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Editing gene: SRGN (CAeditome ID:5552)

Gene summary for SRGN

Gene summary

Gene information	Gene symbol	SRGN
	Gene ID	5552
	Gene name	serglycin
	Synonyms	PPG\|PRG\|PRG1
	Cytomap	10q22.1
	Type of gene	protein-coding
	Description	serglycinhematopoetic proteoglycan core peptidehematopoetic proteoglycan core proteinhematopoietic proteoglycan core proteinp.PGplatelet proteoglycan core proteinproteoglycan 1, secretory granuleproteoglycan protein core for mast cell secretory gra
	Modification date	20210524
	UniProtAcc	P10124
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
SRGN	GO:0030502	Serglycin	16870619
SRGN	GO:0140507	Serglycin	11911826
SRGN	GO:0005615	Serglycin	11154222
SRGN	GO:0005794	Serglycin	0000052
SRGN	GO:0005794	Serglycin	15136585

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RNA A-to-I events for SRGN

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000122862.4

RNA A-to-I editing events in Cancer.

CAediting_755692(69089776, +), CAediting_755693(69089781, +), CAediting_755694(69089785, +), CAediting_755695(69089789, +), CAediting_755696(69089924, +), CAediting_755697(69089944, +), CAediting_755698(69089948, +), CAediting_755699(69089952, +), CAediting_755700(69091733, +), CAediting_755701(69091795, +), CAediting_755702(69091804, +), CAediting_755703(69091919, +), CAediting_755704(69091921, +), CAediting_755705(69091924, +), CAediting_755706(69092647, +), CAediting_755707(69092674, +), CAediting_755708(69093720, +), CAediting_755709(69093867, +), CAediting_755710(69093889, +), CAediting_755711(69094618, +), CAediting_755712(69094644, +), CAediting_755713(69094645, +), CAediting_755714(69094682, +), CAediting_755715(69094689, +), CAediting_755716(69094692, +), CAediting_755717(69094693, +), CAediting_755718(69094706, +), CAediting_755719(69094714, +), CAediting_755720(69094718, +), CAediting_755721(69094754, +), CAediting_755722(69094785, +), CAediting_755723(69094788, +), CAediting_755724(69094837, +), CAediting_755725(69094849, +), CAediting_755726(69094864, +), CAediting_755727(69094882, +), CAediting_755728(69095046, +), CAediting_755729(69095061, +), CAediting_755730(69095122, +), CAediting_755731(69095124, +), CAediting_755732(69095131, +), CAediting_755733(69095161, +), CAediting_755734(69095169, +), CAediting_755735(69095193, +), CAediting_755736(69095210, +), CAediting_755737(69095214, +), CAediting_755738(69095899, +), CAediting_755739(69096887, +), CAediting_755740(69096888, +), CAediting_755741(69097291, +), CAediting_755742(69097751, +), CAediting_755743(69098499, +), CAediting_755744(69098521, +), CAediting_755745(69098522, +), CAediting_755746(69098703, +), CAediting_755747(69098704, +), CAediting_755748(69098709, +), CAediting_755749(69098795, +), CAediting_755750(69098799, +), CAediting_755751(69098800, +), CAediting_755752(69098813, +), CAediting_755753(69098817, +), CAediting_755754(69098823, +), CAediting_755755(69098833, +), CAediting_755756(69098849, +), CAediting_755757(69098866, +), CAediting_755758(69098872, +), CAediting_755759(69098903, +), CAediting_755760(69098912, +), CAediting_755761(69098932, +), CAediting_755762(69098936, +), CAediting_755763(69098939, +), CAediting_755764(69098945, +), CAediting_755765(69099330, +), CAediting_755766(69099375, +), CAediting_755767(69099418, +), CAediting_755768(69099426, +), CAediting_755769(69099427, +), CAediting_755770(69099430, +), CAediting_755771(69099439, +), CAediting_755772(69099441, +), CAediting_755773(69099445, +), CAediting_755774(69099514, +), CAediting_755775(69099533, +), CAediting_755776(69099534, +), CAediting_755777(69099539, +), CAediting_755778(69099540, +), CAediting_755779(69099552, +), CAediting_755780(69099557, +), CAediting_755781(69099567, +), CAediting_755782(69099575, +), CAediting_755783(69099842, +), CAediting_755784(69099888, +), CAediting_755785(69099889, +), CAediting_755786(69099892, +), CAediting_755787(69099911, +), CAediting_755788(69099927, +), CAediting_755789(69099940, +), CAediting_755790(69099969, +), CAediting_755791(69099970, +), CAediting_755792(69099976, +), CAediting_755793(69100006, +), CAediting_755794(69100011, +), CAediting_755795(69100020, +), CAediting_755796(69100045, +), CAediting_755797(69100056, +), CAediting_755798(69100074, +), CAediting_755799(69100098, +), CAediting_755800(69100099, +), CAediting_755801(69100108, +), CAediting_755802(69100175, +), CAediting_755803(69100182, +), CAediting_755804(69100203, +), CAediting_755805(69100287, +), CAediting_755806(69100292, +), CAediting_755807(69100293, +), CAediting_755808(69100331, +), CAediting_755809(69100339, +), CAediting_755810(69101082, +), CAediting_755811(69101083, +), CAediting_755812(69101126, +), CAediting_755813(69101201, +), CAediting_755814(69101225, +), CAediting_755815(69101787, +), CAediting_755816(69101791, +), CAediting_755817(69101792, +), CAediting_755818(69101814, +), CAediting_755819(69101818, +), CAediting_755820(69101832, +), CAediting_755821(69101845, +), CAediting_755822(69101869, +), CAediting_755823(69101884, +), CAediting_755824(69101887, +), CAediting_755825(69101890, +), CAediting_755826(69101891, +), CAediting_755827(69101938, +), CAediting_755828(69101941, +), CAediting_755829(69101942, +), CAediting_755830(69101969, +), CAediting_755831(69102004, +), CAediting_755832(69102029, +), CAediting_755833(69102037, +), CAediting_755834(69102990, +), CAediting_755835(69103040, +), CAediting_755836(69103044, +), CAediting_755837(69103052, +), CAediting_755838(69103066, +), CAediting_755839(69103079, +), CAediting_755840(69103085, +), CAediting_755841(69103089, +), CAediting_755842(69103097, +), CAediting_755843(69103105, +), CAediting_755844(69103119, +), CAediting_755845(69103123, +), CAediting_755846(69103137, +), CAediting_755847(69103200, +), CAediting_755848(69103201, +), CAediting_755849(69103215, +), CAediting_755850(69103217, +), CAediting_755851(69103219, +), CAediting_755852(69103289, +), CAediting_755853(69103295, +), CAediting_755854(69103296, +), CAediting_755855(69103381, +), CAediting_755856(69103387, +), CAediting_755857(69103392, +), CAediting_755858(69103393, +), CAediting_755859(69103396, +), CAediting_755860(69103404, +), CAediting_755861(69103432, +), CAediting_755862(69103458, +), CAediting_755863(69103463, +), CAediting_755864(69103488, +), CAediting_755865(69103493, +), CAediting_755866(69103500, +),

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RNA editing positional annotations for SRGN using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_755692	chr10_69089776_+	ncRNA_intronic
CAediting_755693	chr10_69089781_+	ncRNA_intronic
CAediting_755694	chr10_69089785_+	ncRNA_intronic
CAediting_755695	chr10_69089789_+	ncRNA_intronic
CAediting_755696	chr10_69089924_+	ncRNA_intronic
CAediting_755697	chr10_69089944_+	ncRNA_intronic
CAediting_755698	chr10_69089948_+	ncRNA_intronic
CAediting_755699	chr10_69089952_+	ncRNA_intronic
CAediting_755700	chr10_69091733_+	ncRNA_intronic
CAediting_755701	chr10_69091795_+	ncRNA_intronic
CAediting_755702	chr10_69091804_+	ncRNA_intronic
CAediting_755703	chr10_69091919_+	ncRNA_intronic
CAediting_755704	chr10_69091921_+	ncRNA_intronic
CAediting_755705	chr10_69091924_+	ncRNA_intronic
CAediting_755706	chr10_69092647_+	ncRNA_intronic
CAediting_755707	chr10_69092674_+	ncRNA_intronic
CAediting_755708	chr10_69093720_+	ncRNA_intronic
CAediting_755709	chr10_69093867_+	ncRNA_intronic
CAediting_755710	chr10_69093889_+	ncRNA_intronic
CAediting_755711	chr10_69094618_+	ncRNA_intronic
CAediting_755712	chr10_69094644_+	ncRNA_intronic
CAediting_755713	chr10_69094645_+	ncRNA_intronic
CAediting_755714	chr10_69094682_+	ncRNA_intronic
CAediting_755715	chr10_69094689_+	ncRNA_intronic
CAediting_755716	chr10_69094692_+	ncRNA_intronic
CAediting_755717	chr10_69094693_+	ncRNA_intronic
CAediting_755718	chr10_69094706_+	ncRNA_intronic
CAediting_755719	chr10_69094714_+	ncRNA_intronic
CAediting_755720	chr10_69094718_+	ncRNA_intronic
CAediting_755721	chr10_69094754_+	ncRNA_intronic
CAediting_755722	chr10_69094785_+	ncRNA_intronic
CAediting_755723	chr10_69094788_+	ncRNA_intronic
CAediting_755724	chr10_69094837_+	ncRNA_intronic
CAediting_755725	chr10_69094849_+	ncRNA_intronic
CAediting_755726	chr10_69094864_+	ncRNA_intronic
CAediting_755727	chr10_69094882_+	ncRNA_intronic
CAediting_755728	chr10_69095046_+	ncRNA_intronic
CAediting_755729	chr10_69095061_+	ncRNA_intronic
CAediting_755730	chr10_69095122_+	ncRNA_intronic
CAediting_755731	chr10_69095124_+	ncRNA_intronic
CAediting_755732	chr10_69095131_+	ncRNA_intronic
CAediting_755733	chr10_69095161_+	ncRNA_intronic
CAediting_755734	chr10_69095169_+	ncRNA_intronic
CAediting_755735	chr10_69095193_+	ncRNA_intronic
CAediting_755736	chr10_69095210_+	ncRNA_intronic
CAediting_755737	chr10_69095214_+	ncRNA_intronic
CAediting_755738	chr10_69095899_+	ncRNA_intronic
CAediting_755739	chr10_69096887_+	ncRNA_intronic
CAediting_755740	chr10_69096888_+	ncRNA_intronic
CAediting_755741	chr10_69097291_+	ncRNA_intronic
CAediting_755742	chr10_69097751_+	ncRNA_intronic
CAediting_755743	chr10_69098499_+	ncRNA_exonic
CAediting_755744	chr10_69098521_+	ncRNA_exonic
CAediting_755745	chr10_69098522_+	ncRNA_exonic
CAediting_755746	chr10_69098703_+	ncRNA_exonic
CAediting_755747	chr10_69098704_+	ncRNA_exonic
CAediting_755748	chr10_69098709_+	ncRNA_exonic
CAediting_755749	chr10_69098795_+	ncRNA_intronic
CAediting_755750	chr10_69098799_+	ncRNA_intronic
CAediting_755751	chr10_69098800_+	ncRNA_intronic
CAediting_755752	chr10_69098813_+	ncRNA_intronic
CAediting_755753	chr10_69098817_+	ncRNA_intronic
CAediting_755754	chr10_69098823_+	ncRNA_intronic
CAediting_755755	chr10_69098833_+	ncRNA_intronic
CAediting_755756	chr10_69098849_+	ncRNA_intronic
CAediting_755757	chr10_69098866_+	ncRNA_intronic
CAediting_755758	chr10_69098872_+	ncRNA_intronic
CAediting_755759	chr10_69098903_+	ncRNA_intronic
CAediting_755760	chr10_69098912_+	ncRNA_intronic
CAediting_755761	chr10_69098932_+	ncRNA_intronic
CAediting_755762	chr10_69098936_+	ncRNA_intronic
CAediting_755763	chr10_69098939_+	ncRNA_intronic
CAediting_755764	chr10_69098945_+	ncRNA_intronic
CAediting_755765	chr10_69099330_+	ncRNA_intronic
CAediting_755766	chr10_69099375_+	ncRNA_intronic
CAediting_755767	chr10_69099418_+	ncRNA_intronic
CAediting_755768	chr10_69099426_+	ncRNA_intronic
CAediting_755769	chr10_69099427_+	ncRNA_intronic
CAediting_755770	chr10_69099430_+	ncRNA_intronic
CAediting_755771	chr10_69099439_+	ncRNA_intronic
CAediting_755772	chr10_69099441_+	ncRNA_intronic
CAediting_755773	chr10_69099445_+	ncRNA_intronic
CAediting_755774	chr10_69099514_+	ncRNA_intronic
CAediting_755775	chr10_69099533_+	ncRNA_intronic
CAediting_755776	chr10_69099534_+	ncRNA_intronic
CAediting_755777	chr10_69099539_+	ncRNA_intronic
CAediting_755778	chr10_69099540_+	ncRNA_intronic
CAediting_755779	chr10_69099552_+	ncRNA_intronic
CAediting_755780	chr10_69099557_+	ncRNA_intronic
CAediting_755781	chr10_69099567_+	ncRNA_intronic
CAediting_755782	chr10_69099575_+	ncRNA_intronic
CAediting_755783	chr10_69099842_+	ncRNA_intronic
CAediting_755784	chr10_69099888_+	ncRNA_intronic
CAediting_755785	chr10_69099889_+	ncRNA_intronic
CAediting_755786	chr10_69099892_+	ncRNA_intronic
CAediting_755787	chr10_69099911_+	ncRNA_intronic
CAediting_755788	chr10_69099927_+	ncRNA_intronic
CAediting_755789	chr10_69099940_+	ncRNA_intronic
CAediting_755790	chr10_69099969_+	ncRNA_intronic
CAediting_755791	chr10_69099970_+	ncRNA_intronic
CAediting_755792	chr10_69099976_+	ncRNA_intronic
CAediting_755793	chr10_69100006_+	ncRNA_intronic
CAediting_755794	chr10_69100011_+	ncRNA_intronic
CAediting_755795	chr10_69100020_+	ncRNA_intronic
CAediting_755796	chr10_69100045_+	ncRNA_intronic
CAediting_755797	chr10_69100056_+	ncRNA_intronic
CAediting_755798	chr10_69100074_+	ncRNA_intronic
CAediting_755799	chr10_69100098_+	ncRNA_intronic
CAediting_755800	chr10_69100099_+	ncRNA_intronic
CAediting_755801	chr10_69100108_+	ncRNA_intronic
CAediting_755802	chr10_69100175_+	ncRNA_intronic
CAediting_755803	chr10_69100182_+	ncRNA_intronic
CAediting_755804	chr10_69100203_+	ncRNA_intronic
CAediting_755805	chr10_69100287_+	ncRNA_intronic
CAediting_755806	chr10_69100292_+	ncRNA_intronic
CAediting_755807	chr10_69100293_+	ncRNA_intronic
CAediting_755808	chr10_69100331_+	ncRNA_intronic
CAediting_755809	chr10_69100339_+	ncRNA_intronic
CAediting_755810	chr10_69101082_+	ncRNA_intronic
CAediting_755811	chr10_69101083_+	ncRNA_intronic
CAediting_755812	chr10_69101126_+	ncRNA_intronic
CAediting_755813	chr10_69101201_+	ncRNA_intronic
CAediting_755814	chr10_69101225_+	ncRNA_intronic
CAediting_755815	chr10_69101787_+	ncRNA_intronic
CAediting_755816	chr10_69101791_+	ncRNA_intronic
CAediting_755817	chr10_69101792_+	ncRNA_intronic
CAediting_755818	chr10_69101814_+	ncRNA_intronic
CAediting_755819	chr10_69101818_+	ncRNA_intronic
CAediting_755820	chr10_69101832_+	ncRNA_intronic
CAediting_755821	chr10_69101845_+	ncRNA_intronic
CAediting_755822	chr10_69101869_+	ncRNA_intronic
CAediting_755823	chr10_69101884_+	ncRNA_intronic
CAediting_755824	chr10_69101887_+	ncRNA_intronic
CAediting_755825	chr10_69101890_+	ncRNA_intronic
CAediting_755826	chr10_69101891_+	ncRNA_intronic
CAediting_755827	chr10_69101938_+	ncRNA_intronic
CAediting_755828	chr10_69101941_+	ncRNA_intronic
CAediting_755829	chr10_69101942_+	ncRNA_intronic
CAediting_755830	chr10_69101969_+	ncRNA_intronic
CAediting_755831	chr10_69102004_+	ncRNA_intronic
CAediting_755832	chr10_69102029_+	ncRNA_intronic
CAediting_755833	chr10_69102037_+	ncRNA_intronic
CAediting_755834	chr10_69102990_+	ncRNA_intronic
CAediting_755835	chr10_69103040_+	ncRNA_intronic
CAediting_755836	chr10_69103044_+	ncRNA_intronic
CAediting_755837	chr10_69103052_+	ncRNA_intronic
CAediting_755838	chr10_69103066_+	ncRNA_intronic
CAediting_755839	chr10_69103079_+	ncRNA_intronic
CAediting_755840	chr10_69103085_+	ncRNA_intronic
CAediting_755841	chr10_69103089_+	ncRNA_intronic
CAediting_755842	chr10_69103097_+	ncRNA_intronic
CAediting_755843	chr10_69103105_+	ncRNA_intronic
CAediting_755844	chr10_69103119_+	ncRNA_intronic
CAediting_755845	chr10_69103123_+	ncRNA_intronic
CAediting_755846	chr10_69103137_+	ncRNA_intronic
CAediting_755847	chr10_69103200_+	ncRNA_intronic
CAediting_755848	chr10_69103201_+	ncRNA_intronic
CAediting_755849	chr10_69103215_+	ncRNA_intronic
CAediting_755850	chr10_69103217_+	ncRNA_intronic
CAediting_755851	chr10_69103219_+	ncRNA_intronic
CAediting_755852	chr10_69103289_+	ncRNA_intronic
CAediting_755853	chr10_69103295_+	ncRNA_intronic
CAediting_755854	chr10_69103296_+	ncRNA_intronic
CAediting_755855	chr10_69103381_+	ncRNA_intronic
CAediting_755856	chr10_69103387_+	ncRNA_intronic
CAediting_755857	chr10_69103392_+	ncRNA_intronic
CAediting_755858	chr10_69103393_+	ncRNA_intronic
CAediting_755859	chr10_69103396_+	ncRNA_intronic
CAediting_755860	chr10_69103404_+	ncRNA_intronic
CAediting_755861	chr10_69103432_+	ncRNA_intronic
CAediting_755862	chr10_69103458_+	ncRNA_intronic
CAediting_755863	chr10_69103463_+	ncRNA_intronic
CAediting_755864	chr10_69103488_+	ncRNA_intronic
CAediting_755865	chr10_69103493_+	ncRNA_intronic
CAediting_755866	chr10_69103500_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_755692	chr10_69089776_+	SINE	Alu	AluSx3
CAediting_755693	chr10_69089781_+	SINE	Alu	AluSx3
CAediting_755694	chr10_69089785_+	SINE	Alu	AluSx3
CAediting_755695	chr10_69089789_+	SINE	Alu	AluSx3
CAediting_755696	chr10_69089924_+	SINE	Alu	AluSx3
CAediting_755697	chr10_69089944_+	Simple_repeat	Simple_repeat	(AGAA)n
CAediting_755698	chr10_69089948_+	Simple_repeat	Simple_repeat	(AGAA)n
CAediting_755699	chr10_69089952_+	Simple_repeat	Simple_repeat	(AGAA)n
CAediting_755700	chr10_69091733_+	SINE	Alu	AluSz
CAediting_755701	chr10_69091795_+	SINE	Alu	AluSz
CAediting_755702	chr10_69091804_+	SINE	Alu	AluSz
CAediting_755703	chr10_69091919_+	Low_complexity	Low_complexity	GA-rich
CAediting_755704	chr10_69091921_+	Low_complexity	Low_complexity	GA-rich
CAediting_755705	chr10_69091924_+	Low_complexity	Low_complexity	GA-rich
CAediting_755706	chr10_69092647_+	SINE	Alu	AluSz
CAediting_755707	chr10_69092674_+	SINE	Alu	AluSz
CAediting_755708	chr10_69093720_+	SINE	Alu	AluSc8
CAediting_755709	chr10_69093867_+	SINE	Alu	AluSc8
CAediting_755710	chr10_69093889_+	SINE	Alu	AluSc8
CAediting_755711	chr10_69094618_+	SINE	Alu	AluJb
CAediting_755712	chr10_69094644_+	SINE	Alu	AluJb
CAediting_755713	chr10_69094645_+	SINE	Alu	AluJb
CAediting_755714	chr10_69094682_+	SINE	Alu	AluJb
CAediting_755715	chr10_69094689_+	SINE	Alu	AluJb
CAediting_755716	chr10_69094692_+	SINE	Alu	AluJb
CAediting_755717	chr10_69094693_+	SINE	Alu	AluJb
CAediting_755718	chr10_69094706_+	SINE	Alu	AluJb
CAediting_755719	chr10_69094714_+	SINE	Alu	AluJb
CAediting_755720	chr10_69094718_+	SINE	Alu	AluJb
CAediting_755721	chr10_69094754_+	SINE	Alu	AluJb
CAediting_755722	chr10_69094785_+	SINE	Alu	AluJb
CAediting_755723	chr10_69094788_+	SINE	Alu	AluJb
CAediting_755724	chr10_69094837_+	SINE	Alu	AluJb
CAediting_755725	chr10_69094849_+	SINE	Alu	AluJb
CAediting_755726	chr10_69094864_+	SINE	Alu	AluJb
CAediting_755727	chr10_69094882_+	SINE	Alu	AluJb
CAediting_755728	chr10_69095046_+	SINE	Alu	AluSx1
CAediting_755729	chr10_69095061_+	SINE	Alu	AluSx1
CAediting_755730	chr10_69095122_+	SINE	Alu	AluSx1
CAediting_755731	chr10_69095124_+	SINE	Alu	AluSx1
CAediting_755732	chr10_69095131_+	SINE	Alu	AluSx1
CAediting_755733	chr10_69095161_+	SINE	Alu	AluSx1
CAediting_755734	chr10_69095169_+	SINE	Alu	AluSx1
CAediting_755735	chr10_69095193_+	SINE	Alu	AluSx1
CAediting_755736	chr10_69095210_+	SINE	Alu	AluSx1
CAediting_755737	chr10_69095214_+	SINE	Alu	AluSx1
CAediting_755738	chr10_69095899_+	SINE	Alu	AluSx1
CAediting_755739	chr10_69096887_+	SINE	Alu	AluJo
CAediting_755740	chr10_69096888_+	SINE	Alu	AluJo
CAediting_755741	chr10_69097291_+	SINE	Alu	AluSq2
CAediting_755742	chr10_69097751_+	SINE	Alu	AluSq2
CAediting_755743	chr10_69098499_+	SINE	Alu	AluJo
CAediting_755744	chr10_69098521_+	SINE	Alu	AluJo
CAediting_755745	chr10_69098522_+	SINE	Alu	AluJo
CAediting_755746	chr10_69098703_+	SINE	Alu	AluJo
CAediting_755747	chr10_69098704_+	SINE	Alu	AluJo
CAediting_755748	chr10_69098709_+	SINE	Alu	AluJo
CAediting_755749	chr10_69098795_+	SINE	Alu	AluJo
CAediting_755750	chr10_69098799_+	SINE	Alu	AluJo
CAediting_755751	chr10_69098800_+	SINE	Alu	AluJo
CAediting_755752	chr10_69098813_+	SINE	Alu	AluJo
CAediting_755753	chr10_69098817_+	SINE	Alu	AluJo
CAediting_755754	chr10_69098823_+	SINE	Alu	AluJo
CAediting_755755	chr10_69098833_+	SINE	Alu	AluJo
CAediting_755756	chr10_69098849_+	SINE	Alu	AluJo
CAediting_755757	chr10_69098866_+	SINE	Alu	AluJo
CAediting_755758	chr10_69098872_+	SINE	Alu	AluJo
CAediting_755759	chr10_69098903_+	SINE	Alu	AluJo
CAediting_755760	chr10_69098912_+	SINE	Alu	AluJo
CAediting_755761	chr10_69098932_+	SINE	Alu	AluJo
CAediting_755762	chr10_69098936_+	SINE	Alu	AluJo
CAediting_755763	chr10_69098939_+	SINE	Alu	AluJo
CAediting_755764	chr10_69098945_+	SINE	Alu	AluJo
CAediting_755765	chr10_69099330_+	SINE	Alu	AluJo
CAediting_755766	chr10_69099375_+	SINE	Alu	AluJo
CAediting_755767	chr10_69099418_+	SINE	Alu	AluJo
CAediting_755768	chr10_69099426_+	SINE	Alu	AluJo
CAediting_755769	chr10_69099427_+	SINE	Alu	AluJo
CAediting_755770	chr10_69099430_+	SINE	Alu	AluJo
CAediting_755771	chr10_69099439_+	SINE	Alu	AluJo
CAediting_755772	chr10_69099441_+	SINE	Alu	AluJo
CAediting_755773	chr10_69099445_+	SINE	Alu	AluJo
CAediting_755774	chr10_69099514_+	SINE	Alu	AluJo
CAediting_755775	chr10_69099533_+	SINE	Alu	AluJo
CAediting_755776	chr10_69099534_+	SINE	Alu	AluJo
CAediting_755777	chr10_69099539_+	SINE	Alu	AluJo
CAediting_755778	chr10_69099540_+	SINE	Alu	AluJo
CAediting_755779	chr10_69099552_+	SINE	Alu	AluJo
CAediting_755780	chr10_69099557_+	SINE	Alu	AluJo
CAediting_755781	chr10_69099567_+	SINE	Alu	AluJo
CAediting_755782	chr10_69099575_+	SINE	Alu	AluJo
CAediting_755783	chr10_69099842_+	SINE	Alu	AluJb
CAediting_755784	chr10_69099888_+	SINE	Alu	AluJb
CAediting_755785	chr10_69099889_+	SINE	Alu	AluJb
CAediting_755786	chr10_69099892_+	SINE	Alu	AluJb
CAediting_755787	chr10_69099911_+	SINE	Alu	AluJb
CAediting_755788	chr10_69099927_+	SINE	Alu	AluJb
CAediting_755789	chr10_69099940_+	SINE	Alu	AluJb
CAediting_755790	chr10_69099969_+	SINE	Alu	AluSz
CAediting_755791	chr10_69099970_+	SINE	Alu	AluSz
CAediting_755792	chr10_69099976_+	SINE	Alu	AluSz
CAediting_755793	chr10_69100006_+	SINE	Alu	AluSz
CAediting_755794	chr10_69100011_+	SINE	Alu	AluSz
CAediting_755795	chr10_69100020_+	SINE	Alu	AluSz
CAediting_755796	chr10_69100045_+	SINE	Alu	AluSz
CAediting_755797	chr10_69100056_+	SINE	Alu	AluSz
CAediting_755798	chr10_69100074_+	SINE	Alu	AluSz
CAediting_755799	chr10_69100098_+	SINE	Alu	AluSz
CAediting_755800	chr10_69100099_+	SINE	Alu	AluSz
CAediting_755801	chr10_69100108_+	SINE	Alu	AluSz
CAediting_755802	chr10_69100175_+	SINE	Alu	AluSz
CAediting_755803	chr10_69100182_+	SINE	Alu	AluSz
CAediting_755804	chr10_69100203_+	SINE	Alu	AluSz
CAediting_755805	chr10_69100287_+	SINE	Alu	AluJb
CAediting_755806	chr10_69100292_+	SINE	Alu	AluJb
CAediting_755807	chr10_69100293_+	SINE	Alu	AluJb
CAediting_755808	chr10_69100331_+	SINE	Alu	AluJb
CAediting_755809	chr10_69100339_+	SINE	Alu	AluJb
CAediting_755810	chr10_69101082_+	SINE	Alu	AluSz6
CAediting_755811	chr10_69101083_+	SINE	Alu	AluSz6
CAediting_755812	chr10_69101126_+	SINE	Alu	AluSz6
CAediting_755813	chr10_69101201_+	SINE	Alu	AluSz6
CAediting_755814	chr10_69101225_+	SINE	Alu	AluSz6
CAediting_755815	chr10_69101787_+	SINE	Alu	AluJb
CAediting_755816	chr10_69101791_+	SINE	Alu	AluJb
CAediting_755817	chr10_69101792_+	SINE	Alu	AluJb
CAediting_755818	chr10_69101814_+	SINE	Alu	AluJb
CAediting_755819	chr10_69101818_+	SINE	Alu	AluJb
CAediting_755820	chr10_69101832_+	SINE	Alu	AluJb
CAediting_755821	chr10_69101845_+	SINE	Alu	AluJb
CAediting_755822	chr10_69101869_+	SINE	Alu	AluJb
CAediting_755823	chr10_69101884_+	SINE	Alu	AluJb
CAediting_755824	chr10_69101887_+	SINE	Alu	AluJb
CAediting_755825	chr10_69101890_+	SINE	Alu	AluJb
CAediting_755826	chr10_69101891_+	SINE	Alu	AluJb
CAediting_755827	chr10_69101938_+	SINE	Alu	AluJb
CAediting_755828	chr10_69101941_+	SINE	Alu	AluJb
CAediting_755829	chr10_69101942_+	SINE	Alu	AluJb
CAediting_755830	chr10_69101969_+	SINE	Alu	AluJb
CAediting_755831	chr10_69102004_+	SINE	Alu	AluJb
CAediting_755832	chr10_69102029_+	SINE	Alu	AluJb
CAediting_755833	chr10_69102037_+	SINE	Alu	AluJb
CAediting_755834	chr10_69102990_+	SINE	Alu	AluSq
CAediting_755835	chr10_69103040_+	SINE	Alu	AluSq
CAediting_755836	chr10_69103044_+	SINE	Alu	AluSq
CAediting_755837	chr10_69103052_+	SINE	Alu	AluSq
CAediting_755838	chr10_69103066_+	SINE	Alu	AluSq
CAediting_755839	chr10_69103079_+	SINE	Alu	AluSq
CAediting_755840	chr10_69103085_+	SINE	Alu	AluSq
CAediting_755841	chr10_69103089_+	SINE	Alu	AluSq
CAediting_755842	chr10_69103097_+	SINE	Alu	AluSq
CAediting_755843	chr10_69103105_+	SINE	Alu	AluSq
CAediting_755844	chr10_69103119_+	SINE	Alu	AluSq
CAediting_755845	chr10_69103123_+	SINE	Alu	AluSq
CAediting_755846	chr10_69103137_+	SINE	Alu	AluSq
CAediting_755847	chr10_69103200_+	SINE	Alu	AluSq
CAediting_755848	chr10_69103201_+	SINE	Alu	AluSq
CAediting_755849	chr10_69103215_+	SINE	Alu	AluSq
CAediting_755850	chr10_69103217_+	SINE	Alu	AluSq
CAediting_755851	chr10_69103219_+	SINE	Alu	AluSq
CAediting_755852	chr10_69103289_+	SINE	Alu	AluSx4
CAediting_755853	chr10_69103295_+	SINE	Alu	AluSx4
CAediting_755854	chr10_69103296_+	SINE	Alu	AluSx4
CAediting_755855	chr10_69103381_+	SINE	Alu	AluSx4
CAediting_755856	chr10_69103387_+	SINE	Alu	AluSx4
CAediting_755857	chr10_69103392_+	SINE	Alu	AluSx4
CAediting_755858	chr10_69103393_+	SINE	Alu	AluSx4
CAediting_755859	chr10_69103396_+	SINE	Alu	AluSx4
CAediting_755860	chr10_69103404_+	SINE	Alu	AluSx4
CAediting_755861	chr10_69103432_+	SINE	Alu	AluSx4
CAediting_755862	chr10_69103458_+	SINE	Alu	AluSx4
CAediting_755863	chr10_69103463_+	SINE	Alu	AluSx4
CAediting_755864	chr10_69103488_+	SINE	Alu	AluSx4
CAediting_755865	chr10_69103493_+	SINE	Alu	AluSx4
CAediting_755866	chr10_69103500_+	SINE	Alu	AluSx4

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RNA A-to-I editing events in the alternative splicing sites for SRGN

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000122862.4.SRGN.

Correlation between RNA A-to-I editing and PSI for ENSG00000122862.4.SRGN.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SRGN

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for SRGN

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SRGN

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SRGN

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for SRGN

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LAML	CAediting_755766	chr10_69099375_+	.	.	.	.	0.0416935328823593	0.229719107094997

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Relation with cancer stages for SRGN

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
KIRC	pathologic_stage	CAediting_755767	chr10_69099418_+	0.015100953823178	0.345298533158115

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Relation with survival for SRGN

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for SRGN

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SRGN

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
SRGN	C0023893	Liver Cirrhosis, Experimental	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene