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Editing gene: PRELP (CAeditome ID:5549)

Gene summary for PRELP

Gene summary

Gene information	Gene symbol	PRELP
	Gene ID	5549
	Gene name	proline and arginine rich end leucine rich repeat protein
	Synonyms	MST161\|MSTP161\|SLRR2A
	Cytomap	1q32.1
	Type of gene	protein-coding
	Description	prolargin55 kDa leucine-rich repeat protein of articular cartilageprolargin proteoglycanproline-arginine-rich end leucine-rich repeat protein
	Modification date	20210518
	UniProtAcc	P51888
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for PRELP

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000188783.5

RNA A-to-I editing events in Cancer.

CAediting_132311(203488260, +), CAediting_132312(203488261, +), CAediting_132313(203488319, +), CAediting_132314(203488378, +), CAediting_132315(203488382, +), CAediting_132316(203488384, +), CAediting_132317(203488398, +), CAediting_132318(203488400, +), CAediting_132319(203488401, +), CAediting_132320(203488416, +), CAediting_132321(203488448, +), CAediting_132322(203488461, +), CAediting_132323(203488465, +), CAediting_132324(203488520, +), CAediting_132325(203488525, +), CAediting_132326(203488527, +), CAediting_132327(203489693, +), CAediting_132328(203489701, +), CAediting_132329(203489702, +), CAediting_132330(203489707, +), CAediting_132331(203489710, +), CAediting_132332(203489718, +), CAediting_132333(203489723, +), CAediting_132334(203489724, +), CAediting_132335(203489732, +), CAediting_132336(203489737, +), CAediting_132337(203489742, +), CAediting_132338(203489747, +), CAediting_132339(203489750, +), CAediting_132340(203489755, +), CAediting_132341(203489756, +), CAediting_132342(203489758, +), CAediting_132343(203489761, +), CAediting_132344(203489773, +), CAediting_132345(203489775, +), CAediting_132346(203489801, +), CAediting_132347(203489828, +), CAediting_132348(203489836, +), CAediting_132349(203489846, +), CAediting_132350(203489853, +), CAediting_132351(203489859, +), CAediting_132352(203489889, +), CAediting_132353(203489892, +), CAediting_132354(203489898, +), CAediting_132355(203489932, +), CAediting_132356(203489941, +), CAediting_132357(203489983, +), CAediting_132358(203489985, +), CAediting_132359(203490135, +), CAediting_132360(203490148, +), CAediting_132361(203490150, +), CAediting_132362(203490154, +), CAediting_132363(203490162, +), CAediting_132364(203490165, +), CAediting_132365(203490174, +), CAediting_132366(203490186, +), CAediting_132367(203490199, +), CAediting_132368(203490204, +), CAediting_132369(203490226, +), CAediting_132370(203490237, +), CAediting_132371(203490240, +), CAediting_132372(203490249, +), CAediting_132373(203490262, +), CAediting_132374(203490274, +),

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RNA editing positional annotations for PRELP using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_132311	chr1_203488260_+	UTR3
CAediting_132312	chr1_203488261_+	UTR3
CAediting_132313	chr1_203488319_+	UTR3
CAediting_132314	chr1_203488378_+	UTR3
CAediting_132315	chr1_203488382_+	UTR3
CAediting_132316	chr1_203488384_+	UTR3
CAediting_132317	chr1_203488398_+	UTR3
CAediting_132318	chr1_203488400_+	UTR3
CAediting_132319	chr1_203488401_+	UTR3
CAediting_132320	chr1_203488416_+	UTR3
CAediting_132321	chr1_203488448_+	UTR3
CAediting_132322	chr1_203488461_+	UTR3
CAediting_132323	chr1_203488465_+	UTR3
CAediting_132324	chr1_203488520_+	UTR3
CAediting_132325	chr1_203488525_+	UTR3
CAediting_132326	chr1_203488527_+	UTR3
CAediting_132327	chr1_203489693_+	UTR3
CAediting_132328	chr1_203489701_+	UTR3
CAediting_132329	chr1_203489702_+	UTR3
CAediting_132330	chr1_203489707_+	UTR3
CAediting_132331	chr1_203489710_+	UTR3
CAediting_132332	chr1_203489718_+	UTR3
CAediting_132333	chr1_203489723_+	UTR3
CAediting_132334	chr1_203489724_+	UTR3
CAediting_132335	chr1_203489732_+	UTR3
CAediting_132336	chr1_203489737_+	UTR3
CAediting_132337	chr1_203489742_+	UTR3
CAediting_132338	chr1_203489747_+	UTR3
CAediting_132339	chr1_203489750_+	UTR3
CAediting_132340	chr1_203489755_+	UTR3
CAediting_132341	chr1_203489756_+	UTR3
CAediting_132342	chr1_203489758_+	UTR3
CAediting_132343	chr1_203489761_+	UTR3
CAediting_132344	chr1_203489773_+	UTR3
CAediting_132345	chr1_203489775_+	UTR3
CAediting_132346	chr1_203489801_+	UTR3
CAediting_132347	chr1_203489828_+	UTR3
CAediting_132348	chr1_203489836_+	UTR3
CAediting_132349	chr1_203489846_+	UTR3
CAediting_132350	chr1_203489853_+	UTR3
CAediting_132351	chr1_203489859_+	UTR3
CAediting_132352	chr1_203489889_+	UTR3
CAediting_132353	chr1_203489892_+	UTR3
CAediting_132354	chr1_203489898_+	UTR3
CAediting_132355	chr1_203489932_+	UTR3
CAediting_132356	chr1_203489941_+	UTR3
CAediting_132357	chr1_203489983_+	UTR3
CAediting_132358	chr1_203489985_+	UTR3
CAediting_132359	chr1_203490135_+	UTR3
CAediting_132360	chr1_203490148_+	UTR3
CAediting_132361	chr1_203490150_+	UTR3
CAediting_132362	chr1_203490154_+	UTR3
CAediting_132363	chr1_203490162_+	UTR3
CAediting_132364	chr1_203490165_+	UTR3
CAediting_132365	chr1_203490174_+	UTR3
CAediting_132366	chr1_203490186_+	UTR3
CAediting_132367	chr1_203490199_+	UTR3
CAediting_132368	chr1_203490204_+	UTR3
CAediting_132369	chr1_203490226_+	UTR3
CAediting_132370	chr1_203490237_+	UTR3
CAediting_132371	chr1_203490240_+	UTR3
CAediting_132372	chr1_203490249_+	UTR3
CAediting_132373	chr1_203490262_+	UTR3
CAediting_132374	chr1_203490274_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_132311	chr1_203488260_+	SINE	Alu	AluSx
CAediting_132312	chr1_203488261_+	SINE	Alu	AluSx
CAediting_132313	chr1_203488319_+	SINE	Alu	AluSx
CAediting_132314	chr1_203488378_+	SINE	Alu	AluSx
CAediting_132315	chr1_203488382_+	SINE	Alu	AluSx
CAediting_132316	chr1_203488384_+	SINE	Alu	AluSx
CAediting_132317	chr1_203488398_+	SINE	Alu	AluSx
CAediting_132318	chr1_203488400_+	SINE	Alu	AluSx
CAediting_132319	chr1_203488401_+	SINE	Alu	AluSx
CAediting_132320	chr1_203488416_+	SINE	Alu	AluSx
CAediting_132321	chr1_203488448_+	SINE	Alu	AluSx
CAediting_132322	chr1_203488461_+	SINE	Alu	AluSx
CAediting_132323	chr1_203488465_+	SINE	Alu	AluSx
CAediting_132324	chr1_203488520_+	SINE	Alu	AluSx
CAediting_132325	chr1_203488525_+	SINE	Alu	AluSx
CAediting_132326	chr1_203488527_+	SINE	Alu	AluSx
CAediting_132327	chr1_203489693_+	SINE	Alu	AluSx
CAediting_132328	chr1_203489701_+	SINE	Alu	AluSx
CAediting_132329	chr1_203489702_+	SINE	Alu	AluSx
CAediting_132330	chr1_203489707_+	SINE	Alu	AluSx
CAediting_132331	chr1_203489710_+	SINE	Alu	AluSx
CAediting_132332	chr1_203489718_+	SINE	Alu	AluSx
CAediting_132333	chr1_203489723_+	SINE	Alu	AluSx
CAediting_132334	chr1_203489724_+	SINE	Alu	AluSx
CAediting_132335	chr1_203489732_+	SINE	Alu	AluSx
CAediting_132336	chr1_203489737_+	SINE	Alu	AluSx
CAediting_132337	chr1_203489742_+	SINE	Alu	AluSx
CAediting_132338	chr1_203489747_+	SINE	Alu	AluSx
CAediting_132339	chr1_203489750_+	SINE	Alu	AluSx
CAediting_132340	chr1_203489755_+	SINE	Alu	AluSx
CAediting_132341	chr1_203489756_+	SINE	Alu	AluSx
CAediting_132342	chr1_203489758_+	SINE	Alu	AluSx
CAediting_132343	chr1_203489761_+	SINE	Alu	AluSx
CAediting_132344	chr1_203489773_+	SINE	Alu	AluSx
CAediting_132345	chr1_203489775_+	SINE	Alu	AluSx
CAediting_132346	chr1_203489801_+	SINE	Alu	AluSx
CAediting_132347	chr1_203489828_+	SINE	Alu	AluSx
CAediting_132348	chr1_203489836_+	SINE	Alu	AluSx
CAediting_132349	chr1_203489846_+	SINE	Alu	AluSx
CAediting_132350	chr1_203489853_+	SINE	Alu	AluSx
CAediting_132351	chr1_203489859_+	SINE	Alu	AluSx
CAediting_132352	chr1_203489889_+	SINE	Alu	AluSx
CAediting_132353	chr1_203489892_+	SINE	Alu	AluSx
CAediting_132354	chr1_203489898_+	SINE	Alu	AluSx
CAediting_132355	chr1_203489932_+	SINE	Alu	AluSx
CAediting_132356	chr1_203489941_+	SINE	Alu	AluSx
CAediting_132357	chr1_203489983_+	SINE	Alu	AluSx
CAediting_132358	chr1_203489985_+	SINE	Alu	AluSx
CAediting_132359	chr1_203490135_+	SINE	Alu	AluJr
CAediting_132360	chr1_203490148_+	SINE	Alu	AluJr
CAediting_132361	chr1_203490150_+	SINE	Alu	AluJr
CAediting_132362	chr1_203490154_+	SINE	Alu	AluJr
CAediting_132363	chr1_203490162_+	SINE	Alu	AluJr
CAediting_132364	chr1_203490165_+	SINE	Alu	AluJr
CAediting_132365	chr1_203490174_+	SINE	Alu	AluJr
CAediting_132366	chr1_203490186_+	SINE	Alu	AluJr
CAediting_132367	chr1_203490199_+	SINE	Alu	AluJr
CAediting_132368	chr1_203490204_+	SINE	Alu	AluJr
CAediting_132369	chr1_203490226_+	SINE	Alu	AluJr
CAediting_132370	chr1_203490237_+	SINE	Alu	AluJr
CAediting_132371	chr1_203490240_+	SINE	Alu	AluJr
CAediting_132372	chr1_203490249_+	SINE	Alu	AluJr
CAediting_132373	chr1_203490262_+	SINE	Alu	AluJr

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RNA A-to-I editing events in the alternative splicing sites for PRELP

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000188783.5.PRELP.

Correlation between RNA A-to-I editing and PSI for ENSG00000188783.5.PRELP.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PRELP

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PRELP

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for PRELP

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_132329	chr1_203489702_+	ENSG00000188783.5	ENST00000343110	hsa-miR-8052	203489700	203489706	7mer-1a	203489688	203489706	140.00	-19.63
CAediting_132333	chr1_203489723_+	ENSG00000188783.5	ENST00000343110	hsa-miR-10392-5p	203489721	203489727	7mer-m8	203489706	203489728	153.00	-19.65
CAediting_132334	chr1_203489724_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3176	203489717	203489724	8mer-1a	203489706	203489724	140.00	-17.59
CAediting_132334	chr1_203489724_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3922-3p	203489717	203489724	8mer-1a	203489704	203489724	144.00	-19.86
CAediting_132334	chr1_203489724_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6764-3p	203489720	203489725	6mer	203489706	203489726	141.00	-19.97
CAediting_132334	chr1_203489724_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6824-3p	203489720	203489725	6mer	203489707	203489726	141.00	-23.75
CAediting_132341	chr1_203489756_+	ENSG00000188783.5	ENST00000343110	hsa-miR-12113	203489749	203489755	7mer-m8	203489736	203489756	147.00	-19.86
CAediting_132341	chr1_203489756_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4539	203489749	203489755	7mer-m8	203489737	203489756	151.00	-20.00
CAediting_132368	chr1_203490204_+	ENSG00000188783.5	ENST00000343110	hsa-miR-1255b-2-3p	203490198	203490204	7mer-m8	203490184	203490205	140.00	-9.30
CAediting_132368	chr1_203490204_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4751	203490202	203490208	7mer-m8	203490186	203490209	158.00	-22.80
CAediting_132311	chr1_203488260_+	ENSG00000188783.5	ENST00000343110	hsa-miR-513a-5p	203488254	203488260	7mer-m8	203488244	203488261	144.00	-16.68
CAediting_132311	chr1_203488260_+	ENSG00000188783.5	ENST00000343110	hsa-miR-513a-5p	203488254	203488260	7mer-m8	203488244	203488261	144.00	-16.68
CAediting_132311	chr1_203488260_+	ENSG00000188783.5	ENST00000343110	hsa-miR-638	203488259	203488265	7mer-1a	203488241	203488265	159.00	-35.56
CAediting_132312	chr1_203488261_+	ENSG00000188783.5	ENST00000343110	hsa-miR-8052	203488259	203488265	7mer-1a	203488247	203488265	140.00	-24.15
CAediting_132313	chr1_203488319_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6843-3p	203488316	203488322	7mer-m8	203488304	203488323	152.00	-20.55
CAediting_132313	chr1_203488319_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6848-3p	203488316	203488322	7mer-m8	203488306	203488323	142.00	-17.69
CAediting_132316	chr1_203488384_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6872-3p	203488378	203488384	7mer-m8	203488365	203488385	145.00	-14.21
CAediting_132317	chr1_203488398_+	ENSG00000188783.5	ENST00000343110	hsa-miR-10399-5p	203488395	203488401	7mer-m8	203488381	203488402	144.00	-10.67
CAediting_132317	chr1_203488398_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6504-3p	203488395	203488401	7mer-m8	203488381	203488402	152.00	-14.34
CAediting_132317	chr1_203488398_+	ENSG00000188783.5	ENST00000343110	hsa-miR-7151-3p	203488393	203488400	8mer-1a	203488380	203488400	140.00	-14.52
CAediting_132318	chr1_203488400_+	ENSG00000188783.5	ENST00000343110	hsa-miR-638	203488399	203488405	7mer-1a	203488381	203488405	153.00	-32.04
CAediting_132319	chr1_203488401_+	ENSG00000188783.5	ENST00000343110	hsa-miR-625-3p	203488395	203488401	7mer-m8	203488381	203488402	144.00	-12.75
CAediting_132319	chr1_203488401_+	ENSG00000188783.5	ENST00000343110	hsa-miR-8052	203488399	203488405	7mer-1a	203488385	203488405	145.00	-24.05
CAediting_132321	chr1_203488448_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4313	203488445	203488450	6mer	203488432	203488451	142.00	-21.73
CAediting_132321	chr1_203488448_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6840-5p	203488441	203488447	7mer-m8	203488425	203488448	146.00	-23.26
CAediting_132322	chr1_203488461_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6511a-3p	203488460	203488465	6mer	203488445	203488466	140.00	-30.24
CAediting_132322	chr1_203488461_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6511a-3p	203488460	203488465	6mer	203488445	203488466	140.00	-30.24
CAediting_132322	chr1_203488461_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6511a-3p	203488460	203488465	6mer	203488445	203488466	140.00	-30.24
CAediting_132322	chr1_203488461_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6511a-3p	203488460	203488465	6mer	203488445	203488466	140.00	-30.24
CAediting_132322	chr1_203488461_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6511b-3p	203488460	203488465	6mer	203488444	203488466	144.00	-33.12
CAediting_132322	chr1_203488461_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6511b-3p	203488460	203488465	6mer	203488444	203488466	144.00	-33.12
CAediting_132322	chr1_203488461_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6784-3p	203488460	203488465	6mer	203488444	203488466	147.00	-32.33
CAediting_132323	chr1_203488465_+	ENSG00000188783.5	ENST00000343110	hsa-miR-324-3p	203488458	203488464	7mer-m8	203488443	203488465	145.00	-23.67
CAediting_132323	chr1_203488465_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4286	203488460	203488466	7mer-m8	203488451	203488467	142.00	-16.95
CAediting_132323	chr1_203488465_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4758-3p	203488461	203488467	7mer-m8	203488448	203488468	160.00	-29.10
CAediting_132327	chr1_203489693_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4634	203489690	203489696	7mer-m8	203489678	203489697	151.00	-24.10
CAediting_132328	chr1_203489701_+	ENSG00000188783.5	ENST00000343110	hsa-miR-513a-5p	203489695	203489701	7mer-m8	203489684	203489702	144.00	-16.12
CAediting_132328	chr1_203489701_+	ENSG00000188783.5	ENST00000343110	hsa-miR-513a-5p	203489695	203489701	7mer-m8	203489684	203489702	144.00	-16.12
CAediting_132328	chr1_203489701_+	ENSG00000188783.5	ENST00000343110	hsa-miR-638	203489700	203489706	7mer-1a	203489682	203489706	152.00	-33.36
CAediting_132330	chr1_203489707_+	ENSG00000188783.5	ENST00000343110	hsa-miR-371a-3p	203489705	203489711	7mer-m8	203489690	203489712	145.00	-16.11
CAediting_132337	chr1_203489742_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4726-3p	203489736	203489742	7mer-m8	203489724	203489743	153.00	-29.22
CAediting_132339	chr1_203489750_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4732-3p	203489743	203489749	7mer-m8	203489730	203489750	155.00	-23.59
CAediting_132344	chr1_203489773_+	ENSG00000188783.5	ENST00000343110	hsa-miR-1306-3p	203489766	203489772	7mer-m8	203489756	203489773	152.00	-23.71
CAediting_132345	chr1_203489775_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4716-5p	203489769	203489775	7mer-m8	203489755	203489776	140.00	-11.30
CAediting_132346	chr1_203489801_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3680-3p	203489798	203489805	8mer-1a	203489783	203489805	140.00	-14.98
CAediting_132346	chr1_203489801_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3680-3p	203489798	203489805	8mer-1a	203489783	203489805	140.00	-14.98
CAediting_132347	chr1_203489828_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3622a-5p	203489826	203489832	7mer-m8	203489812	203489833	140.00	-20.66
CAediting_132348	chr1_203489836_+	ENSG00000188783.5	ENST00000343110	hsa-miR-140-3p	203489831	203489837	7mer-m8	203489818	203489838	163.00	-23.02
CAediting_132350	chr1_203489853_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3943	203489850	203489856	7mer-m8	203489837	203489857	146.00	-22.28
CAediting_132351	chr1_203489859_+	ENSG00000188783.5	ENST00000343110	hsa-miR-1913	203489857	203489863	7mer-m8	203489843	203489864	147.00	-22.10
CAediting_132351	chr1_203489859_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6849-3p	203489852	203489858	7mer-m8	203489838	203489859	140.00	-18.03
CAediting_132352	chr1_203489889_+	ENSG00000188783.5	ENST00000343110	hsa-miR-1281	203489882	203489888	7mer-m8	203489873	203489889	140.00	-16.17
CAediting_132354	chr1_203489898_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6511a-3p	203489897	203489902	6mer	203489882	203489903	148.00	-26.54
CAediting_132354	chr1_203489898_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6511a-3p	203489897	203489902	6mer	203489882	203489903	148.00	-26.54
CAediting_132354	chr1_203489898_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6511a-3p	203489897	203489902	6mer	203489882	203489903	148.00	-26.54
CAediting_132354	chr1_203489898_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6511a-3p	203489897	203489902	6mer	203489882	203489903	148.00	-26.54
CAediting_132354	chr1_203489898_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6511b-3p	203489897	203489902	6mer	203489881	203489903	152.00	-29.37
CAediting_132354	chr1_203489898_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6511b-3p	203489897	203489902	6mer	203489881	203489903	152.00	-29.37
CAediting_132354	chr1_203489898_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6784-3p	203489897	203489902	6mer	203489881	203489903	151.00	-31.52
CAediting_132355	chr1_203489932_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4713-5p	203489930	203489936	7mer-m8	203489916	203489937	140.00	-14.63
CAediting_132357	chr1_203489983_+	ENSG00000188783.5	ENST00000343110	hsa-miR-153-5p	203489976	203489983	8mer-1a	203489961	203489983	147.00	-10.06
CAediting_132360	chr1_203490148_+	ENSG00000188783.5	ENST00000343110	hsa-miR-136-5p	203490144	203490150	7mer-m8	203490128	203490151	150.00	-16.46
CAediting_132361	chr1_203490150_+	ENSG00000188783.5	ENST00000343110	hsa-miR-1913	203490148	203490154	7mer-m8	203490134	203490155	140.00	-16.67
CAediting_132364	chr1_203490165_+	ENSG00000188783.5	ENST00000343110	hsa-miR-10523-5p	203490159	203490165	7mer-m8	203490144	203490166	141.00	-16.26
CAediting_132365	chr1_203490174_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3940-3p	203490171	203490177	7mer-m8	203490157	203490178	142.00	-21.15
CAediting_132365	chr1_203490174_+	ENSG00000188783.5	ENST00000343110	hsa-miR-7112-5p	203490168	203490173	6mer	203490152	203490174	143.00	-28.31
CAediting_132369	chr1_203490226_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6777-5p	203490219	203490225	7mer-m8	203490205	203490226	155.00	-28.49
CAediting_132372	chr1_203490249_+	ENSG00000188783.5	ENST00000343110	hsa-miR-1180-5p	203490245	203490252	8mer-1a	203490232	203490252	140.00	-14.92
CAediting_132372	chr1_203490249_+	ENSG00000188783.5	ENST00000343110	hsa-miR-662	203490243	203490249	7mer-m8	203490228	203490250	169.00	-34.02
CAediting_132372	chr1_203490249_+	ENSG00000188783.5	ENST00000343110	hsa-miR-7114-3p	203490245	203490252	8mer-1a	203490232	203490252	140.00	-17.36
CAediting_132372	chr1_203490249_+	ENSG00000188783.5	ENST00000343110	hsa-miR-7973	203490247	203490253	7mer-m8	203490233	203490254	141.00	-12.92
CAediting_132372	chr1_203490249_+	ENSG00000188783.5	ENST00000343110	hsa-miR-7973	203490247	203490253	7mer-m8	203490233	203490254	141.00	-12.92
CAediting_132373	chr1_203490262_+	ENSG00000188783.5	ENST00000343110	hsa-miR-128-1-5p	203490260	203490267	8mer-1a	203490246	203490267	147.00	-21.30
CAediting_132373	chr1_203490262_+	ENSG00000188783.5	ENST00000343110	hsa-miR-128-2-5p	203490260	203490267	8mer-1a	203490245	203490267	140.00	-19.97
CAediting_132373	chr1_203490262_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6781-5p	203490259	203490265	7mer-m8	203490246	203490266	140.00	-18.85
CAediting_132374	chr1_203490274_+	ENSG00000188783.5	ENST00000343110	hsa-miR-337-5p	203490269	203490275	7mer-m8	203490256	203490276	145.00	-13.90
CAediting_132320	chr1_203488416_+	ENSG00000188783.5	ENST00000343110	hsa-miR-361-3p	203488410	203488416	7mer-m8	203488392	203488417	153.00	-20.59
CAediting_132320	chr1_203488416_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3943	203488413	203488419	7mer-m8	203488400	203488420	146.00	-22.28
CAediting_132332	chr1_203489718_+	ENSG00000188783.5	ENST00000343110	hsa-miR-361-3p	203489712	203489718	7mer-m8	203489699	203489719	153.00	-25.10
CAediting_132342	chr1_203489758_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3176	203489755	203489761	7mer-m8	203489744	203489762	160.00	-23.34
CAediting_132342	chr1_203489758_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3922-3p	203489755	203489761	7mer-m8	203489738	203489762	165.00	-28.17
CAediting_132349	chr1_203489846_+	ENSG00000188783.5	ENST00000343110	hsa-miR-1207-3p	203489839	203489845	7mer-m8	203489828	203489846	145.00	-13.53
CAediting_132349	chr1_203489846_+	ENSG00000188783.5	ENST00000343110	hsa-miR-646	203489841	203489847	7mer-m8	203489829	203489848	148.00	-22.30
CAediting_132366	chr1_203490186_+	ENSG00000188783.5	ENST00000343110	hsa-miR-1289	203490184	203490190	7mer-m8	203490170	203490191	154.00	-21.17
CAediting_132366	chr1_203490186_+	ENSG00000188783.5	ENST00000343110	hsa-miR-1289	203490184	203490190	7mer-m8	203490170	203490191	154.00	-21.17
CAediting_132366	chr1_203490186_+	ENSG00000188783.5	ENST00000343110	hsa-miR-5588-3p	203490182	203490188	7mer-m8	203490171	203490189	140.00	-19.98

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_132311	chr1_203488260_+	ENSG00000188783.5	ENST00000343110	hsa-miR-10399-5p	203488255	203488261	7mer-m8	203488241	203488262	144	-11.2
CAediting_132312	chr1_203488261_+	ENSG00000188783.5	ENST00000343110	hsa-miR-10399-5p	203488255	203488261	7mer-m8	203488241	203488262	144	-11.2
CAediting_132328	chr1_203489701_+	ENSG00000188783.5	ENST00000343110	hsa-miR-10399-5p	203489696	203489702	7mer-m8	203489682	203489703	144	-10.07
CAediting_132329	chr1_203489702_+	ENSG00000188783.5	ENST00000343110	hsa-miR-10399-5p	203489696	203489702	7mer-m8	203489682	203489703	144	-10.07
CAediting_132336	chr1_203489737_+	ENSG00000188783.5	ENST00000343110	hsa-miR-125a-3p	203489734	203489741	8mer-1a	203489720	203489741	148	-18.17
CAediting_132321	chr1_203488448_+	ENSG00000188783.5	ENST00000343110	hsa-miR-1281	203488445	203488451	7mer-m8	203488436	203488452	155	-24.04
CAediting_132373	chr1_203490262_+	ENSG00000188783.5	ENST00000343110	hsa-miR-1285-3p	203490256	203490262	7mer-m8	203490242	203490263	140	-15.97
CAediting_132373	chr1_203490262_+	ENSG00000188783.5	ENST00000343110	hsa-miR-1285-3p	203490256	203490262	7mer-m8	203490242	203490263	140	-15.97
CAediting_132367	chr1_203490199_+	ENSG00000188783.5	ENST00000343110	hsa-miR-1304-5p	203490193	203490199	7mer-m8	203490182	203490200	150	-19.81
CAediting_132374	chr1_203490274_+	ENSG00000188783.5	ENST00000343110	hsa-miR-135a-5p	203490268	203490274	7mer-m8	203490253	203490275	145	-10.68
CAediting_132374	chr1_203490274_+	ENSG00000188783.5	ENST00000343110	hsa-miR-135a-5p	203490268	203490274	7mer-m8	203490253	203490275	145	-10.68
CAediting_132374	chr1_203490274_+	ENSG00000188783.5	ENST00000343110	hsa-miR-135b-5p	203490268	203490274	7mer-m8	203490253	203490275	145	-10.69
CAediting_132350	chr1_203489853_+	ENSG00000188783.5	ENST00000343110	hsa-miR-150-5p	203489847	203489853	7mer-m8	203489831	203489854	142	-15.65
CAediting_132373	chr1_203490262_+	ENSG00000188783.5	ENST00000343110	hsa-miR-185-3p	203490260	203490267	8mer-1a	203490246	203490267	145	-19.34
CAediting_132313	chr1_203488319_+	ENSG00000188783.5	ENST00000343110	hsa-miR-29b-2-5p	203488316	203488322	7mer-m8	203488300	203488323	146	-16.34
CAediting_132369	chr1_203490226_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3150a-3p	203490219	203490225	7mer-m8	203490208	203490226	147	-30.03
CAediting_132366	chr1_203490186_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3180-5p	203490180	203490186	7mer-m8	203490162	203490187	154	-17.04
CAediting_132366	chr1_203490186_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3180-5p	203490180	203490186	7mer-m8	203490162	203490187	154	-17.04
CAediting_132366	chr1_203490186_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3180-5p	203490180	203490186	7mer-m8	203490162	203490187	154	-17.04
CAediting_132365	chr1_203490174_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3187-5p	203490168	203490174	7mer-m8	203490152	203490175	155	-28.77
CAediting_132373	chr1_203490262_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3187-5p	203490256	203490262	7mer-m8	203490243	203490263	152	-21.99
CAediting_132369	chr1_203490226_+	ENSG00000188783.5	ENST00000343110	hsa-miR-326	203490222	203490228	7mer-m8	203490210	203490229	140	-14.47
CAediting_132369	chr1_203490226_+	ENSG00000188783.5	ENST00000343110	hsa-miR-330-5p	203490222	203490228	7mer-m8	203490208	203490229	140	-21.67
CAediting_132342	chr1_203489758_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3663-5p	203489755	203489761	7mer-m8	203489746	203489762	141	-19.69
CAediting_132343	chr1_203489761_+	ENSG00000188783.5	ENST00000343110	hsa-miR-3663-5p	203489755	203489761	7mer-m8	203489746	203489762	141	-19.69
CAediting_132373	chr1_203490262_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4492	203490259	203490265	7mer-m8	203490250	203490266	153	-27.59
CAediting_132373	chr1_203490262_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4498	203490259	203490265	7mer-m8	203490244	203490266	149	-19.22
CAediting_132339	chr1_203489750_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4680-5p	203489748	203489754	7mer-1a	203489734	203489754	146	-20.51
CAediting_132369	chr1_203490226_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4700-5p	203490220	203490227	8mer-1a	203490209	203490227	148	-24.11
CAediting_132362	chr1_203490154_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4725-5p	203490152	203490158	7mer-m8	203490139	203490159	145	-19.89
CAediting_132344	chr1_203489773_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4781-3p	203489767	203489774	8mer-1a	203489756	203489774	144	-13.83
CAediting_132314	chr1_203488378_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4794	203488372	203488378	7mer-m8	203488358	203488379	140	-12.3
CAediting_132372	chr1_203490249_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4798-3p	203490244	203490250	7mer-m8	203490229	203490251	146	-16.79
CAediting_132364	chr1_203490165_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4803	203490162	203490168	7mer-m8	203490148	203490169	146	-11.81
CAediting_132352	chr1_203489889_+	ENSG00000188783.5	ENST00000343110	hsa-miR-5001-3p	203489884	203489891	8mer-1a	203489867	203489891	153	-21.14
CAediting_132373	chr1_203490262_+	ENSG00000188783.5	ENST00000343110	hsa-miR-5001-5p	203490259	203490265	7mer-m8	203490243	203490266	146	-22.24
CAediting_132362	chr1_203490154_+	ENSG00000188783.5	ENST00000343110	hsa-miR-504-5p	203490152	203490158	7mer-m8	203490137	203490159	144	-20.85
CAediting_132312	chr1_203488261_+	ENSG00000188783.5	ENST00000343110	hsa-miR-5089-5p	203488259	203488265	7mer-m8	203488244	203488266	148	-14.13
CAediting_132319	chr1_203488401_+	ENSG00000188783.5	ENST00000343110	hsa-miR-5089-5p	203488399	203488405	7mer-m8	203488386	203488406	140	-12.57
CAediting_132329	chr1_203489702_+	ENSG00000188783.5	ENST00000343110	hsa-miR-5089-5p	203489700	203489706	7mer-m8	203489687	203489707	144	-11.8
CAediting_132330	chr1_203489707_+	ENSG00000188783.5	ENST00000343110	hsa-miR-5089-5p	203489700	203489706	7mer-m8	203489687	203489707	144	-11.8
CAediting_132330	chr1_203489707_+	ENSG00000188783.5	ENST00000343110	hsa-miR-512-3p	203489705	203489711	7mer-m8	203489691	203489712	149	-14.26
CAediting_132331	chr1_203489710_+	ENSG00000188783.5	ENST00000343110	hsa-miR-512-3p	203489705	203489711	7mer-m8	203489691	203489712	149	-14.26
CAediting_132330	chr1_203489707_+	ENSG00000188783.5	ENST00000343110	hsa-miR-512-3p	203489705	203489711	7mer-m8	203489691	203489712	149	-14.26
CAediting_132331	chr1_203489710_+	ENSG00000188783.5	ENST00000343110	hsa-miR-512-3p	203489705	203489711	7mer-m8	203489691	203489712	149	-14.26
CAediting_132365	chr1_203490174_+	ENSG00000188783.5	ENST00000343110	hsa-miR-5189-5p	203490168	203490174	7mer-m8	203490153	203490175	145	-23.74
CAediting_132373	chr1_203490262_+	ENSG00000188783.5	ENST00000343110	hsa-miR-5189-5p	203490256	203490262	7mer-m8	203490241	203490263	143	-21.12
CAediting_132355	chr1_203489932_+	ENSG00000188783.5	ENST00000343110	hsa-miR-5571-3p	203489928	203489934	7mer-m8	203489917	203489935	140	-14.76
CAediting_132349	chr1_203489846_+	ENSG00000188783.5	ENST00000343110	hsa-miR-562	203489842	203489848	7mer-m8	203489829	203489849	151	-14.2
CAediting_132374	chr1_203490274_+	ENSG00000188783.5	ENST00000343110	hsa-miR-5680	203490272	203490278	7mer-m8	203490257	203490279	141	-11.08
CAediting_132349	chr1_203489846_+	ENSG00000188783.5	ENST00000343110	hsa-miR-5697	203489843	203489849	7mer-m8	203489829	203489850	146	-18.01
CAediting_132313	chr1_203488319_+	ENSG00000188783.5	ENST00000343110	hsa-miR-5705	203488315	203488320	6mer	203488300	203488321	146	-16.7
CAediting_132373	chr1_203490262_+	ENSG00000188783.5	ENST00000343110	hsa-miR-5787	203490258	203490264	7mer-m8	203490247	203490265	151	-24.66
CAediting_132373	chr1_203490262_+	ENSG00000188783.5	ENST00000343110	hsa-miR-612	203490256	203490262	7mer-m8	203490239	203490263	150	-24.22
CAediting_132342	chr1_203489758_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6131	203489756	203489762	7mer-m8	203489745	203489763	140	-17.94
CAediting_132343	chr1_203489761_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6131	203489756	203489762	7mer-m8	203489745	203489763	140	-17.94
CAediting_132327	chr1_203489693_+	ENSG00000188783.5	ENST00000343110	hsa-miR-640	203489686	203489692	7mer-m8	203489672	203489693	154	-17.39
CAediting_132311	chr1_203488260_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6504-3p	203488255	203488261	7mer-m8	203488241	203488262	148	-14.35
CAediting_132312	chr1_203488261_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6504-3p	203488255	203488261	7mer-m8	203488241	203488262	148	-14.35
CAediting_132328	chr1_203489701_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6504-3p	203489696	203489702	7mer-m8	203489684	203489703	140	-10.45
CAediting_132329	chr1_203489702_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6504-3p	203489696	203489702	7mer-m8	203489684	203489703	140	-10.45
CAediting_132330	chr1_203489707_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6506-5p	203489701	203489707	7mer-m8	203489686	203489708	144	-14.64
CAediting_132365	chr1_203490174_+	ENSG00000188783.5	ENST00000343110	hsa-miR-661	203490170	203490176	7mer-m8	203490154	203490177	141	-19.74
CAediting_132314	chr1_203488378_+	ENSG00000188783.5	ENST00000343110	hsa-miR-664a-5p	203488372	203488378	7mer-m8	203488356	203488379	141	-13.79
CAediting_132352	chr1_203489889_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6738-3p	203489885	203489891	7mer-m8	203489869	203489892	152	-19.71
CAediting_132353	chr1_203489892_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6738-3p	203489885	203489891	7mer-m8	203489869	203489892	152	-19.71
CAediting_132362	chr1_203490154_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6747-3p	203490149	203490155	7mer-m8	203490136	203490156	145	-16.15
CAediting_132362	chr1_203490154_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6752-3p	203490150	203490156	7mer-m8	203490137	203490157	149	-15.5
CAediting_132321	chr1_203488448_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6763-3p	203488441	203488447	7mer-m8	203488428	203488448	147	-24.74
CAediting_132369	chr1_203490226_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6763-5p	203490219	203490225	7mer-m8	203490210	203490226	150	-27.27
CAediting_132320	chr1_203488416_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6778-3p	203488412	203488418	7mer-m8	203488399	203488419	142	-16.15
CAediting_132321	chr1_203488448_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6778-3p	203488444	203488450	7mer-m8	203488431	203488451	148	-22.02
CAediting_132332	chr1_203489718_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6778-3p	203489714	203489720	7mer-m8	203489701	203489721	147	-15.69
CAediting_132350	chr1_203489853_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6778-3p	203489849	203489855	7mer-m8	203489836	203489856	140	-14.56
CAediting_132321	chr1_203488448_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6791-3p	203488445	203488450	6mer	203488432	203488451	149	-30.03
CAediting_132352	chr1_203489889_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6836-3p	203489882	203489888	7mer-m8	203489869	203489889	140	-17.23
CAediting_132365	chr1_203490174_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6860	203490168	203490174	7mer-m8	203490157	203490175	148	-22.97
CAediting_132373	chr1_203490262_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6860	203490256	203490262	7mer-m8	203490243	203490263	148	-20.84
CAediting_132332	chr1_203489718_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6878-3p	203489716	203489723	8mer-1a	203489703	203489723	142	-16.55
CAediting_132333	chr1_203489723_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6878-3p	203489716	203489723	8mer-1a	203489703	203489723	142	-16.55
CAediting_132311	chr1_203488260_+	ENSG00000188783.5	ENST00000343110	hsa-miR-7151-3p	203488253	203488260	8mer-1a	203488240	203488260	144	-16.51
CAediting_132328	chr1_203489701_+	ENSG00000188783.5	ENST00000343110	hsa-miR-7151-3p	203489694	203489701	8mer-1a	203489681	203489701	144	-13.71
CAediting_132348	chr1_203489836_+	ENSG00000188783.5	ENST00000343110	hsa-miR-7151-3p	203489829	203489835	7mer-m8	203489815	203489836	143	-18.04
CAediting_132331	chr1_203489710_+	ENSG00000188783.5	ENST00000343110	hsa-miR-759	203489708	203489714	7mer-m8	203489694	203489715	145	-14.48
CAediting_132373	chr1_203490262_+	ENSG00000188783.5	ENST00000343110	hsa-miR-762	203490259	203490265	7mer-m8	203490245	203490266	150	-29.62
CAediting_132370	chr1_203490237_+	ENSG00000188783.5	ENST00000343110	hsa-miR-7977	203490230	203490236	7mer-m8	203490220	203490237	140	-13.07
CAediting_132348	chr1_203489836_+	ENSG00000188783.5	ENST00000343110	hsa-miR-8052	203489835	203489841	7mer-1a	203489823	203489841	143	-23.67
CAediting_132369	chr1_203490226_+	ENSG00000188783.5	ENST00000343110	hsa-miR-8089	203490220	203490227	8mer-1a	203490203	203490227	150	-26.23
CAediting_132353	chr1_203489892_+	ENSG00000188783.5	ENST00000343110	hsa-miR-891b	203489890	203489897	8mer-1a	203489878	203489897	146	-15.5
CAediting_132365	chr1_203490174_+	ENSG00000188783.5	ENST00000343110	hsa-miR-939-3p	203490169	203490175	7mer-m8	203490156	203490176	140	-15.63

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000188783.5	ENST00000343110	hsa-miR-624-3p	203489538	203489544	7mer-m8	203489525	203489545	147	-12.13
CAediting_688081	chr9_63819627_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4477b	203488945	203488951	7mer-m8	203488930	203488952	148	-14.28
CAediting_1229413	chr17_67471544_+	ENSG00000188783.5	ENST00000343110	hsa-miR-548aa	203489081	203489087	7mer-m8	203489064	203489088	140	-12.81
CAediting_1229413	chr17_67471544_+	ENSG00000188783.5	ENST00000343110	hsa-miR-548aa	203487123	203487129	7mer-m8	203487106	203487130	150	-13.91
CAediting_1229413	chr17_67471544_+	ENSG00000188783.5	ENST00000343110	hsa-miR-548aa	203489401	203489407	7mer-m8	203489382	203489408	148	-15.4
CAediting_86358	chr1_109598906_+	ENSG00000188783.5	ENST00000343110	hsa-miR-197-5p	203488689	203488694	6mer	203488673	203488695	140	-29.08
CAediting_86358	chr1_109598906_+	ENSG00000188783.5	ENST00000343110	hsa-miR-197-5p	203487073	203487080	8mer-1a	203487059	203487080	146	-21.77
CAediting_86358	chr1_109598906_+	ENSG00000188783.5	ENST00000343110	hsa-miR-197-5p	203487814	203487820	7mer-m8	203487801	203487821	165	-27.36
CAediting_77128	chr1_85133844_+	ENSG00000188783.5	ENST00000343110	hsa-miR-4423-3p	203488880	203488886	7mer-m8	203488867	203488887	140	-12.33
CAediting_1399425	chr20_1392958_-	ENSG00000188783.5	ENST00000343110	hsa-miR-6869-5p	203491243	203491249	7mer-m8	203491229	203491250	140	-19.82
CAediting_396018	chr5_1062918_-	ENSG00000188783.5	ENST00000343110	hsa-miR-4635	203490194	203490200	7mer-m8	203490181	203490201	158	-22.34
CAediting_442554	chr5_154685830_+	ENSG00000188783.5	ENST00000343110	hsa-miR-1303	203488729	203488735	7mer-m8	203488716	203488736	150	-21.58
CAediting_524911	chr7_5495852_-	ENSG00000188783.5	ENST00000343110	hsa-miR-589-3p	203486902	203486909	8mer-1a	203486887	203486909	163	-23.82
CAediting_573000	chr7_92204081_-	ENSG00000188783.5	ENST00000343110	hsa-miR-1285-5p	203488466	203488472	7mer-m8	203488453	203488473	164	-24.16
CAediting_468389	chr6_31355314_-	ENSG00000188783.5	ENST00000343110	hsa-miR-6891-5p	203487905	203487911	7mer-m8	203487897	203487915	151	-24.37
CAediting_468389	chr6_31355314_-	ENSG00000188783.5	ENST00000343110	hsa-miR-6891-5p	203487908	203487914	7mer-m8	203487897	203487915	151	-24.37
CAediting_468389	chr6_31355314_-	ENSG00000188783.5	ENST00000343110	hsa-miR-6891-5p	203489374	203489380	7mer-m8	203489363	203489381	151	-22.93
CAediting_468389	chr6_31355314_-	ENSG00000188783.5	ENST00000343110	hsa-miR-6891-5p	203487181	203487186	6mer	203487169	203487187	149	-29.17

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1368054	chr19_46709310_-	ENSG00000188783.5	ENST00000343110	hsa-miR-320e	203488487	203488493	7mer-m8	203488476	203488494	149	-16.67
CAediting_1368054	chr19_46709310_-	ENSG00000188783.5	ENST00000343110	hsa-miR-320e	203486979	203486985	7mer-m8	203486968	203486986	151	-22.4
CAediting_1054808	chr15_66496985_-	ENSG00000188783.5	ENST00000343110	hsa-miR-4512	203488167	203488173	7mer-m8	203488152	203488174	145	-15.8
CAediting_1054808	chr15_66496985_-	ENSG00000188783.5	ENST00000343110	hsa-miR-4512	203489207	203489213	7mer-m8	203489193	203489214	152	-18.33
CAediting_396018	chr5_1062918_-	ENSG00000188783.5	ENST00000343110	hsa-miR-4635	203487053	203487059	7mer-m8	203487040	203487060	150	-17.4
CAediting_396018	chr5_1062918_-	ENSG00000188783.5	ENST00000343110	hsa-miR-4635	203489087	203489093	7mer-m8	203489077	203489094	151	-17
CAediting_396018	chr5_1062918_-	ENSG00000188783.5	ENST00000343110	hsa-miR-4635	203490428	203490433	6mer	203490417	203490434	142	-21.03
CAediting_1524209	chrX_134546392_-	ENSG00000188783.5	ENST00000343110	hsa-miR-503-5p	203490771	203490777	7mer-m8	203490755	203490778	149	-20.37
CAediting_748296	chr10_51299626_+	ENSG00000188783.5	ENST00000343110	hsa-miR-605-3p	203488181	203488187	7mer-m8	203488168	203488188	154	-17.56
CAediting_580943	chr7_100356700_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6840-3p	203487989	203487995	7mer-m8	203487975	203487996	143	-25.21
CAediting_580943	chr7_100356700_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6840-3p	203487200	203487206	7mer-m8	203487185	203487207	155	-27.64
CAediting_580943	chr7_100356700_+	ENSG00000188783.5	ENST00000343110	hsa-miR-6840-3p	203487340	203487346	7mer-m8	203487326	203487347	140	-22.54
CAediting_468389	chr6_31355314_-	ENSG00000188783.5	ENST00000343110	hsa-miR-6891-5p	203489030	203489036	7mer-m8	203489017	203489037	152	-19.69

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for PRELP

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000343110.2	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_132311	ENST00000343110.2	chr1_203488260_+	-2057.30	-2054.30	-2111.00
CAediting_132312	ENST00000343110.2	chr1_203488261_+	-2054.60	-2054.30	-2111.00
CAediting_132313	ENST00000343110.2	chr1_203488319_+	-2054.60	-2054.30	-2111.00
CAediting_132314	ENST00000343110.2	chr1_203488378_+	-2053.80	-2054.30	-2111.00
CAediting_132315	ENST00000343110.2	chr1_203488382_+	-2058.10	-2054.30	-2111.00
CAediting_132316	ENST00000343110.2	chr1_203488384_+	-2057.00	-2054.30	-2111.00
CAediting_132317	ENST00000343110.2	chr1_203488398_+	-2054.20	-2054.30	-2111.00
CAediting_132318	ENST00000343110.2	chr1_203488400_+	-2054.80	-2054.30	-2111.00
CAediting_132319	ENST00000343110.2	chr1_203488401_+	-2054.30	-2054.30	-2111.00
CAediting_132320	ENST00000343110.2	chr1_203488416_+	-2053.40	-2054.30	-2111.00
CAediting_132321	ENST00000343110.2	chr1_203488448_+	-2053.80	-2054.30	-2111.00
CAediting_132322	ENST00000343110.2	chr1_203488461_+	-2053.60	-2054.30	-2111.00
CAediting_132323	ENST00000343110.2	chr1_203488465_+	-2059.50	-2054.30	-2111.00
CAediting_132324	ENST00000343110.2	chr1_203488520_+	-2054.30	-2054.30	-2111.00
CAediting_132325	ENST00000343110.2	chr1_203488525_+	-2054.30	-2054.30	-2111.00
CAediting_132326	ENST00000343110.2	chr1_203488527_+	-2054.30	-2054.30	-2111.00
CAediting_132327	ENST00000343110.2	chr1_203489693_+	-2053.90	-2054.30	-2111.00
CAediting_132328	ENST00000343110.2	chr1_203489701_+	-2054.40	-2054.30	-2111.00
CAediting_132329	ENST00000343110.2	chr1_203489702_+	-2054.30	-2054.30	-2111.00
CAediting_132330	ENST00000343110.2	chr1_203489707_+	-2053.60	-2054.30	-2111.00
CAediting_132331	ENST00000343110.2	chr1_203489710_+	-2053.90	-2054.30	-2111.00
CAediting_132332	ENST00000343110.2	chr1_203489718_+	-2056.40	-2054.30	-2111.00
CAediting_132333	ENST00000343110.2	chr1_203489723_+	-2055.00	-2054.30	-2111.00
CAediting_132334	ENST00000343110.2	chr1_203489724_+	-2054.00	-2054.30	-2111.00
CAediting_132335	ENST00000343110.2	chr1_203489732_+	-2058.70	-2054.30	-2111.00
CAediting_132336	ENST00000343110.2	chr1_203489737_+	-2053.90	-2054.30	-2111.00
CAediting_132337	ENST00000343110.2	chr1_203489742_+	-2053.40	-2054.30	-2111.00
CAediting_132338	ENST00000343110.2	chr1_203489747_+	-2053.60	-2054.30	-2111.00
CAediting_132339	ENST00000343110.2	chr1_203489750_+	-2053.40	-2054.30	-2111.00
CAediting_132340	ENST00000343110.2	chr1_203489755_+	-2056.90	-2054.30	-2111.00
CAediting_132341	ENST00000343110.2	chr1_203489756_+	-2054.30	-2054.30	-2111.00
CAediting_132342	ENST00000343110.2	chr1_203489758_+	-2053.70	-2054.30	-2111.00
CAediting_132343	ENST00000343110.2	chr1_203489761_+	-2053.60	-2054.30	-2111.00
CAediting_132344	ENST00000343110.2	chr1_203489773_+	-2053.90	-2054.30	-2111.00
CAediting_132345	ENST00000343110.2	chr1_203489775_+	-2053.90	-2054.30	-2111.00
CAediting_132346	ENST00000343110.2	chr1_203489801_+	-2054.60	-2054.30	-2111.00
CAediting_132347	ENST00000343110.2	chr1_203489828_+	-2054.00	-2054.30	-2111.00
CAediting_132348	ENST00000343110.2	chr1_203489836_+	-2054.00	-2054.30	-2111.00
CAediting_132349	ENST00000343110.2	chr1_203489846_+	-2054.30	-2054.30	-2111.00
CAediting_132350	ENST00000343110.2	chr1_203489853_+	-2060.20	-2054.30	-2111.00
CAediting_132351	ENST00000343110.2	chr1_203489859_+	-2057.70	-2054.30	-2111.00
CAediting_132352	ENST00000343110.2	chr1_203489889_+	-2055.60	-2054.30	-2111.00
CAediting_132353	ENST00000343110.2	chr1_203489892_+	-2058.00	-2054.30	-2111.00
CAediting_132354	ENST00000343110.2	chr1_203489898_+	-2059.50	-2054.30	-2111.00
CAediting_132355	ENST00000343110.2	chr1_203489932_+	-2055.60	-2054.30	-2111.00
CAediting_132356	ENST00000343110.2	chr1_203489941_+	-2057.40	-2054.30	-2111.00
CAediting_132357	ENST00000343110.2	chr1_203489983_+	-2060.70	-2054.30	-2111.00
CAediting_132358	ENST00000343110.2	chr1_203489985_+	-2054.10	-2054.30	-2111.00
CAediting_132359	ENST00000343110.2	chr1_203490135_+	-2060.50	-2054.30	-2111.00
CAediting_132360	ENST00000343110.2	chr1_203490148_+	-2054.30	-2054.30	-2111.00
CAediting_132361	ENST00000343110.2	chr1_203490150_+	-2053.40	-2054.30	-2111.00
CAediting_132362	ENST00000343110.2	chr1_203490154_+	-2057.90	-2054.30	-2111.00
CAediting_132363	ENST00000343110.2	chr1_203490162_+	-2050.90	-2054.30	-2111.00
CAediting_132364	ENST00000343110.2	chr1_203490165_+	-2054.30	-2054.30	-2111.00
CAediting_132365	ENST00000343110.2	chr1_203490174_+	-2053.60	-2054.30	-2111.00
CAediting_132366	ENST00000343110.2	chr1_203490186_+	-2053.80	-2054.30	-2111.00
CAediting_132367	ENST00000343110.2	chr1_203490199_+	-2053.60	-2054.30	-2111.00
CAediting_132368	ENST00000343110.2	chr1_203490204_+	-2053.70	-2054.30	-2111.00
CAediting_132369	ENST00000343110.2	chr1_203490226_+	-2053.60	-2054.30	-2111.00
CAediting_132370	ENST00000343110.2	chr1_203490237_+	-2053.70	-2054.30	-2111.00
CAediting_132371	ENST00000343110.2	chr1_203490240_+	-2054.30	-2054.30	-2111.00
CAediting_132372	ENST00000343110.2	chr1_203490249_+	-2053.40	-2054.30	-2111.00
CAediting_132373	ENST00000343110.2	chr1_203490262_+	-2058.40	-2054.30	-2111.00
CAediting_132374	ENST00000343110.2	chr1_203490274_+	-2055.20	-2054.30	-2111.00

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Relation with ADAR for PRELP

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_132329	chr1_203489702_+	0.000449012493346631	0.473510432730768	.	.	.	.
STAD	CAediting_132334	chr1_203489724_+	0.0312906430721526	0.26947974066895	.	.	.	.
STAD	CAediting_132341	chr1_203489756_+	0.00167900288859673	0.387972319149988	.	.	.	.
OV	CAediting_132371	chr1_203490240_+	0.000220690857641827	0.324672374376663	.	.	.	.

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Relation with cancer stages for PRELP

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
OV	clinical_stage	CAediting_132341	chr1_203489756_+	0.0335617182639561	-0.277174418594265
STAD	pathologic_stage	CAediting_132341	chr1_203489756_+	0.0291263310494238	0.279535600877815

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Relation with survival for PRELP

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for PRELP

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for PRELP

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene