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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: DDX19A (CAeditome ID:55308)

Gene summary for DDX19A

check button Gene summary
Gene informationGene symbol

DDX19A

Gene ID

55308

Gene nameDEAD-box helicase 19A
SynonymsDDX19-DDX19L|DDX19L
Cytomap

16q22.1

Type of geneprotein-coding
DescriptionATP-dependent RNA helicase DDX19ADDX19-like proteinDEAD (Asp-Glu-Ala-As) box polypeptide 19ADEAD (Asp-Glu-Ala-Asp) box polypeptide 19ADEAD box protein 19ARNA helicase
Modification date20210518
UniProtAcc

Q9NUU7

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for DDX19A

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000168872.14
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1129724(70300254, +), CAediting_1129725(70306172, +), CAediting_1129726(70306183, +), CAediting_1129727(70307424, +), CAediting_1129728(70307427, +), CAediting_1129729(70307463, +), CAediting_1129730(70307492, +), CAediting_1129731(70307502, +), CAediting_1129732(70307504, +), CAediting_1129733(70307508, +), CAediting_1129734(70307628, +), CAediting_1129735(70307631, +), CAediting_1129736(70308765, +), CAediting_1129737(70309636, +), CAediting_1129738(70309697, +), CAediting_1129739(70309698, +), CAediting_1129740(70309724, +), CAediting_1129741(70309739, +), CAediting_1129742(70309743, +), CAediting_1129743(70309775, +), CAediting_1129744(70309982, +), CAediting_1129745(70310043, +), CAediting_1129746(70310284, +), CAediting_1129747(70311343, +), CAediting_1129748(70312982, +), CAediting_1129749(70313854, +), CAediting_1129750(70313871, +), CAediting_1129751(70313989, +), CAediting_1129752(70348444, +), CAediting_1129753(70348465, +), CAediting_1129754(70348520, +), CAediting_1129755(70348539, +), CAediting_1129756(70348568, +), CAediting_1129757(70348577, +), CAediting_1129758(70348578, +), CAediting_1129759(70348684, +), CAediting_1129760(70348702, +), CAediting_1129761(70348720, +), CAediting_1129762(70348730, +), CAediting_1129763(70357583, +), CAediting_1129764(70357660, +), CAediting_1129765(70358211, +), CAediting_1129766(70358561, +), CAediting_1129767(70359600, +), CAediting_1129768(70359601, +), CAediting_1129769(70359622, +), CAediting_1129770(70359623, +), CAediting_1129771(70359649, +), CAediting_1129772(70359654, +), CAediting_1129773(70359660, +), CAediting_1129774(70359669, +), CAediting_1129775(70359670, +), CAediting_1129776(70359706, +), CAediting_1129777(70360017, +), CAediting_1129778(70360025, +), CAediting_1129779(70360026, +), CAediting_1129780(70360052, +), CAediting_1129781(70360531, +), CAediting_1129782(70360539, +), CAediting_1129783(70360783, +), CAediting_1129784(70360864, +), CAediting_1129785(70360881, +), CAediting_1129786(70360926, +), CAediting_1129787(70360940, +), CAediting_1129788(70360952, +), CAediting_1129789(70361023, +), CAediting_1129790(70361782, +), CAediting_1129791(70361790, +), CAediting_1129792(70361830, +), CAediting_1129793(70361850, +), CAediting_1129794(70361851, +), CAediting_1129795(70361858, +), CAediting_1129796(70361872, +), CAediting_1129797(70361875, +), CAediting_1129798(70361886, +), CAediting_1129799(70361889, +), CAediting_1129800(70361909, +), CAediting_1129801(70361915, +), CAediting_1129802(70361916, +), CAediting_1129803(70361937, +), CAediting_1129804(70361938, +), CAediting_1129805(70361965, +), CAediting_1129806(70361975, +), CAediting_1129807(70361987, +), CAediting_1129808(70362060, +), CAediting_1129809(70362064, +), CAediting_1129810(70362068, +), CAediting_1129811(70362076, +), CAediting_1129812(70362081, +), CAediting_1129813(70362095, +), CAediting_1129814(70362116, +), CAediting_1129815(70362120, +), CAediting_1129816(70362198, +), CAediting_1129817(70362209, +), CAediting_1129818(70362217, +), CAediting_1129819(70362225, +), CAediting_1129820(70362229, +), CAediting_1129821(70362248, +), CAediting_1129822(70362252, +), CAediting_1129823(70362258, +), CAediting_1129824(70362266, +), CAediting_1129825(70362267, +), CAediting_1129826(70362272, +), CAediting_1129827(70362274, +), CAediting_1129828(70362278, +), CAediting_1129829(70362287, +), CAediting_1129830(70362291, +), CAediting_1129831(70362315, +), CAediting_1129832(70362324, +), CAediting_1129833(70362601, +), CAediting_1129834(70362622, +), CAediting_1129835(70362657, +), CAediting_1129836(70362664, +), CAediting_1129837(70362690, +), CAediting_1129838(70362695, +), CAediting_1129839(70362935, +), CAediting_1129840(70363086, +), CAediting_1129841(70363219, +), CAediting_1129842(70363254, +), CAediting_1129843(70363294, +), CAediting_1129844(70363534, +), CAediting_1129845(70363587, +), CAediting_1129846(70363597, +), CAediting_1129847(70363791, +), CAediting_1129848(70363833, +), CAediting_1129849(70363857, +), CAediting_1129850(70363866, +), CAediting_1129851(70363874, +), CAediting_1129852(70363879, +), CAediting_1129853(70363881, +), CAediting_1129854(70363946, +), CAediting_1129855(70365525, +), CAediting_1129856(70365659, +), CAediting_1129857(70365682, +), CAediting_1129858(70365701, +), CAediting_1129859(70367898, +), CAediting_1129860(70367943, +), CAediting_1129861(70369879, +), CAediting_1129862(70370849, +), CAediting_1129863(70371014, +), CAediting_1129864(70371018, +), CAediting_1129865(70372940, +), CAediting_1129866(70372941, +), CAediting_1129867(70372975, +), CAediting_1129868(70372977, +), CAediting_1129869(70372978, +), CAediting_1129870(70372986, +), CAediting_1129871(70372994, +), CAediting_1129872(70373000, +), CAediting_1129873(70373018, +), CAediting_1129874(70373023, +), CAediting_1129875(70373047, +), CAediting_1129876(70373049, +), CAediting_1129877(70373052, +), CAediting_1129878(70373057, +), CAediting_1129879(70373068, +), CAediting_1129880(70373074, +), CAediting_1129881(70373089, +), CAediting_1129882(70373115, +), CAediting_1129883(70373125, +), CAediting_1129884(70373132, +), CAediting_1129885(70373138, +), CAediting_1129886(70373156, +), CAediting_1129887(70373178, +), CAediting_1129888(70373184, +), CAediting_1129889(70373185, +), CAediting_1129890(70373193, +), CAediting_1129891(70373217, +), CAediting_1129892(70373244, +),

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RNA editing positional annotations for DDX19A using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1129724chr16_70300254_+ncRNA_intronic
CAediting_1129725chr16_70306172_+ncRNA_intronic
CAediting_1129726chr16_70306183_+ncRNA_intronic
CAediting_1129727chr16_70307424_+ncRNA_intronic
CAediting_1129728chr16_70307427_+ncRNA_intronic
CAediting_1129729chr16_70307463_+ncRNA_intronic
CAediting_1129730chr16_70307492_+ncRNA_intronic
CAediting_1129731chr16_70307502_+ncRNA_intronic
CAediting_1129732chr16_70307504_+ncRNA_intronic
CAediting_1129733chr16_70307508_+ncRNA_intronic
CAediting_1129734chr16_70307628_+ncRNA_intronic
CAediting_1129735chr16_70307631_+ncRNA_intronic
CAediting_1129736chr16_70308765_+ncRNA_intronic
CAediting_1129737chr16_70309636_+ncRNA_intronic
CAediting_1129738chr16_70309697_+ncRNA_intronic
CAediting_1129739chr16_70309698_+ncRNA_intronic
CAediting_1129740chr16_70309724_+ncRNA_intronic
CAediting_1129741chr16_70309739_+ncRNA_intronic
CAediting_1129742chr16_70309743_+ncRNA_intronic
CAediting_1129743chr16_70309775_+ncRNA_intronic
CAediting_1129744chr16_70309982_+ncRNA_intronic
CAediting_1129745chr16_70310043_+ncRNA_intronic
CAediting_1129746chr16_70310284_+ncRNA_intronic
CAediting_1129747chr16_70311343_+ncRNA_intronic
CAediting_1129748chr16_70312982_+ncRNA_intronic
CAediting_1129749chr16_70313854_+ncRNA_intronic
CAediting_1129750chr16_70313871_+ncRNA_intronic
CAediting_1129751chr16_70313989_+ncRNA_intronic
CAediting_1129752chr16_70348444_+ncRNA_intronic
CAediting_1129753chr16_70348465_+ncRNA_intronic
CAediting_1129754chr16_70348520_+ncRNA_intronic
CAediting_1129755chr16_70348539_+ncRNA_intronic
CAediting_1129756chr16_70348568_+ncRNA_intronic
CAediting_1129757chr16_70348577_+ncRNA_intronic
CAediting_1129758chr16_70348578_+ncRNA_intronic
CAediting_1129759chr16_70348684_+ncRNA_intronic
CAediting_1129760chr16_70348702_+ncRNA_intronic
CAediting_1129761chr16_70348720_+ncRNA_intronic
CAediting_1129762chr16_70348730_+ncRNA_intronic
CAediting_1129763chr16_70357583_+ncRNA_intronic
CAediting_1129764chr16_70357660_+ncRNA_intronic
CAediting_1129765chr16_70358211_+ncRNA_intronic
CAediting_1129766chr16_70358561_+ncRNA_intronic
CAediting_1129767chr16_70359600_+ncRNA_intronic
CAediting_1129768chr16_70359601_+ncRNA_intronic
CAediting_1129769chr16_70359622_+ncRNA_intronic
CAediting_1129770chr16_70359623_+ncRNA_intronic
CAediting_1129771chr16_70359649_+ncRNA_intronic
CAediting_1129772chr16_70359654_+ncRNA_intronic
CAediting_1129773chr16_70359660_+ncRNA_intronic
CAediting_1129774chr16_70359669_+ncRNA_intronic
CAediting_1129775chr16_70359670_+ncRNA_intronic
CAediting_1129776chr16_70359706_+ncRNA_intronic
CAediting_1129777chr16_70360017_+ncRNA_intronic
CAediting_1129778chr16_70360025_+ncRNA_intronic
CAediting_1129779chr16_70360026_+ncRNA_intronic
CAediting_1129780chr16_70360052_+ncRNA_intronic
CAediting_1129781chr16_70360531_+ncRNA_intronic
CAediting_1129782chr16_70360539_+ncRNA_intronic
CAediting_1129783chr16_70360783_+ncRNA_exonic
CAediting_1129784chr16_70360864_+ncRNA_exonic
CAediting_1129785chr16_70360881_+ncRNA_intronic
CAediting_1129786chr16_70360926_+ncRNA_intronic
CAediting_1129787chr16_70360940_+ncRNA_intronic
CAediting_1129788chr16_70360952_+ncRNA_intronic
CAediting_1129789chr16_70361023_+ncRNA_intronic
CAediting_1129790chr16_70361782_+ncRNA_intronic
CAediting_1129791chr16_70361790_+ncRNA_intronic
CAediting_1129792chr16_70361830_+ncRNA_intronic
CAediting_1129793chr16_70361850_+ncRNA_intronic
CAediting_1129794chr16_70361851_+ncRNA_intronic
CAediting_1129795chr16_70361858_+ncRNA_intronic
CAediting_1129796chr16_70361872_+ncRNA_intronic
CAediting_1129797chr16_70361875_+ncRNA_intronic
CAediting_1129798chr16_70361886_+ncRNA_intronic
CAediting_1129799chr16_70361889_+ncRNA_intronic
CAediting_1129800chr16_70361909_+ncRNA_intronic
CAediting_1129801chr16_70361915_+ncRNA_intronic
CAediting_1129802chr16_70361916_+ncRNA_intronic
CAediting_1129803chr16_70361937_+ncRNA_intronic
CAediting_1129804chr16_70361938_+ncRNA_intronic
CAediting_1129805chr16_70361965_+ncRNA_intronic
CAediting_1129806chr16_70361975_+ncRNA_intronic
CAediting_1129807chr16_70361987_+ncRNA_intronic
CAediting_1129808chr16_70362060_+ncRNA_intronic
CAediting_1129809chr16_70362064_+ncRNA_intronic
CAediting_1129810chr16_70362068_+ncRNA_intronic
CAediting_1129811chr16_70362076_+ncRNA_intronic
CAediting_1129812chr16_70362081_+ncRNA_intronic
CAediting_1129813chr16_70362095_+ncRNA_intronic
CAediting_1129814chr16_70362116_+ncRNA_intronic
CAediting_1129815chr16_70362120_+ncRNA_intronic
CAediting_1129816chr16_70362198_+ncRNA_intronic
CAediting_1129817chr16_70362209_+ncRNA_intronic
CAediting_1129818chr16_70362217_+ncRNA_intronic
CAediting_1129819chr16_70362225_+ncRNA_intronic
CAediting_1129820chr16_70362229_+ncRNA_intronic
CAediting_1129821chr16_70362248_+ncRNA_intronic
CAediting_1129822chr16_70362252_+ncRNA_intronic
CAediting_1129823chr16_70362258_+ncRNA_intronic
CAediting_1129824chr16_70362266_+ncRNA_intronic
CAediting_1129825chr16_70362267_+ncRNA_intronic
CAediting_1129826chr16_70362272_+ncRNA_intronic
CAediting_1129827chr16_70362274_+ncRNA_intronic
CAediting_1129828chr16_70362278_+ncRNA_intronic
CAediting_1129829chr16_70362287_+ncRNA_intronic
CAediting_1129830chr16_70362291_+ncRNA_intronic
CAediting_1129831chr16_70362315_+ncRNA_intronic
CAediting_1129832chr16_70362324_+ncRNA_intronic
CAediting_1129833chr16_70362601_+ncRNA_intronic
CAediting_1129834chr16_70362622_+ncRNA_intronic
CAediting_1129835chr16_70362657_+ncRNA_intronic
CAediting_1129836chr16_70362664_+ncRNA_intronic
CAediting_1129837chr16_70362690_+ncRNA_intronic
CAediting_1129838chr16_70362695_+ncRNA_intronic
CAediting_1129839chr16_70362935_+ncRNA_intronic
CAediting_1129840chr16_70363086_+ncRNA_intronic
CAediting_1129841chr16_70363219_+ncRNA_intronic
CAediting_1129842chr16_70363254_+ncRNA_intronic
CAediting_1129843chr16_70363294_+ncRNA_intronic
CAediting_1129844chr16_70363534_+ncRNA_exonic
CAediting_1129845chr16_70363587_+ncRNA_exonic
CAediting_1129846chr16_70363597_+ncRNA_exonic
CAediting_1129847chr16_70363791_+ncRNA_exonic
CAediting_1129848chr16_70363833_+ncRNA_exonic
CAediting_1129849chr16_70363857_+ncRNA_exonic
CAediting_1129850chr16_70363866_+ncRNA_exonic
CAediting_1129851chr16_70363874_+ncRNA_exonic
CAediting_1129852chr16_70363879_+ncRNA_exonic
CAediting_1129853chr16_70363881_+ncRNA_exonic
CAediting_1129854chr16_70363946_+ncRNA_exonic
CAediting_1129855chr16_70365525_+ncRNA_exonic
CAediting_1129856chr16_70365659_+ncRNA_exonic
CAediting_1129857chr16_70365682_+ncRNA_exonic
CAediting_1129858chr16_70365701_+ncRNA_exonic
CAediting_1129859chr16_70367898_+ncRNA_intronic
CAediting_1129860chr16_70367943_+ncRNA_intronic
CAediting_1129861chr16_70369879_+ncRNA_intronic
CAediting_1129862chr16_70370849_+ncRNA_exonic
CAediting_1129863chr16_70371014_+ncRNA_exonic
CAediting_1129864chr16_70371018_+ncRNA_exonic
CAediting_1129865chr16_70372940_+ncRNA_exonic
CAediting_1129866chr16_70372941_+ncRNA_exonic
CAediting_1129867chr16_70372975_+ncRNA_exonic
CAediting_1129868chr16_70372977_+ncRNA_exonic
CAediting_1129869chr16_70372978_+ncRNA_exonic
CAediting_1129870chr16_70372986_+ncRNA_exonic
CAediting_1129871chr16_70372994_+ncRNA_exonic
CAediting_1129872chr16_70373000_+ncRNA_exonic
CAediting_1129873chr16_70373018_+ncRNA_exonic
CAediting_1129874chr16_70373023_+ncRNA_exonic
CAediting_1129875chr16_70373047_+ncRNA_exonic
CAediting_1129876chr16_70373049_+ncRNA_exonic
CAediting_1129877chr16_70373052_+ncRNA_exonic
CAediting_1129878chr16_70373057_+ncRNA_exonic
CAediting_1129879chr16_70373068_+ncRNA_exonic
CAediting_1129880chr16_70373074_+ncRNA_exonic
CAediting_1129881chr16_70373089_+ncRNA_exonic
CAediting_1129882chr16_70373115_+ncRNA_exonic
CAediting_1129883chr16_70373125_+ncRNA_exonic
CAediting_1129884chr16_70373132_+ncRNA_exonic
CAediting_1129885chr16_70373138_+ncRNA_exonic
CAediting_1129886chr16_70373156_+ncRNA_exonic
CAediting_1129887chr16_70373178_+ncRNA_exonic
CAediting_1129888chr16_70373184_+ncRNA_exonic
CAediting_1129889chr16_70373185_+ncRNA_exonic
CAediting_1129890chr16_70373193_+ncRNA_exonic
CAediting_1129891chr16_70373217_+ncRNA_exonic
CAediting_1129892chr16_70373244_+ncRNA_exonic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1129724chr16_70300254_+SINEAluAluJb
CAediting_1129725chr16_70306172_+SINEAluAluJb
CAediting_1129726chr16_70306183_+SINEAluAluJb
CAediting_1129727chr16_70307424_+SINEAluAluSx
CAediting_1129728chr16_70307427_+SINEAluAluSx
CAediting_1129729chr16_70307463_+SINEAluAluSx
CAediting_1129730chr16_70307492_+SINEAluAluSx
CAediting_1129731chr16_70307502_+SINEAluAluSx
CAediting_1129732chr16_70307504_+SINEAluAluSx
CAediting_1129733chr16_70307508_+SINEAluAluSx
CAediting_1129734chr16_70307628_+SINEAluAluSx
CAediting_1129735chr16_70307631_+SINEAluAluSx
CAediting_1129736chr16_70308765_+SINEAluAluJr4
CAediting_1129737chr16_70309636_+SINEAluAluSg
CAediting_1129738chr16_70309697_+SINEAluAluSg
CAediting_1129739chr16_70309698_+SINEAluAluSg
CAediting_1129740chr16_70309724_+SINEAluAluSg
CAediting_1129741chr16_70309739_+SINEAluAluSg
CAediting_1129742chr16_70309743_+SINEAluAluSg
CAediting_1129743chr16_70309775_+SINEAluAluSg
CAediting_1129744chr16_70309982_+SINEAluAluJo
CAediting_1129745chr16_70310043_+SINEAluAluJo
CAediting_1129746chr16_70310284_+SINEAluAluSc
CAediting_1129747chr16_70311343_+SINEAluAluY
CAediting_1129748chr16_70312982_+SINEAluAluJo
CAediting_1129749chr16_70313854_+SINEAluAluSx
CAediting_1129750chr16_70313871_+SINEAluAluSx
CAediting_1129751chr16_70313989_+SINEAluAluSx
CAediting_1129752chr16_70348444_+SINEAluAluSx1
CAediting_1129753chr16_70348465_+SINEAluAluSx1
CAediting_1129754chr16_70348520_+SINEAluAluSx1
CAediting_1129755chr16_70348539_+SINEAluAluSx1
CAediting_1129756chr16_70348568_+SINEAluAluSx1
CAediting_1129757chr16_70348577_+SINEAluAluSx1
CAediting_1129758chr16_70348578_+SINEAluAluSx1
CAediting_1129759chr16_70348684_+SINEAluAluJb
CAediting_1129760chr16_70348702_+SINEAluAluJb
CAediting_1129761chr16_70348720_+SINEAluAluJb
CAediting_1129762chr16_70348730_+SINEAluAluJb
CAediting_1129763chr16_70357583_+SINEAluAluSg
CAediting_1129764chr16_70357660_+SINEAluAluSg
CAediting_1129765chr16_70358211_+SINEAluAluSz6
CAediting_1129767chr16_70359600_+SINEAluAluJb
CAediting_1129768chr16_70359601_+SINEAluAluJb
CAediting_1129769chr16_70359622_+SINEAluAluJb
CAediting_1129770chr16_70359623_+SINEAluAluJb
CAediting_1129771chr16_70359649_+SINEAluAluJb
CAediting_1129772chr16_70359654_+SINEAluAluJb
CAediting_1129773chr16_70359660_+SINEAluAluJb
CAediting_1129774chr16_70359669_+SINEAluAluJb
CAediting_1129775chr16_70359670_+SINEAluAluJb
CAediting_1129776chr16_70359706_+SINEAluAluJb
CAediting_1129777chr16_70360017_+SINEAluAluSx
CAediting_1129778chr16_70360025_+SINEAluAluSx
CAediting_1129779chr16_70360026_+SINEAluAluSx
CAediting_1129780chr16_70360052_+SINEAluAluSx
CAediting_1129781chr16_70360531_+SINEAluAluJr4
CAediting_1129782chr16_70360539_+SINEAluAluJr4
CAediting_1129783chr16_70360783_+SINEAluAluJb
CAediting_1129784chr16_70360864_+SINEAluAluJb
CAediting_1129785chr16_70360881_+SINEAluAluJb
CAediting_1129786chr16_70360926_+SINEAluAluJb
CAediting_1129787chr16_70360940_+SINEAluAluJb
CAediting_1129788chr16_70360952_+SINEAluAluJb
CAediting_1129789chr16_70361023_+SINEAluAluJb
CAediting_1129790chr16_70361782_+SINEAluAluSx
CAediting_1129791chr16_70361790_+SINEAluAluSx
CAediting_1129792chr16_70361830_+SINEAluAluSx
CAediting_1129793chr16_70361850_+SINEAluAluSx
CAediting_1129794chr16_70361851_+SINEAluAluSx
CAediting_1129795chr16_70361858_+SINEAluAluSx
CAediting_1129796chr16_70361872_+SINEAluAluSx
CAediting_1129797chr16_70361875_+SINEAluAluSx
CAediting_1129798chr16_70361886_+SINEAluAluSx
CAediting_1129799chr16_70361889_+SINEAluAluSx
CAediting_1129800chr16_70361909_+SINEAluAluSx
CAediting_1129801chr16_70361915_+SINEAluAluSx
CAediting_1129802chr16_70361916_+SINEAluAluSx
CAediting_1129803chr16_70361937_+SINEAluAluSx
CAediting_1129804chr16_70361938_+SINEAluAluSx
CAediting_1129805chr16_70361965_+SINEAluAluSx
CAediting_1129806chr16_70361975_+SINEAluAluSx
CAediting_1129807chr16_70361987_+SINEAluAluSx
CAediting_1129808chr16_70362060_+SINEAluAluSx
CAediting_1129809chr16_70362064_+SINEAluAluSx
CAediting_1129810chr16_70362068_+SINEAluAluSx
CAediting_1129811chr16_70362076_+SINEAluAluSx
CAediting_1129812chr16_70362081_+SINEAluAluSx
CAediting_1129813chr16_70362095_+SINEAluAluSx
CAediting_1129814chr16_70362116_+SINEAluAluSx
CAediting_1129815chr16_70362120_+SINEAluAluSx
CAediting_1129816chr16_70362198_+SINEAluAluSx
CAediting_1129817chr16_70362209_+SINEAluAluSx
CAediting_1129818chr16_70362217_+SINEAluAluSx
CAediting_1129819chr16_70362225_+SINEAluAluSx
CAediting_1129820chr16_70362229_+SINEAluAluSx
CAediting_1129821chr16_70362248_+SINEAluAluSx
CAediting_1129822chr16_70362252_+SINEAluAluSx
CAediting_1129823chr16_70362258_+SINEAluAluSx
CAediting_1129824chr16_70362266_+SINEAluAluSx
CAediting_1129825chr16_70362267_+SINEAluAluSx
CAediting_1129826chr16_70362272_+SINEAluAluSx
CAediting_1129827chr16_70362274_+SINEAluAluSx
CAediting_1129828chr16_70362278_+SINEAluAluSx
CAediting_1129829chr16_70362287_+SINEAluAluSx
CAediting_1129830chr16_70362291_+SINEAluAluSx
CAediting_1129831chr16_70362315_+SINEAluAluSx
CAediting_1129832chr16_70362324_+SINEAluAluSx
CAediting_1129833chr16_70362601_+SINEAluAluJr
CAediting_1129834chr16_70362622_+SINEAluAluJr
CAediting_1129835chr16_70362657_+SINEAluAluJr
CAediting_1129836chr16_70362664_+SINEAluAluJr
CAediting_1129837chr16_70362690_+SINEAluAluJr
CAediting_1129838chr16_70362695_+SINEAluAluJr
CAediting_1129839chr16_70362935_+SINEAluAluSz
CAediting_1129840chr16_70363086_+SINEAluAluJr
CAediting_1129841chr16_70363219_+SINEAluAluSz
CAediting_1129842chr16_70363254_+SINEAluAluSz
CAediting_1129843chr16_70363294_+SINEAluAluSz
CAediting_1129844chr16_70363534_+SINEAluAluSg
CAediting_1129845chr16_70363587_+SINEAluAluSg
CAediting_1129846chr16_70363597_+SINEAluAluSg
CAediting_1129847chr16_70363791_+SINEAluAluY
CAediting_1129848chr16_70363833_+SINEAluAluY
CAediting_1129849chr16_70363857_+SINEAluAluY
CAediting_1129850chr16_70363866_+SINEAluAluY
CAediting_1129851chr16_70363874_+SINEAluAluY
CAediting_1129852chr16_70363879_+SINEAluAluY
CAediting_1129853chr16_70363881_+SINEAluAluY
CAediting_1129854chr16_70363946_+SINEAluAluY
CAediting_1129855chr16_70365525_+SINEAluAluJb
CAediting_1129856chr16_70365659_+SINEAluAluJb
CAediting_1129857chr16_70365682_+SINEAluAluJb
CAediting_1129858chr16_70365701_+SINEAluAluJb
CAediting_1129859chr16_70367898_+SINEAluAluJo
CAediting_1129860chr16_70367943_+SINEAluAluJo
CAediting_1129861chr16_70369879_+SINEAluAluJb
CAediting_1129862chr16_70370849_+SINEAluAluSp
CAediting_1129863chr16_70371014_+SINEAluAluSp
CAediting_1129864chr16_70371018_+SINEAluAluSp
CAediting_1129867chr16_70372975_+SINEAluAluJb
CAediting_1129868chr16_70372977_+SINEAluAluJb
CAediting_1129869chr16_70372978_+SINEAluAluJb
CAediting_1129870chr16_70372986_+SINEAluAluJb
CAediting_1129871chr16_70372994_+SINEAluAluJb
CAediting_1129872chr16_70373000_+SINEAluAluJb
CAediting_1129873chr16_70373018_+SINEAluAluJb
CAediting_1129874chr16_70373023_+SINEAluAluJb
CAediting_1129875chr16_70373047_+SINEAluAluJb
CAediting_1129876chr16_70373049_+SINEAluAluJb
CAediting_1129877chr16_70373052_+SINEAluAluJb
CAediting_1129878chr16_70373057_+SINEAluAluJb
CAediting_1129879chr16_70373068_+SINEAluAluJb
CAediting_1129880chr16_70373074_+SINEAluAluJb
CAediting_1129881chr16_70373089_+SINEAluAluJb
CAediting_1129882chr16_70373115_+SINEAluAluJb
CAediting_1129883chr16_70373125_+SINEAluAluJb
CAediting_1129884chr16_70373132_+SINEAluAluJb
CAediting_1129885chr16_70373138_+SINEAluAluJb
CAediting_1129886chr16_70373156_+SINEAluAluJb
CAediting_1129887chr16_70373178_+SINEAluAluJb
CAediting_1129888chr16_70373184_+SINEAluAluJb
CAediting_1129889chr16_70373185_+SINEAluAluJb
CAediting_1129890chr16_70373193_+SINEAluAluJb
CAediting_1129891chr16_70373217_+SINEAluAluJb
CAediting_1129892chr16_70373244_+SINEAluAluJb

Top

RNA A-to-I editing events in the alternative splicing sites for DDX19A

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000168872.14.DDX19A.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000168872.14.DDX19A.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for DDX19A

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for DDX19A

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for DDX19A

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1129867chr16_70372975_+ENSG00000168872.14ENST00000569771hsa-miR-10399-5p70372972703729787mer-m87037295870372979144.00-10.26
CAediting_1129867chr16_70372975_+ENSG00000168872.14ENST00000569771hsa-miR-6504-3p70372972703729787mer-m87037295870372979156.00-16.06
CAediting_1129867chr16_70372975_+ENSG00000168872.14ENST00000569771hsa-miR-7151-3p70372970703729778mer-1a7037296170372977146.00-17.62
CAediting_1129867chr16_70372975_+ENSG00000168872.14ENST00000302243hsa-miR-10399-5p70372972703729787mer-m87037295870372979144.00-10.26
CAediting_1129867chr16_70372975_+ENSG00000168872.14ENST00000302243hsa-miR-6504-3p70372972703729787mer-m87037295870372979156.00-16.06
CAediting_1129867chr16_70372975_+ENSG00000168872.14ENST00000302243hsa-miR-7151-3p70372970703729778mer-1a7037296170372977146.00-17.62
CAediting_1129869chr16_70372978_+ENSG00000168872.14ENST00000569771hsa-miR-625-3p70372972703729787mer-m87037295870372979140.00-14.64
CAediting_1129869chr16_70372978_+ENSG00000168872.14ENST00000569771hsa-miR-805270372976703729827mer-1a7037296470372982152.00-29.37
CAediting_1129869chr16_70372978_+ENSG00000168872.14ENST00000302243hsa-miR-625-3p70372972703729787mer-m87037295870372979140.00-14.64
CAediting_1129869chr16_70372978_+ENSG00000168872.14ENST00000302243hsa-miR-805270372976703729827mer-1a7037296470372982152.00-29.37
CAediting_1129882chr16_70373115_+ENSG00000168872.14ENST00000569771hsa-miR-140-3p70373110703731167mer-m87037309770373117156.00-23.53
CAediting_1129882chr16_70373115_+ENSG00000168872.14ENST00000302243hsa-miR-140-3p70373110703731167mer-m87037309770373117156.00-23.53
CAediting_1129784chr16_70360864_+ENSG00000168872.14ENST00000566167hsa-miR-6765-5p70360862703608687mer-m87036084570360869151.00-27.88
CAediting_1129785chr16_70360881_+ENSG00000168872.14ENST00000566167hsa-miR-4704-3p70360878703608847mer-m87036086770360885144.00-14.45
CAediting_1129785chr16_70360881_+ENSG00000168872.14ENST00000566167hsa-miR-668-3p70360876703608827mer-m87036086170360883142.00-17.82
CAediting_1129865chr16_70372940_+ENSG00000168872.14ENST00000569771hsa-miR-6758-3p70372935703729417mer-m87037292270372942147.00-9.36
CAediting_1129865chr16_70372940_+ENSG00000168872.14ENST00000302243hsa-miR-6758-3p70372935703729417mer-m87037292270372942147.00-9.36
CAediting_1129866chr16_70372941_+ENSG00000168872.14ENST00000569771hsa-miR-6883-3p70372937703729437mer-m87037292470372944146.00-11.77
CAediting_1129866chr16_70372941_+ENSG00000168872.14ENST00000302243hsa-miR-6883-3p70372937703729437mer-m87037292470372944146.00-11.77
CAediting_1129868chr16_70372977_+ENSG00000168872.14ENST00000569771hsa-miR-63870372976703729827mer-1a7037295870372982147.00-29.45
CAediting_1129868chr16_70372977_+ENSG00000168872.14ENST00000302243hsa-miR-63870372976703729827mer-1a7037295870372982147.00-29.45
CAediting_1129870chr16_70372986_+ENSG00000168872.14ENST00000569771hsa-miR-523-3p70372983703729897mer-m87037296970372990151.00-19.17
CAediting_1129870chr16_70372986_+ENSG00000168872.14ENST00000302243hsa-miR-523-3p70372983703729897mer-m87037296970372990151.00-19.17
CAediting_1129871chr16_70372994_+ENSG00000168872.14ENST00000569771hsa-miR-394370372991703729977mer-m87037297770372998151.00-22.35
CAediting_1129871chr16_70372994_+ENSG00000168872.14ENST00000569771hsa-miR-6793-3p70372987703729937mer-m87037297570372994140.00-17.42
CAediting_1129871chr16_70372994_+ENSG00000168872.14ENST00000302243hsa-miR-394370372991703729977mer-m87037297770372998151.00-22.35
CAediting_1129871chr16_70372994_+ENSG00000168872.14ENST00000302243hsa-miR-6793-3p70372987703729937mer-m87037297570372994140.00-17.42
CAediting_1129872chr16_70373000_+ENSG00000168872.14ENST00000569771hsa-miR-6849-3p70372993703729997mer-m87037298170373000141.00-17.05
CAediting_1129872chr16_70373000_+ENSG00000168872.14ENST00000302243hsa-miR-6849-3p70372993703729997mer-m87037298170373000141.00-17.05
CAediting_1129876chr16_70373049_+ENSG00000168872.14ENST00000569771hsa-miR-1306-3p70373042703730487mer-m87037303270373049152.00-23.71
CAediting_1129876chr16_70373049_+ENSG00000168872.14ENST00000302243hsa-miR-1306-3p70373042703730487mer-m87037303270373049152.00-23.71
CAediting_1129877chr16_70373052_+ENSG00000168872.14ENST00000569771hsa-miR-4716-5p70373045703730517mer-m87037303170373052140.00-11.88
CAediting_1129877chr16_70373052_+ENSG00000168872.14ENST00000302243hsa-miR-4716-5p70373045703730517mer-m87037303170373052140.00-11.88
CAediting_1129878chr16_70373057_+ENSG00000168872.14ENST00000569771hsa-miR-450870373055703730617mer-m87037304670373062140.00-19.58
CAediting_1129878chr16_70373057_+ENSG00000168872.14ENST00000302243hsa-miR-450870373055703730617mer-m87037304670373062140.00-19.58
CAediting_1129880chr16_70373074_+ENSG00000168872.14ENST00000569771hsa-miR-9-5p70373067703730748mer-1a7037305270373074140.00-11.82
CAediting_1129880chr16_70373074_+ENSG00000168872.14ENST00000569771hsa-miR-9-5p70373067703730748mer-1a7037305270373074140.00-11.82
CAediting_1129880chr16_70373074_+ENSG00000168872.14ENST00000569771hsa-miR-9-5p70373067703730748mer-1a7037305270373074140.00-11.82
CAediting_1129880chr16_70373074_+ENSG00000168872.14ENST00000302243hsa-miR-9-5p70373067703730748mer-1a7037305270373074140.00-11.82
CAediting_1129880chr16_70373074_+ENSG00000168872.14ENST00000302243hsa-miR-9-5p70373067703730748mer-1a7037305270373074140.00-11.82
CAediting_1129880chr16_70373074_+ENSG00000168872.14ENST00000302243hsa-miR-9-5p70373067703730748mer-1a7037305270373074140.00-11.82
CAediting_1129883chr16_70373125_+ENSG00000168872.14ENST00000569771hsa-miR-1207-3p70373118703731247mer-m87037310770373125145.00-13.53
CAediting_1129883chr16_70373125_+ENSG00000168872.14ENST00000569771hsa-miR-64670373120703731267mer-m87037310870373127148.00-21.05
CAediting_1129883chr16_70373125_+ENSG00000168872.14ENST00000302243hsa-miR-1207-3p70373118703731247mer-m87037310770373125145.00-13.53
CAediting_1129883chr16_70373125_+ENSG00000168872.14ENST00000302243hsa-miR-64670373120703731267mer-m87037310870373127148.00-21.05
CAediting_1129884chr16_70373132_+ENSG00000168872.14ENST00000569771hsa-miR-394370373129703731357mer-m87037311670373136150.00-22.28
CAediting_1129884chr16_70373132_+ENSG00000168872.14ENST00000302243hsa-miR-394370373129703731357mer-m87037311670373136150.00-22.28
CAediting_1129885chr16_70373138_+ENSG00000168872.14ENST00000569771hsa-miR-6849-3p70373131703731377mer-m87037311770373138140.00-15.93
CAediting_1129885chr16_70373138_+ENSG00000168872.14ENST00000302243hsa-miR-6849-3p70373131703731377mer-m87037311770373138140.00-15.93
CAediting_1129886chr16_70373156_+ENSG00000168872.14ENST00000569771hsa-miR-3136-3p70373152703731587mer-m87037313870373159160.00-16.55
CAediting_1129886chr16_70373156_+ENSG00000168872.14ENST00000569771hsa-miR-4747-3p70373154703731596mer7037313970373160159.00-32.39
CAediting_1129886chr16_70373156_+ENSG00000168872.14ENST00000569771hsa-miR-7155-3p70373152703731587mer-m87037313870373159148.00-28.38
CAediting_1129886chr16_70373156_+ENSG00000168872.14ENST00000302243hsa-miR-3136-3p70373152703731587mer-m87037313870373159160.00-16.55
CAediting_1129886chr16_70373156_+ENSG00000168872.14ENST00000302243hsa-miR-4747-3p70373154703731596mer7037313970373160159.00-32.39
CAediting_1129886chr16_70373156_+ENSG00000168872.14ENST00000302243hsa-miR-7155-3p70373152703731587mer-m87037313870373159148.00-28.38
CAediting_1129887chr16_70373178_+ENSG00000168872.14ENST00000569771hsa-miR-4690-3p70373175703731828mer-1a7037316370373182161.00-28.72
CAediting_1129887chr16_70373178_+ENSG00000168872.14ENST00000569771hsa-miR-568570373175703731828mer-1a7037315970373182154.00-22.13
CAediting_1129887chr16_70373178_+ENSG00000168872.14ENST00000302243hsa-miR-4690-3p70373175703731828mer-1a7037316370373182161.00-28.72
CAediting_1129887chr16_70373178_+ENSG00000168872.14ENST00000302243hsa-miR-568570373175703731828mer-1a7037315970373182154.00-22.13
CAediting_1129892chr16_70373244_+ENSG00000168872.14ENST00000569771hsa-miR-569670373238703732447mer-m87037322470373245148.00-11.00
CAediting_1129892chr16_70373244_+ENSG00000168872.14ENST00000302243hsa-miR-569670373238703732447mer-m87037322470373245148.00-11.00
CAediting_1129888chr16_70373184_+ENSG00000168872.14ENST00000569771hsa-miR-6787-3p70373177703731848mer-1a7037316070373184158.00-27.47
CAediting_1129888chr16_70373184_+ENSG00000168872.14ENST00000302243hsa-miR-6787-3p70373177703731848mer-1a7037316070373184158.00-27.47
CAediting_1129891chr16_70373217_+ENSG00000168872.14ENST00000569771hsa-miR-6726-3p70373214703732207mer-m87037320070373221161.00-30.65
CAediting_1129891chr16_70373217_+ENSG00000168872.14ENST00000302243hsa-miR-6726-3p70373214703732207mer-m87037320070373221161.00-30.65

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1129865chr16_70372940_+ENSG00000168872.14ENST00000569771hsa-miR-1212370372933703729408mer-1a7037291970372940140-6.48
CAediting_1129871chr16_70372994_+ENSG00000168872.14ENST00000569771hsa-miR-150-5p70372988703729947mer-m87037297470372995145-16.79
CAediting_1129878chr16_70373057_+ENSG00000168872.14ENST00000569771hsa-miR-193b-5p70373054703730607mer-m87037304070373061142-20.42
CAediting_1129888chr16_70373184_+ENSG00000168872.14ENST00000569771hsa-miR-205-3p70373179703731857mer-m87037316670373186147-9.93
CAediting_1129889chr16_70373185_+ENSG00000168872.14ENST00000569771hsa-miR-205-3p70373179703731857mer-m87037316670373186147-9.93
CAediting_1129886chr16_70373156_+ENSG00000168872.14ENST00000569771hsa-miR-3155a70373154703731607mer-m87037314070373161141-24.95
CAediting_1129886chr16_70373156_+ENSG00000168872.14ENST00000569771hsa-miR-3155b70373154703731607mer-m87037314370373161141-22.98
CAediting_1129879chr16_70373068_+ENSG00000168872.14ENST00000569771hsa-miR-445170373063703730708mer-1a7037305470373070150-19.09
CAediting_1129885chr16_70373138_+ENSG00000168872.14ENST00000569771hsa-miR-4777-3p70373135703731417mer-m87037311770373142154-19.06
CAediting_1129875chr16_70373047_+ENSG00000168872.14ENST00000569771hsa-miR-4781-3p70373043703730497mer-m87037303270373050144-13.86
CAediting_1129876chr16_70373049_+ENSG00000168872.14ENST00000569771hsa-miR-4781-3p70373043703730497mer-m87037303270373050144-13.86
CAediting_1129869chr16_70372978_+ENSG00000168872.14ENST00000569771hsa-miR-5089-5p70372976703729827mer-m87037296170372983144-13.6
CAediting_1129890chr16_70373193_+ENSG00000168872.14ENST00000569771hsa-miR-569370373189703731957mer-m87037317570373196144-17.59
CAediting_1129871chr16_70372994_+ENSG00000168872.14ENST00000569771hsa-miR-6778-3p70372990703729967mer-m87037297870372997146-16.31
CAediting_1129884chr16_70373132_+ENSG00000168872.14ENST00000569771hsa-miR-6778-3p70373128703731347mer-m87037311670373135141-15.45
CAediting_1129879chr16_70373068_+ENSG00000168872.14ENST00000569771hsa-miR-6832-5p70373062703730687mer-m87037304770373069142-14.86
CAediting_1129882chr16_70373115_+ENSG00000168872.14ENST00000569771hsa-miR-7151-3p70373108703731147mer-m87037309170373115144-25.17
CAediting_1129873chr16_70373018_+ENSG00000168872.14ENST00000569771hsa-miR-7158-5p70373014703730196mer7037299470373020144-29.97
CAediting_1129876chr16_70373049_+ENSG00000168872.14ENST00000569771hsa-miR-96-3p70373046703730527mer-m87037303070373053142-14.3
CAediting_1129877chr16_70373052_+ENSG00000168872.14ENST00000569771hsa-miR-96-3p70373046703730527mer-m87037303070373053142-14.3
CAediting_1129784chr16_70360864_+ENSG00000168872.14ENST00000566167hsa-miR-30b-3p70360857703608637mer-m87036084370360864145-16.71
CAediting_1129784chr16_70360864_+ENSG00000168872.14ENST00000566167hsa-miR-3689a-3p70360857703608637mer-m87036084370360864142-17.63
CAediting_1129784chr16_70360864_+ENSG00000168872.14ENST00000566167hsa-miR-3689b-3p70360857703608637mer-m87036084570360864148-16.81
CAediting_1129784chr16_70360864_+ENSG00000168872.14ENST00000566167hsa-miR-3689c70360857703608637mer-m87036084570360864148-16.81
CAediting_1129784chr16_70360864_+ENSG00000168872.14ENST00000566167hsa-miR-613470360861703608688mer-1a7036085070360868154-21.29
CAediting_1129784chr16_70360864_+ENSG00000168872.14ENST00000566167hsa-miR-6778-5p70360858703608647mer-m87036084070360865150-29.98
CAediting_1129784chr16_70360864_+ENSG00000168872.14ENST00000566167hsa-miR-6779-5p70360857703608637mer-m87036084170360864146-22.21
CAediting_1129784chr16_70360864_+ENSG00000168872.14ENST00000566167hsa-miR-6780a-5p70360857703608637mer-m87036084270360864140-18.12
CAediting_1129785chr16_70360881_+ENSG00000168872.14ENST00000566167hsa-miR-93570360878703608847mer-m87036086370360885140-16.11
CAediting_1129865chr16_70372940_+ENSG00000168872.14ENST00000302243hsa-miR-1212370372933703729408mer-1a7037291970372940140-6.48
CAediting_1129871chr16_70372994_+ENSG00000168872.14ENST00000302243hsa-miR-150-5p70372988703729947mer-m87037297470372995145-16.79
CAediting_1129878chr16_70373057_+ENSG00000168872.14ENST00000302243hsa-miR-193b-5p70373054703730607mer-m87037304070373061142-20.42
CAediting_1129888chr16_70373184_+ENSG00000168872.14ENST00000302243hsa-miR-205-3p70373179703731857mer-m87037316670373186147-9.93
CAediting_1129889chr16_70373185_+ENSG00000168872.14ENST00000302243hsa-miR-205-3p70373179703731857mer-m87037316670373186147-9.93
CAediting_1129886chr16_70373156_+ENSG00000168872.14ENST00000302243hsa-miR-3155a70373154703731607mer-m87037314070373161141-24.95
CAediting_1129886chr16_70373156_+ENSG00000168872.14ENST00000302243hsa-miR-3155b70373154703731607mer-m87037314370373161141-22.98
CAediting_1129879chr16_70373068_+ENSG00000168872.14ENST00000302243hsa-miR-445170373063703730708mer-1a7037305470373070150-19.09
CAediting_1129885chr16_70373138_+ENSG00000168872.14ENST00000302243hsa-miR-4777-3p70373135703731417mer-m87037311770373142154-19.06
CAediting_1129875chr16_70373047_+ENSG00000168872.14ENST00000302243hsa-miR-4781-3p70373043703730497mer-m87037303270373050144-13.86
CAediting_1129876chr16_70373049_+ENSG00000168872.14ENST00000302243hsa-miR-4781-3p70373043703730497mer-m87037303270373050144-13.86
CAediting_1129869chr16_70372978_+ENSG00000168872.14ENST00000302243hsa-miR-5089-5p70372976703729827mer-m87037296170372983144-13.6
CAediting_1129890chr16_70373193_+ENSG00000168872.14ENST00000302243hsa-miR-569370373189703731957mer-m87037317570373196144-17.59
CAediting_1129871chr16_70372994_+ENSG00000168872.14ENST00000302243hsa-miR-6778-3p70372990703729967mer-m87037297870372997146-16.31
CAediting_1129884chr16_70373132_+ENSG00000168872.14ENST00000302243hsa-miR-6778-3p70373128703731347mer-m87037311670373135141-15.45
CAediting_1129879chr16_70373068_+ENSG00000168872.14ENST00000302243hsa-miR-6832-5p70373062703730687mer-m87037304770373069142-14.86
CAediting_1129882chr16_70373115_+ENSG00000168872.14ENST00000302243hsa-miR-7151-3p70373108703731147mer-m87037309170373115144-25.17
CAediting_1129873chr16_70373018_+ENSG00000168872.14ENST00000302243hsa-miR-7158-5p70373014703730196mer7037299470373020144-29.97
CAediting_1129876chr16_70373049_+ENSG00000168872.14ENST00000302243hsa-miR-96-3p70373046703730527mer-m87037303070373053142-14.3
CAediting_1129877chr16_70373052_+ENSG00000168872.14ENST00000302243hsa-miR-96-3p70373046703730527mer-m87037303070373053142-14.3

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1054808chr15_66496985_-ENSG00000168872.14ENST00000443119hsa-miR-451270372056703720627mer-m87037203870372063145-24.99
CAediting_1368054chr19_46709310_-ENSG00000168872.14ENST00000443119hsa-miR-320e70372309703723157mer-m87037229870372316146-15.21
CAediting_117844chr1_162342605_+ENSG00000168872.14ENST00000443119hsa-miR-556-3p70372160703721667mer-m87037214770372167150-15.41
CAediting_117844chr1_162342605_+ENSG00000168872.14ENST00000569771hsa-miR-556-3p70365121703651288mer-1a7036510670365128149-9.25
CAediting_1054808chr15_66496985_-ENSG00000168872.14ENST00000569771hsa-miR-451270372056703720627mer-m87037203870372063145-24.99
CAediting_1054808chr15_66496985_-ENSG00000168872.14ENST00000569771hsa-miR-451270372737703727437mer-m87037272370372744140-13.73
CAediting_1229414chr17_67471546_+ENSG00000168872.14ENST00000569771hsa-miR-548aa70372698703727047mer-m87037268070372705149-14.45
CAediting_1368054chr19_46709310_-ENSG00000168872.14ENST00000569771hsa-miR-320e70372309703723157mer-m87037229870372316146-15.21
CAediting_117844chr1_162342605_+ENSG00000168872.14ENST00000569771hsa-miR-556-3p70372160703721667mer-m87037214770372167150-15.41
CAediting_1054808chr15_66496985_-ENSG00000168872.14ENST00000302243hsa-miR-451270372056703720627mer-m87037203870372063145-24.99
CAediting_1054808chr15_66496985_-ENSG00000168872.14ENST00000302243hsa-miR-451270372737703727437mer-m87037272370372744140-13.73
CAediting_1229414chr17_67471546_+ENSG00000168872.14ENST00000302243hsa-miR-548aa70372698703727047mer-m87037268070372705149-14.45
CAediting_1368054chr19_46709310_-ENSG00000168872.14ENST00000302243hsa-miR-320e70372309703723157mer-m87037229870372316146-15.21
CAediting_117844chr1_162342605_+ENSG00000168872.14ENST00000302243hsa-miR-556-3p70372160703721667mer-m87037214770372167150-15.41
CAediting_117844chr1_162342605_+ENSG00000168872.14ENST00000569319hsa-miR-556-3p70365121703651288mer-1a7036510670365128149-9.25
CAediting_1229415chr17_67471547_+ENSG00000168872.14ENST00000569319hsa-miR-548aa70366037703660437mer-m87036602070366044140-12.51
CAediting_1054808chr15_66496985_-ENSG00000168872.14ENST00000569319hsa-miR-451270372056703720627mer-m87037203870372063145-24.99
CAediting_1054808chr15_66496985_-ENSG00000168872.14ENST00000417604hsa-miR-451270372056703720627mer-m87037203870372063145-24.99
CAediting_117844chr1_162342605_+ENSG00000168872.14ENST00000417604hsa-miR-556-3p70372160703721667mer-m87037214770372167150-15.41
CAediting_1054808chr15_66496985_-ENSG00000168872.14ENST00000575878hsa-miR-451270372056703720627mer-m87037203870372063145-24.99
CAediting_1368054chr19_46709310_-ENSG00000168872.14ENST00000575878hsa-miR-320e70372309703723157mer-m87037229870372316146-15.21
CAediting_117844chr1_162342605_+ENSG00000168872.14ENST00000575878hsa-miR-556-3p70372160703721667mer-m87037214770372167150-15.41

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network
boxplot

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The effects of the RNA editing to the stability of the RNA structures for DDX19A

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for DDX19A

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BLCACAediting_1129867chr16_70372975_+..0.001633988086982550.374882613095021..
LGGCAediting_1129867chr16_70372975_+0.008660834007150320.1267504036119985.96242925205575e-090.276521226495577..
BRCACAediting_1129867chr16_70372975_+0.0125512743004590.112014783533824....
LUADCAediting_1129867chr16_70372975_+0.004350705261084240.1969655886109....
GBMCAediting_1129867chr16_70372975_+0.03796208931671630.167411400646753....
PRADCAediting_1129867chr16_70372975_+..0.0004025119536170180.243695417949825..
STADCAediting_1129867chr16_70372975_+..2.33588101902737e-130.468677276384548..
UCECCAediting_1129867chr16_70372975_+..0.003285882965985910.206396599281994..
ESCACAediting_1129867chr16_70372975_+..0.01399588247774590.261127953771013..
PCPGCAediting_1129867chr16_70372975_+0.002922250863256520.242186707757524....
SKCMCAediting_1129867chr16_70372975_+..0.0003937970212422290.30292758912857..
SARCCAediting_1129867chr16_70372975_+0.005008644694818420.2515378464761810.005168141777954990.250660441843986..
BRCACAediting_1129869chr16_70372978_+0.04992959176723660.132052734996368....
PCPGCAediting_1129869chr16_70372978_+0.004403846416933420.279757650246636....

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Relation with cancer stages for DDX19A

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
LIHCpathologic_stageCAediting_1129869chr16_70372978_+0.02895940272647230.259348588670567

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Relation with survival for DDX19A

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for DDX19A

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for DDX19A

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource