-intronic
CAediting_949552chr12_132863795_-intronic
CAediting_949553chr12_132863826_-intronic
CAediting_949554chr12_132863827_-intronic
CAediting_949555chr12_132863848_-intronic
CAediting_949556chr12_132863867_-intronic
CAediting_949557chr12_132863876_-intronic
CAediting_949558chr12_132863883_-intronic
CAediting_949559chr12_132863897_-intronic
CAediting_949560chr12_132863903_-intronic
CAediting_949561chr12_132863905_-intronic
CAediting_949562chr12_132863923_-intronic
CAediting_949563chr12_132863932_-intronic
CAediting_949564chr12_132863940_-intronic
CAediting_949565chr12_132863941_-intronic
CAediting_949566chr12_132863942_-intronic
CAediting_949567chr12_132863959_-intronic
CAediting_949568chr12_132863960_-intronic
CAediting_949569chr12_132863990_-intronic
CAediting_949570chr12_132864037_-intronic
CAediting_949571chr12_132864043_-intronic
CAediting_949572chr12_132864521_-intronic
CAediting_949573chr12_132864524_-intronic
CAediting_949574chr12_132864557_-intronic
CAediting_949575chr12_132864585_-intronic
CAediting_949576chr12_132864653_-intronic
CAediting_949577chr12_132864659_-intronic
CAediting_949578chr12_132864684_-intronic
CAediting_949579chr12_132864685_-intronic
CAediting_949580chr12_132864708_-intronic
CAediting_949581chr12_132864760_-intronic
CAediting_949582chr12_132865420_-intronic
CAediting_949583chr12_132865452_-intronic
CAediting_949584chr12_132865457_-intronic
CAediting_949585chr12_132865493_-intronic
CAediting_949586chr12_132865505_-intronic
CAediting_949587chr12_132865511_-intronic
CAediting_949588chr12_132865521_-intronic
CAediting_949589chr12_132865533_-intronic
CAediting_949590chr12_132865537_-intronic
CAediting_949591chr12_132865541_-intronic
CAediting_949592chr12_132865546_-intronic
CAediting_949593chr12_132865566_-intronic
CAediting_949594chr12_132865568_-intronic
CAediting_949595chr12_132865576_-intronic
CAediting_949596chr12_132865577_-intronic
CAediting_949597chr12_132865600_-intronic
CAediting_949598chr12_132865619_-intronic
CAediting_949599chr12_132865624_-intronic
CAediting_949600chr12_132865693_-intronic
CAediting_949601chr12_132865694_-intronic
CAediting_949602chr12_132865698_-intronic
CAediting_949603chr12_132865720_-intronic
CAediting_949604chr12_132865736_-intronic
CAediting_949605chr12_132865738_-intronic
CAediting_949606chr12_132865745_-intronic
CAediting_949607chr12_132865757_-intronic
CAediting_949608chr12_132865768_-intronic
CAediting_949609chr12_132865772_-intronic
CAediting_949610chr12_132865775_-intronic
CAediting_949611chr12_132865781_-intronic
CAediting_949612chr12_132865797_-intronic
CAediting_949613chr12_132865798_-intronic
CAediting_949614chr12_132865806_-intronic
CAediting_949615chr12_132865828_-intronic
CAediting_949616chr12_132865833_-intronic
CAediting_949617chr12_132865893_-ncRNA_exonic
CAediting_949618chr12_132865916_-ncRNA_exonic
CAediting_949619chr12_132865925_-ncRNA_exonic
CAediting_949620chr12_132865947_-ncRNA_exonic
CAediting_949621chr12_132865955_-ncRNA_exonic
CAediting_949622chr12_132865965_-ncRNA_exonic
CAediting_949623chr12_132866443_-ncRNA_exonic
CAediting_949624chr12_132866462_-ncRNA_exonic
CAediting_949625chr12_132866495_-ncRNA_exonic
CAediting_949626chr12_132866507_-ncRNA_exonic
CAediting_949627chr12_132866525_-ncRNA_exonic
CAediting_949628chr12_132866542_-ncRNA_exonic
CAediting_949629chr12_132866561_-ncRNA_exonic
CAediting_949630chr12_132866615_-ncRNA_exonic
CAediting_949631chr12_132866630_-ncRNA_exonic
CAediting_949632chr12_132866642_-ncRNA_exonic
CAediting_949633chr12_132866660_-ncRNA_exonic
CAediting_949634chr12_132866707_-ncRNA_exonic
CAediting_949635chr12_132866726_-ncRNA_exonic
CAediting_949636chr12_132866736_-ncRNA_exonic
CAediting_949637chr12_132866766_-ncRNA_exonic
CAediting_949638chr12_132866868_-ncRNA_exonic
CAediting_949639chr12_132866884_-ncRNA_exonic
CAediting_949640chr12_132866887_-ncRNA_exonic
CAediting_949641chr12_132866922_-ncRNA_exonic
CAediting_949642chr12_132866925_-ncRNA_exonic
CAediting_949643chr12_132866934_-ncRNA_exonic
CAediting_949644chr12_132866947_-ncRNA_exonic
CAediting_949645chr12_132866951_-ncRNA_exonic
CAediting_949646chr12_132866952_-ncRNA_exonic
CAediting_949647chr12_132866971_-ncRNA_exonic
CAediting_949648chr12_132866972_-ncRNA_exonic
CAediting_949649chr12_132867028_-ncRNA_exonic
CAediting_949650chr12_132868301_-intronic
CAediting_949651chr12_132868362_-intronic
CAediting_949652chr12_132869785_-exonic
CAediting_949653chr12_132870163_-intronic
CAediting_949654chr12_132870171_-intronic
CAediting_949655chr12_132870574_-intronic
CAediting_949656chr12_132871648_-ncRNA_intronic
CAediting_949657chr12_132871660_-ncRNA_intronic
CAediting_949658chr12_132871740_-ncRNA_intronic
CAediting_949659chr12_132875454_-ncRNA_intronic
CAediting_949660chr12_132875501_-ncRNA_intronic
CAediting_949661chr12_132875511_-ncRNA_intronic
CAediting_949662chr12_132875540_-ncRNA_intronic
CAediting_949663chr12_132875620_-ncRNA_intronic
CAediting_949664chr12_132875970_-ncRNA_intronic
CAediting_949665chr12_132876012_-ncRNA_intronic
CAediting_949666chr12_132876129_-ncRNA_intronic
CAediting_949667chr12_132876132_-ncRNA_intronic
CAediting_949668chr12_132876144_-ncRNA_intronic
CAediting_949669chr12_132876860_-ncRNA_intronic
CAediting_949670chr12_132878630_-ncRNA_intronic
CAediting_949671chr12_132879184_-ncRNA_intronic
CAediting_949672chr12_132879199_-ncRNA_intronic
CAediting_949673chr12_132879528_-ncRNA_intronic
CAediting_949674chr12_132879555_-ncRNA_intronic
CAediting_949675chr12_132879594_-ncRNA_intronic
CAediting_949676chr12_132881207_-ncRNA_intronic
CAediting_949677chr12_132882820_-ncRNA_intronic
CAediting_949678chr12_132882830_-ncRNA_intronic
CAediting_949679chr12_132882901_-ncRNA_intronic
CAediting_949680chr12_132883326_-ncRNA_intronic
CAediting_949681chr12_132883343_-ncRNA_intronic
CAediting_949682chr12_132883868_-ncRNA_intronic
CAediting_949683chr12_132884106_-ncRNA_intronic
CAediting_949684chr12_132886228_-ncRNA_intronic
CAediting_949685chr12_132902330_-ncRNA_intronic
CAediting_949686chr12_132902334_-ncRNA_intronic
CAediting_949687chr12_132907822_-ncRNA_intronic
CAediting_949688chr12_132918585_-UTR3
CAediting_949689chr12_132918649_-UTR3
CAediting_949690chr12_132918673_-UTR3
CAediting_949691chr12_132918677_-UTR3
CAediting_949692chr12_132918678_-UTR3
CAediting_949693chr12_132918681_-UTR3
CAediting_949694chr12_132918683_-UTR3
CAediting_949695chr12_132918687_-UTR3
CAediting_949696chr12_132918717_-UTR3
CAediting_949697chr12_132918718_-UTR3
CAediting_949698chr12_132918719_-UTR3
CAediting_949699chr12_132918725_-UTR3
CAediting_949700chr12_132918774_-UTR3
CAediting_949701chr12_132918779_-UTR3
CAediting_949702chr12_132918781_-UTR3
CAediting_949703chr12_132918782_-UTR3
CAediting_949704chr12_132918789_-UTR3
CAediting_949705chr12_132918790_-UTR3
CAediting_949706chr12_132918805_-UTR3
CAediting_949707chr12_132918850_-UTR3
CAediting_949708chr12_132918881_-UTR3
CAediting_949709chr12_132919290_-UTR3
CAediting_949710chr12_132919292_-UTR3
CAediting_949711chr12_132919421_-UTR3
CAediting_949712chr12_132919457_-UTR3
CAediting_949713chr12_132919466_-UTR3
CAediting_949714chr12_132919864_-UTR3
CAediting_949715chr12_132919872_-UTR3
CAediting_949716chr12_132919938_-UTR3
CAediting_949717chr12_132919953_-UTR3
CAediting_949718chr12_132919980_-UTR3
CAediting_949719chr12_132920004_-UTR3
CAediting_949720chr12_132920104_-UTR3
CAediting_949721chr12_132920110_-UTR3
CAediting_949722chr12_132920111_-UTR3
CAediting_949723chr12_132920763_-UTR3
CAediting_949724chr12_132920768_-UTR3
CAediting_949725chr12_132920773_-UTR3
CAediting_949726chr12_132925856_-exonic
CAediting_949727chr12_132925874_-exonic
CAediting_949728chr12_132928777_-ncRNA_intronic
CAediting_949729chr12_132928782_-ncRNA_intronic
CAediting_949730chr12_132928791_-ncRNA_intronic
CAediting_949731chr12_132928809_-ncRNA_intronic
CAediting_949732chr12_132928815_-ncRNA_intronic
CAediting_949733chr12_132928820_-ncRNA_intronic
CAediting_949734chr12_132928829_-ncRNA_intronic
CAediting_949735chr12_132928840_-ncRNA_intronic
CAediting_949736chr12_132928893_-ncRNA_intronic
CAediting_949737chr12_132928905_-ncRNA_intronic
CAediting_949738chr12_132928908_-ncRNA_intronic
CAediting_949739chr12_132928953_-ncRNA_intronic
CAediting_949740chr12_132928959_-ncRNA_intronic
CAediting_949741chr12_132929000_-ncRNA_intronic
CAediting_949742chr12_132929173_-ncRNA_intronic
CAediting_949743chr12_132929186_-ncRNA_intronic
CAediting_949744chr12_132929203_-ncRNA_intronic
CAediting_949745chr12_132929204_-ncRNA_intronic
CAediting_949746chr12_132929225_-ncRNA_intronic
CAediting_949747chr12_132929228_-ncRNA_intronic
CAediting_949748chr12_132929240_-ncRNA_intronic
CAediting_949749chr12_132929285_-ncRNA_intronic
CAediting_949750chr12_132929295_-ncRNA_intronic
CAediting_949751chr12_132929299_-ncRNA_intronic
CAediting_949752chr12_132929690_-ncRNA_intronic
CAediting_949753chr12_132929702_-ncRNA_intronic
CAediting_949754chr12_132929776_-ncRNA_intronic
CAediting_949755chr12_132929823_-ncRNA_intronic
CAediting_949756chr12_132929836_-ncRNA_intronic
CAediting_949757chr12_132929845_-ncRNA_intronic
CAediting_949758chr12_132929863_-ncRNA_intronic
CAediting_949759chr12_132929882_-ncRNA_intronic
CAediting_949760chr12_132930133_-ncRNA_intronic
CAediting_949761chr12_132930142_-ncRNA_intronic
CAediting_949762chr12_132930177_-ncRNA_intronic
CAediting_949763chr12_132930179_-ncRNA_intronic
CAediting_949764chr12_132930187_-ncRNA_intronic
CAediting_949765chr12_132930195_-ncRNA_intronic
CAediting_949766chr12_132930222_-ncRNA_intronic
CAediting_949767chr12_132930229_-ncRNA_intronic
CAediting_949768chr12_132930233_-ncRNA_intronic
CAediting_949769chr12_132930280_-ncRNA_intronic
CAediting_949770chr12_132930284_-ncRNA_intronic
CAediting_949771chr12_132930285_-ncRNA_intronic
CAediting_949772chr12_132930290_-ncRNA_intronic
CAediting_949773chr12_132930306_-ncRNA_intronic
CAediting_949774chr12_132930307_-ncRNA_intronic
CAediting_949775chr12_132930919_-ncRNA_intronic
CAediting_949776chr12_132930965_-ncRNA_intronic
CAediting_949777chr12_132930976_-ncRNA_intronic
CAediting_949778chr12_132931001_-ncRNA_intronic
CAediting_949779chr12_132931006_-ncRNA_intronic
CAediting_949780chr12_132931009_-ncRNA_intronic
CAediting_949781chr12_132931013_-ncRNA_intronic
CAediting_949782chr12_132931015_-ncRNA_intronic
CAediting_949783chr12_132931084_-ncRNA_intronic
CAediting_949784chr12_132931101_-ncRNA_intronic
CAediting_949785chr12_132931128_-ncRNA_intronic
CAediting_949786chr12_132931130_-ncRNA_intronic
CAediting_949787chr12_132931144_-ncRNA_intronic
CAediting_949788chr12_132931173_-ncRNA_intronic
CAediting_949789chr12_132931174_-ncRNA_intronic
CAediting_949790chr12_132932006_-ncRNA_intronic
CAediting_949791chr12_132932016_-ncRNA_intronic
CAediting_949792chr12_132932017_-ncRNA_intronic
CAediting_949793chr12_132932052_-ncRNA_intronic
CAediting_949794chr12_132932056_-ncRNA_intronic
CAediting_949795chr12_132932068_-ncRNA_intronic
CAediting_949796chr12_132932141_-ncRNA_intronic
CAediting_949797chr12_132932177_-ncRNA_intronic
CAediting_949798chr12_132932178_-ncRNA_intronic
CAediting_949799chr12_132932240_-ncRNA_intronic
CAediting_949800chr12_132932243_-ncRNA_intronic
CAediting_949801chr12_132934276_-ncRNA_intronic
CAediting_949802chr12_132934281_-ncRNA_intronic
CAediting_949803chr12_132934696_-ncRNA_intronic
CAediting_949804chr12_132943106_-ncRNA_intronic
CAediting_949805chr12_132943173_-ncRNA_intronic
CAediting_949806chr12_132943181_-ncRNA_intronic
CAediting_949807chr12_132944248_-ncRNA_intronic
CAediting_949808chr12_132945141_-ncRNA_exonic
CAediting_949809chr12_132946538_-ncRNA_intronic
CAediting_949810chr12_132946552_-ncRNA_intronic
CAediting_949811chr12_132947592_-ncRNA_intronic
CAediting_949812chr12_132947958_-ncRNA_intronic
CAediting_949813chr12_132947968_-ncRNA_intronic
CAediting_949814chr12_132947995_-ncRNA_intronic
CAediting_949815chr12_132953698_-ncRNA_intronic
CAediting_949816chr12_132953706_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_949487chr12_132823804_-SINEAluAluSz
CAediting_949488chr12_132823838_-SINEAluAluSz
CAediting_949489chr12_132833688_-SINEAluAluJb
CAediting_949490chr12_132833750_-SINEAluAluJb
CAediting_949491chr12_132833755_-SINEAluAluJb
CAediting_949492chr12_132833760_-SINEAluAluJb
CAediting_949494chr12_132844423_-SINEAluAluY
CAediting_949495chr12_132844769_-SINEAluAluSx
CAediting_949496chr12_132844795_-SINEAluAluSx
CAediting_949497chr12_132844906_-SINEAluAluSx
CAediting_949498chr12_132844914_-SINEAluAluSx
CAediting_949499chr12_132845291_-SINEAluAluSg4
CAediting_949500chr12_132845359_-SINEAluAluSg4
CAediting_949501chr12_132845406_-SINEAluAluSg4
CAediting_949502chr12_132845525_-SINEAluAluJb
CAediting_949503chr12_132845593_-SINEAluAluJb
CAediting_949504chr12_132846374_-SINEAluAluY
CAediting_949505chr12_132846401_-SINEAluAluY
CAediting_949506chr12_132846637_-SINEAluAluSq
CAediting_949507chr12_132846651_-SINEAluAluSq
CAediting_949508chr12_132846698_-SINEAluAluSq
CAediting_949509chr12_132846780_-SINEAluAluSq
CAediting_949510chr12_132846836_-SINEAluAluSq
CAediting_949511chr12_132850158_-SINEAluAluY
CAediting_949512chr12_132854585_-SINEAluAluY
CAediting_949513chr12_132854706_-SINEAluAluY
CAediting_949514chr12_132854743_-SINEAluAluY
CAediting_949515chr12_132854744_-SINEAluAluY
CAediting_949516chr12_132854948_-SINEAluAluSx
CAediting_949517chr12_132855048_-SINEAluAluSz
CAediting_949518chr12_132855120_-SINEAluAluSz
CAediting_949519chr12_132855300_-SINEAluAluSx
CAediting_949520chr12_132855310_-SINEAluAluSx
CAediting_949521chr12_132855312_-SINEAluAluSx
CAediting_949522chr12_132855480_-SINEAluAluSc
CAediting_949523chr12_132855555_-SINEAluAluSc
CAediting_949524chr12_132855567_-SINEAluAluSc
CAediting_949525chr12_132855605_-SINEAluAluSc
CAediting_949526chr12_132855610_-SINEAluAluSc
CAediting_949527chr12_132855615_-SINEAluAluSc
CAediting_949528chr12_132862093_-SINEAluAluSq
CAediting_949529chr12_132862110_-SINEAluAluSq
CAediting_949530chr12_132862153_-SINEAluAluSq
CAediting_949531chr12_132862163_-SINEAluAluSq
CAediting_949532chr12_132862175_-SINEAluAluSq
CAediting_949533chr12_132862189_-SINEAluAluSq
CAediting_949534chr12_132862192_-SINEAluAluSq
CAediting_949535chr12_132862231_-SINEAluAluSq
CAediting_949536chr12_132862315_-SINEAluAluJo
CAediting_949537chr12_132862345_-SINEAluAluJo
CAediting_949538chr12_132862349_-SINEAluAluJo
CAediting_949539chr12_132862363_-SINEAluAluJo
CAediting_949540chr12_132862389_-SINEAluAluJo
CAediting_949541chr12_132862390_-SINEAluAluJo
CAediting_949542chr12_132862401_-SINEAluAluJo
CAediting_949543chr12_132862425_-SINEAluAluJo
CAediting_949544chr12_132862427_-SINEAluAluJo
CAediting_949545chr12_132862482_-SINEAluAluJo
CAediting_949546chr12_132862492_-SINEAluAluJo
CAediting_949547chr12_132862568_-SINEAluAluJo
CAediting_949548chr12_132862718_-SINEAluAluY
CAediting_949549chr12_132863251_-SINEAluAluSq2
CAediting_949550chr12_132863423_-SINEAluAluSq2
CAediting_949552chr12_132863795_-SINEAluAluJo
CAediting_949553chr12_132863826_-SINEAluAluJo
CAediting_949554chr12_132863827_-SINEAluAluJo
CAediting_949555chr12_132863848_-SINEAluAluJo
CAediting_949556chr12_132863867_-SINEAluAluJo
CAediting_949557chr12_132863876_-SINEAluAluJo
CAediting_949558chr12_132863883_-SINEAluAluJo
CAediting_949559chr12_132863897_-SINEAluAluJo
CAediting_949560chr12_132863903_-SINEAluAluJo
CAediting_949561chr12_132863905_-SINEAluAluJo
CAediting_949562chr12_132863923_-SINEAluAluJo
CAediting_949563chr12_132863932_-SINEAluAluJo
CAediting_949564chr12_132863940_-SINEAluAluJo
CAediting_949565chr12_132863941_-SINEAluAluJo
CAediting_949566chr12_132863942_-SINEAluAluJo
CAediting_949567chr12_132863959_-SINEAluAluJo
CAediting_949568chr12_132863960_-SINEAluAluJo
CAediting_949569chr12_132863990_-SINEAluAluJo
CAediting_949570chr12_132864037_-SINEAluAluJo
CAediting_949571chr12_132864043_-SINEAluAluJo
CAediting_949572chr12_132864521_-SINEAluAluSx1
CAediting_949573chr12_132864524_-SINEAluAluSx1
CAediting_949574chr12_132864557_-SINEAluAluSx1
CAediting_949575chr12_132864585_-SINEAluAluSx1
CAediting_949576chr12_132864653_-SINEAluAluSx1
CAediting_949577chr12_132864659_-SINEAluAluSx1
CAediting_949578chr12_132864684_-SINEAluAluSx1
CAediting_949579chr12_132864685_-SINEAluAluSx1
CAediting_949580chr12_132864708_-SINEAluAluSx1
CAediting_949581chr12_132864760_-SINEAluAluSx1
CAediting_949582chr12_132865420_-SINEAluAluSx1
CAediting_949583chr12_132865452_-SINEAluAluSx1
CAediting_949584chr12_132865457_-SINEAluAluSx1
CAediting_949585chr12_132865493_-SINEAluAluSx1
CAediting_949586chr12_132865505_-SINEAluAluSx1
CAediting_949587chr12_132865511_-SINEAluAluSx1
CAediting_949588chr12_132865521_-SINEAluAluSx1
CAediting_949589chr12_132865533_-SINEAluAluSx1
CAediting_949590chr12_132865537_-SINEAluAluSx1
CAediting_949591chr12_132865541_-SINEAluAluSx1
CAediting_949592chr12_132865546_-SINEAluAluSx1
CAediting_949593chr12_132865566_-SINEAluAluSx1
CAediting_949594chr12_132865568_-SINEAluAluSx1
CAediting_949595chr12_132865576_-SINEAluAluSx1
CAediting_949596chr12_132865577_-SINEAluAluSx1
CAediting_949597chr12_132865600_-SINEAluAluSx1
CAediting_949598chr12_132865619_-SINEAluAluSx1
CAediting_949599chr12_132865624_-SINEAluAluSx1
CAediting_949600chr12_132865693_-SINEAluAluJb
CAediting_949601chr12_132865694_-SINEAluAluJb
CAediting_949602chr12_132865698_-SINEAluAluJb
CAediting_949603chr12_132865720_-SINEAluAluJb
CAediting_949604chr12_132865736_-SINEAluAluJb
CAediting_949605chr12_132865738_-SINEAluAluJb
CAediting_949606chr12_132865745_-SINEAluAluJb
CAediting_949607chr12_132865757_-SINEAluAluJb
CAediting_949608chr12_132865768_-SINEAluAluJb
CAediting_949609chr12_132865772_-SINEAluAluJb
CAediting_949610chr12_132865775_-SINEAluAluJb
CAediting_949611chr12_132865781_-SINEAluAluJb
CAediting_949612chr12_132865797_-SINEAluAluJb
CAediting_949613chr12_132865798_-SINEAluAluJb
CAediting_949614chr12_132865806_-SINEAluAluJb
CAediting_949615chr12_132865828_-SINEAluAluJb
CAediting_949616chr12_132865833_-SINEAluAluJb
CAediting_949617chr12_132865893_-SINEAluAluJb
CAediting_949618chr12_132865916_-SINEAluAluJb
CAediting_949619chr12_132865925_-SINEAluAluJb
CAediting_949620chr12_132865947_-SINEAluAluJb
CAediting_949621chr12_132865955_-SINEAluAluJb
CAediting_949622chr12_132865965_-SINEAluAluJb
CAediting_949638chr12_132866868_-SINEAluAluSx
CAediting_949639chr12_132866884_-SINEAluAluSx
CAediting_949640chr12_132866887_-SINEAluAluSx
CAediting_949641chr12_132866922_-SINEAluAluSx
CAediting_949642chr12_132866925_-SINEAluAluSx
CAediting_949643chr12_132866934_-SINEAluAluSx
CAediting_949644chr12_132866947_-SINEAluAluSx
CAediting_949645chr12_132866951_-SINEAluAluSx
CAediting_949646chr12_132866952_-SINEAluAluSx
CAediting_949647chr12_132866971_-SINEAluAluSx
CAediting_949648chr12_132866972_-SINEAluAluSx
CAediting_949649chr12_132867028_-SINEAluAluSx
CAediting_949650chr12_132868301_-SINEAluAluY
CAediting_949651chr12_132868362_-SINEAluAluY
CAediting_949653chr12_132870163_-SINEAluAluY
CAediting_949654chr12_132870171_-SINEAluAluY
CAediting_949655chr12_132870574_-SINEAluAluSx3
CAediting_949656chr12_132871648_-SINEAluAluSp
CAediting_949657chr12_132871660_-SINEAluAluSp
CAediting_949658chr12_132871740_-SINEAluAluSp
CAediting_949659chr12_132875454_-SINEAluAluSx1
CAediting_949660chr12_132875501_-SINEAluAluSx1
CAediting_949661chr12_132875511_-SINEAluAluSx1
CAediting_949662chr12_132875540_-SINEAluAluSx1
CAediting_949663chr12_132875620_-SINEAluAluSx1
CAediting_949664chr12_132875970_-SINEAluAluSx
CAediting_949665chr12_132876012_-SINEAluAluSx
CAediting_949666chr12_132876129_-SINEAluAluSx
CAediting_949667chr12_132876132_-SINEAluAluSx
CAediting_949668chr12_132876144_-SINEAluAluSx
CAediting_949669chr12_132876860_-SINEAluAluSp
CAediting_949670chr12_132878630_-SINEAluAluY
CAediting_949671chr12_132879184_-SINEAluAluSx3
CAediting_949672chr12_132879199_-SINEAluAluSx3
CAediting_949673chr12_132879528_-SINEAluAluSc
CAediting_949674chr12_132879555_-SINEAluAluSc
CAediting_949675chr12_132879594_-SINEAluAluSc
CAediting_949676chr12_132881207_-SINEAluAluSz
CAediting_949677chr12_132882820_-SINEAluAluJo
CAediting_949678chr12_132882830_-SINEAluAluJo
CAediting_949679chr12_132882901_-SINEAluAluJo
CAediting_949680chr12_132883326_-SINEAluAluSq2
CAediting_949681chr12_132883343_-SINEAluAluSq2
CAediting_949682chr12_132883868_-SINEAluAluSz
CAediting_949683chr12_132884106_-SINEAluAluSz
CAediting_949684chr12_132886228_-SINEAluAluSz
CAediting_949685chr12_132902330_-SINEAluAluSx
CAediting_949686chr12_132902334_-SINEAluAluSx
CAediting_949687chr12_132907822_-SINEAluAluSg
CAediting_949688chr12_132918585_-SINEAluAluSz
CAediting_949689chr12_132918649_-SINEAluAluSz
CAediting_949690chr12_132918673_-SINEAluAluSz
CAediting_949691chr12_132918677_-SINEAluAluSz
CAediting_949692chr12_132918678_-SINEAluAluSz
CAediting_949693chr12_132918681_-SINEAluAluSz
CAediting_949694chr12_132918683_-SINEAluAluSz
CAediting_949695chr12_132918687_-SINEAluAluSz
CAediting_949696chr12_132918717_-SINEAluAluSz
CAediting_949697chr12_132918718_-SINEAluAluSz
CAediting_949698chr12_132918719_-SINEAluAluSz
CAediting_949699chr12_132918725_-SINEAluAluSz
CAediting_949700chr12_132918774_-SINEAluAluSz
CAediting_949701chr12_132918779_-SINEAluAluSz
CAediting_949702chr12_132918781_-SINEAluAluSz
CAediting_949703chr12_132918782_-SINEAluAluSz
CAediting_949704chr12_132918789_-SINEAluAluSz
CAediting_949705chr12_132918790_-SINEAluAluSz
CAediting_949706chr12_132918805_-SINEAluAluSz
CAediting_949707chr12_132918850_-SINEAluAluSz
CAediting_949708chr12_132918881_-SINEAluAluSz
CAediting_949709chr12_132919290_-SINEAluAluJo
CAediting_949710chr12_132919292_-SINEAluAluJo
CAediting_949711chr12_132919421_-SINEAluAluY
CAediting_949712chr12_132919457_-SINEAluAluY
CAediting_949713chr12_132919466_-SINEAluAluY
CAediting_949714chr12_132919864_-SINEAluAluSx4
CAediting_949715chr12_132919872_-SINEAluAluSx4
CAediting_949716chr12_132919938_-SINEAluAluSx4
CAediting_949717chr12_132919953_-SINEAluAluSx4
CAediting_949718chr12_132919980_-SINEAluAluSx4
CAediting_949719chr12_132920004_-SINEAluAluSx4
CAediting_949720chr12_132920104_-SINEAluAluSx4
CAediting_949721chr12_132920110_-SINEAluAluSx4
CAediting_949722chr12_132920111_-SINEAluAluSx4
CAediting_949723chr12_132920763_-SINEAluAluJo
CAediting_949724chr12_132920768_-SINEAluAluJo
CAediting_949725chr12_132920773_-SINEAluAluJo
CAediting_949728chr12_132928777_-SINEAluAluJb
CAediting_949729chr12_132928782_-SINEAluAluJb
CAediting_949730chr12_132928791_-SINEAluAluJb
CAediting_949731chr12_132928809_-SINEAluAluJb
CAediting_949732chr12_132928815_-SINEAluAluJb
CAediting_949733chr12_132928820_-SINEAluAluJb
CAediting_949734chr12_132928829_-SINEAluAluJb
CAediting_949735chr12_132928840_-SINEAluAluJb
CAediting_949736chr12_132928893_-SINEAluAluJb
CAediting_949737chr12_132928905_-SINEAluAluJb
CAediting_949738chr12_132928908_-SINEAluAluJb
CAediting_949739chr12_132928953_-SINEAluAluJb
CAediting_949740chr12_132928959_-SINEAluAluJb
CAediting_949741chr12_132929000_-SINEAluAluJb
CAediting_949742chr12_132929173_-SINEAluAluJb
CAediting_949743chr12_132929186_-SINEAluAluJb
CAediting_949744chr12_132929203_-SINEAluAluJb
CAediting_949745chr12_132929204_-SINEAluAluJb
CAediting_949746chr12_132929225_-SINEAluAluJb
CAediting_949747chr12_132929228_-SINEAluAluJb
CAediting_949748chr12_132929240_-SINEAluAluJb
CAediting_949749chr12_132929285_-SINEAluAluJb
CAediting_949750chr12_132929295_-SINEAluAluJb
CAediting_949751chr12_132929299_-SINEAluAluJb
CAediting_949752chr12_132929690_-SINEAluAluSc
CAediting_949753chr12_132929702_-SINEAluAluSc
CAediting_949754chr12_132929776_-SINEAluAluSc
CAediting_949755chr12_132929823_-SINEAluAluSc
CAediting_949756chr12_132929836_-SINEAluAluSc
CAediting_949757chr12_132929845_-SINEAluAluSc
CAediting_949758chr12_132929863_-SINEAluAluSc
CAediting_949759chr12_132929882_-SINEAluAluSc
CAediting_949760chr12_132930133_-SINEAluAluJr
CAediting_949761chr12_132930142_-SINEAluAluJr
CAediting_949762chr12_132930177_-SINEAluAluJr
CAediting_949763chr12_132930179_-SINEAluAluJr
CAediting_949764chr12_132930187_-SINEAluAluJr
CAediting_949765chr12_132930195_-SINEAluAluJr
CAediting_949766chr12_132930222_-SINEAluAluJr
CAediting_949767chr12_132930229_-SINEAluAluJr
CAediting_949768chr12_132930233_-SINEAluAluJr
CAediting_949769chr12_132930280_-SINEAluAluJr
CAediting_949770chr12_132930284_-SINEAluAluJr
CAediting_949771chr12_132930285_-SINEAluAluJr
CAediting_949772chr12_132930290_-SINEAluAluJr
CAediting_949773chr12_132930306_-SINEAluAluJr
CAediting_949774chr12_132930307_-SINEAluAluJr
CAediting_949776chr12_132930965_-SINEAluAluJb
CAediting_949777chr12_132930976_-SINEAluAluJb
CAediting_949778chr12_132931001_-SINEAluAluJb
CAediting_949779chr12_132931006_-SINEAluAluJb
CAediting_949780chr12_132931009_-SINEAluAluJb
CAediting_949781chr12_132931013_-SINEAluAluJb
CAediting_949782chr12_132931015_-SINEAluAluJb
CAediting_949783chr12_132931084_-SINEAluAluJb
CAediting_949784chr12_132931101_-SINEAluAluJb
CAediting_949785chr12_132931128_-SINEAluAluJb
CAediting_949786chr12_132931130_-SINEAluAluJb
CAediting_949787chr12_132931144_-SINEAluAluJb
CAediting_949788chr12_132931173_-SINEAluAluJb
CAediting_949789chr12_132931174_-SINEAluAluJb
CAediting_949790chr12_132932006_-SINEAluAluJr
CAediting_949791chr12_132932016_-SINEAluAluJr
CAediting_949792chr12_132932017_-SINEAluAluJr
CAediting_949793chr12_132932052_-SINEAluAluJr
CAediting_949794chr12_132932056_-SINEAluAluJr
CAediting_949795chr12_132932068_-SINEAluAluJr
CAediting_949796chr12_132932141_-SINEAluAluJr
CAediting_949797chr12_132932177_-SINEAluAluJr
CAediting_949798chr12_132932178_-SINEAluAluJr
CAediting_949799chr12_132932240_-SINEAluAluJr
CAediting_949800chr12_132932243_-SINEAluAluJr
CAediting_949801chr12_132934276_-SINEAluAluSx1
CAediting_949802chr12_132934281_-SINEAluAluSx1
CAediting_949803chr12_132934696_-SINEAluAluSx
CAediting_949804chr12_132943106_-SINEAluAluY
CAediting_949805chr12_132943173_-SINEAluAluY
CAediting_949806chr12_132943181_-SINEAluAluY
CAediting_949807chr12_132944248_-SINEAluFRAM
CAediting_949808chr12_132945141_-SINEAluAluSz6
CAediting_949809chr12_132946538_-LINEL1L1MEh
CAediting_949810chr12_132946552_-LINEL1L1MEh
CAediting_949811chr12_132947592_-SINEAluAluJb
CAediting_949812chr12_132947958_-LINEL1L1MEh
CAediting_949813chr12_132947968_-LINEL1L1MEh
CAediting_949815chr12_132953698_-SINEAluAluSc
CAediting_949816chr12_132953706_-SINEAluAluSc

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RNA A-to-I editing events in the alternative splicing sites for CHFR

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_949543chr12_132862425_-132862423:1328624453SS1+0iCTTTTTTGTATTTTTTGTAGAGA8.21CTTTTTTGTATTTTTTGTAGGGA9.34
MEX_1CAediting_949543chr12_132862425_-132862423:1328624453SS1+0iCTTTTTTGTATTTTTTGTAGAGA8.21CTTTTTTGTATTTTTTGTAGGGA9.34
ESCAediting_949544chr12_132862427_-132862423:1328624453SS0+2iCTTTTTTGTATTTTTTGTAGAGA8.21CTTTTTTGTATTTTTTGTGGAGA0.25
MEX_1CAediting_949544chr12_132862427_-132862423:1328624453SS0+2iCTTTTTTGTATTTTTTGTAGAGA8.21CTTTTTTGTATTTTTTGTGGAGA0.25
ESCAediting_949652chr12_132869785_-132869781:1328698033SS0+2iCAAAGATACCTCAGGTGCAGGTG-2.7CAAAGATACCTCAGGTGCGGGTG-10.65
IRCAediting_949652chr12_132869785_-132869781:1328698033SS0+2iCAAAGATACCTCAGGTGCAGGTG-2.7CAAAGATACCTCAGGTGCGGGTG-10.65
MEX_2CAediting_949652chr12_132869785_-132869781:1328698033SS0+2iCAAAGATACCTCAGGTGCAGGTG-2.7CAAAGATACCTCAGGTGCGGGTG-10.65
ESCAediting_949663chr12_132875620_-132875618:1328756403SS1+0iCTTTTTTTCTCTTTTTTGAGACG4.05CTTTTTTTCTCTTTTTTGAGGCG5.6

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000072609.16.CHFR.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000072609.16.CHFR.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CHFR

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CHFR

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.
all structure


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The effects of the RNA editing to the miRNA binding sites for CHFR

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_949492chr12_132833760_-ENSG00000072609.16ENST00000266880hsa-miR-45371328337551328337628mer-1a132833755132833777147.00-22.65
CAediting_949489chr12_132833688_-ENSG00000072609.16ENST00000266880hsa-miR-100-5p1328336851328336917mer-m8132833684132833704160.00-22.54
CAediting_949489chr12_132833688_-ENSG00000072609.16ENST00000266880hsa-miR-99a-5p1328336851328336917mer-m8132833684132833704160.00-21.42
CAediting_949489chr12_132833688_-ENSG00000072609.16ENST00000266880hsa-miR-99b-5p1328336851328336917mer-m8132833684132833705152.00-26.22
CAediting_949493chr12_132840898_-ENSG00000072609.16ENST00000266880hsa-miR-6461328408921328408998mer-1a132840892132840910140.00-12.83
CAediting_949493chr12_132840898_-ENSG00000072609.16ENST00000443047hsa-miR-6461328408921328408998mer-1a132840892132840910140.00-12.83

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_949489chr12_132833688_-ENSG00000072609.16ENST00000266880hsa-miR-20b-3p1328336871328336937mer-m8132833686132833708153-18.04
CAediting_949492chr12_132833760_-ENSG00000072609.16ENST00000266880hsa-miR-3160-3p1328337551328337628mer-1a132833755132833776144-15
CAediting_949492chr12_132833760_-ENSG00000072609.16ENST00000266880hsa-miR-3160-3p1328337551328337628mer-1a132833755132833776144-15
CAediting_949490chr12_132833750_-ENSG00000072609.16ENST00000266880hsa-miR-39291328337461328337516mer132833745132833767143-26.66
CAediting_949493chr12_132840898_-ENSG00000072609.16ENST00000266880hsa-miR-43281328408951328409017mer-m8132840894132840910140-8.34
CAediting_949492chr12_132833760_-ENSG00000072609.16ENST00000266880hsa-miR-6719-3p1328337591328337657mer-m8132833758132833780147-19.09
CAediting_949489chr12_132833688_-ENSG00000072609.16ENST00000266880hsa-miR-6804-3p1328336821328336898mer-1a132833682132833704155-18.77
CAediting_949493chr12_132840898_-ENSG00000072609.16ENST00000443047hsa-miR-43281328408951328409017mer-m8132840894132840910140-8.34

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000072609.16ENST00000266880hsa-miR-605-3p1328341301328341367mer-m8132834129132834150140-16.01
CAediting_846604chr11_93733708_-ENSG00000072609.16ENST00000266880hsa-miR-1304-3p1328334621328334687mer-m8132833461132833482148-17.17
CAediting_846604chr11_93733708_-ENSG00000072609.16ENST00000266880hsa-miR-1304-3p1328330691328330757mer-m8132833068132833089146-21.98
CAediting_980496chr14_31014685_-ENSG00000072609.16ENST00000266880hsa-miR-624-3p1328342791328342868mer-1a132834279132834299144-13.62
CAediting_393chr1_1167164_+ENSG00000072609.16ENST00000266880hsa-miR-200b-3p1328410831328410897mer-m8132841082132841101147-13.02
CAediting_688080chr9_63819626_+ENSG00000072609.16ENST00000266880hsa-miR-4477b1328387641328387707mer-m8132838763132838784145-13.36
CAediting_688080chr9_63819626_+ENSG00000072609.16ENST00000266880hsa-miR-4477b1328339201328339278mer-1a132833920132833940154-11.52
CAediting_688081chr9_63819627_+ENSG00000072609.16ENST00000266880hsa-miR-4477b1328396181328396247mer-m8132839617132839638149-13.41
CAediting_393chr1_1167164_+ENSG00000072609.16ENST00000443047hsa-miR-200b-3p1328410831328410897mer-m8132841082132841101147-13.02
CAediting_393chr1_1167164_+ENSG00000072609.16ENST00000315585hsa-miR-200b-3p1328410831328410897mer-m8132841082132841101147-13.02
CAediting_393chr1_1167164_+ENSG00000072609.16ENST00000432561hsa-miR-200b-3p1328410831328410897mer-m8132841082132841101147-13.02
CAediting_1054808chr15_66496985_-ENSG00000072609.16ENST00000266880hsa-miR-45121328402881328402958mer-1a132840288132840309159-23.62
CAediting_1054808chr15_66496985_-ENSG00000072609.16ENST00000266880hsa-miR-45121328380031328380108mer-1a132838003132838024145-20.55
CAediting_1229414chr17_67471546_+ENSG00000072609.16ENST00000266880hsa-miR-548aa1328391271328391337mer-m8132839126132839148159-17.87
CAediting_1229414chr17_67471546_+ENSG00000072609.16ENST00000266880hsa-miR-548aa1328336171328336237mer-m8132833616132833640140-12.81
CAediting_1160181chr17_7017644_-ENSG00000072609.16ENST00000266880hsa-miR-195-3p1328411591328411657mer-m8132841158132841182142-14.02
CAediting_1368054chr19_46709310_-ENSG00000072609.16ENST00000266880hsa-miR-320e1328374401328374467mer-1a132837440132837457140-19.3
CAediting_86358chr1_109598906_+ENSG00000072609.16ENST00000266880hsa-miR-197-5p1328384081328384147mer-m8132838407132838430148-22.82
CAediting_86358chr1_109598906_+ENSG00000072609.16ENST00000266880hsa-miR-197-5p1328371681328371747mer-m8132837167132837186155-28.46
CAediting_228905chr2_188297554_+ENSG00000072609.16ENST00000266880hsa-miR-561-3p1328356601328356656mer132835659132835680152-20.9
CAediting_396018chr5_1062918_-ENSG00000072609.16ENST00000266880hsa-miR-46351328387621328387698mer-1a132838762132838783145-13.89
CAediting_396018chr5_1062918_-ENSG00000072609.16ENST00000266880hsa-miR-46351328325041328325107mer-m8132832503132832526155-19.67
CAediting_442554chr5_154685830_+ENSG00000072609.16ENST00000266880hsa-miR-13031328391701328391778mer-1a132839170132839191153-18.39
CAediting_580943chr7_100356700_+ENSG00000072609.16ENST00000266880hsa-miR-6840-3p1328413631328413686mer132841362132841383144-30.1
CAediting_524911chr7_5495852_-ENSG00000072609.16ENST00000266880hsa-miR-589-3p1328414201328414267mer-m8132841419132841442157-29.08
CAediting_524911chr7_5495852_-ENSG00000072609.16ENST00000266880hsa-miR-589-3p1328337931328337997mer-m8132833792132833816158-15.58
CAediting_573001chr7_92204086_-ENSG00000072609.16ENST00000266880hsa-miR-1285-5p1328413811328413877mer-m8132841380132841400148-17.92
CAediting_573001chr7_92204086_-ENSG00000072609.16ENST00000266880hsa-miR-1285-5p1328357811328357877mer-m8132835780132835802144-24
CAediting_1160181chr17_7017644_-ENSG00000072609.16ENST00000443047hsa-miR-195-3p1328411591328411657mer-m8132841158132841182142-14.02
CAediting_580943chr7_100356700_+ENSG00000072609.16ENST00000443047hsa-miR-6840-3p1328413631328413686mer132841362132841383144-30.1
CAediting_524911chr7_5495852_-ENSG00000072609.16ENST00000443047hsa-miR-589-3p1328414201328414267mer-m8132841419132841442157-29.08
CAediting_573001chr7_92204086_-ENSG00000072609.16ENST00000443047hsa-miR-1285-5p1328413811328413877mer-m8132841380132841400148-17.92
CAediting_1160181chr17_7017644_-ENSG00000072609.16ENST00000315585hsa-miR-195-3p1328411591328411657mer-m8132841158132841182142-14.02
CAediting_580943chr7_100356700_+ENSG00000072609.16ENST00000315585hsa-miR-6840-3p1328413631328413686mer132841362132841383144-30.1
CAediting_524911chr7_5495852_-ENSG00000072609.16ENST00000315585hsa-miR-589-3p1328414201328414267mer-m8132841419132841442157-29.08
CAediting_573001chr7_92204086_-ENSG00000072609.16ENST00000315585hsa-miR-1285-5p1328413811328413877mer-m8132841380132841400148-17.92
CAediting_1160181chr17_7017644_-ENSG00000072609.16ENST00000432561hsa-miR-195-3p1328411591328411657mer-m8132841158132841182142-14.02
CAediting_580943chr7_100356700_+ENSG00000072609.16ENST00000432561hsa-miR-6840-3p1328413631328413686mer132841362132841383144-30.1
CAediting_524911chr7_5495852_-ENSG00000072609.16ENST00000432561hsa-miR-589-3p1328414201328414267mer-m8132841419132841442157-29.08
CAediting_573001chr7_92204086_-ENSG00000072609.16ENST00000432561hsa-miR-1285-5p1328413811328413877mer-m8132841380132841400148-17.92
CAediting_1160181chr17_7017644_-ENSG00000072609.16ENST00000544093hsa-miR-195-3p1328411591328411657mer-m8132841158132841182142-14.02
CAediting_580943chr7_100356700_+ENSG00000072609.16ENST00000544093hsa-miR-6840-3p1328413631328413686mer132841362132841383144-30.1
CAediting_524911chr7_5495852_-ENSG00000072609.16ENST00000544093hsa-miR-589-3p1328414201328414267mer-m8132841419132841442157-29.08
CAediting_573001chr7_92204086_-ENSG00000072609.16ENST00000544093hsa-miR-1285-5p1328413811328413877mer-m8132841380132841400148-17.92
CAediting_524911chr7_5495852_-ENSG00000072609.16ENST00000535527hsa-miR-589-3p1328414201328414267mer-m8132841419132841442157-29.08
CAediting_573001chr7_92204086_-ENSG00000072609.16ENST00000535527hsa-miR-1285-5p1328413811328413877mer-m8132841380132841400148-17.92
CAediting_468389chr6_31355314_-ENSG00000072609.16ENST00000266880hsa-miR-6891-5p1328383021328383087mer-m8132838301132838322146-22.18
CAediting_468389chr6_31355314_-ENSG00000072609.16ENST00000266880hsa-miR-6891-5p1328370371328370437mer-1a132837037132837057140-29.91

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_846604chr11_93733708_-ENSG00000072609.16ENST00000266880hsa-miR-1304-3p1328384011328384077mer-m8132838400132838421140-14.24
CAediting_1368054chr19_46709310_-ENSG00000072609.16ENST00000266880hsa-miR-320e1328380771328380837mer-m8132838076132838093145-15.08
CAediting_604450chr7_133034877_-ENSG00000072609.16ENST00000266880hsa-miR-36541328343851328343917mer-m8132834384132834402140-21.03
CAediting_77128chr1_85133844_+ENSG00000072609.16ENST00000266880hsa-miR-4423-3p1328333471328333537mer-m8132833346132833366140-11.07
CAediting_1524209chrX_134546392_-ENSG00000072609.16ENST00000266880hsa-miR-503-5p1328411001328411056mer132841099132841119141-20.51
CAediting_1229413chr17_67471544_+ENSG00000072609.16ENST00000266880hsa-miR-548aa1328387181328387247mer-m8132838717132838748152-14.21
CAediting_1229414chr17_67471546_+ENSG00000072609.16ENST00000266880hsa-miR-548aa1328387181328387247mer-m8132838717132838748152-14.21
CAediting_1229415chr17_67471547_+ENSG00000072609.16ENST00000266880hsa-miR-548aa1328387181328387247mer-m8132838717132838748152-14.21
CAediting_1229413chr17_67471544_+ENSG00000072609.16ENST00000266880hsa-miR-548aa1328373611328373677mer-m8132837360132837382155-12.99
CAediting_1229414chr17_67471546_+ENSG00000072609.16ENST00000266880hsa-miR-548aa1328373611328373677mer-m8132837360132837382155-12.99
CAediting_1229415chr17_67471547_+ENSG00000072609.16ENST00000266880hsa-miR-548aa1328373611328373677mer-m8132837360132837382155-12.99
CAediting_1229413chr17_67471544_+ENSG00000072609.16ENST00000266880hsa-miR-548aa1328344061328344127mer-m8132834405132834429142-6.79
CAediting_1229414chr17_67471546_+ENSG00000072609.16ENST00000266880hsa-miR-548aa1328344061328344127mer-m8132834405132834429142-6.79
CAediting_1229415chr17_67471547_+ENSG00000072609.16ENST00000266880hsa-miR-548aa1328344061328344127mer-m8132834405132834429142-6.79
CAediting_1351755chr19_40282625_-ENSG00000072609.16ENST00000266880hsa-miR-6411328392131328392197mer-1a132839213132839237145-22.56
CAediting_580943chr7_100356700_+ENSG00000072609.16ENST00000266880hsa-miR-6840-3p1328338751328338828mer-1a132833875132833896140-18.35
CAediting_580943chr7_100356700_+ENSG00000072609.16ENST00000266880hsa-miR-6840-3p1328337341328337407mer-m8132833733132833754143-27.34
CAediting_468389chr6_31355314_-ENSG00000072609.16ENST00000266880hsa-miR-6891-5p1328339561328339627mer-m8132833955132833974145-17.53
CAediting_1524209chrX_134546392_-ENSG00000072609.16ENST00000443047hsa-miR-503-5p1328411001328411056mer132841099132841119141-20.51

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CHFR

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for CHFR

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for CHFR

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for CHFR

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for CHFR

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CHFR

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
CHFRC0007131Non-Small Cell Lung Carcinoma1CTD_human;UNIPROT
CHFRC0014170Endometrial Neoplasms1CTD_human
CHFRC0024623Malignant neoplasm of stomach1CTD_human
CHFRC0038356Stomach Neoplasms1CTD_human
CHFRC0476089Endometrial Carcinoma1CTD_human
CHFRC1708349Hereditary Diffuse Gastric Cancer1CTD_human