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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: PI4K2A (CAeditome ID:55361) |
Gene summary for PI4K2A |
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Gene information | Gene symbol | PI4K2A | Gene ID | 55361 |
Gene name | phosphatidylinositol 4-kinase type 2 alpha | |
Synonyms | PI4KII|PIK42A | |
Cytomap | 10q24.2 | |
Type of gene | protein-coding | |
Description | phosphatidylinositol 4-kinase type 2-alphaphosphatidylinositol 4-kinase type II (PI4KII)phosphatidylinositol 4-kinase type II-alpha | |
Modification date | 20210518 | |
UniProtAcc | Q9BTU6 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
PI4K2A | GO:0004430 | Phosphatidylinositol 4-kinase type 2-alpha | 11279162 |
PI4K2A | GO:0005524 | Phosphatidylinositol 4-kinase type 2-alpha | 24675427 |
PI4K2A | GO:0035651 | Phosphatidylinositol 4-kinase type 2-alpha | 21998198 |
PI4K2A | GO:0006661 | Phosphatidylinositol 4-kinase type 2-alpha | 11279162 |
PI4K2A | GO:0046854 | Phosphatidylinositol 4-kinase type 2-alpha | 25168678 |
PI4K2A | GO:0005886 | Phosphatidylinositol 4-kinase type 2-alpha | 0000052 |
PI4K2A | GO:0005887 | Phosphatidylinositol 4-kinase type 2-alpha | 11279162 |
PI4K2A | GO:0031224 | Phosphatidylinositol 4-kinase type 2-alpha | 24675427 |
PI4K2A | GO:0045121 | Phosphatidylinositol 4-kinase type 2-alpha | 11279162 |
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RNA A-to-I events for PI4K2A |
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CAediting_775480(97642558, +), CAediting_775481(97645354, +), CAediting_775482(97645824, +), CAediting_775483(97650382, +), CAediting_775484(97650411, +), CAediting_775485(97650417, +), CAediting_775486(97650421, +), CAediting_775487(97650434, +), CAediting_775488(97650462, +), CAediting_775489(97650465, +), CAediting_775490(97650482, +), CAediting_775491(97650491, +), CAediting_775492(97655223, +), CAediting_775493(97655255, +), CAediting_775494(97655810, +), CAediting_775495(97657940, +), CAediting_775496(97657962, +), CAediting_775497(97658094, +), CAediting_775498(97663571, +), CAediting_775499(97663761, +), CAediting_775500(97663769, +), CAediting_775501(97663770, +), CAediting_775502(97663893, +), CAediting_775503(97663898, +), CAediting_775504(97663903, +), CAediting_775505(97663905, +), CAediting_775506(97663930, +), CAediting_775507(97663947, +), CAediting_775508(97664918, +), CAediting_775509(97668553, +), CAediting_775510(97669930, +), CAediting_775511(97670010, +), CAediting_775512(97671353, +), CAediting_775513(97671806, +), CAediting_775514(97671922, +), CAediting_775515(97672801, +), CAediting_775516(97676118, +), |
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RNA editing positional annotations for PI4K2A using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_775480 | chr10_97642558_+ | intronic |
CAediting_775481 | chr10_97645354_+ | intronic |
CAediting_775482 | chr10_97645824_+ | intronic |
CAediting_775483 | chr10_97650382_+ | intronic |
CAediting_775484 | chr10_97650411_+ | intronic |
CAediting_775485 | chr10_97650417_+ | intronic |
CAediting_775486 | chr10_97650421_+ | intronic |
CAediting_775487 | chr10_97650434_+ | intronic |
CAediting_775488 | chr10_97650462_+ | intronic |
CAediting_775489 | chr10_97650465_+ | intronic |
CAediting_775490 | chr10_97650482_+ | intronic |
CAediting_775491 | chr10_97650491_+ | intronic |
CAediting_775492 | chr10_97655223_+ | intronic |
CAediting_775493 | chr10_97655255_+ | intronic |
CAediting_775494 | chr10_97655810_+ | intronic |
CAediting_775495 | chr10_97657940_+ | intronic |
CAediting_775496 | chr10_97657962_+ | intronic |
CAediting_775497 | chr10_97658094_+ | intronic |
CAediting_775498 | chr10_97663571_+ | intronic |
CAediting_775499 | chr10_97663761_+ | intronic |
CAediting_775500 | chr10_97663769_+ | intronic |
CAediting_775501 | chr10_97663770_+ | intronic |
CAediting_775502 | chr10_97663893_+ | intronic |
CAediting_775503 | chr10_97663898_+ | intronic |
CAediting_775504 | chr10_97663903_+ | intronic |
CAediting_775505 | chr10_97663905_+ | intronic |
CAediting_775506 | chr10_97663930_+ | intronic |
CAediting_775507 | chr10_97663947_+ | intronic |
CAediting_775508 | chr10_97664918_+ | exonic |
CAediting_775509 | chr10_97668553_+ | intronic |
CAediting_775510 | chr10_97669930_+ | intronic |
CAediting_775511 | chr10_97670010_+ | intronic |
CAediting_775512 | chr10_97671353_+ | intronic |
CAediting_775513 | chr10_97671806_+ | intronic |
CAediting_775514 | chr10_97671922_+ | intronic |
CAediting_775515 | chr10_97672801_+ | intronic |
CAediting_775516 | chr10_97676118_+ | UTR3 |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_775480 | chr10_97642558_+ | SINE | Alu | AluSc |
CAediting_775481 | chr10_97645354_+ | SINE | Alu | AluY |
CAediting_775482 | chr10_97645824_+ | SINE | Alu | Alu |
CAediting_775483 | chr10_97650382_+ | SINE | Alu | AluSz6 |
CAediting_775484 | chr10_97650411_+ | SINE | Alu | AluSz6 |
CAediting_775485 | chr10_97650417_+ | SINE | Alu | AluSz6 |
CAediting_775486 | chr10_97650421_+ | SINE | Alu | AluSz6 |
CAediting_775487 | chr10_97650434_+ | SINE | Alu | AluSz6 |
CAediting_775488 | chr10_97650462_+ | SINE | Alu | AluSz6 |
CAediting_775489 | chr10_97650465_+ | SINE | Alu | AluSz6 |
CAediting_775490 | chr10_97650482_+ | SINE | Alu | AluSz6 |
CAediting_775491 | chr10_97650491_+ | SINE | Alu | AluSz6 |
CAediting_775492 | chr10_97655223_+ | SINE | Alu | AluSx |
CAediting_775493 | chr10_97655255_+ | SINE | Alu | AluSx |
CAediting_775494 | chr10_97655810_+ | SINE | Alu | AluSz |
CAediting_775495 | chr10_97657940_+ | SINE | Alu | AluSx1 |
CAediting_775496 | chr10_97657962_+ | SINE | Alu | AluSx1 |
CAediting_775497 | chr10_97658094_+ | SINE | Alu | AluSx1 |
CAediting_775498 | chr10_97663571_+ | SINE | Alu | AluSx1 |
CAediting_775499 | chr10_97663761_+ | SINE | Alu | AluSx1 |
CAediting_775500 | chr10_97663769_+ | SINE | Alu | AluSx1 |
CAediting_775501 | chr10_97663770_+ | SINE | Alu | AluSx1 |
CAediting_775502 | chr10_97663893_+ | SINE | Alu | AluJr |
CAediting_775503 | chr10_97663898_+ | SINE | Alu | AluJr |
CAediting_775504 | chr10_97663903_+ | SINE | Alu | AluJr |
CAediting_775505 | chr10_97663905_+ | SINE | Alu | AluJr |
CAediting_775506 | chr10_97663930_+ | SINE | Alu | AluJr |
CAediting_775507 | chr10_97663947_+ | SINE | Alu | AluJr |
CAediting_775509 | chr10_97668553_+ | SINE | Alu | AluJb |
CAediting_775510 | chr10_97669930_+ | SINE | Alu | AluJr |
CAediting_775511 | chr10_97670010_+ | SINE | Alu | AluJr |
CAediting_775512 | chr10_97671353_+ | SINE | Alu | FRAM |
CAediting_775513 | chr10_97671806_+ | SINE | Alu | AluSx1 |
CAediting_775514 | chr10_97671922_+ | SINE | Alu | AluSx1 |
CAediting_775515 | chr10_97672801_+ | SINE | Alu | AluSx3 |
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RNA A-to-I editing events in the alternative splicing sites for PI4K2A |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PI4K2A |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for PI4K2A |
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The effects of the RNA editing to the miRNA binding sites for PI4K2A |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_775516 | chr10_97676118_+ | ENSG00000155252.13 | ENST00000370631 | hsa-miR-1915-5p | 97676112 | 97676119 | 8mer-1a | 97676098 | 97676119 | 146.00 | -19.44 |
CAediting_775516 | chr10_97676118_+ | ENSG00000155252.13 | ENST00000370631 | hsa-miR-502-5p | 97676113 | 97676120 | 8mer-1a | 97676100 | 97676120 | 155.00 | -13.83 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_775516 | chr10_97676118_+ | ENSG00000155252.13 | ENST00000370631 | hsa-miR-6844 | 97676114 | 97676120 | 7mer-1a | 97676098 | 97676120 | 144 | -15.31 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_980496 | chr14_31014685_- | ENSG00000155252.13 | ENST00000370631 | hsa-miR-624-3p | 97675111 | 97675116 | 6mer | 97675097 | 97675117 | 140 | -20.5 |
CAediting_980496 | chr14_31014685_- | ENSG00000155252.13 | ENST00000370631 | hsa-miR-624-3p | 97675395 | 97675400 | 6mer | 97675381 | 97675401 | 141 | -20.94 |
CAediting_688081 | chr9_63819627_+ | ENSG00000155252.13 | ENST00000370631 | hsa-miR-4477b | 97676169 | 97676175 | 7mer-m8 | 97676155 | 97676176 | 142 | -10.59 |
CAediting_1368054 | chr19_46709310_- | ENSG00000155252.13 | ENST00000370631 | hsa-miR-320e | 97675688 | 97675694 | 7mer-m8 | 97675679 | 97675695 | 149 | -18.76 |
CAediting_86358 | chr1_109598906_+ | ENSG00000155252.13 | ENST00000370631 | hsa-miR-197-5p | 97675001 | 97675006 | 6mer | 97674982 | 97675007 | 143 | -33.58 |
CAediting_86358 | chr1_109598906_+ | ENSG00000155252.13 | ENST00000370631 | hsa-miR-197-5p | 97673885 | 97673892 | 8mer-1a | 97673868 | 97673892 | 159 | -27.46 |
CAediting_77128 | chr1_85133844_+ | ENSG00000155252.13 | ENST00000370631 | hsa-miR-4423-3p | 97675584 | 97675590 | 7mer-m8 | 97675571 | 97675591 | 140 | -18.08 |
CAediting_396018 | chr5_1062918_- | ENSG00000155252.13 | ENST00000370631 | hsa-miR-4635 | 97675793 | 97675799 | 7mer-m8 | 97675781 | 97675800 | 143 | -11.79 |
CAediting_580943 | chr7_100356700_+ | ENSG00000155252.13 | ENST00000370631 | hsa-miR-6840-3p | 97675341 | 97675347 | 7mer-m8 | 97675327 | 97675348 | 145 | -27.52 |
CAediting_524911 | chr7_5495852_- | ENSG00000155252.13 | ENST00000370631 | hsa-miR-589-3p | 97676213 | 97676220 | 8mer-1a | 97676197 | 97676220 | 140 | -13.2 |
CAediting_468389 | chr6_31355314_- | ENSG00000155252.13 | ENST00000370631 | hsa-miR-6891-5p | 97674317 | 97674323 | 7mer-m8 | 97674306 | 97674324 | 140 | -19.25 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_393 | chr1_1167164_+ | ENSG00000155252.13 | ENST00000370631 | hsa-miR-200b-3p | 97676379 | 97676385 | 7mer-m8 | 97676365 | 97676386 | 146 | -14.12 |
CAediting_604450 | chr7_133034877_- | ENSG00000155252.13 | ENST00000370631 | hsa-miR-3654 | 97675715 | 97675721 | 7mer-m8 | 97675704 | 97675722 | 140 | -11.43 |
CAediting_604450 | chr7_133034877_- | ENSG00000155252.13 | ENST00000370631 | hsa-miR-3654 | 97676059 | 97676065 | 7mer-m8 | 97676049 | 97676066 | 155 | -21.62 |
CAediting_1054808 | chr15_66496985_- | ENSG00000155252.13 | ENST00000370631 | hsa-miR-4512 | 97675908 | 97675914 | 7mer-m8 | 97675896 | 97675915 | 143 | -19.38 |
CAediting_1524209 | chrX_134546392_- | ENSG00000155252.13 | ENST00000370631 | hsa-miR-503-5p | 97674788 | 97674794 | 7mer-m8 | 97674773 | 97674795 | 154 | -23.82 |
CAediting_580943 | chr7_100356700_+ | ENSG00000155252.13 | ENST00000370631 | hsa-miR-6840-3p | 97675737 | 97675743 | 7mer-m8 | 97675723 | 97675744 | 146 | -21.79 |
CAediting_580943 | chr7_100356700_+ | ENSG00000155252.13 | ENST00000370631 | hsa-miR-6840-3p | 97676154 | 97676160 | 7mer-m8 | 97676139 | 97676161 | 145 | -22.07 |
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The effects of the RNA editing to the stability of the RNA structures for PI4K2A |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for PI4K2A |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for PI4K2A |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for PI4K2A |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for PI4K2A |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PI4K2A |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |