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Editing gene: SYNJ2BP (CAeditome ID:55333)

Gene summary for SYNJ2BP

Gene summary

Gene information	Gene symbol	SYNJ2BP
	Gene ID	55333
	Gene name	synaptojanin 2 binding protein
	Synonyms	ARIP2\|OMP25
	Cytomap	14q24.2
	Type of gene	protein-coding
	Description	synaptojanin-2-binding proteinactivin receptor interacting protein 5mitochondrial outer membrane protein 25
	Modification date	20210518
	UniProtAcc	P57105
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
SYNJ2BP	GO:0070373	Synaptojanin-2-binding protein	24025447
SYNJ2BP	GO:0005739	Synaptojanin-2-binding protein	18845145
SYNJ2BP	GO:0031307	Synaptojanin-2-binding protein	32973005

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RNA A-to-I events for SYNJ2BP

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000213463.4

RNA A-to-I editing events in Cancer.

CAediting_1000891(70367319, -), CAediting_1000892(70367320, -), CAediting_1000893(70367334, -), CAediting_1000894(70367338, -), CAediting_1000895(70367342, -), CAediting_1000896(70367350, -), CAediting_1000897(70367358, -), CAediting_1000898(70367392, -), CAediting_1000899(70367394, -), CAediting_1000900(70367396, -), CAediting_1000901(70367399, -), CAediting_1000902(70367405, -), CAediting_1000903(70367414, -), CAediting_1000904(70367424, -), CAediting_1000905(70367427, -), CAediting_1000906(70367438, -), CAediting_1000907(70367440, -), CAediting_1000908(70367450, -), CAediting_1000909(70367453, -), CAediting_1000910(70367462, -), CAediting_1000911(70367475, -), CAediting_1000912(70367479, -), CAediting_1000913(70367480, -), CAediting_1000914(70367499, -), CAediting_1000915(70367500, -), CAediting_1000916(70367510, -), CAediting_1000917(70367515, -), CAediting_1000918(70367518, -), CAediting_1000919(70367524, -), CAediting_1000920(70367529, -), CAediting_1000921(70367536, -), CAediting_1000922(70367558, -), CAediting_1000923(70367560, -), CAediting_1000924(70369120, -), CAediting_1000925(70369154, -), CAediting_1000926(70369155, -), CAediting_1000927(70369158, -), CAediting_1000928(70369164, -), CAediting_1000929(70369189, -), CAediting_1000930(70369193, -), CAediting_1000931(70369199, -), CAediting_1000932(70369203, -), CAediting_1000933(70369205, -), CAediting_1000934(70369208, -), CAediting_1000935(70369213, -), CAediting_1000936(70369231, -), CAediting_1000937(70369235, -), CAediting_1000938(70369241, -), CAediting_1000939(70369257, -), CAediting_1000940(70369264, -), CAediting_1000941(70369270, -), CAediting_1000942(70369271, -), CAediting_1000943(70369287, -), CAediting_1000944(70369288, -), CAediting_1000945(70369289, -), CAediting_1000946(70369297, -), CAediting_1000947(70369298, -), CAediting_1000948(70369300, -), CAediting_1000949(70369307, -), CAediting_1000950(70369310, -), CAediting_1000951(70369319, -), CAediting_1000952(70369322, -), CAediting_1000953(70369327, -), CAediting_1000954(70369359, -), CAediting_1000955(70369367, -), CAediting_1000956(70369386, -), CAediting_1000957(70371422, -), CAediting_1000958(70371435, -), CAediting_1000959(70371442, -), CAediting_1000960(70371443, -), CAediting_1000961(70371446, -), CAediting_1000962(70371448, -), CAediting_1000963(70371450, -), CAediting_1000964(70371460, -), CAediting_1000965(70371465, -), CAediting_1000966(70371470, -), CAediting_1000967(70371475, -), CAediting_1000968(70371480, -), CAediting_1000969(70371481, -), CAediting_1000970(70371485, -), CAediting_1000971(70371489, -), CAediting_1000972(70371496, -), CAediting_1000973(70371500, -), CAediting_1000974(70371502, -), CAediting_1000975(70371515, -), CAediting_1000976(70371530, -), CAediting_1000977(70371534, -), CAediting_1000978(70371551, -), CAediting_1000979(70371556, -), CAediting_1000980(70371557, -), CAediting_1000981(70371583, -), CAediting_1000982(70371586, -), CAediting_1000983(70371587, -), CAediting_1000984(70371589, -), CAediting_1000985(70371592, -), CAediting_1000986(70371594, -), CAediting_1000987(70371597, -), CAediting_1000988(70371601, -), CAediting_1000989(70371607, -), CAediting_1000990(70371612, -), CAediting_1000991(70371613, -), CAediting_1000992(70371614, -), CAediting_1000993(70371622, -), CAediting_1000994(70371632, -), CAediting_1000995(70371637, -), CAediting_1000996(70371638, -), CAediting_1000997(70371643, -), CAediting_1000998(70371646, -), CAediting_1000999(70371651, -), CAediting_1001000(70371652, -), CAediting_1001001(70371654, -), CAediting_1001002(70371659, -), CAediting_1001003(70371663, -), CAediting_1001004(70371681, -), CAediting_1001005(70371689, -), CAediting_1001006(70371696, -), CAediting_1001007(70371698, -), CAediting_1001008(70371706, -), CAediting_1001009(70372220, -), CAediting_1001010(70375199, -), CAediting_1001011(70375262, -), CAediting_1001012(70375264, -), CAediting_1001013(70375270, -), CAediting_1001014(70375294, -), CAediting_1001015(70375317, -), CAediting_1001016(70375318, -), CAediting_1001017(70375330, -), CAediting_1001018(70375396, -), CAediting_1001019(70375399, -), CAediting_1001020(70378487, -), CAediting_1001021(70378489, -), CAediting_1001022(70378519, -), CAediting_1001023(70378542, -), CAediting_1001024(70378559, -), CAediting_1001025(70378564, -), CAediting_1001026(70378567, -), CAediting_1001027(70378580, -), CAediting_1001028(70378581, -), CAediting_1001029(70378583, -), CAediting_1001030(70378598, -), CAediting_1001031(70381993, -), CAediting_1001032(70381994, -), CAediting_1001033(70382047, -), CAediting_1001034(70382173, -), CAediting_1001035(70382184, -), CAediting_1001036(70382189, -), CAediting_1001037(70382190, -), CAediting_1001038(70382202, -), CAediting_1001039(70385560, -), CAediting_1001040(70385576, -), CAediting_1001041(70385577, -), CAediting_1001042(70385584, -), CAediting_1001043(70385585, -), CAediting_1001044(70385600, -), CAediting_1001045(70385676, -), CAediting_1001046(70401882, -), CAediting_1001047(70401916, -), CAediting_1001048(70402615, -), CAediting_1001049(70404908, -), CAediting_1001050(70408894, -), CAediting_1001051(70408901, -), CAediting_1001052(70409063, -), CAediting_1001053(70409143, -), CAediting_1001054(70409165, -), CAediting_1001055(70410006, -), CAediting_1001056(70410344, -), CAediting_1001057(70412505, -),

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RNA editing positional annotations for SYNJ2BP using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1000891	chr14_70367319_-	UTR3
CAediting_1000892	chr14_70367320_-	UTR3
CAediting_1000893	chr14_70367334_-	UTR3
CAediting_1000894	chr14_70367338_-	UTR3
CAediting_1000895	chr14_70367342_-	UTR3
CAediting_1000896	chr14_70367350_-	UTR3
CAediting_1000897	chr14_70367358_-	UTR3
CAediting_1000898	chr14_70367392_-	UTR3
CAediting_1000899	chr14_70367394_-	UTR3
CAediting_1000900	chr14_70367396_-	UTR3
CAediting_1000901	chr14_70367399_-	UTR3
CAediting_1000902	chr14_70367405_-	UTR3
CAediting_1000903	chr14_70367414_-	UTR3
CAediting_1000904	chr14_70367424_-	UTR3
CAediting_1000905	chr14_70367427_-	UTR3
CAediting_1000906	chr14_70367438_-	UTR3
CAediting_1000907	chr14_70367440_-	UTR3
CAediting_1000908	chr14_70367450_-	UTR3
CAediting_1000909	chr14_70367453_-	UTR3
CAediting_1000910	chr14_70367462_-	UTR3
CAediting_1000911	chr14_70367475_-	UTR3
CAediting_1000912	chr14_70367479_-	UTR3
CAediting_1000913	chr14_70367480_-	UTR3
CAediting_1000914	chr14_70367499_-	UTR3
CAediting_1000915	chr14_70367500_-	UTR3
CAediting_1000916	chr14_70367510_-	UTR3
CAediting_1000917	chr14_70367515_-	UTR3
CAediting_1000918	chr14_70367518_-	UTR3
CAediting_1000919	chr14_70367524_-	UTR3
CAediting_1000920	chr14_70367529_-	UTR3
CAediting_1000921	chr14_70367536_-	UTR3
CAediting_1000922	chr14_70367558_-	UTR3
CAediting_1000923	chr14_70367560_-	UTR3
CAediting_1000924	chr14_70369120_-	UTR3
CAediting_1000925	chr14_70369154_-	UTR3
CAediting_1000926	chr14_70369155_-	UTR3
CAediting_1000927	chr14_70369158_-	UTR3
CAediting_1000928	chr14_70369164_-	UTR3
CAediting_1000929	chr14_70369189_-	UTR3
CAediting_1000930	chr14_70369193_-	UTR3
CAediting_1000931	chr14_70369199_-	UTR3
CAediting_1000932	chr14_70369203_-	UTR3
CAediting_1000933	chr14_70369205_-	UTR3
CAediting_1000934	chr14_70369208_-	UTR3
CAediting_1000935	chr14_70369213_-	UTR3
CAediting_1000936	chr14_70369231_-	UTR3
CAediting_1000937	chr14_70369235_-	UTR3
CAediting_1000938	chr14_70369241_-	UTR3
CAediting_1000939	chr14_70369257_-	UTR3
CAediting_1000940	chr14_70369264_-	UTR3
CAediting_1000941	chr14_70369270_-	UTR3
CAediting_1000942	chr14_70369271_-	UTR3
CAediting_1000943	chr14_70369287_-	UTR3
CAediting_1000944	chr14_70369288_-	UTR3
CAediting_1000945	chr14_70369289_-	UTR3
CAediting_1000946	chr14_70369297_-	UTR3
CAediting_1000947	chr14_70369298_-	UTR3
CAediting_1000948	chr14_70369300_-	UTR3
CAediting_1000949	chr14_70369307_-	UTR3
CAediting_1000950	chr14_70369310_-	UTR3
CAediting_1000951	chr14_70369319_-	UTR3
CAediting_1000952	chr14_70369322_-	UTR3
CAediting_1000953	chr14_70369327_-	UTR3
CAediting_1000954	chr14_70369359_-	UTR3
CAediting_1000955	chr14_70369367_-	UTR3
CAediting_1000956	chr14_70369386_-	UTR3
CAediting_1000957	chr14_70371422_-	UTR3
CAediting_1000958	chr14_70371435_-	UTR3
CAediting_1000959	chr14_70371442_-	UTR3
CAediting_1000960	chr14_70371443_-	UTR3
CAediting_1000961	chr14_70371446_-	UTR3
CAediting_1000962	chr14_70371448_-	UTR3
CAediting_1000963	chr14_70371450_-	UTR3
CAediting_1000964	chr14_70371460_-	UTR3
CAediting_1000965	chr14_70371465_-	UTR3
CAediting_1000966	chr14_70371470_-	UTR3
CAediting_1000967	chr14_70371475_-	UTR3
CAediting_1000968	chr14_70371480_-	UTR3
CAediting_1000969	chr14_70371481_-	UTR3
CAediting_1000970	chr14_70371485_-	UTR3
CAediting_1000971	chr14_70371489_-	UTR3
CAediting_1000972	chr14_70371496_-	UTR3
CAediting_1000973	chr14_70371500_-	UTR3
CAediting_1000974	chr14_70371502_-	UTR3
CAediting_1000975	chr14_70371515_-	UTR3
CAediting_1000976	chr14_70371530_-	UTR3
CAediting_1000977	chr14_70371534_-	UTR3
CAediting_1000978	chr14_70371551_-	UTR3
CAediting_1000979	chr14_70371556_-	UTR3
CAediting_1000980	chr14_70371557_-	UTR3
CAediting_1000981	chr14_70371583_-	UTR3
CAediting_1000982	chr14_70371586_-	UTR3
CAediting_1000983	chr14_70371587_-	UTR3
CAediting_1000984	chr14_70371589_-	UTR3
CAediting_1000985	chr14_70371592_-	UTR3
CAediting_1000986	chr14_70371594_-	UTR3
CAediting_1000987	chr14_70371597_-	UTR3
CAediting_1000988	chr14_70371601_-	UTR3
CAediting_1000989	chr14_70371607_-	UTR3
CAediting_1000990	chr14_70371612_-	UTR3
CAediting_1000991	chr14_70371613_-	UTR3
CAediting_1000992	chr14_70371614_-	UTR3
CAediting_1000993	chr14_70371622_-	UTR3
CAediting_1000994	chr14_70371632_-	UTR3
CAediting_1000995	chr14_70371637_-	UTR3
CAediting_1000996	chr14_70371638_-	UTR3
CAediting_1000997	chr14_70371643_-	UTR3
CAediting_1000998	chr14_70371646_-	UTR3
CAediting_1000999	chr14_70371651_-	UTR3
CAediting_1001000	chr14_70371652_-	UTR3
CAediting_1001001	chr14_70371654_-	UTR3
CAediting_1001002	chr14_70371659_-	UTR3
CAediting_1001003	chr14_70371663_-	UTR3
CAediting_1001004	chr14_70371681_-	UTR3
CAediting_1001005	chr14_70371689_-	UTR3
CAediting_1001006	chr14_70371696_-	UTR3
CAediting_1001007	chr14_70371698_-	UTR3
CAediting_1001008	chr14_70371706_-	UTR3
CAediting_1001009	chr14_70372220_-	UTR3
CAediting_1001010	chr14_70375199_-	ncRNA_intronic
CAediting_1001011	chr14_70375262_-	ncRNA_intronic
CAediting_1001012	chr14_70375264_-	ncRNA_intronic
CAediting_1001013	chr14_70375270_-	ncRNA_intronic
CAediting_1001014	chr14_70375294_-	ncRNA_intronic
CAediting_1001015	chr14_70375317_-	ncRNA_intronic
CAediting_1001016	chr14_70375318_-	ncRNA_intronic
CAediting_1001017	chr14_70375330_-	ncRNA_intronic
CAediting_1001018	chr14_70375396_-	ncRNA_intronic
CAediting_1001019	chr14_70375399_-	ncRNA_intronic
CAediting_1001020	chr14_70378487_-	ncRNA_intronic
CAediting_1001021	chr14_70378489_-	ncRNA_intronic
CAediting_1001022	chr14_70378519_-	ncRNA_intronic
CAediting_1001023	chr14_70378542_-	ncRNA_intronic
CAediting_1001024	chr14_70378559_-	ncRNA_intronic
CAediting_1001025	chr14_70378564_-	ncRNA_intronic
CAediting_1001026	chr14_70378567_-	ncRNA_intronic
CAediting_1001027	chr14_70378580_-	ncRNA_intronic
CAediting_1001028	chr14_70378581_-	ncRNA_intronic
CAediting_1001029	chr14_70378583_-	ncRNA_intronic
CAediting_1001030	chr14_70378598_-	ncRNA_intronic
CAediting_1001031	chr14_70381993_-	ncRNA_intronic
CAediting_1001032	chr14_70381994_-	ncRNA_intronic
CAediting_1001033	chr14_70382047_-	ncRNA_intronic
CAediting_1001034	chr14_70382173_-	ncRNA_intronic
CAediting_1001035	chr14_70382184_-	ncRNA_intronic
CAediting_1001036	chr14_70382189_-	ncRNA_intronic
CAediting_1001037	chr14_70382190_-	ncRNA_intronic
CAediting_1001038	chr14_70382202_-	ncRNA_intronic
CAediting_1001039	chr14_70385560_-	ncRNA_intronic
CAediting_1001040	chr14_70385576_-	ncRNA_intronic
CAediting_1001041	chr14_70385577_-	ncRNA_intronic
CAediting_1001042	chr14_70385584_-	ncRNA_intronic
CAediting_1001043	chr14_70385585_-	ncRNA_intronic
CAediting_1001044	chr14_70385600_-	ncRNA_intronic
CAediting_1001045	chr14_70385676_-	ncRNA_intronic
CAediting_1001046	chr14_70401882_-	ncRNA_intronic
CAediting_1001047	chr14_70401916_-	ncRNA_intronic
CAediting_1001048	chr14_70402615_-	ncRNA_intronic
CAediting_1001049	chr14_70404908_-	ncRNA_intronic
CAediting_1001050	chr14_70408894_-	ncRNA_intronic
CAediting_1001051	chr14_70408901_-	ncRNA_intronic
CAediting_1001052	chr14_70409063_-	ncRNA_intronic
CAediting_1001053	chr14_70409143_-	ncRNA_intronic
CAediting_1001054	chr14_70409165_-	ncRNA_intronic
CAediting_1001055	chr14_70410006_-	ncRNA_intronic
CAediting_1001056	chr14_70410344_-	ncRNA_intronic
CAediting_1001057	chr14_70412505_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1000891	chr14_70367319_-	SINE	Alu	AluSg
CAediting_1000892	chr14_70367320_-	SINE	Alu	AluSg
CAediting_1000893	chr14_70367334_-	SINE	Alu	AluSg
CAediting_1000894	chr14_70367338_-	SINE	Alu	AluSg
CAediting_1000895	chr14_70367342_-	SINE	Alu	AluSg
CAediting_1000896	chr14_70367350_-	SINE	Alu	AluSg
CAediting_1000897	chr14_70367358_-	SINE	Alu	AluSg
CAediting_1000898	chr14_70367392_-	SINE	Alu	AluSg
CAediting_1000899	chr14_70367394_-	SINE	Alu	AluSg
CAediting_1000900	chr14_70367396_-	SINE	Alu	AluSg
CAediting_1000901	chr14_70367399_-	SINE	Alu	AluSg
CAediting_1000902	chr14_70367405_-	SINE	Alu	AluSg
CAediting_1000903	chr14_70367414_-	SINE	Alu	AluSg
CAediting_1000904	chr14_70367424_-	SINE	Alu	AluSg
CAediting_1000905	chr14_70367427_-	SINE	Alu	AluSg
CAediting_1000906	chr14_70367438_-	SINE	Alu	AluSg
CAediting_1000907	chr14_70367440_-	SINE	Alu	AluSg
CAediting_1000908	chr14_70367450_-	SINE	Alu	AluSg
CAediting_1000909	chr14_70367453_-	SINE	Alu	AluSg
CAediting_1000910	chr14_70367462_-	SINE	Alu	AluSg
CAediting_1000911	chr14_70367475_-	SINE	Alu	AluSg
CAediting_1000912	chr14_70367479_-	SINE	Alu	AluSg
CAediting_1000913	chr14_70367480_-	SINE	Alu	AluSg
CAediting_1000914	chr14_70367499_-	SINE	Alu	AluSg
CAediting_1000915	chr14_70367500_-	SINE	Alu	AluSg
CAediting_1000916	chr14_70367510_-	SINE	Alu	AluSg
CAediting_1000917	chr14_70367515_-	SINE	Alu	AluSg
CAediting_1000918	chr14_70367518_-	SINE	Alu	AluSg
CAediting_1000919	chr14_70367524_-	SINE	Alu	AluSg
CAediting_1000920	chr14_70367529_-	SINE	Alu	AluSg
CAediting_1000921	chr14_70367536_-	SINE	Alu	AluSg
CAediting_1000922	chr14_70367558_-	SINE	Alu	AluSg
CAediting_1000923	chr14_70367560_-	SINE	Alu	AluSg
CAediting_1000924	chr14_70369120_-	SINE	Alu	AluJb
CAediting_1000925	chr14_70369154_-	SINE	Alu	AluJb
CAediting_1000926	chr14_70369155_-	SINE	Alu	AluJb
CAediting_1000927	chr14_70369158_-	SINE	Alu	AluJb
CAediting_1000928	chr14_70369164_-	SINE	Alu	AluJb
CAediting_1000929	chr14_70369189_-	SINE	Alu	AluJb
CAediting_1000930	chr14_70369193_-	SINE	Alu	AluJb
CAediting_1000931	chr14_70369199_-	SINE	Alu	AluJb
CAediting_1000932	chr14_70369203_-	SINE	Alu	AluJb
CAediting_1000933	chr14_70369205_-	SINE	Alu	AluJb
CAediting_1000934	chr14_70369208_-	SINE	Alu	AluJb
CAediting_1000935	chr14_70369213_-	SINE	Alu	AluJb
CAediting_1000936	chr14_70369231_-	SINE	Alu	AluJb
CAediting_1000937	chr14_70369235_-	SINE	Alu	AluJb
CAediting_1000938	chr14_70369241_-	SINE	Alu	AluJb
CAediting_1000939	chr14_70369257_-	SINE	Alu	AluJb
CAediting_1000940	chr14_70369264_-	SINE	Alu	AluJb
CAediting_1000941	chr14_70369270_-	SINE	Alu	AluJb
CAediting_1000942	chr14_70369271_-	SINE	Alu	AluJb
CAediting_1000943	chr14_70369287_-	SINE	Alu	AluJb
CAediting_1000944	chr14_70369288_-	SINE	Alu	AluJb
CAediting_1000945	chr14_70369289_-	SINE	Alu	AluJb
CAediting_1000946	chr14_70369297_-	SINE	Alu	AluJb
CAediting_1000947	chr14_70369298_-	SINE	Alu	AluJb
CAediting_1000948	chr14_70369300_-	SINE	Alu	AluJb
CAediting_1000949	chr14_70369307_-	SINE	Alu	AluJb
CAediting_1000950	chr14_70369310_-	SINE	Alu	AluJb
CAediting_1000951	chr14_70369319_-	SINE	Alu	AluJb
CAediting_1000952	chr14_70369322_-	SINE	Alu	AluJb
CAediting_1000953	chr14_70369327_-	SINE	Alu	AluJb
CAediting_1000954	chr14_70369359_-	SINE	Alu	AluJb
CAediting_1000955	chr14_70369367_-	SINE	Alu	AluJb
CAediting_1000956	chr14_70369386_-	SINE	Alu	AluJb
CAediting_1000957	chr14_70371422_-	SINE	Alu	AluSg
CAediting_1000958	chr14_70371435_-	SINE	Alu	AluSg
CAediting_1000959	chr14_70371442_-	SINE	Alu	AluSg
CAediting_1000960	chr14_70371443_-	SINE	Alu	AluSg
CAediting_1000961	chr14_70371446_-	SINE	Alu	AluSg
CAediting_1000962	chr14_70371448_-	SINE	Alu	AluSg
CAediting_1000963	chr14_70371450_-	SINE	Alu	AluSg
CAediting_1000964	chr14_70371460_-	SINE	Alu	AluSg
CAediting_1000965	chr14_70371465_-	SINE	Alu	AluSg
CAediting_1000966	chr14_70371470_-	SINE	Alu	AluSg
CAediting_1000967	chr14_70371475_-	SINE	Alu	AluSg
CAediting_1000968	chr14_70371480_-	SINE	Alu	AluSg
CAediting_1000969	chr14_70371481_-	SINE	Alu	AluSg
CAediting_1000970	chr14_70371485_-	SINE	Alu	AluSg
CAediting_1000971	chr14_70371489_-	SINE	Alu	AluSg
CAediting_1000972	chr14_70371496_-	SINE	Alu	AluSg
CAediting_1000973	chr14_70371500_-	SINE	Alu	AluSg
CAediting_1000974	chr14_70371502_-	SINE	Alu	AluSg
CAediting_1000975	chr14_70371515_-	SINE	Alu	AluSg
CAediting_1000976	chr14_70371530_-	SINE	Alu	AluSg
CAediting_1000977	chr14_70371534_-	SINE	Alu	AluSg
CAediting_1000978	chr14_70371551_-	SINE	Alu	AluSg
CAediting_1000979	chr14_70371556_-	SINE	Alu	AluSg
CAediting_1000980	chr14_70371557_-	SINE	Alu	AluSg
CAediting_1000981	chr14_70371583_-	SINE	Alu	AluSg
CAediting_1000982	chr14_70371586_-	SINE	Alu	AluSg
CAediting_1000983	chr14_70371587_-	SINE	Alu	AluSg
CAediting_1000984	chr14_70371589_-	SINE	Alu	AluSg
CAediting_1000985	chr14_70371592_-	SINE	Alu	AluSg
CAediting_1000986	chr14_70371594_-	SINE	Alu	AluSg
CAediting_1000987	chr14_70371597_-	SINE	Alu	AluSg
CAediting_1000988	chr14_70371601_-	SINE	Alu	AluSg
CAediting_1000989	chr14_70371607_-	SINE	Alu	AluSg
CAediting_1000990	chr14_70371612_-	SINE	Alu	AluSg
CAediting_1000991	chr14_70371613_-	SINE	Alu	AluSg
CAediting_1000992	chr14_70371614_-	SINE	Alu	AluSg
CAediting_1000993	chr14_70371622_-	SINE	Alu	AluSg
CAediting_1000994	chr14_70371632_-	SINE	Alu	AluSg
CAediting_1000995	chr14_70371637_-	SINE	Alu	AluSg
CAediting_1000996	chr14_70371638_-	SINE	Alu	AluSg
CAediting_1000997	chr14_70371643_-	SINE	Alu	AluSg
CAediting_1000998	chr14_70371646_-	SINE	Alu	AluSg
CAediting_1000999	chr14_70371651_-	SINE	Alu	AluSg
CAediting_1001000	chr14_70371652_-	SINE	Alu	AluSg
CAediting_1001001	chr14_70371654_-	SINE	Alu	AluSg
CAediting_1001002	chr14_70371659_-	SINE	Alu	AluSg
CAediting_1001003	chr14_70371663_-	SINE	Alu	AluSg
CAediting_1001004	chr14_70371681_-	SINE	Alu	AluSg
CAediting_1001005	chr14_70371689_-	SINE	Alu	AluSg
CAediting_1001006	chr14_70371696_-	SINE	Alu	AluSg
CAediting_1001007	chr14_70371698_-	SINE	Alu	AluSg
CAediting_1001008	chr14_70371706_-	SINE	Alu	AluSg
CAediting_1001009	chr14_70372220_-	SINE	Alu	FLAM_C
CAediting_1001010	chr14_70375199_-	SINE	Alu	AluSz6
CAediting_1001011	chr14_70375262_-	SINE	Alu	AluSz6
CAediting_1001012	chr14_70375264_-	SINE	Alu	AluSz6
CAediting_1001013	chr14_70375270_-	SINE	Alu	AluSz6
CAediting_1001014	chr14_70375294_-	SINE	Alu	AluSz6
CAediting_1001015	chr14_70375317_-	SINE	Alu	AluSz6
CAediting_1001016	chr14_70375318_-	SINE	Alu	AluSz6
CAediting_1001017	chr14_70375330_-	SINE	Alu	AluSz6
CAediting_1001018	chr14_70375396_-	SINE	Alu	AluSz6
CAediting_1001019	chr14_70375399_-	SINE	Alu	AluSz6
CAediting_1001020	chr14_70378487_-	SINE	Alu	AluJo
CAediting_1001021	chr14_70378489_-	SINE	Alu	AluJo
CAediting_1001022	chr14_70378519_-	SINE	Alu	AluJo
CAediting_1001023	chr14_70378542_-	SINE	Alu	AluJo
CAediting_1001024	chr14_70378559_-	SINE	Alu	AluJo
CAediting_1001025	chr14_70378564_-	SINE	Alu	AluJo
CAediting_1001026	chr14_70378567_-	SINE	Alu	AluJo
CAediting_1001027	chr14_70378580_-	SINE	Alu	AluJo
CAediting_1001028	chr14_70378581_-	SINE	Alu	AluJo
CAediting_1001029	chr14_70378583_-	SINE	Alu	AluJo
CAediting_1001031	chr14_70381993_-	SINE	Alu	AluY
CAediting_1001032	chr14_70381994_-	SINE	Alu	AluY
CAediting_1001033	chr14_70382047_-	SINE	Alu	AluY
CAediting_1001034	chr14_70382173_-	SINE	Alu	AluY
CAediting_1001035	chr14_70382184_-	SINE	Alu	AluY
CAediting_1001036	chr14_70382189_-	SINE	Alu	AluY
CAediting_1001037	chr14_70382190_-	SINE	Alu	AluY
CAediting_1001038	chr14_70382202_-	SINE	Alu	AluY
CAediting_1001039	chr14_70385560_-	SINE	Alu	AluSz6
CAediting_1001040	chr14_70385576_-	SINE	Alu	AluSz6
CAediting_1001041	chr14_70385577_-	SINE	Alu	AluSz6
CAediting_1001042	chr14_70385584_-	SINE	Alu	AluSz6
CAediting_1001043	chr14_70385585_-	SINE	Alu	AluSz6
CAediting_1001044	chr14_70385600_-	SINE	Alu	AluSz6
CAediting_1001045	chr14_70385676_-	SINE	Alu	AluSz6
CAediting_1001046	chr14_70401882_-	SINE	Alu	AluJr
CAediting_1001047	chr14_70401916_-	SINE	Alu	AluJr
CAediting_1001048	chr14_70402615_-	SINE	Alu	FLAM_A
CAediting_1001049	chr14_70404908_-	SINE	Alu	AluJb
CAediting_1001050	chr14_70408894_-	SINE	Alu	AluJr
CAediting_1001051	chr14_70408901_-	SINE	Alu	AluJr
CAediting_1001052	chr14_70409063_-	SINE	Alu	AluJr
CAediting_1001053	chr14_70409143_-	SINE	Alu	AluJr
CAediting_1001054	chr14_70409165_-	SINE	Alu	AluJr
CAediting_1001055	chr14_70410006_-	SINE	Alu	AluJb
CAediting_1001056	chr14_70410344_-	SINE	Alu	AluJb

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RNA A-to-I editing events in the alternative splicing sites for SYNJ2BP

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000213463.4.SYNJ2BP.

Correlation between RNA A-to-I editing and PSI for ENSG00000213463.4.SYNJ2BP.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SYNJ2BP

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for SYNJ2BP

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SYNJ2BP

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SYNJ2BP

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for SYNJ2BP

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LIHC	CAediting_1000894	chr14_70367338_-	0.0284849331455689	0.172151324582376	.	.	.	.
LUAD	CAediting_1000894	chr14_70367338_-	.	.	0.0124983971354963	0.281612319288104	.	.
BLCA	CAediting_1000900	chr14_70367396_-	0.0033620841546958	0.229103117136838	.	.	.	.
LGG	CAediting_1000900	chr14_70367396_-	0.000329111024236332	0.231326967133529	.	.	.	.
BRCA	CAediting_1000900	chr14_70367396_-	2.60170830664439e-10	0.235617378167986	.	.	.	.
LIHC	CAediting_1000900	chr14_70367396_-	0.0233454644699919	0.130260730826912	.	.	.	.
LUAD	CAediting_1000900	chr14_70367396_-	0.0283312674733557	0.130824130633178	.	.	.	.
STAD	CAediting_1000900	chr14_70367396_-	0.000947520677375274	0.229750583515177	.	.	.	.
THCA	CAediting_1000900	chr14_70367396_-	0.0330062003823694	0.131270592507021	.	.	.	.
PCPG	CAediting_1000900	chr14_70367396_-	0.00154551316668962	0.278122506553731	.	.	.	.
TGCT	CAediting_1000900	chr14_70367396_-	0.0183927321128569	0.264721070123054	.	.	.	.
THYM	CAediting_1000900	chr14_70367396_-	0.0153113802936171	0.328464030834059	.	.	.	.
LGG	CAediting_1000901	chr14_70367399_-	0.000243596644600753	0.419591001623636	.	.	.	.
BRCA	CAediting_1000901	chr14_70367399_-	0.000790577751770572	0.164513603824386	.	.	.	.
LIHC	CAediting_1000901	chr14_70367399_-	0.0152393883602136	0.165318827169906	.	.	.	.
HNSC	CAediting_1000901	chr14_70367399_-	1.68086143427263e-06	0.590307123107352	.	.	.	.
THCA	CAediting_1000901	chr14_70367399_-	0.027839571682346	0.286454541839171	.	.	.	.
UCEC	CAediting_1000901	chr14_70367399_-	.	.	.	.	0.0480693628120142	0.265382977920099
SKCM	CAediting_1000901	chr14_70367399_-	.	.	.	.	0.0222829471033931	0.258540473951236
SARC	CAediting_1000901	chr14_70367399_-	.	.	.	.	0.0289634228392884	0.268993246828661
COAD	CAediting_1000908	chr14_70367450_-	.	.	0.0348154007169093	0.237822104239069	.	.
PCPG	CAediting_1000908	chr14_70367450_-	0.0260497021259817	0.262254974891024	.	.	.	.
BRCA	CAediting_1000916	chr14_70367510_-	7.18486787292431e-06	0.178299087648377	.	.	.	.
KIRC	CAediting_1000949	chr14_70369307_-	.	.	0.0237826661191205	0.19975395497522	.	.
STAD	CAediting_1000969	chr14_70371481_-	.	.	0.0116777585454072	0.158322952291225	.	.
PRAD	CAediting_1000978	chr14_70371551_-	.	.	0.0127510153337814	0.20361449025448	.	.
KIRP	CAediting_1000979	chr14_70371556_-	.	.	.	.	0.0355328169677462	0.223172481266054
LIHC	CAediting_1000980	chr14_70371557_-	.	.	.	.	0.0242344926562343	0.290712735385907
HNSC	CAediting_1000980	chr14_70371557_-	.	.	.	.	0.0117882841859044	0.265886830530305
SKCM	CAediting_1000989	chr14_70371607_-	.	.	0.0250219713837258	0.21561221271988	.	.

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Relation with cancer stages for SYNJ2BP

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_1000900	chr14_70367396_-	0.034838570202823	0.166444412826185
BRCA	pathologic_stage	CAediting_1000900	chr14_70367396_-	0.0380925097728703	0.0791425958207972
KIRC	pathologic_stage	CAediting_1000894	chr14_70367338_-	0.000947631744344882	0.33723909295674
KIRC	pathologic_stage	CAediting_1000900	chr14_70367396_-	0.00421127909393871	0.14498959186243
KIRC	pathologic_stage	CAediting_1000908	chr14_70367450_-	0.0340395482588267	0.166143091282462
KIRC	pathologic_stage	CAediting_1000916	chr14_70367510_-	0.0371526310154797	0.112582883144809
KIRC	pathologic_stage	CAediting_1000980	chr14_70371557_-	0.0316376696673955	0.173833638479724
KIRC	pathologic_stage	CAediting_1000989	chr14_70371607_-	0.00690195361627989	0.187691441198252
KIRP	clinical_stage	CAediting_1000979	chr14_70371556_-	0.000110596946259055	0.478390630526055
KIRP	clinical_stage	CAediting_1000980	chr14_70371557_-	0.0198175921979874	0.328585325627992
KIRP	pathologic_stage	CAediting_1000979	chr14_70371556_-	9.86376341745661e-06	0.464185611447615
KIRP	pathologic_stage	CAediting_1000980	chr14_70371557_-	0.000972349959661221	0.399677162146816
LIHC	pathologic_stage	CAediting_1000894	chr14_70367338_-	0.0135624275570872	0.202531366850602
LIHC	pathologic_stage	CAediting_1000901	chr14_70367399_-	0.00784692912537827	-0.188434961556587
LUAD	pathologic_stage	CAediting_1000908	chr14_70367450_-	0.00865460097974109	0.223506406004899
LUAD	pathologic_stage	CAediting_1000989	chr14_70371607_-	0.0251351201483645	-0.219550424826225
LUSC	pathologic_stage	CAediting_1000916	chr14_70367510_-	0.0396025280391703	0.151450327533997
SKCM	pathologic_stage	CAediting_1000978	chr14_70371551_-	0.0322016421011953	0.247618478240579
THCA	pathologic_stage	CAediting_1000900	chr14_70367396_-	0.0138854678279906	0.151836191927524
THCA	pathologic_stage	CAediting_1000901	chr14_70367399_-	0.000352811606602897	0.449683052514639

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Relation with survival for SYNJ2BP

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LIHC	CAediting_1000908	chr14_70367450_-	0.00514753989215566	0.0489447	21.8704
LUAD	CAediting_1000979	chr14_70371556_-	0.0288750942971326	0.0134976	399938

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RelatedDrugs for SYNJ2BP

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SYNJ2BP

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene